Cow genome map

Conread name: Ss1.1-rthg26_l18.5

Conread position: 7-392
Cow position:
Alignm length: 406
Alignm identity: 268
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 5, 24

Conread position: 8-365
Cow position:
Alignm length: 373
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 125

Conread position: 9-350
Cow position:
Alignm length: 359
Alignm identity: 245
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 46, 198

Conread position: 11-269
Cow position:
Alignm length: 291
Alignm identity: 211
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 38, 198

Conread position: 11-311
Cow position:
Alignm length: 322
Alignm identity: 214
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 40, 31

Conread position: 11-395
Cow position:
Alignm length: 398
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 104

Conread position: 11-409
Cow position:
Alignm length: 413
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 183

Conread position: 11-409
Cow position:
Alignm length: 426
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 191

Conread position: 11-409
Cow position:
Alignm length: 429
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 193

Conread position: 11-409
Cow position:
Alignm length: 427
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 192

Conread position: 11-409
Cow position:
Alignm length: 420
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 179

Conread position: 11-409
Cow position:
Alignm length: 422
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 90

Conread position: 11-409
Cow position:
Alignm length: 420
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 186

Conread position: 11-409
Cow position:
Alignm length: 420
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 26

Conread position: 11-409
Cow position:
Alignm length: 427
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 192

Conread position: 11-409
Cow position:
Alignm length: 425
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 191

Conread position: 11-409
Cow position:
Alignm length: 418
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 190

Conread position: 11-409
Cow position:
Alignm length: 424
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 194

Conread position: 11-409
Cow position:
Alignm length: 424
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 189

Conread position: 11-409
Cow position:
Alignm length: 424
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 188

Conread position: 11-409
Cow position:
Alignm length: 415
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 186

Conread position: 11-409
Cow position:
Alignm length: 420
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 185

Conread position: 11-409
Cow position:
Alignm length: 427
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 195

Conread position: 11-409
Cow position:
Alignm length: 414
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 59

Conread position: 11-409
Cow position:
Alignm length: 425
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 190

Conread position: 14-335
Cow position:
Alignm length: 346
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 186

Conread position: 14-409
Cow position:
Alignm length: 422
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 181

Conread position: 14-409
Cow position:
Alignm length: 427
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 45

Conread position: 15-409
Cow position:
Alignm length: 423
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 188

Conread position: 20-346
Cow position:
Alignm length: 350
Alignm identity: 234
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 37, 171

Conread position: 23-323
Cow position:
Alignm length: 322
Alignm identity: 222
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 40, 307

Conread position: 23-381
Cow position:
Alignm length: 381
Alignm identity: 262
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 29, 243

Conread position: 46-409
Cow position:
Alignm length: 382
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 19

Conread position: 48-409
Cow position:
Alignm length: 379
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 144

Conread position: 49-409
Cow position:
Alignm length: 378
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 17

Conread position: 49-409
Cow position:
Alignm length: 394
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 23

Conread position: 56-376
Cow position:
Alignm length: 339
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 8

Conread position: 56-409
Cow position:
Alignm length: 371
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 8

Conread position: 61-409
Cow position:
Alignm length: 368
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 130

Conread position: 63-189
Cow position:
Alignm length: 137
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 128

Conread position: 63-215
Cow position:
Alignm length: 157
Alignm identity: 114
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 102, 122

Conread position: 63-293
Cow position:
Alignm length: 251
Alignm identity: 176
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 56, 0

Conread position: 63-304
Cow position:
Alignm length: 255
Alignm identity: 178
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 59, 142

Conread position: 63-306
Cow position:
Alignm length: 260
Alignm identity: 196
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 56, 129

Conread position: 63-373
Cow position:
Alignm length: 317
Alignm identity: 210
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 62, 111

Conread position: 63-378
Cow position:
Alignm length: 330
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 127

Conread position: 63-386
Cow position:
Alignm length: 340
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 132

Conread position: 63-405
Cow position:
Alignm length: 362
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 7

Conread position: 63-407
Cow position:
Alignm length: 356
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 100

Conread position: 63-408
Cow position:
Alignm length: 354
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 64

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 360
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 365
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 129

Conread position: 63-409
Cow position:
Alignm length: 354
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 74

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 348
Alignm identity: 243
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 322, 42

Conread position: 63-409
Cow position:
Alignm length: 365
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 362
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 299

Conread position: 63-409
Cow position:
Alignm length: 365
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 130

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 128

Conread position: 63-409
Cow position:
Alignm length: 360
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 130

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 130

Conread position: 63-409
Cow position:
Alignm length: 355
Alignm identity: 246
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 119, 50

Conread position: 63-409
Cow position:
Alignm length: 360
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 78

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 129

Conread position: 63-409
Cow position:
Alignm length: 363
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 195

Conread position: 63-409
Cow position:
Alignm length: 366
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 104

Conread position: 63-409
Cow position:
Alignm length: 363
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 33

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 130

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-412
Cow position:
Alignm length: 366
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 129

Conread position: 63-414
Cow position:
Alignm length: 369
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-418
Cow position:
Alignm length: 365
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 130

Conread position: 63-434
Cow position:
Alignm length: 388
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 64-409
Cow position:
Alignm length: 357
Alignm identity: 255
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 62, 31

Conread position: 64-409
Cow position:
Alignm length: 356
Alignm identity: 250
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 7, 121

Conread position: 65-329
Cow position:
Alignm length: 288
Alignm identity: 207
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 56, 127

Conread position: 65-409
Cow position:
Alignm length: 354
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 119

Conread position: 66-391
Cow position:
Alignm length: 345
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 125

Conread position: 66-398
Cow position:
Alignm length: 350
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 126

Conread position: 66-411
Cow position:
Alignm length: 365
Alignm identity: 242
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 43, 128

Conread position: 78-405
Cow position:
Alignm length: 350
Alignm identity: 247
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 43, 17

Conread position: 80-409
Cow position:
Alignm length: 341
Alignm identity: 233
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 44, 112

Conread position: 83-395
Cow position:
Alignm length: 326
Alignm identity: 233
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 39, 112

Conread position: 129-411
Cow position:
Alignm length: 286
Alignm identity: 204
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 83, 56

Conread position: 132-411
Cow position:
Alignm length: 287
Alignm identity: 202
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 82, 53

Conread position: 134-409
Cow position:
Alignm length: 283
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 48

Conread position: 136-412
Cow position:
Alignm length: 284
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 46

Conread position: 137-356
Cow position:
Alignm length: 220
Alignm identity: 151
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 138-370
Cow position:
Alignm length: 233
Alignm identity: 180
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 34, 0

Conread position: 166-392
Cow position:
Alignm length: 234
Alignm identity: 164
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 17, 0

Conread position: 179-409
Cow position:
Alignm length: 232
Alignm identity: 164
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 196, 10

Conread position: 185-405
Cow position:
Alignm length: 222
Alignm identity: 148
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 200, 19

Conread position: 189-373
Cow position:
Alignm length: 185
Alignm identity: 144
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 120, 0

Conread position: 189-414
Cow position:
Alignm length: 227
Alignm identity: 160
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 196, 26

Conread position: 198-409
Cow position:
Alignm length: 217
Alignm identity: 154
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 159, 12

Conread position: 205-368
Cow position:
Alignm length: 166
Alignm identity: 127
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 71, 131

Conread position: 205-409
Cow position:
Alignm length: 206
Alignm identity: 115
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 180, 143

Conread position: 207-409
Cow position:
Alignm length: 204
Alignm identity: 156
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 27, 143

Conread position: 210-409
Cow position:
Alignm length: 205
Alignm identity: 151
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 41, 143

Conread position: 225-409
Cow position:
Alignm length: 186
Alignm identity: 141
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 160, 58

Conread position: 260-409
Cow position:
Alignm length: 151
Alignm identity: 123
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 125, 83

Conread position: 267-409
Cow position:
Alignm length: 144
Alignm identity: 116
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 117, 82

Show alignments to all cow chromosomes.