Cow genome map

Conread name: Ss1.1-rton1204b_e11.5

Conread position: 10-660
Cow position: chr5:20026977-20026339 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 572
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 420

Conread position: 183-660
Cow position: chr5:20195284-20194810 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 42

Conread position: 213-660
Cow position: chr5:20137047-20136603 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 289
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 149, 105

Conread position: 223-660
Cow position: chr5:19974756-19974337 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 0

Conread position: 223-660
Cow position: chr5:19990638-19990219 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 0

Conread position: 223-660
Cow position: chr5:20009485-20009066 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 0

Conread position: 251-663
Cow position: chr5:20264621-20264209 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 67

Conread position: 256-660
Cow position: chr5:20233779-20233336 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 61

Conread position: 272-675
Cow position: chr5:20217047-20216673 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 274
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 81, 45

Conread position: 326-663
Cow position: chr5:20285204-20284858 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 234
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 161, 0

Conread position: 357-659
Cow position: chr5:19853765-19853466 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 202
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 108, 150

Conread position: 375-660
Cow position: chr5:19903294-19903015 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 399-660
Cow position: chr5:20303668-20303407 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 40

Conread position: 417-660
Cow position: chr5:20062794-20062551 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 179
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 60, 48

Conread position: 443-674
Cow position: chr5:19760062-19759840 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 161
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 448-660
Cow position: chr5:20323106-20322891 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 169
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 28, 38

Conread position: 448-686
Cow position: chr5:20123843-20123607 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 182
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 29, 17

Conread position: 449-667
Cow position: chr5:20080182-20079964 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 166
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 53, 16

Conread position: 458-674
Cow position: chr5:19768267-19768477 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 48, 0

Conread position: 466-667
Cow position: chr5:20336714-20336514 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 30, 18

Conread position: 500-673
Cow position: chr5:20103688-20103517 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 161, 0

Conread position: 512-660
Cow position: chr5:19891503-19891355 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 128
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 535-659
Cow position: chr5:19835460-19835336 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 535-670
Cow position: chr5:19805105-19805239 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 127, 0

Conread position: 535-674
Cow position: chr5:19671708-19671569 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 535-674
Cow position: chr5:19686813-19686952 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 535-674
Cow position: chr5:19789154-19789015 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 642-866
Cow position: chr5:19902501-19902276 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 656-874
Cow position: chr5:19687701-19687913 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 149
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 73, 0

Conread position: 656-874
Cow position: chr5:19758651-19758439 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 149
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 656-874
Cow position: chr5:19769196-19769408 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 149
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 656-874
Cow position: chr5:19833638-19833426 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 48

Conread position: 656-874
Cow position: chr5:19852264-19852052 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 149
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 67, 0

Conread position: 656-874
Cow position: chr5:19872573-19872361 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 151
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 66, 0

Conread position: 656-874
Cow position: chr5:19889019-19888807 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 172
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 68, 0

Conread position: 656-874
Cow position: chr5:19989365-19989147 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 656-874
Cow position: chr5:20008150-20007932 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 656-874
Cow position: chr5:20025781-20025563 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 656-874
Cow position: chr5:20060092-20059874 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 168
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 76, 85

Conread position: 656-874
Cow position: chr5:20079378-20079160 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 166
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 76, 81

Conread position: 656-874
Cow position: chr5:20101335-20101117 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 76, 85

Conread position: 656-874
Cow position: chr5:20122385-20122167 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 168
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 68, 85

Conread position: 656-874
Cow position: chr5:20211232-20211014 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 156, 163

Conread position: 656-874
Cow position: chr5:20283832-20283608 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 656-874
Cow position: chr5:20321067-20320843 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 656-874
Cow position: chr5:20378021-20377809 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 163
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 155, 66

Conread position: 656-875
Cow position: chr5:20193743-20193524 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 148
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 130, 136

Conread position: 656-877
Cow position: chr5:20231571-20231344 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 171
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 68, 0

Conread position: 656-877
Cow position: chr5:20336160-20335939 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 73, 82

Conread position: 656-880
Cow position: chr5:20301779-20301555 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 165
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 89, 78

Conread position: 679-875
Cow position: chr5:19973390-19973199 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 117, 157

Conread position: 932-1030
Cow position: chr5:20024851-20024753 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 89
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 932-1030
Cow position: chr5:20300098-20300000 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1019-1194
Cow position: chr5:20316196-20316021 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 1029-1194
Cow position: chr5:19882984-19882819 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 139
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 1029-1194
Cow position: chr5:19900049-19899884 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 139
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 1029-1194
Cow position: chr5:19988385-19988220 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 139
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 1029-1194
Cow position: chr5:20007175-20007010 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 140
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 1029-1194
Cow position: chr5:20024145-20023980 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 154
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1029-1194
Cow position: chr5:20058405-20058240 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1029-1194
Cow position: chr5:20077602-20077437 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1029-1194
Cow position: chr5:20097218-20097053 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1029-1194
Cow position: chr5:20119805-20119640 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 129
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 1029-1194
Cow position: chr5:20192520-20192355 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 1029-1194
Cow position: chr5:20208186-20208021 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 135, 141

Conread position: 1029-1194
Cow position: chr5:20229346-20229181 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 131
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 1029-1194
Cow position: chr5:20260138-20259973 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 131
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 1029-1194
Cow position: chr5:20282300-20282135 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 140
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 1029-1194
Cow position: chr5:20299440-20299275 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 135
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 1029-1194
Cow position: chr5:20333260-20333095 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 85, 80

Conread position: 1038-1189
Cow position: chr5:19868708-19868557 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1040-1194
Cow position: chr5:20375997-20375843 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 132
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 1042-1194
Cow position: chr5:19678217-19678369 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1042-1194
Cow position: chr5:19689278-19689430 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1045-1194
Cow position: chr5:19812269-19812418 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1045-1194
Cow position: chr5:19850028-19849879 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1051-1194
Cow position: chr5:19756521-19756378 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1055-1194
Cow position: chr5:19771389-19771528 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1055-1194
Cow position: chr5:19785503-19785364 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1055-1194
Cow position: chr5:19831871-19831732 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1190-1320
Cow position: chr5:19882047-19881917 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1193-1320
Cow position: chr5:19897946-19897819 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 111
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 1193-1320
Cow position: chr5:19987792-19987665 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 106
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 1193-1320
Cow position: chr5:20006566-20006439 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 106
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 1193-1320
Cow position: chr5:20023633-20023506 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 113
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 1200-1320
Cow position: chr5:20259860-20259740 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 93
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1201-1330
Cow position: chr5:20281721-20281591 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 120, 0

Conread position: 1317-1541
Cow position: chr5:19881474-19881250 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1317-1541
Cow position: chr5:20314760-20314536 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1318-1536
Cow position: chr5:19830955-19830737 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1318-1536
Cow position: chr5:19864147-19863929 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1318-1539
Cow position: chr5:19570252-19570031 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1318-1539
Cow position: chr5:19818626-19818847 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1318-1539
Cow position: chr5:20374691-20374470 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 75

Conread position: 1318-1541
Cow position: chr5:20116545-20116322 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 51

Conread position: 1318-1549
Cow position: chr5:19849140-19848910 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 56

Conread position: 1318-1553
Cow position: chr5:19897680-19897446 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 0

Conread position: 1318-1556
Cow position: chr5:20074398-20074160 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 225

Conread position: 1318-1556
Cow position: chr5:20298365-20298128 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 0

Conread position: 1318-1560
Cow position: chr5:20093857-20093615 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 51

Conread position: 1319-1548
Cow position: chr5:19986849-19986621 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 0

Conread position: 1319-1548
Cow position: chr5:20005647-20005419 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 0

Conread position: 1319-1556
Cow position: chr5:20023278-20023043 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 0

Conread position: 1324-1541
Cow position: chr5:20281287-20281070 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1324-1541
Cow position: chr5:20330327-20330110 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 97

Conread position: 1324-1550
Cow position: chr5:20259100-20258875 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 0

Conread position: 1324-1551
Cow position: chr5:20227366-20227139 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1325-1533
Cow position: chr5:19679020-19679222 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 160
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 118, 141

Conread position: 1325-1536
Cow position: chr5:19690081-19690292 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1325-1536
Cow position: chr5:19755773-19755562 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1325-1536
Cow position: chr5:19784717-19784506 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1325-1541
Cow position: chr5:20057303-20057087 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1330-1541
Cow position: chr5:20191535-20191324 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1337-1550
Cow position: chr5:20131447-20131235 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 1346-1536
Cow position: chr5:19772125-19772315 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 161
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1374-1541
Cow position: chr5:19746396-19746564 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 143
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 10, 32

Conread position: 1404-1552
Cow position: chr5:24472601-24472748 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 139, 0

Conread position: 1579-2237
Cow position: chr5:20021620-20020951 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 571
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 160

Show alignments to all cow chromosomes.