Cow genome map

Conread name: Ss1.1-rthg26_l18.5

Conread position: 6-409
Cow position:
Alignm length: 424
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 84

Conread position: 6-409
Cow position:
Alignm length: 429
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 194

Conread position: 7-392
Cow position:
Alignm length: 404
Alignm identity: 259
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 5, 56

Conread position: 10-409
Cow position:
Alignm length: 408
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 64

Conread position: 11-264
Cow position:
Alignm length: 275
Alignm identity: 203
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 36, 174

Conread position: 11-264
Cow position:
Alignm length: 279
Alignm identity: 201
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 46, 188

Conread position: 11-271
Cow position:
Alignm length: 275
Alignm identity: 191
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 50, 213

Conread position: 11-290
Cow position:
Alignm length: 309
Alignm identity: 182
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 32, 193

Conread position: 11-308
Cow position:
Alignm length: 322
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 193

Conread position: 11-341
Cow position:
Alignm length: 335
Alignm identity: 226
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 46, 106

Conread position: 11-346
Cow position:
Alignm length: 358
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 185

Conread position: 11-347
Cow position:
Alignm length: 359
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 79

Conread position: 11-390
Cow position:
Alignm length: 392
Alignm identity: 261
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 44, 125

Conread position: 11-393
Cow position:
Alignm length: 406
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 189

Conread position: 11-395
Cow position:
Alignm length: 413
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 187

Conread position: 11-395
Cow position:
Alignm length: 424
Alignm identity: 290
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 102, 49

Conread position: 11-395
Cow position:
Alignm length: 404
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 183

Conread position: 11-405
Cow position:
Alignm length: 419
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 194

Conread position: 11-405
Cow position:
Alignm length: 425
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 32

Conread position: 11-409
Cow position:
Alignm length: 411
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 179

Conread position: 11-409
Cow position:
Alignm length: 412
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 184

Conread position: 11-409
Cow position:
Alignm length: 415
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 186

Conread position: 11-409
Cow position:
Alignm length: 424
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 33

Conread position: 11-409
Cow position:
Alignm length: 419
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 53

Conread position: 11-409
Cow position:
Alignm length: 410
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 52

Conread position: 11-409
Cow position:
Alignm length: 415
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 182

Conread position: 11-409
Cow position:
Alignm length: 430
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 193

Conread position: 11-409
Cow position:
Alignm length: 425
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 81

Conread position: 11-409
Cow position:
Alignm length: 425
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 61

Conread position: 11-409
Cow position:
Alignm length: 419
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 21

Conread position: 11-409
Cow position:
Alignm length: 421
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 27

Conread position: 11-409
Cow position:
Alignm length: 422
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 187

Conread position: 11-409
Cow position:
Alignm length: 423
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 32

Conread position: 11-409
Cow position:
Alignm length: 427
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 166

Conread position: 11-409
Cow position:
Alignm length: 424
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 189

Conread position: 11-409
Cow position:
Alignm length: 423
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 194

Conread position: 11-409
Cow position:
Alignm length: 418
Alignm identity: 290
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 53, 239

Conread position: 11-409
Cow position:
Alignm length: 424
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 191

Conread position: 11-412
Cow position:
Alignm length: 427
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 188

Conread position: 11-421
Cow position:
Alignm length: 434
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 188

Conread position: 11-422
Cow position:
Alignm length: 440
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 191

Conread position: 12-409
Cow position:
Alignm length: 422
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 191

Conread position: 14-270
Cow position:
Alignm length: 275
Alignm identity: 196
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 29, 189

Conread position: 14-283
Cow position:
Alignm length: 295
Alignm identity: 208
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 43, 174

Conread position: 14-409
Cow position:
Alignm length: 418
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 189

Conread position: 15-409
Cow position:
Alignm length: 420
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 158

Conread position: 16-409
Cow position:
Alignm length: 417
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 187

Conread position: 17-405
Cow position:
Alignm length: 402
Alignm identity: 279
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 40, 117

Conread position: 19-395
Cow position:
Alignm length: 399
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 181

Conread position: 19-407
Cow position:
Alignm length: 414
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 184

Conread position: 20-372
Cow position:
Alignm length: 378
Alignm identity: 265
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 29, 153

Conread position: 20-409
Cow position:
Alignm length: 418
Alignm identity: 285
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 24, 245

Conread position: 20-411
Cow position:
Alignm length: 401
Alignm identity: 262
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 115, 93

Conread position: 23-397
Cow position:
Alignm length: 398
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 182

Conread position: 23-411
Cow position:
Alignm length: 406
Alignm identity: 269
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 21, 109

Conread position: 46-392
Cow position:
Alignm length: 354
Alignm identity: 231
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 92, 33

Conread position: 46-411
Cow position:
Alignm length: 373
Alignm identity: 241
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 92, 33

Conread position: 48-364
Cow position:
Alignm length: 333
Alignm identity: 218
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 87, 76

Conread position: 48-390
Cow position:
Alignm length: 363
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 54

Conread position: 48-416
Cow position:
Alignm length: 384
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 14

Conread position: 53-409
Cow position:
Alignm length: 374
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 99

Conread position: 56-409
Cow position:
Alignm length: 379
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 17

Conread position: 60-345
Cow position:
Alignm length: 297
Alignm identity: 195
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 19, 13

Conread position: 61-309
Cow position:
Alignm length: 256
Alignm identity: 185
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 64, 43

Conread position: 63-376
Cow position:
Alignm length: 321
Alignm identity: 230
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 75, 52

Conread position: 63-388
Cow position:
Alignm length: 347
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 132

Conread position: 63-393
Cow position:
Alignm length: 342
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 128

Conread position: 63-406
Cow position:
Alignm length: 372
Alignm identity: 254
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 47, 130

Conread position: 63-409
Cow position:
Alignm length: 365
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 129

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 129

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 257
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 128

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 129

Conread position: 63-409
Cow position:
Alignm length: 365
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 22

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 365
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 129

Conread position: 63-409
Cow position:
Alignm length: 363
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 198

Conread position: 63-409
Cow position:
Alignm length: 362
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 128

Conread position: 63-409
Cow position:
Alignm length: 368
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 128

Conread position: 63-409
Cow position:
Alignm length: 360
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 39

Conread position: 63-409
Cow position:
Alignm length: 358
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 357
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 32

Conread position: 63-409
Cow position:
Alignm length: 362
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 128

Conread position: 63-409
Cow position:
Alignm length: 366
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 355
Alignm identity: 239
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 247, 63

Conread position: 63-409
Cow position:
Alignm length: 362
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 9

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 129

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 356
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 125

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 365
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 363
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 129

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 8

Conread position: 63-412
Cow position:
Alignm length: 367
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 130

Conread position: 63-418
Cow position:
Alignm length: 365
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 66

Conread position: 63-420
Cow position:
Alignm length: 376
Alignm identity: 263
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 55, 7

Conread position: 64-269
Cow position:
Alignm length: 222
Alignm identity: 171
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 55, 128

Conread position: 64-406
Cow position:
Alignm length: 360
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 128

Conread position: 64-406
Cow position:
Alignm length: 358
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 128

Conread position: 64-409
Cow position:
Alignm length: 360
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 188

Conread position: 64-409
Cow position:
Alignm length: 363
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 128

Conread position: 64-409
Cow position:
Alignm length: 358
Alignm identity: 253
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 15, 135

Conread position: 64-409
Cow position:
Alignm length: 363
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 128

Conread position: 64-409
Cow position:
Alignm length: 349
Alignm identity: 237
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 54, 123

Conread position: 65-379
Cow position:
Alignm length: 331
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 130

Conread position: 65-409
Cow position:
Alignm length: 357
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 41

Conread position: 66-294
Cow position:
Alignm length: 245
Alignm identity: 182
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 59, 22

Conread position: 66-379
Cow position:
Alignm length: 326
Alignm identity: 217
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 84, 56

Conread position: 66-411
Cow position:
Alignm length: 365
Alignm identity: 236
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 44, 131

Conread position: 69-353
Cow position:
Alignm length: 293
Alignm identity: 192
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 37, 101

Conread position: 80-409
Cow position:
Alignm length: 350
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 119

Conread position: 83-330
Cow position:
Alignm length: 261
Alignm identity: 178
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 42, 111

Conread position: 83-409
Cow position:
Alignm length: 355
Alignm identity: 250
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 42, 109

Conread position: 87-411
Cow position:
Alignm length: 339
Alignm identity: 229
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 34, 196

Conread position: 129-404
Cow position:
Alignm length: 286
Alignm identity: 192
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 85, 37

Conread position: 129-409
Cow position:
Alignm length: 282
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 53

Conread position: 136-306
Cow position:
Alignm length: 176
Alignm identity: 134
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 47, 0

Conread position: 136-394
Cow position:
Alignm length: 262
Alignm identity: 201
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 46, 33

Conread position: 136-409
Cow position:
Alignm length: 275
Alignm identity: 187
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 246, 60

Conread position: 136-409
Cow position:
Alignm length: 277
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 46

Conread position: 137-395
Cow position:
Alignm length: 268
Alignm identity: 180
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 70, 48

Conread position: 138-403
Cow position:
Alignm length: 267
Alignm identity: 173
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 247, 47

Conread position: 140-411
Cow position:
Alignm length: 279
Alignm identity: 191
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 74, 45

Conread position: 148-409
Cow position:
Alignm length: 263
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 34

Conread position: 149-409
Cow position:
Alignm length: 271
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 33

Conread position: 171-409
Cow position:
Alignm length: 246
Alignm identity: 181
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 30, 11

Conread position: 175-411
Cow position:
Alignm length: 239
Alignm identity: 171
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 210, 33

Conread position: 187-409
Cow position:
Alignm length: 226
Alignm identity: 175
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 95, 135

Conread position: 198-411
Cow position:
Alignm length: 214
Alignm identity: 141
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 141, 0

Conread position: 200-409
Cow position:
Alignm length: 212
Alignm identity: 158
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 185, 24

Conread position: 204-409
Cow position:
Alignm length: 212
Alignm identity: 163
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 123, 14

Conread position: 205-390
Cow position:
Alignm length: 187
Alignm identity: 139
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 180, 131

Conread position: 206-368
Cow position:
Alignm length: 166
Alignm identity: 125
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 31, 9

Conread position: 217-375
Cow position:
Alignm length: 159
Alignm identity: 115
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 228-411
Cow position:
Alignm length: 185
Alignm identity: 132
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 157, 81

Conread position: 256-409
Cow position:
Alignm length: 159
Alignm identity: 121
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 94, 0

Conread position: 270-409
Cow position:
Alignm length: 141
Alignm identity: 108
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 115, 78

Conread position: 276-405
Cow position:
Alignm length: 131
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 109, 73

Show alignments to all cow chromosomes.