Cow genome map

Conread name: Ss1.1-rthg26_l18.5

Conread position: 7-409
Cow position:
Alignm length: 420
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 17

Conread position: 8-395
Cow position:
Alignm length: 419
Alignm identity: 291
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 41, 326

Conread position: 10-409
Cow position:
Alignm length: 421
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 190

Conread position: 10-409
Cow position:
Alignm length: 428
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 193

Conread position: 11-365
Cow position:
Alignm length: 375
Alignm identity: 266
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 35, 176

Conread position: 11-380
Cow position:
Alignm length: 397
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 192

Conread position: 11-406
Cow position:
Alignm length: 423
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 191

Conread position: 11-407
Cow position:
Alignm length: 408
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 54

Conread position: 11-409
Cow position:
Alignm length: 428
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 193

Conread position: 11-409
Cow position:
Alignm length: 418
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 187

Conread position: 11-409
Cow position:
Alignm length: 427
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 192

Conread position: 11-409
Cow position:
Alignm length: 423
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 188

Conread position: 11-409
Cow position:
Alignm length: 427
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 192

Conread position: 11-409
Cow position:
Alignm length: 421
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 185

Conread position: 11-409
Cow position:
Alignm length: 427
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 192

Conread position: 11-409
Cow position:
Alignm length: 404
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 32

Conread position: 11-409
Cow position:
Alignm length: 421
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 190

Conread position: 11-409
Cow position:
Alignm length: 427
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 192

Conread position: 11-409
Cow position:
Alignm length: 427
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 192

Conread position: 11-409
Cow position:
Alignm length: 420
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 23

Conread position: 11-411
Cow position:
Alignm length: 421
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 116

Conread position: 14-393
Cow position:
Alignm length: 409
Alignm identity: 283
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 45, 184

Conread position: 14-409
Cow position:
Alignm length: 418
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 14-409
Cow position:
Alignm length: 410
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 120

Conread position: 15-409
Cow position:
Alignm length: 417
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 182

Conread position: 16-409
Cow position:
Alignm length: 422
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 187

Conread position: 19-409
Cow position:
Alignm length: 407
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 45

Conread position: 19-409
Cow position:
Alignm length: 408
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 179

Conread position: 19-409
Cow position:
Alignm length: 412
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 128

Conread position: 22-380
Cow position:
Alignm length: 376
Alignm identity: 254
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 35, 176

Conread position: 22-409
Cow position:
Alignm length: 405
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 36

Conread position: 33-342
Cow position:
Alignm length: 330
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 50

Conread position: 46-279
Cow position:
Alignm length: 249
Alignm identity: 179
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 79, 152

Conread position: 48-392
Cow position:
Alignm length: 358
Alignm identity: 246
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 5, 13

Conread position: 49-409
Cow position:
Alignm length: 370
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 15

Conread position: 62-341
Cow position:
Alignm length: 297
Alignm identity: 219
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 25, 130

Conread position: 63-216
Cow position:
Alignm length: 160
Alignm identity: 121
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 47, 42

Conread position: 63-281
Cow position:
Alignm length: 235
Alignm identity: 181
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 56, 129

Conread position: 63-335
Cow position:
Alignm length: 289
Alignm identity: 209
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 56, 116

Conread position: 63-394
Cow position:
Alignm length: 346
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 127

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 128

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 359
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 141

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 111

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 129

Conread position: 63-409
Cow position:
Alignm length: 362
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 197

Conread position: 63-409
Cow position:
Alignm length: 365
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 129

Conread position: 63-409
Cow position:
Alignm length: 360
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 129

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 16

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-411
Cow position:
Alignm length: 361
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 124

Conread position: 63-411
Cow position:
Alignm length: 366
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 129

Conread position: 63-414
Cow position:
Alignm length: 365
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 42

Conread position: 64-409
Cow position:
Alignm length: 354
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 124

Conread position: 64-409
Cow position:
Alignm length: 364
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 128

Conread position: 64-409
Cow position:
Alignm length: 358
Alignm identity: 248
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 55, 82

Conread position: 65-354
Cow position:
Alignm length: 306
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 127

Conread position: 65-412
Cow position:
Alignm length: 361
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 99

Conread position: 66-388
Cow position:
Alignm length: 336
Alignm identity: 217
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 44, 129

Conread position: 66-405
Cow position:
Alignm length: 353
Alignm identity: 227
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 52, 133

Conread position: 82-409
Cow position:
Alignm length: 339
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 104

Conread position: 83-409
Cow position:
Alignm length: 344
Alignm identity: 236
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 38, 73

Conread position: 85-409
Cow position:
Alignm length: 342
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 107

Conread position: 91-409
Cow position:
Alignm length: 334
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 98

Conread position: 107-412
Cow position:
Alignm length: 318
Alignm identity: 222
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 11, 60

Conread position: 115-409
Cow position:
Alignm length: 305
Alignm identity: 224
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 49, 69

Conread position: 129-409
Cow position:
Alignm length: 282
Alignm identity: 199
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 256, 53

Conread position: 132-392
Cow position:
Alignm length: 267
Alignm identity: 187
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 81, 50

Conread position: 134-409
Cow position:
Alignm length: 289
Alignm identity: 209
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 81, 48

Conread position: 136-409
Cow position:
Alignm length: 278
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 107

Conread position: 136-409
Cow position:
Alignm length: 281
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 46

Conread position: 136-411
Cow position:
Alignm length: 281
Alignm identity: 197
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 75, 61

Conread position: 140-319
Cow position:
Alignm length: 185
Alignm identity: 143
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 39, 87

Conread position: 148-409
Cow position:
Alignm length: 269
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 34

Conread position: 176-409
Cow position:
Alignm length: 241
Alignm identity: 178
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 35, 6

Conread position: 198-379
Cow position:
Alignm length: 183
Alignm identity: 130
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 47, 30

Conread position: 204-409
Cow position:
Alignm length: 207
Alignm identity: 147
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 181, 149

Conread position: 205-365
Cow position:
Alignm length: 161
Alignm identity: 127
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 144, 0

Conread position: 230-406
Cow position:
Alignm length: 178
Alignm identity: 125
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 152, 19

Conread position: 260-409
Cow position:
Alignm length: 151
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 125, 10

Conread position: 277-409
Cow position:
Alignm length: 134
Alignm identity: 105
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 108, 72

Conread position: 296-409
Cow position:
Alignm length: 115
Alignm identity: 94
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 89, 57

Show alignments to all cow chromosomes.