Cow genome map


           Conread name:
           Ss1.1-rton1215b_c21.5
        

               Conread position:
               23-248
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 110
               

               Conread position:
               24-248
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               24-248
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               24-248
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 109
               

               Conread position:
               24-248
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 109
               

               Conread position:
               24-258
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               226, 0
               

               Conread position:
               25-239
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               102, 107
               

               Conread position:
               25-241
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               164
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               102, 108
               

               Conread position:
               25-241
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               166
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               102, 108
               

               Conread position:
               25-241
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               166
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               102, 15
               

               Conread position:
               25-241
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               167
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               102, 108
               

               Conread position:
               25-248
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 108
               

               Conread position:
               25-248
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               29-248
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 64
               

               Conread position:
               29-248
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 64
               

               Conread position:
               29-248
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 64
               

               Conread position:
               29-263
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 106
               

               Conread position:
               31-241
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               96, 102
               

               Conread position:
               31-248
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 97
               

               Conread position:
               31-248
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 44
               

               Conread position:
               31-248
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 44
               

               Conread position:
               32-241
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               160
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               95, 101
               

               Conread position:
               32-248
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               168
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               95, 101
               

               Conread position:
               32-248
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               43, 48
               

               Conread position:
               37-248
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               167
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               51-248
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               157
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               54-248
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               157
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               73, 79
               

               Conread position:
               57-248
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               156
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               70, 76
               

               Conread position:
               80-248
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               10, 53
               

               Conread position:
               134-248
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               285-454
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               386-543
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.