Cow genome map

Conread name: Ss1.1-rthg26_l18.5

Conread position: 1-368
Cow position:
Alignm length: 391
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 34

Conread position: 3-409
Cow position:
Alignm length: 433
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 170

Conread position: 7-409
Cow position:
Alignm length: 432
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 197

Conread position: 9-289
Cow position:
Alignm length: 302
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 188

Conread position: 11-210
Cow position:
Alignm length: 220
Alignm identity: 163
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 36, 190

Conread position: 11-269
Cow position:
Alignm length: 277
Alignm identity: 199
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 38, 182

Conread position: 11-272
Cow position:
Alignm length: 281
Alignm identity: 209
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 32, 186

Conread position: 11-361
Cow position:
Alignm length: 378
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 192

Conread position: 11-373
Cow position:
Alignm length: 383
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 190

Conread position: 11-406
Cow position:
Alignm length: 424
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 192

Conread position: 11-407
Cow position:
Alignm length: 433
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 192

Conread position: 11-409
Cow position:
Alignm length: 418
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 64

Conread position: 11-409
Cow position:
Alignm length: 427
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 192

Conread position: 11-409
Cow position:
Alignm length: 427
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 192

Conread position: 11-409
Cow position:
Alignm length: 417
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 121

Conread position: 14-406
Cow position:
Alignm length: 418
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 186

Conread position: 14-409
Cow position:
Alignm length: 420
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 185

Conread position: 14-409
Cow position:
Alignm length: 403
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 119

Conread position: 14-409
Cow position:
Alignm length: 424
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 189

Conread position: 14-414
Cow position:
Alignm length: 419
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 51

Conread position: 15-409
Cow position:
Alignm length: 421
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 51

Conread position: 15-412
Cow position:
Alignm length: 414
Alignm identity: 278
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 34, 95

Conread position: 19-409
Cow position:
Alignm length: 409
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 183

Conread position: 20-367
Cow position:
Alignm length: 366
Alignm identity: 252
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 27, 178

Conread position: 21-405
Cow position:
Alignm length: 394
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 114

Conread position: 46-379
Cow position:
Alignm length: 334
Alignm identity: 212
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 12, 0

Conread position: 46-409
Cow position:
Alignm length: 383
Alignm identity: 264
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 11, 34

Conread position: 63-275
Cow position:
Alignm length: 232
Alignm identity: 177
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 56, 128

Conread position: 63-305
Cow position:
Alignm length: 257
Alignm identity: 196
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 63, 129

Conread position: 63-381
Cow position:
Alignm length: 335
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 128

Conread position: 63-388
Cow position:
Alignm length: 327
Alignm identity: 221
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 322, 38

Conread position: 63-393
Cow position:
Alignm length: 352
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 127

Conread position: 63-405
Cow position:
Alignm length: 376
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 129

Conread position: 63-407
Cow position:
Alignm length: 360
Alignm identity: 248
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 56, 128

Conread position: 63-409
Cow position:
Alignm length: 359
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 127

Conread position: 63-409
Cow position:
Alignm length: 361
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 298

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 362
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 124

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 202

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 363
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 358
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-410
Cow position:
Alignm length: 357
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 138

Conread position: 64-356
Cow position:
Alignm length: 309
Alignm identity: 218
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 49, 31

Conread position: 66-406
Cow position:
Alignm length: 355
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 199

Conread position: 74-315
Cow position:
Alignm length: 245
Alignm identity: 170
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 60, 50

Conread position: 76-391
Cow position:
Alignm length: 334
Alignm identity: 228
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 45, 5

Conread position: 76-395
Cow position:
Alignm length: 327
Alignm identity: 215
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 11

Conread position: 102-366
Cow position:
Alignm length: 279
Alignm identity: 203
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 25, 87

Conread position: 136-409
Cow position:
Alignm length: 282
Alignm identity: 192
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 151-412
Cow position:
Alignm length: 264
Alignm identity: 193
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 37, 198

Conread position: 152-405
Cow position:
Alignm length: 261
Alignm identity: 188
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 63, 18

Conread position: 157-388
Cow position:
Alignm length: 233
Alignm identity: 171
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 228, 9

Conread position: 165-409
Cow position:
Alignm length: 253
Alignm identity: 190
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 27, 17

Conread position: 166-409
Cow position:
Alignm length: 250
Alignm identity: 185
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 29, 16

Conread position: 180-409
Cow position:
Alignm length: 233
Alignm identity: 169
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 34, 170

Conread position: 200-406
Cow position:
Alignm length: 208
Alignm identity: 157
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 185, 160

Conread position: 204-395
Cow position:
Alignm length: 193
Alignm identity: 143
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 181, 130

Conread position: 245-409
Cow position:
Alignm length: 166
Alignm identity: 126
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 140, 103

Show alignments to all cow chromosomes.