Cow genome map
Conread name: | Ss1.1-rthg26_l18.5 |
Conread position: | 6-323 |
Cow position: | chr24:17187372-17187709 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 132 |
Conread position: | 6-411 |
Cow position: | chr24:14384785-14384358 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 299 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 45, 37 |
Conread position: | 7-409 |
Cow position: | chr24:1447396-1447809 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 181 |
Conread position: | 11-259 |
Cow position: | chr24:13531702-13531431 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 199 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 29, 81 |
Conread position: | 11-375 |
Cow position: | chr24:14390890-14390511 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 32 |
Conread position: | 11-409 |
Cow position: | chr24:12114202-12113792 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 83 |
Conread position: | 11-409 |
Cow position: | chr24:12797929-12797513 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 167 |
Conread position: | 11-409 |
Cow position: | chr24:15392472-15392084 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 186 |
Conread position: | 11-409 |
Cow position: | chr24:16649469-16649062 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 193 |
Conread position: | 11-409 |
Cow position: | chr24:19833215-19833640 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 189 |
Conread position: | 11-409 |
Cow position: | chr24:33933199-33933621 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 38 |
Conread position: | 19-409 |
Cow position: | chr24:4415684-4415274 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 182 |
Conread position: | 33-410 |
Cow position: | chr24:14885380-14884996 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 267 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 24, 98 |
Conread position: | 45-373 |
Cow position: | chr24:39678305-39678627 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 242 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 8, 135 |
Conread position: | 48-395 |
Cow position: | chr24:9092391-9092041 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 14 |
Conread position: | 48-409 |
Cow position: | chr24:6145242-6145623 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 14 |
Conread position: | 62-368 |
Cow position: | chr24:40654282-40654599 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 218 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 23, 132 |
Conread position: | 63-191 |
Cow position: | chr24:13021562-13021699 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 108 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 56, 128 |
Conread position: | 63-253 |
Cow position: | chr24:12288832-12288630 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 148 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 55, 127 |
Conread position: | 63-307 |
Cow position: | chr24:2636014-2636270 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 200 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 56, 129 |
Conread position: | 63-309 |
Cow position: | chr24:6645309-6645568 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 199 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 127 |
Conread position: | 63-318 |
Cow position: | chr24:7060996-7061264 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 90 |
Conread position: | 63-384 |
Cow position: | chr24:13188079-13188416 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 129 |
Conread position: | 63-393 |
Cow position: | chr24:33739450-33739098 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 253 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 56, 128 |
Conread position: | 63-400 |
Cow position: | chr24:12161773-12162121 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 128 |
Conread position: | 63-409 |
Cow position: | chr24:148720-148364 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 109 |
Conread position: | 63-409 |
Cow position: | chr24:6025201-6024841 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 129 |
Conread position: | 63-409 |
Cow position: | chr24:6083911-6084272 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 129 |
Conread position: | 63-409 |
Cow position: | chr24:6434135-6434495 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 129 |
Conread position: | 63-409 |
Cow position: | chr24:8030045-8030406 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 129 |
Conread position: | 63-409 |
Cow position: | chr24:9188837-9188476 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 129 |
Conread position: | 63-409 |
Cow position: | chr24:12086092-12086453 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 181 |
Conread position: | 63-409 |
Cow position: | chr24:12236948-12237309 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 252 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 56, 135 |
Conread position: | 63-409 |
Cow position: | chr24:12485423-12485062 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 129 |
Conread position: | 63-409 |
Cow position: | chr24:14584988-14585331 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 126 |
Conread position: | 63-409 |
Cow position: | chr24:16084766-16084404 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 129 |
Conread position: | 63-409 |
Cow position: | chr24:22793068-22793427 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 116 |
Conread position: | 63-409 |
Cow position: | chr24:22952030-22952391 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 129 |
Conread position: | 63-409 |
Cow position: | chr24:40548771-40549129 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 129 |
Conread position: | 63-409 |
Cow position: | chr24:44017440-44017801 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 129 |
Conread position: | 63-412 |
Cow position: | chr24:6335593-6335941 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 128 |
Conread position: | 64-395 |
Cow position: | chr24:35838730-35838375 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 128 |
Conread position: | 70-408 |
Cow position: | chr24:36560182-36559833 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 125 |
Conread position: | 78-370 |
Cow position: | chr24:38635670-38635969 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 215 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 57, 40 |
Conread position: | 78-395 |
Cow position: | chr24:12131575-12131245 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 110 |
Conread position: | 82-392 |
Cow position: | chr24:35841699-35841385 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 33 |
Conread position: | 84-409 |
Cow position: | chr24:37216919-37217255 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 109 |
Conread position: | 84-411 |
Cow position: | chr24:6537466-6537798 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 230 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 41, 114 |
Conread position: | 90-372 |
Cow position: | chr24:12224548-12224245 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 218 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 29, 105 |
Conread position: | 118-409 |
Cow position: | chr24:6660655-6660344 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 71 |
Conread position: | 138-375 |
Cow position: | chr24:6048248-6048478 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 163 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 191, 46 |
Conread position: | 141-381 |
Cow position: | chr24:17696985-17696747 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 180 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 73, 22 |
Conread position: | 165-408 |
Cow position: | chr24:13524126-13524358 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 178 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 220, 17 |
Conread position: | 182-411 |
Cow position: | chr24:12335748-12335517 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 169 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 16, 168 |
Conread position: | 205-409 |
Cow position: | chr24:29187334-29187538 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 155 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 180, 143 |
Show alignments to all cow chromosomes.