Cow genome map

Conread name: Ss1.1-rthg26_l18.5

Conread position: 6-371
Cow position:
Alignm length: 384
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 190

Conread position: 7-411
Cow position:
Alignm length: 420
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 85

Conread position: 8-395
Cow position:
Alignm length: 416
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 195

Conread position: 9-409
Cow position:
Alignm length: 427
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 191

Conread position: 11-308
Cow position:
Alignm length: 326
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 12

Conread position: 11-332
Cow position:
Alignm length: 349
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 192

Conread position: 11-340
Cow position:
Alignm length: 343
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 184

Conread position: 11-393
Cow position:
Alignm length: 408
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 165

Conread position: 11-405
Cow position:
Alignm length: 420
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 188

Conread position: 11-409
Cow position:
Alignm length: 419
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 240

Conread position: 11-409
Cow position:
Alignm length: 419
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 157

Conread position: 11-409
Cow position:
Alignm length: 416
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 51

Conread position: 11-409
Cow position:
Alignm length: 426
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 48

Conread position: 11-409
Cow position:
Alignm length: 423
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 178

Conread position: 11-409
Cow position:
Alignm length: 423
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 69

Conread position: 11-410
Cow position:
Alignm length: 421
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 182

Conread position: 11-411
Cow position:
Alignm length: 410
Alignm identity: 278
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 44, 130

Conread position: 14-303
Cow position:
Alignm length: 310
Alignm identity: 223
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 43, 182

Conread position: 14-409
Cow position:
Alignm length: 422
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 150

Conread position: 14-409
Cow position:
Alignm length: 423
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 14-409
Cow position:
Alignm length: 414
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 29

Conread position: 14-410
Cow position:
Alignm length: 424
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 188

Conread position: 20-409
Cow position:
Alignm length: 410
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 45

Conread position: 22-181
Cow position:
Alignm length: 170
Alignm identity: 126
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 32-395
Cow position:
Alignm length: 391
Alignm identity: 250
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 25, 185

Conread position: 49-409
Cow position:
Alignm length: 377
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 23

Conread position: 58-409
Cow position:
Alignm length: 372
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 135

Conread position: 63-200
Cow position:
Alignm length: 148
Alignm identity: 116
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 56, 128

Conread position: 63-267
Cow position:
Alignm length: 221
Alignm identity: 165
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 56, 0

Conread position: 63-321
Cow position:
Alignm length: 274
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 127

Conread position: 63-375
Cow position:
Alignm length: 330
Alignm identity: 230
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 46, 67

Conread position: 63-381
Cow position:
Alignm length: 335
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 129

Conread position: 63-393
Cow position:
Alignm length: 340
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 108

Conread position: 63-395
Cow position:
Alignm length: 348
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 126

Conread position: 63-395
Cow position:
Alignm length: 348
Alignm identity: 237
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 28, 132

Conread position: 63-409
Cow position:
Alignm length: 367
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 304

Conread position: 63-409
Cow position:
Alignm length: 380
Alignm identity: 270
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 62, 128

Conread position: 63-409
Cow position:
Alignm length: 366
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 42

Conread position: 63-409
Cow position:
Alignm length: 362
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 127

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 129

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 127

Conread position: 63-409
Cow position:
Alignm length: 365
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 120

Conread position: 63-409
Cow position:
Alignm length: 363
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 291

Conread position: 63-409
Cow position:
Alignm length: 362
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 290

Conread position: 63-409
Cow position:
Alignm length: 362
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 127

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 128

Conread position: 63-409
Cow position:
Alignm length: 365
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 130

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 129

Conread position: 63-411
Cow position:
Alignm length: 358
Alignm identity: 229
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 47, 105

Conread position: 63-412
Cow position:
Alignm length: 368
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-414
Cow position:
Alignm length: 369
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 64-363
Cow position:
Alignm length: 316
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 129

Conread position: 64-409
Cow position:
Alignm length: 359
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 130

Conread position: 65-409
Cow position:
Alignm length: 360
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 126

Conread position: 73-409
Cow position:
Alignm length: 348
Alignm identity: 234
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 38, 286

Conread position: 76-409
Cow position:
Alignm length: 351
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 116

Conread position: 76-540
Cow position:
Alignm length: 482
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 116

Conread position: 129-405
Cow position:
Alignm length: 278
Alignm identity: 186
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 256, 59

Conread position: 132-409
Cow position:
Alignm length: 285
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 50

Conread position: 137-397
Cow position:
Alignm length: 265
Alignm identity: 178
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 36, 50

Conread position: 141-393
Cow position:
Alignm length: 256
Alignm identity: 170
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 51, 0

Conread position: 146-409
Cow position:
Alignm length: 271
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 23

Conread position: 166-412
Cow position:
Alignm length: 250
Alignm identity: 166
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 70, 19

Conread position: 168-412
Cow position:
Alignm length: 248
Alignm identity: 165
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 190, 17

Conread position: 172-411
Cow position:
Alignm length: 242
Alignm identity: 164
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 91, 21

Conread position: 175-409
Cow position:
Alignm length: 236
Alignm identity: 168
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 210, 7

Conread position: 199-409
Cow position:
Alignm length: 212
Alignm identity: 154
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 182, 149

Show alignments to all cow chromosomes.