Cow genome map

Conread name: Ss1.1-rthg26_l18.5

Conread position: 7-408
Cow position:
Alignm length: 434
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 195

Conread position: 11-254
Cow position:
Alignm length: 266
Alignm identity: 185
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 48, 187

Conread position: 11-254
Cow position:
Alignm length: 265
Alignm identity: 191
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 185

Conread position: 11-296
Cow position:
Alignm length: 313
Alignm identity: 225
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 41, 189

Conread position: 11-319
Cow position:
Alignm length: 324
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 90

Conread position: 11-379
Cow position:
Alignm length: 382
Alignm identity: 256
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 46, 192

Conread position: 11-406
Cow position:
Alignm length: 424
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 191

Conread position: 11-407
Cow position:
Alignm length: 422
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 188

Conread position: 11-408
Cow position:
Alignm length: 428
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 165

Conread position: 11-409
Cow position:
Alignm length: 424
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 101

Conread position: 11-409
Cow position:
Alignm length: 428
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 190

Conread position: 11-409
Cow position:
Alignm length: 428
Alignm identity: 296
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 32, 192

Conread position: 11-409
Cow position:
Alignm length: 417
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 102

Conread position: 11-409
Cow position:
Alignm length: 427
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 192

Conread position: 11-409
Cow position:
Alignm length: 422
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 101

Conread position: 11-409
Cow position:
Alignm length: 418
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 53

Conread position: 11-409
Cow position:
Alignm length: 420
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 188

Conread position: 11-409
Cow position:
Alignm length: 423
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 189

Conread position: 11-409
Cow position:
Alignm length: 428
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 192

Conread position: 11-409
Cow position:
Alignm length: 427
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 192

Conread position: 11-409
Cow position:
Alignm length: 427
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 102

Conread position: 11-409
Cow position:
Alignm length: 425
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 190

Conread position: 11-409
Cow position:
Alignm length: 417
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 188

Conread position: 11-409
Cow position:
Alignm length: 426
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 191

Conread position: 11-409
Cow position:
Alignm length: 426
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 363

Conread position: 11-411
Cow position:
Alignm length: 428
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 191

Conread position: 11-411
Cow position:
Alignm length: 429
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 192

Conread position: 11-412
Cow position:
Alignm length: 430
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 192

Conread position: 11-414
Cow position:
Alignm length: 431
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 191

Conread position: 14-352
Cow position:
Alignm length: 366
Alignm identity: 254
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 35, 187

Conread position: 14-395
Cow position:
Alignm length: 414
Alignm identity: 284
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 35, 183

Conread position: 15-269
Cow position:
Alignm length: 279
Alignm identity: 193
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 35, 190

Conread position: 15-409
Cow position:
Alignm length: 421
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 185

Conread position: 17-373
Cow position:
Alignm length: 380
Alignm identity: 259
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 42, 15

Conread position: 19-309
Cow position:
Alignm length: 316
Alignm identity: 229
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 42, 182

Conread position: 20-382
Cow position:
Alignm length: 390
Alignm identity: 265
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 23, 185

Conread position: 23-392
Cow position:
Alignm length: 380
Alignm identity: 252
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 32, 108

Conread position: 32-384
Cow position:
Alignm length: 367
Alignm identity: 252
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 14, 27

Conread position: 46-409
Cow position:
Alignm length: 378
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 50

Conread position: 48-380
Cow position:
Alignm length: 348
Alignm identity: 234
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 78, 18

Conread position: 48-390
Cow position:
Alignm length: 357
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 16

Conread position: 56-409
Cow position:
Alignm length: 368
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 8

Conread position: 60-290
Cow position:
Alignm length: 241
Alignm identity: 171
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 61, 19

Conread position: 63-221
Cow position:
Alignm length: 169
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 126

Conread position: 63-387
Cow position:
Alignm length: 342
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-395
Cow position:
Alignm length: 346
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-402
Cow position:
Alignm length: 356
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 129

Conread position: 63-407
Cow position:
Alignm length: 363
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 129

Conread position: 63-409
Cow position:
Alignm length: 370
Alignm identity: 259
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 58, 32

Conread position: 63-409
Cow position:
Alignm length: 357
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 128

Conread position: 63-409
Cow position:
Alignm length: 367
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 365
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 129

Conread position: 63-409
Cow position:
Alignm length: 355
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 13

Conread position: 63-409
Cow position:
Alignm length: 360
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 123

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 367
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 131

Conread position: 63-409
Cow position:
Alignm length: 374
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 302

Conread position: 63-409
Cow position:
Alignm length: 377
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 129

Conread position: 63-409
Cow position:
Alignm length: 365
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 354
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 56

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 367
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 365
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 129

Conread position: 63-409
Cow position:
Alignm length: 362
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 7

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 365
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 366
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 365
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 130

Conread position: 63-409
Cow position:
Alignm length: 362
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 130

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 309

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 128

Conread position: 63-410
Cow position:
Alignm length: 362
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-412
Cow position:
Alignm length: 361
Alignm identity: 244
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 58, 132

Conread position: 64-409
Cow position:
Alignm length: 360
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 124

Conread position: 64-409
Cow position:
Alignm length: 359
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 128

Conread position: 64-410
Cow position:
Alignm length: 356
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 62

Conread position: 66-409
Cow position:
Alignm length: 372
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 124

Conread position: 70-411
Cow position:
Alignm length: 354
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 124

Conread position: 73-409
Cow position:
Alignm length: 346
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 274

Conread position: 78-410
Cow position:
Alignm length: 364
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 232

Conread position: 83-409
Cow position:
Alignm length: 353
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 107

Conread position: 91-409
Cow position:
Alignm length: 336
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 101

Conread position: 96-409
Cow position:
Alignm length: 330
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 247

Conread position: 132-409
Cow position:
Alignm length: 285
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 50

Conread position: 160-409
Cow position:
Alignm length: 259
Alignm identity: 185
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 54, 25

Conread position: 172-411
Cow position:
Alignm length: 247
Alignm identity: 168
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 41, 13

Conread position: 175-409
Cow position:
Alignm length: 236
Alignm identity: 170
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 88, 7

Conread position: 190-395
Cow position:
Alignm length: 208
Alignm identity: 157
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 102, 18

Conread position: 190-409
Cow position:
Alignm length: 223
Alignm identity: 168
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 9, 160

Conread position: 195-405
Cow position:
Alignm length: 212
Alignm identity: 158
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 190, 0

Conread position: 195-407
Cow position:
Alignm length: 215
Alignm identity: 167
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 23, 154

Conread position: 197-391
Cow position:
Alignm length: 197
Alignm identity: 135
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 7, 152

Conread position: 204-352
Cow position:
Alignm length: 151
Alignm identity: 112
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 128, 0

Conread position: 206-367
Cow position:
Alignm length: 162
Alignm identity: 119
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 217-392
Cow position:
Alignm length: 177
Alignm identity: 129
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 168, 131

Conread position: 229-414
Cow position:
Alignm length: 189
Alignm identity: 144
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 129, 181

Conread position: 250-410
Cow position:
Alignm length: 161
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 93, 0

Conread position: 259-411
Cow position:
Alignm length: 154
Alignm identity: 112
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 126, 94

Conread position: 297-409
Cow position:
Alignm length: 114
Alignm identity: 91
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 88, 52

Show alignments to all cow chromosomes.