Cow genome map

Conread name: Ss1.1-rthg26_l18.5

Conread position: 5-409
Cow position:
Alignm length: 431
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 193

Conread position: 5-409
Cow position:
Alignm length: 435
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 199

Conread position: 7-380
Cow position:
Alignm length: 386
Alignm identity: 248
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 5, 130

Conread position: 7-390
Cow position:
Alignm length: 402
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 190

Conread position: 7-409
Cow position:
Alignm length: 430
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 194

Conread position: 11-264
Cow position:
Alignm length: 280
Alignm identity: 202
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 50, 191

Conread position: 11-373
Cow position:
Alignm length: 388
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 190

Conread position: 11-395
Cow position:
Alignm length: 406
Alignm identity: 262
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 219

Conread position: 11-408
Cow position:
Alignm length: 428
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 195

Conread position: 11-409
Cow position:
Alignm length: 414
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 105

Conread position: 11-409
Cow position:
Alignm length: 419
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 185

Conread position: 11-409
Cow position:
Alignm length: 420
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 187

Conread position: 11-409
Cow position:
Alignm length: 423
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 174

Conread position: 11-409
Cow position:
Alignm length: 427
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 192

Conread position: 11-409
Cow position:
Alignm length: 427
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 192

Conread position: 11-409
Cow position:
Alignm length: 424
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 189

Conread position: 11-409
Cow position:
Alignm length: 428
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 193

Conread position: 11-409
Cow position:
Alignm length: 428
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 193

Conread position: 11-409
Cow position:
Alignm length: 423
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 49

Conread position: 11-409
Cow position:
Alignm length: 414
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 123

Conread position: 11-409
Cow position:
Alignm length: 425
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 169

Conread position: 11-409
Cow position:
Alignm length: 427
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 191

Conread position: 11-409
Cow position:
Alignm length: 428
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 190

Conread position: 11-410
Cow position:
Alignm length: 420
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 184

Conread position: 11-411
Cow position:
Alignm length: 425
Alignm identity: 273
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 44, 112

Conread position: 13-409
Cow position:
Alignm length: 421
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 190

Conread position: 14-390
Cow position:
Alignm length: 408
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 187

Conread position: 14-405
Cow position:
Alignm length: 413
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 186

Conread position: 14-409
Cow position:
Alignm length: 415
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 29

Conread position: 14-409
Cow position:
Alignm length: 420
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 50

Conread position: 14-409
Cow position:
Alignm length: 423
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 188

Conread position: 14-409
Cow position:
Alignm length: 421
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 185

Conread position: 14-409
Cow position:
Alignm length: 428
Alignm identity: 296
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 34, 193

Conread position: 14-409
Cow position:
Alignm length: 409
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 178

Conread position: 14-409
Cow position:
Alignm length: 424
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 200

Conread position: 15-409
Cow position:
Alignm length: 410
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 184

Conread position: 20-388
Cow position:
Alignm length: 386
Alignm identity: 255
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 29, 154

Conread position: 21-409
Cow position:
Alignm length: 409
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 58

Conread position: 23-409
Cow position:
Alignm length: 404
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 174

Conread position: 26-373
Cow position:
Alignm length: 361
Alignm identity: 246
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 45, 23

Conread position: 44-393
Cow position:
Alignm length: 379
Alignm identity: 246
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 19, 150

Conread position: 47-331
Cow position:
Alignm length: 297
Alignm identity: 203
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 74, 17

Conread position: 48-411
Cow position:
Alignm length: 375
Alignm identity: 238
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 55, 12

Conread position: 49-298
Cow position:
Alignm length: 266
Alignm identity: 199
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 70, 13

Conread position: 49-411
Cow position:
Alignm length: 394
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 15

Conread position: 58-395
Cow position:
Alignm length: 355
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 137

Conread position: 63-326
Cow position:
Alignm length: 281
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 129

Conread position: 63-326
Cow position:
Alignm length: 269
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 83

Conread position: 63-350
Cow position:
Alignm length: 299
Alignm identity: 216
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 60, 24

Conread position: 63-353
Cow position:
Alignm length: 307
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 128

Conread position: 63-359
Cow position:
Alignm length: 314
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-375
Cow position:
Alignm length: 325
Alignm identity: 210
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 62, 24

Conread position: 63-405
Cow position:
Alignm length: 351
Alignm identity: 234
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 14, 63

Conread position: 63-406
Cow position:
Alignm length: 362
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 105

Conread position: 63-407
Cow position:
Alignm length: 362
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 13

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 129

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 359
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 132

Conread position: 63-409
Cow position:
Alignm length: 358
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 129

Conread position: 63-409
Cow position:
Alignm length: 363
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 299

Conread position: 63-409
Cow position:
Alignm length: 362
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 13

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 129

Conread position: 63-409
Cow position:
Alignm length: 365
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 354
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 99

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 360
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 129

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 359
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 10

Conread position: 63-410
Cow position:
Alignm length: 357
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 127

Conread position: 63-411
Cow position:
Alignm length: 366
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 132

Conread position: 63-413
Cow position:
Alignm length: 369
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 64-409
Cow position:
Alignm length: 356
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 129

Conread position: 64-409
Cow position:
Alignm length: 358
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 128

Conread position: 64-409
Cow position:
Alignm length: 356
Alignm identity: 252
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 60, 75

Conread position: 65-409
Cow position:
Alignm length: 362
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 127

Conread position: 65-409
Cow position:
Alignm length: 362
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 119

Conread position: 66-368
Cow position:
Alignm length: 316
Alignm identity: 206
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 59, 129

Conread position: 66-392
Cow position:
Alignm length: 333
Alignm identity: 232
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 5, 50

Conread position: 66-405
Cow position:
Alignm length: 353
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 226

Conread position: 66-409
Cow position:
Alignm length: 354
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 24

Conread position: 66-411
Cow position:
Alignm length: 356
Alignm identity: 235
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 13, 22

Conread position: 66-411
Cow position:
Alignm length: 364
Alignm identity: 249
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 59, 129

Conread position: 70-354
Cow position:
Alignm length: 303
Alignm identity: 208
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 40, 287

Conread position: 70-411
Cow position:
Alignm length: 356
Alignm identity: 232
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 40, 171

Conread position: 71-392
Cow position:
Alignm length: 338
Alignm identity: 224
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 50, 102

Conread position: 73-409
Cow position:
Alignm length: 354
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 119

Conread position: 81-411
Cow position:
Alignm length: 341
Alignm identity: 229
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 45, 115

Conread position: 83-435
Cow position:
Alignm length: 371
Alignm identity: 254
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 38, 110

Conread position: 86-309
Cow position:
Alignm length: 230
Alignm identity: 163
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 49, 105

Conread position: 93-409
Cow position:
Alignm length: 334
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 99

Conread position: 131-383
Cow position:
Alignm length: 261
Alignm identity: 173
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 102, 54

Conread position: 132-409
Cow position:
Alignm length: 279
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 50

Conread position: 135-409
Cow position:
Alignm length: 282
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 50

Conread position: 136-395
Cow position:
Alignm length: 266
Alignm identity: 180
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 58, 217

Conread position: 137-411
Cow position:
Alignm length: 282
Alignm identity: 187
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 76, 61

Conread position: 138-392
Cow position:
Alignm length: 256
Alignm identity: 173
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 249, 47

Conread position: 138-411
Cow position:
Alignm length: 276
Alignm identity: 182
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 205, 18

Conread position: 156-409
Cow position:
Alignm length: 256
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 26

Conread position: 188-411
Cow position:
Alignm length: 228
Alignm identity: 152
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 63, 163

Conread position: 193-388
Cow position:
Alignm length: 200
Alignm identity: 137
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 19, 158

Conread position: 199-383
Cow position:
Alignm length: 185
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 211-409
Cow position:
Alignm length: 200
Alignm identity: 149
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 174, 23

Conread position: 235-409
Cow position:
Alignm length: 176
Alignm identity: 128
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 148, 113

Conread position: 237-409
Cow position:
Alignm length: 174
Alignm identity: 128
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 148, 102

Conread position: 241-409
Cow position:
Alignm length: 170
Alignm identity: 128
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 144, 26

Show alignments to all cow chromosomes.