Cow genome map
| Conread name: | Ss1.1-rton1221b_b21.5 |
| Conread position: | 3-130 |
| Cow position: | chr5:19990347-19990220 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-130 |
| Cow position: | chr5:20026467-20026340 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-130 |
| Cow position: | chr5:20303535-20303408 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-138 |
| Cow position: | chr5:20336649-20336514 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 123 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-130 |
| Cow position: | chr5:20009190-20009067 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 112-306 |
| Cow position: | chr5:20101349-20101156 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 175, 16 |
| Conread position: | 127-338 |
| Cow position: | chr5:20060092-20059881 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 160, 164 |
| Conread position: | 127-338 |
| Cow position: | chr5:20079378-20079167 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 160, 165 |
| Conread position: | 127-338 |
| Cow position: | chr5:20122385-20122174 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 160, 164 |
| Conread position: | 127-345 |
| Cow position: | chr5:19989365-19989147 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 84, 75 |
| Conread position: | 127-345 |
| Cow position: | chr5:20008150-20007932 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 127-345 |
| Cow position: | chr5:20025781-20025563 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 84, 75 |
| Conread position: | 127-345 |
| Cow position: | chr5:20321067-20320843 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 127-348 |
| Cow position: | chr5:20301779-20301558 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 81, 73 |
| Conread position: | 127-348 |
| Cow position: | chr5:20336160-20335939 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 127-361 |
| Cow position: | chr5:19902486-19902252 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 80, 73 |
| Conread position: | 403-501 |
| Cow position: | chr5:20334165-20334067 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 85 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 501-610 |
| Cow position: | chr5:20333259-20333150 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.