Cow genome map
| Conread name: | Ss1.1-rthg26_l18.5 |
| Conread position: | 6-395 |
| Cow position: | chr3:50128206-50127797 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 193 |
| Conread position: | 6-403 |
| Cow position: | chr3:18463907-18463501 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 60 |
| Conread position: | 7-392 |
| Cow position: | chr3:18729463-18729061 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 275 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 5, 190 |
| Conread position: | 7-392 |
| Cow position: | chr3:32618236-32617839 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 249 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 119, 57 |
| Conread position: | 8-409 |
| Cow position: | chr3:472207-472629 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 197 |
| Conread position: | 10-268 |
| Cow position: | chr3:39326364-39326640 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 38, 187 |
| Conread position: | 11-212 |
| Cow position: | chr3:56650590-56650374 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 50, 33 |
| Conread position: | 11-340 |
| Cow position: | chr3:14634425-14634084 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 32 |
| Conread position: | 11-390 |
| Cow position: | chr3:594263-594654 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 181 |
| Conread position: | 11-395 |
| Cow position: | chr3:16072836-16073220 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 264 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 32, 123 |
| Conread position: | 11-400 |
| Cow position: | chr3:3806033-3806427 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 122 |
| Conread position: | 11-405 |
| Cow position: | chr3:23291731-23291314 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 151 |
| Conread position: | 11-406 |
| Cow position: | chr3:50914978-50915400 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 162 |
| Conread position: | 11-409 |
| Cow position: | chr3:2653784-2654204 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 187 |
| Conread position: | 11-409 |
| Cow position: | chr3:2711284-2710865 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 189 |
| Conread position: | 11-409 |
| Cow position: | chr3:3054286-3054693 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 32 |
| Conread position: | 11-409 |
| Cow position: | chr3:5047510-5047087 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 102 |
| Conread position: | 11-409 |
| Cow position: | chr3:5829955-5829532 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 192 |
| Conread position: | 11-409 |
| Cow position: | chr3:9716485-9716911 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 194 |
| Conread position: | 11-409 |
| Cow position: | chr3:10239326-10239746 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 188 |
| Conread position: | 11-409 |
| Cow position: | chr3:18811177-18811600 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 192 |
| Conread position: | 11-409 |
| Cow position: | chr3:31354580-31354168 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 187 |
| Conread position: | 11-409 |
| Cow position: | chr3:36882238-36881825 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 185 |
| Conread position: | 11-409 |
| Cow position: | chr3:38866078-38866492 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 156 |
| Conread position: | 11-409 |
| Cow position: | chr3:40823062-40823484 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 190 |
| Conread position: | 11-409 |
| Cow position: | chr3:43040018-43039609 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 191 |
| Conread position: | 11-409 |
| Cow position: | chr3:56340746-56340330 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 184 |
| Conread position: | 11-409 |
| Cow position: | chr3:64017690-64017267 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 190 |
| Conread position: | 11-409 |
| Cow position: | chr3:66638413-66638837 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 195 |
| Conread position: | 11-409 |
| Cow position: | chr3:69933071-69933491 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 188 |
| Conread position: | 11-409 |
| Cow position: | chr3:72629745-72630167 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 31 |
| Conread position: | 11-409 |
| Cow position: | chr3:75041489-75041071 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 188 |
| Conread position: | 11-409 |
| Cow position: | chr3:78027737-78027313 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 192 |
| Conread position: | 11-412 |
| Cow position: | chr3:21183008-21182584 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 189 |
| Conread position: | 11-418 |
| Cow position: | chr3:31898299-31897872 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 169 |
| Conread position: | 11-436 |
| Cow position: | chr3:48231308-48230887 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 107 |
| Conread position: | 14-332 |
| Cow position: | chr3:24591934-24591621 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 226 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 198, 50 |
| Conread position: | 14-409 |
| Cow position: | chr3:2633605-2634022 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 184 |
| Conread position: | 14-409 |
| Cow position: | chr3:17828970-17828552 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 186 |
| Conread position: | 14-409 |
| Cow position: | chr3:48061150-48060735 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 100 |
| Conread position: | 14-409 |
| Cow position: | chr3:64028406-64027989 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 186 |
| Conread position: | 14-412 |
| Cow position: | chr3:6782067-6782484 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 185 |
| Conread position: | 15-407 |
| Cow position: | chr3:45869525-45869122 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 192 |
| Conread position: | 17-366 |
| Cow position: | chr3:63242042-63241702 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 47 |
| Conread position: | 19-256 |
| Cow position: | chr3:47273284-47273049 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 100, 42 |
| Conread position: | 19-395 |
| Cow position: | chr3:4026957-4027355 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 24 |
| Conread position: | 20-380 |
| Cow position: | chr3:21945719-21945342 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 268 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 37, 162 |
| Conread position: | 20-394 |
| Cow position: | chr3:51940723-51940339 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 271 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 56, 172 |
| Conread position: | 23-303 |
| Cow position: | chr3:32842740-32842443 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 26, 83 |
| Conread position: | 26-409 |
| Cow position: | chr3:18357190-18356790 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 278 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 43, 153 |
| Conread position: | 48-335 |
| Cow position: | chr3:80871628-80871918 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 74, 20 |
| Conread position: | 48-379 |
| Cow position: | chr3:17936341-17935997 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 223 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 70, 22 |
| Conread position: | 48-408 |
| Cow position: | chr3:29594926-29595290 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 16 |
| Conread position: | 48-408 |
| Cow position: | chr3:66990528-66990882 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 14 |
| Conread position: | 48-409 |
| Cow position: | chr3:64358444-64358073 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 141 |
| Conread position: | 49-409 |
| Cow position: | chr3:5954461-5954089 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 17 |
| Conread position: | 49-409 |
| Cow position: | chr3:34031171-34030802 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 17 |
| Conread position: | 49-409 |
| Cow position: | chr3:59861091-59861463 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 17 |
| Conread position: | 58-409 |
| Cow position: | chr3:15178042-15178409 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 257 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 63, 108 |
| Conread position: | 59-411 |
| Cow position: | chr3:19722870-19722524 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 51, 79 |
| Conread position: | 63-286 |
| Cow position: | chr3:72704934-72705172 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 63-307 |
| Cow position: | chr3:4285622-4285881 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 129 |
| Conread position: | 63-378 |
| Cow position: | chr3:15989299-15988970 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 129 |
| Conread position: | 63-405 |
| Cow position: | chr3:46678176-46677821 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 127 |
| Conread position: | 63-406 |
| Cow position: | chr3:41212001-41211643 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 129 |
| Conread position: | 63-406 |
| Cow position: | chr3:54864962-54864605 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 133 |
| Conread position: | 63-407 |
| Cow position: | chr3:46861561-46861208 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 123 |
| Conread position: | 63-408 |
| Cow position: | chr3:70083909-70083556 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 128 |
| Conread position: | 63-409 |
| Cow position: | chr3:207423-207064 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 129 |
| Conread position: | 63-409 |
| Cow position: | chr3:2917199-2917558 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 127 |
| Conread position: | 63-409 |
| Cow position: | chr3:3522751-3523118 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 297 |
| Conread position: | 63-409 |
| Cow position: | chr3:5883277-5883636 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 129 |
| Conread position: | 63-409 |
| Cow position: | chr3:5995959-5995600 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 35 |
| Conread position: | 63-409 |
| Cow position: | chr3:6685198-6685558 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 128 |
| Conread position: | 63-409 |
| Cow position: | chr3:7158994-7158636 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 111 |
| Conread position: | 63-409 |
| Cow position: | chr3:7168532-7168890 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 129 |
| Conread position: | 63-409 |
| Cow position: | chr3:18542671-18542311 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 299 |
| Conread position: | 63-409 |
| Cow position: | chr3:18859159-18859511 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 13 |
| Conread position: | 63-409 |
| Cow position: | chr3:19757223-19756862 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 129 |
| Conread position: | 63-409 |
| Cow position: | chr3:19878399-19878755 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 117 |
| Conread position: | 63-409 |
| Cow position: | chr3:19938650-19938982 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 259 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 56, 111 |
| Conread position: | 63-409 |
| Cow position: | chr3:19943801-19944147 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 125 |
| Conread position: | 63-409 |
| Cow position: | chr3:22335629-22335985 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 129 |
| Conread position: | 63-409 |
| Cow position: | chr3:24314215-24314566 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 129 |
| Conread position: | 63-409 |
| Cow position: | chr3:26949251-26949609 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 140 |
| Conread position: | 63-409 |
| Cow position: | chr3:32146351-32145993 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 13 |
| Conread position: | 63-409 |
| Cow position: | chr3:34093686-34093352 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 149, 62 |
| Conread position: | 63-409 |
| Cow position: | chr3:36117412-36117760 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 259 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 56, 129 |
| Conread position: | 63-409 |
| Cow position: | chr3:42431972-42432328 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 124 |
| Conread position: | 63-409 |
| Cow position: | chr3:42580228-42579870 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 32 |
| Conread position: | 63-409 |
| Cow position: | chr3:45032478-45032838 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 117 |
| Conread position: | 63-409 |
| Cow position: | chr3:47081921-47081561 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 91 |
| Conread position: | 63-409 |
| Cow position: | chr3:47179467-47179106 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 129 |
| Conread position: | 63-409 |
| Cow position: | chr3:49614240-49613880 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 91 |
| Conread position: | 63-409 |
| Cow position: | chr3:55229957-55229604 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 109 |
| Conread position: | 63-409 |
| Cow position: | chr3:56321054-56321412 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 129 |
| Conread position: | 63-409 |
| Cow position: | chr3:57484987-57484632 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 125 |
| Conread position: | 63-409 |
| Cow position: | chr3:58947192-58947555 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 130 |
| Conread position: | 63-409 |
| Cow position: | chr3:64650368-64650722 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 129 |
| Conread position: | 63-409 |
| Cow position: | chr3:66119393-66119752 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 127 |
| Conread position: | 63-409 |
| Cow position: | chr3:77474499-77474858 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 10 |
| Conread position: | 63-411 |
| Cow position: | chr3:42630750-42631112 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 62, 141 |
| Conread position: | 63-411 |
| Cow position: | chr3:60210441-60210079 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 255 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 58, 132 |
| Conread position: | 63-412 |
| Cow position: | chr3:34396316-34395981 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 252 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 74, 64 |
| Conread position: | 63-433 |
| Cow position: | chr3:57856473-57856857 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 129 |
| Conread position: | 64-314 |
| Cow position: | chr3:63005411-63005144 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 59, 128 |
| Conread position: | 64-356 |
| Cow position: | chr3:37968818-37969122 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 126 |
| Conread position: | 64-409 |
| Cow position: | chr3:66891224-66890866 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 128 |
| Conread position: | 64-413 |
| Cow position: | chr3:14754558-14754197 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 100 |
| Conread position: | 64-416 |
| Cow position: | chr3:57499779-57499426 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 6 |
| Conread position: | 65-406 |
| Cow position: | chr3:3980124-3980480 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 131 |
| Conread position: | 66-411 |
| Cow position: | chr3:17775838-17776183 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 241 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 59, 136 |
| Conread position: | 69-411 |
| Cow position: | chr3:21305423-21305083 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 66, 122 |
| Conread position: | 73-409 |
| Cow position: | chr3:53515365-53515710 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 117 |
| Conread position: | 78-428 |
| Cow position: | chr3:57501020-57500672 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 75, 48 |
| Conread position: | 81-403 |
| Cow position: | chr3:49333154-49333480 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 27, 114 |
| Conread position: | 81-409 |
| Cow position: | chr3:36127146-36127488 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 240 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 40, 20 |
| Conread position: | 84-409 |
| Cow position: | chr3:66619936-66620269 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 108 |
| Conread position: | 89-371 |
| Cow position: | chr3:19802422-19802717 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 216 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 36, 106 |
| Conread position: | 92-409 |
| Cow position: | chr3:30314339-30314663 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 92 |
| Conread position: | 132-411 |
| Cow position: | chr3:54783356-54783643 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 71, 62 |
| Conread position: | 133-406 |
| Cow position: | chr3:39326535-39326811 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 66 |
| Conread position: | 136-409 |
| Cow position: | chr3:26822674-26822412 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 46 |
| Conread position: | 136-409 |
| Cow position: | chr3:32623203-32622938 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 79, 46 |
| Conread position: | 137-388 |
| Cow position: | chr3:49276298-49276045 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 19, 76 |
| Conread position: | 138-411 |
| Cow position: | chr3:29327159-29326881 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 76, 47 |
| Conread position: | 146-409 |
| Cow position: | chr3:23214232-23213965 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 36 |
| Conread position: | 159-409 |
| Cow position: | chr3:52864631-52864369 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 199 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 55, 23 |
| Conread position: | 164-334 |
| Cow position: | chr3:6189056-6189237 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 50, 18 |
| Conread position: | 165-409 |
| Cow position: | chr3:14439911-14439664 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 189 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 50, 5 |
| Conread position: | 172-406 |
| Cow position: | chr3:83234269-83234033 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 31, 13 |
| Conread position: | 172-409 |
| Cow position: | chr3:49137685-49137443 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 183 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 42, 10 |
| Conread position: | 176-363 |
| Cow position: | chr3:13518422-13518232 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 38, 6 |
| Conread position: | 180-409 |
| Cow position: | chr3:45974367-45974594 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 174 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 205, 9 |
| Conread position: | 183-409 |
| Cow position: | chr3:45895688-45895461 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 171 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 22, 166 |
| Conread position: | 189-409 |
| Cow position: | chr3:49545331-49545110 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 168 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 5, 160 |
| Conread position: | 195-409 |
| Cow position: | chr3:49677670-49677883 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 190, 116 |
| Conread position: | 198-409 |
| Cow position: | chr3:2908467-2908260 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 36, 11 |
| Conread position: | 204-409 |
| Cow position: | chr3:40157613-40157409 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 167 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 127 |
| Conread position: | 211-409 |
| Cow position: | chr3:68700070-68699875 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 211-409 |
| Cow position: | chr3:68873848-68873657 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 174, 36 |
| Conread position: | 228-410 |
| Cow position: | chr3:77442800-77442977 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 232-409 |
| Cow position: | chr3:77423601-77423772 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 153, 115 |
| Conread position: | 252-412 |
| Cow position: | chr3:36864419-36864259 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 133, 87 |
Show alignments to all cow chromosomes.