Cow genome map

Conread name: Ss1.1-rthg26_l18.5

Conread position: 6-395
Cow position:
Alignm length: 412
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 193

Conread position: 6-403
Cow position:
Alignm length: 417
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 60

Conread position: 7-392
Cow position:
Alignm length: 409
Alignm identity: 275
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 5, 190

Conread position: 7-392
Cow position:
Alignm length: 402
Alignm identity: 249
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 119, 57

Conread position: 8-409
Cow position:
Alignm length: 425
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 197

Conread position: 10-268
Cow position:
Alignm length: 278
Alignm identity: 189
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 38, 187

Conread position: 11-212
Cow position:
Alignm length: 219
Alignm identity: 158
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 50, 33

Conread position: 11-340
Cow position:
Alignm length: 346
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 32

Conread position: 11-390
Cow position:
Alignm length: 393
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 181

Conread position: 11-395
Cow position:
Alignm length: 398
Alignm identity: 264
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 32, 123

Conread position: 11-400
Cow position:
Alignm length: 399
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 122

Conread position: 11-405
Cow position:
Alignm length: 422
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 151

Conread position: 11-406
Cow position:
Alignm length: 426
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 162

Conread position: 11-409
Cow position:
Alignm length: 423
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 187

Conread position: 11-409
Cow position:
Alignm length: 423
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 189

Conread position: 11-409
Cow position:
Alignm length: 417
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 32

Conread position: 11-409
Cow position:
Alignm length: 427
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 102

Conread position: 11-409
Cow position:
Alignm length: 426
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 192

Conread position: 11-409
Cow position:
Alignm length: 429
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 194

Conread position: 11-409
Cow position:
Alignm length: 423
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 188

Conread position: 11-409
Cow position:
Alignm length: 427
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 192

Conread position: 11-409
Cow position:
Alignm length: 416
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 187

Conread position: 11-409
Cow position:
Alignm length: 416
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 185

Conread position: 11-409
Cow position:
Alignm length: 422
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 156

Conread position: 11-409
Cow position:
Alignm length: 425
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 190

Conread position: 11-409
Cow position:
Alignm length: 420
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 191

Conread position: 11-409
Cow position:
Alignm length: 419
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 184

Conread position: 11-409
Cow position:
Alignm length: 426
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 190

Conread position: 11-409
Cow position:
Alignm length: 427
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 195

Conread position: 11-409
Cow position:
Alignm length: 423
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 188

Conread position: 11-409
Cow position:
Alignm length: 425
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 31

Conread position: 11-409
Cow position:
Alignm length: 423
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 188

Conread position: 11-409
Cow position:
Alignm length: 428
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 192

Conread position: 11-412
Cow position:
Alignm length: 428
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 189

Conread position: 11-418
Cow position:
Alignm length: 435
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 169

Conread position: 11-436
Cow position:
Alignm length: 438
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 107

Conread position: 14-332
Cow position:
Alignm length: 323
Alignm identity: 226
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 198, 50

Conread position: 14-409
Cow position:
Alignm length: 422
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 184

Conread position: 14-409
Cow position:
Alignm length: 421
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 186

Conread position: 14-409
Cow position:
Alignm length: 422
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 100

Conread position: 14-409
Cow position:
Alignm length: 421
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 186

Conread position: 14-412
Cow position:
Alignm length: 424
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 185

Conread position: 15-407
Cow position:
Alignm length: 406
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 192

Conread position: 17-366
Cow position:
Alignm length: 355
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 47

Conread position: 19-256
Cow position:
Alignm length: 248
Alignm identity: 179
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 100, 42

Conread position: 19-395
Cow position:
Alignm length: 402
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 24

Conread position: 20-380
Cow position:
Alignm length: 384
Alignm identity: 268
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 37, 162

Conread position: 20-394
Cow position:
Alignm length: 392
Alignm identity: 271
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 56, 172

Conread position: 23-303
Cow position:
Alignm length: 304
Alignm identity: 209
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 26, 83

Conread position: 26-409
Cow position:
Alignm length: 404
Alignm identity: 278
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 43, 153

Conread position: 48-335
Cow position:
Alignm length: 295
Alignm identity: 198
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 74, 20

Conread position: 48-379
Cow position:
Alignm length: 348
Alignm identity: 223
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 70, 22

Conread position: 48-408
Cow position:
Alignm length: 375
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 16

Conread position: 48-408
Cow position:
Alignm length: 371
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 14

Conread position: 48-409
Cow position:
Alignm length: 379
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 141

Conread position: 49-409
Cow position:
Alignm length: 378
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 17

Conread position: 49-409
Cow position:
Alignm length: 377
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 17

Conread position: 49-409
Cow position:
Alignm length: 378
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 17

Conread position: 58-409
Cow position:
Alignm length: 373
Alignm identity: 257
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 63, 108

Conread position: 59-411
Cow position:
Alignm length: 355
Alignm identity: 235
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 51, 79

Conread position: 63-286
Cow position:
Alignm length: 239
Alignm identity: 179
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 62, 0

Conread position: 63-307
Cow position:
Alignm length: 261
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-378
Cow position:
Alignm length: 332
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-405
Cow position:
Alignm length: 359
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 127

Conread position: 63-406
Cow position:
Alignm length: 361
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-406
Cow position:
Alignm length: 360
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 133

Conread position: 63-407
Cow position:
Alignm length: 356
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 123

Conread position: 63-408
Cow position:
Alignm length: 363
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 128

Conread position: 63-409
Cow position:
Alignm length: 362
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 129

Conread position: 63-409
Cow position:
Alignm length: 362
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 127

Conread position: 63-409
Cow position:
Alignm length: 369
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 297

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 35

Conread position: 63-409
Cow position:
Alignm length: 363
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 128

Conread position: 63-409
Cow position:
Alignm length: 363
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 111

Conread position: 63-409
Cow position:
Alignm length: 363
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 129

Conread position: 63-409
Cow position:
Alignm length: 362
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 299

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 13

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 117

Conread position: 63-409
Cow position:
Alignm length: 358
Alignm identity: 259
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 56, 111

Conread position: 63-409
Cow position:
Alignm length: 358
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 125

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 358
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 363
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 140

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 13

Conread position: 63-409
Cow position:
Alignm length: 350
Alignm identity: 232
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 149, 62

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 259
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 359
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 124

Conread position: 63-409
Cow position:
Alignm length: 363
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 32

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 117

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 91

Conread position: 63-409
Cow position:
Alignm length: 365
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 91

Conread position: 63-409
Cow position:
Alignm length: 361
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 109

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 129

Conread position: 63-409
Cow position:
Alignm length: 360
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 125

Conread position: 63-409
Cow position:
Alignm length: 366
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 130

Conread position: 63-409
Cow position:
Alignm length: 358
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 362
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 127

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 10

Conread position: 63-411
Cow position:
Alignm length: 368
Alignm identity: 244
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 62, 141

Conread position: 63-411
Cow position:
Alignm length: 369
Alignm identity: 255
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 58, 132

Conread position: 63-412
Cow position:
Alignm length: 357
Alignm identity: 252
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 74, 64

Conread position: 63-433
Cow position:
Alignm length: 388
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 129

Conread position: 64-314
Cow position:
Alignm length: 269
Alignm identity: 191
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 59, 128

Conread position: 64-356
Cow position:
Alignm length: 307
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 126

Conread position: 64-409
Cow position:
Alignm length: 363
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 128

Conread position: 64-413
Cow position:
Alignm length: 366
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 100

Conread position: 64-416
Cow position:
Alignm length: 367
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 6

Conread position: 65-406
Cow position:
Alignm length: 362
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 131

Conread position: 66-411
Cow position:
Alignm length: 356
Alignm identity: 241
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 59, 136

Conread position: 69-411
Cow position:
Alignm length: 349
Alignm identity: 228
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 66, 122

Conread position: 73-409
Cow position:
Alignm length: 349
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 117

Conread position: 78-428
Cow position:
Alignm length: 357
Alignm identity: 231
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 75, 48

Conread position: 81-403
Cow position:
Alignm length: 336
Alignm identity: 222
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 27, 114

Conread position: 81-409
Cow position:
Alignm length: 349
Alignm identity: 240
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 40, 20

Conread position: 84-409
Cow position:
Alignm length: 340
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 108

Conread position: 89-371
Cow position:
Alignm length: 299
Alignm identity: 216
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 36, 106

Conread position: 92-409
Cow position:
Alignm length: 328
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 92

Conread position: 132-411
Cow position:
Alignm length: 292
Alignm identity: 200
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 71, 62

Conread position: 133-406
Cow position:
Alignm length: 279
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 66

Conread position: 136-409
Cow position:
Alignm length: 275
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 46

Conread position: 136-409
Cow position:
Alignm length: 281
Alignm identity: 204
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 79, 46

Conread position: 137-388
Cow position:
Alignm length: 259
Alignm identity: 178
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 19, 76

Conread position: 138-411
Cow position:
Alignm length: 281
Alignm identity: 186
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 76, 47

Conread position: 146-409
Cow position:
Alignm length: 271
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 36

Conread position: 159-409
Cow position:
Alignm length: 264
Alignm identity: 199
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 55, 23

Conread position: 164-334
Cow position:
Alignm length: 183
Alignm identity: 134
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 50, 18

Conread position: 165-409
Cow position:
Alignm length: 251
Alignm identity: 189
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 50, 5

Conread position: 172-406
Cow position:
Alignm length: 243
Alignm identity: 171
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 31, 13

Conread position: 172-409
Cow position:
Alignm length: 245
Alignm identity: 183
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 42, 10

Conread position: 176-363
Cow position:
Alignm length: 194
Alignm identity: 149
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 6

Conread position: 180-409
Cow position:
Alignm length: 231
Alignm identity: 174
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 205, 9

Conread position: 183-409
Cow position:
Alignm length: 229
Alignm identity: 171
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 22, 166

Conread position: 189-409
Cow position:
Alignm length: 223
Alignm identity: 168
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 5, 160

Conread position: 195-409
Cow position:
Alignm length: 216
Alignm identity: 162
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 190, 116

Conread position: 198-409
Cow position:
Alignm length: 215
Alignm identity: 163
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 36, 11

Conread position: 204-409
Cow position:
Alignm length: 207
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 127

Conread position: 211-409
Cow position:
Alignm length: 199
Alignm identity: 147
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 137, 0

Conread position: 211-409
Cow position:
Alignm length: 200
Alignm identity: 144
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 174, 36

Conread position: 228-410
Cow position:
Alignm length: 183
Alignm identity: 129
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 232-409
Cow position:
Alignm length: 179
Alignm identity: 139
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 153, 115

Conread position: 252-412
Cow position:
Alignm length: 162
Alignm identity: 119
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 133, 87

Show alignments to all cow chromosomes.