Cow genome map
Conread name: | Ss1.1-rthg26_l18.5 |
Conread position: | 7-325 |
Cow position: | chr20:21393367-21393703 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 151 |
Conread position: | 11-280 |
Cow position: | chr20:10102747-10102465 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 208 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 36, 190 |
Conread position: | 11-281 |
Cow position: | chr20:4799846-4799556 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 216 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 38, 186 |
Conread position: | 11-368 |
Cow position: | chr20:18315780-18315414 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 264 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 36, 90 |
Conread position: | 11-371 |
Cow position: | chr20:30684138-30684519 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 188 |
Conread position: | 11-395 |
Cow position: | chr20:28160580-28160979 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 191 |
Conread position: | 11-409 |
Cow position: | chr20:3270517-3270927 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 32 |
Conread position: | 11-409 |
Cow position: | chr20:5534741-5535160 (view UCSC Genome Browser custom track) |
Alignm length: | 424 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 183 |
Conread position: | 11-409 |
Cow position: | chr20:8313634-8313217 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 188 |
Conread position: | 11-409 |
Cow position: | chr20:12438962-12438538 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 49 |
Conread position: | 11-409 |
Cow position: | chr20:13762705-13763127 (view UCSC Genome Browser custom track) |
Alignm length: | 424 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 188 |
Conread position: | 11-409 |
Cow position: | chr20:15064568-15064988 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 192 |
Conread position: | 11-409 |
Cow position: | chr20:15098071-15097654 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 184 |
Conread position: | 11-409 |
Cow position: | chr20:23798681-23799109 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 192 |
Conread position: | 11-409 |
Cow position: | chr20:24614349-24614758 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 179 |
Conread position: | 11-409 |
Cow position: | chr20:25851191-25850768 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 192 |
Conread position: | 11-411 |
Cow position: | chr20:23469861-23469441 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 193 |
Conread position: | 20-408 |
Cow position: | chr20:9954162-9953764 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 17 |
Conread position: | 63-212 |
Cow position: | chr20:19192266-19192108 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 123 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 56, 128 |
Conread position: | 63-290 |
Cow position: | chr20:29572325-29572089 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 161 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 61, 131 |
Conread position: | 63-379 |
Cow position: | chr20:11679248-11678918 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 129 |
Conread position: | 63-395 |
Cow position: | chr20:22206411-22206745 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 234 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 62, 24 |
Conread position: | 63-403 |
Cow position: | chr20:13665336-13664993 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 239 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 58, 26 |
Conread position: | 63-405 |
Cow position: | chr20:8835767-8835423 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 239 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 46, 38 |
Conread position: | 63-409 |
Cow position: | chr20:822629-822990 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 129 |
Conread position: | 63-409 |
Cow position: | chr20:3252271-3251912 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 127 |
Conread position: | 63-409 |
Cow position: | chr20:5484054-5484412 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 130 |
Conread position: | 63-409 |
Cow position: | chr20:5560853-5560492 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 129 |
Conread position: | 63-409 |
Cow position: | chr20:7116607-7116246 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 300 |
Conread position: | 63-409 |
Cow position: | chr20:15291880-15292233 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 125 |
Conread position: | 63-409 |
Cow position: | chr20:19437820-19438170 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 120 |
Conread position: | 63-409 |
Cow position: | chr20:21914188-21914551 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 129 |
Conread position: | 63-409 |
Cow position: | chr20:27869059-27869420 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 129 |
Conread position: | 63-409 |
Cow position: | chr20:29948380-29948722 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 149, 56 |
Conread position: | 63-409 |
Cow position: | chr20:35119436-35119793 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 255 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 55, 125 |
Conread position: | 63-414 |
Cow position: | chr20:28565734-28565369 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 129 |
Conread position: | 66-248 |
Cow position: | chr20:28593613-28593799 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 136 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 57, 125 |
Conread position: | 66-409 |
Cow position: | chr20:8004361-8004003 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 127 |
Conread position: | 78-409 |
Cow position: | chr20:15947516-15947157 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 117 |
Conread position: | 93-409 |
Cow position: | chr20:25960995-25961326 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 99 |
Conread position: | 136-409 |
Cow position: | chr20:13680111-13679835 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 46 |
Conread position: | 136-412 |
Cow position: | chr20:3033007-3033287 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 79, 21 |
Conread position: | 156-409 |
Cow position: | chr20:3684520-3684265 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 200 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 26 |
Conread position: | 166-380 |
Cow position: | chr20:10841266-10841053 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 148 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 37, 27 |
Conread position: | 197-406 |
Cow position: | chr20:13434940-13434731 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 147 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 13, 20 |
Conread position: | 212-411 |
Cow position: | chr20:8993618-8993420 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 141 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 22, 15 |
Show alignments to all cow chromosomes.