Cow genome map

Conread name: Ss1.1-rthg26_l18.5

Conread position: 9-365
Cow position:
Alignm length: 372
Alignm identity: 239
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 65, 56

Conread position: 9-409
Cow position:
Alignm length: 443
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 379

Conread position: 11-309
Cow position:
Alignm length: 323
Alignm identity: 229
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 36, 169

Conread position: 11-405
Cow position:
Alignm length: 422
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 191

Conread position: 11-406
Cow position:
Alignm length: 420
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 186

Conread position: 11-407
Cow position:
Alignm length: 416
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 121

Conread position: 11-407
Cow position:
Alignm length: 424
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 188

Conread position: 11-408
Cow position:
Alignm length: 423
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 189

Conread position: 11-409
Cow position:
Alignm length: 423
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 190

Conread position: 11-409
Cow position:
Alignm length: 424
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 189

Conread position: 11-409
Cow position:
Alignm length: 420
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 183

Conread position: 11-409
Cow position:
Alignm length: 423
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 68

Conread position: 11-409
Cow position:
Alignm length: 427
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 192

Conread position: 11-409
Cow position:
Alignm length: 425
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 190

Conread position: 11-409
Cow position:
Alignm length: 427
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 196

Conread position: 11-409
Cow position:
Alignm length: 427
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 192

Conread position: 11-409
Cow position:
Alignm length: 425
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 11-409
Cow position:
Alignm length: 414
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 103

Conread position: 11-409
Cow position:
Alignm length: 429
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 119

Conread position: 11-409
Cow position:
Alignm length: 429
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 189

Conread position: 11-409
Cow position:
Alignm length: 426
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 190

Conread position: 14-409
Cow position:
Alignm length: 419
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 50

Conread position: 14-409
Cow position:
Alignm length: 419
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 357

Conread position: 14-409
Cow position:
Alignm length: 421
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 189

Conread position: 15-409
Cow position:
Alignm length: 414
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 123

Conread position: 19-409
Cow position:
Alignm length: 415
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 25

Conread position: 63-200
Cow position:
Alignm length: 148
Alignm identity: 117
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 56, 128

Conread position: 63-212
Cow position:
Alignm length: 160
Alignm identity: 123
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 56, 128

Conread position: 63-264
Cow position:
Alignm length: 217
Alignm identity: 156
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 55, 128

Conread position: 63-305
Cow position:
Alignm length: 260
Alignm identity: 197
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 56, 111

Conread position: 63-306
Cow position:
Alignm length: 259
Alignm identity: 198
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 56, 128

Conread position: 63-370
Cow position:
Alignm length: 323
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 127

Conread position: 63-405
Cow position:
Alignm length: 355
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 128

Conread position: 63-409
Cow position:
Alignm length: 363
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 128

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 362
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 9

Conread position: 63-409
Cow position:
Alignm length: 359
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 33

Conread position: 63-409
Cow position:
Alignm length: 360
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 104

Conread position: 63-409
Cow position:
Alignm length: 362
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 128

Conread position: 63-409
Cow position:
Alignm length: 358
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 125

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 366
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 365
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 362
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 356
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 127

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 64-324
Cow position:
Alignm length: 282
Alignm identity: 195
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 54, 0

Conread position: 64-372
Cow position:
Alignm length: 325
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 130

Conread position: 64-395
Cow position:
Alignm length: 340
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 125

Conread position: 64-411
Cow position:
Alignm length: 361
Alignm identity: 238
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 18, 8

Conread position: 64-414
Cow position:
Alignm length: 368
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 131

Conread position: 78-395
Cow position:
Alignm length: 326
Alignm identity: 214
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 57, 70

Conread position: 92-409
Cow position:
Alignm length: 327
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 35

Conread position: 132-409
Cow position:
Alignm length: 280
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 49

Conread position: 132-409
Cow position:
Alignm length: 281
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 50

Conread position: 136-409
Cow position:
Alignm length: 281
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 49

Conread position: 161-425
Cow position:
Alignm length: 273
Alignm identity: 199
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 51, 21

Conread position: 164-409
Cow position:
Alignm length: 253
Alignm identity: 189
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 31, 18

Conread position: 170-409
Cow position:
Alignm length: 247
Alignm identity: 178
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 44, 12

Conread position: 175-409
Cow position:
Alignm length: 242
Alignm identity: 174
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 39, 7

Conread position: 204-409
Cow position:
Alignm length: 207
Alignm identity: 156
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 181, 28

Conread position: 215-409
Cow position:
Alignm length: 196
Alignm identity: 152
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 170, 67

Conread position: 229-409
Cow position:
Alignm length: 182
Alignm identity: 137
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 154, 119

Conread position: 248-409
Cow position:
Alignm length: 172
Alignm identity: 131
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 91, 26

Conread position: 272-409
Cow position:
Alignm length: 139
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 113, 76

Conread position: 295-409
Cow position:
Alignm length: 116
Alignm identity: 92
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 90, 54

Show alignments to all cow chromosomes.