Cow genome map
| Conread name: | Ss1.1-rthg26_l18.5 |
| Conread position: | 9-409 |
| Cow position: | chr26:19351706-19351282 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 192 |
| Conread position: | 10-333 |
| Cow position: | chr26:11301605-11301943 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 229 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 49, 180 |
| Conread position: | 11-371 |
| Cow position: | chr26:20254879-20255247 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 190 |
| Conread position: | 11-392 |
| Cow position: | chr26:8283232-8282846 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 268 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 51, 102 |
| Conread position: | 11-409 |
| Cow position: | chr26:30589560-30589138 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 24 |
| Conread position: | 19-409 |
| Cow position: | chr26:5674987-5675391 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 117 |
| Conread position: | 20-409 |
| Cow position: | chr26:12574575-12574177 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 178 |
| Conread position: | 21-409 |
| Cow position: | chr26:3030991-3030597 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 272 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 116, 43 |
| Conread position: | 63-217 |
| Cow position: | chr26:12659818-12659657 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 56, 128 |
| Conread position: | 63-294 |
| Cow position: | chr26:11536960-11536719 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 62, 159 |
| Conread position: | 63-395 |
| Cow position: | chr26:20262732-20263070 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 45, 176 |
| Conread position: | 63-409 |
| Cow position: | chr26:2198499-2198858 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 127 |
| Conread position: | 63-409 |
| Cow position: | chr26:2352486-2352128 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 128 |
| Conread position: | 63-409 |
| Cow position: | chr26:3691678-3692029 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 128 |
| Conread position: | 63-409 |
| Cow position: | chr26:4605310-4604955 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 127 |
| Conread position: | 63-409 |
| Cow position: | chr26:8869749-8870114 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 103 |
| Conread position: | 63-409 |
| Cow position: | chr26:9563486-9563126 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 129 |
| Conread position: | 63-409 |
| Cow position: | chr26:11254185-11253824 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 129 |
| Conread position: | 63-409 |
| Cow position: | chr26:12588693-12588331 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 129 |
| Conread position: | 63-409 |
| Cow position: | chr26:12656166-12656507 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 128 |
| Conread position: | 63-409 |
| Cow position: | chr26:15144885-15144528 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 13 |
| Conread position: | 63-409 |
| Cow position: | chr26:30782637-30782975 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 56 |
| Conread position: | 64-409 |
| Cow position: | chr26:18854961-18855320 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 128 |
| Conread position: | 76-264 |
| Cow position: | chr26:21350261-21350463 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 49, 120 |
| Conread position: | 79-409 |
| Cow position: | chr26:17397042-17396699 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 282 |
| Conread position: | 94-409 |
| Cow position: | chr26:8918763-8919082 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 201 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 117, 88 |
| Conread position: | 172-409 |
| Cow position: | chr26:9845584-9845346 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 180 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 17, 59 |
| Conread position: | 173-409 |
| Cow position: | chr26:18852211-18852451 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 183 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 22, 9 |
| Conread position: | 194-409 |
| Cow position: | chr26:9112755-9112970 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 189, 145 |
| Conread position: | 198-395 |
| Cow position: | chr26:12666123-12666324 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 25, 154 |
| Conread position: | 200-409 |
| Cow position: | chr26:9849900-9849694 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 164 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 185, 13 |
| Conread position: | 200-409 |
| Cow position: | chr26:9853410-9853205 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 185, 13 |
| Conread position: | 204-409 |
| Cow position: | chr26:23603739-23603535 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 163 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 181, 79 |
| Conread position: | 211-363 |
| Cow position: | chr26:4806507-4806357 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 213-409 |
| Cow position: | chr26:4334181-4334377 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 172, 126 |
| Conread position: | 218-395 |
| Cow position: | chr26:6849395-6849219 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 167, 36 |
Show alignments to all cow chromosomes.