Cow genome map
Conread name: | Ss1.1-rtra04_n22.5 |
Conread position: | 684-908 |
Cow position: | chr11:16210289-16210518 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 175 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 24, 195 |
Conread position: | 706-966 |
Cow position: | chr11:8173201-8172943 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 5 |
Conread position: | 711-890 |
Cow position: | chr11:55386552-55386375 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 134 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 63, 29 |
Conread position: | 711-893 |
Cow position: | chr11:43062334-43062516 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 140 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 63, 35 |
Conread position: | 711-893 |
Cow position: | chr11:62034854-62035033 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 137 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 40, 53 |
Conread position: | 711-893 |
Cow position: | chr11:84783860-84783669 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 140 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 711-995 |
Cow position: | chr11:48448410-48448141 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 211 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 63, 29 |
Conread position: | 713-893 |
Cow position: | chr11:43078041-43078226 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 144 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 61, 34 |
Conread position: | 713-1024 |
Cow position: | chr11:57527731-57528056 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 237 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 61, 27 |
Conread position: | 713-1053 |
Cow position: | chr11:82584941-82585292 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 252 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 61, 72 |
Conread position: | 716-962 |
Cow position: | chr11:8014082-8014322 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 184 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 29, 50 |
Conread position: | 720-893 |
Cow position: | chr11:20555608-20555776 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 131 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 54, 18 |
Conread position: | 720-1026 |
Cow position: | chr11:16102095-16102395 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 20 |
Conread position: | 722-975 |
Cow position: | chr11:17243236-17243481 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 199 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 18 |
Conread position: | 722-1050 |
Cow position: | chr11:24209877-24209558 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 157 |
Conread position: | 723-908 |
Cow position: | chr11:74915670-74915855 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 144 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 31, 17 |
Conread position: | 723-1053 |
Cow position: | chr11:73308607-73308266 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 23 |
Conread position: | 725-1074 |
Cow position: | chr11:29965858-29966192 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 243 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 26, 96 |
Conread position: | 727-891 |
Cow position: | chr11:34443755-34443591 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 133 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 47, 19 |
Conread position: | 729-915 |
Cow position: | chr11:82530404-82530589 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 144 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 51, 22 |
Conread position: | 739-898 |
Cow position: | chr11:2772013-2772173 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 125 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 39, 139 |
Conread position: | 741-893 |
Cow position: | chr11:26085319-26085472 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 124 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 37, 137 |
Conread position: | 746-893 |
Cow position: | chr11:34039738-34039588 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 121 |
Alignm E-value: | 9e-29 |
Alignm gaps (pig, cow): | 33, 134 |
Conread position: | 751-892 |
Cow position: | chr11:37936064-37935922 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 110 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 23, 127 |
Conread position: | 751-894 |
Cow position: | chr11:62702212-62702068 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 119 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 23, 127 |
Conread position: | 768-1043 |
Cow position: | chr11:48961818-48962108 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 210 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 6, 87 |
Conread position: | 771-1044 |
Cow position: | chr11:21905288-21905560 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 194 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 155, 41 |
Conread position: | 779-987 |
Cow position: | chr11:43885980-43885775 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 169 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 99 |
Conread position: | 780-908 |
Cow position: | chr11:58902895-58902768 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 106 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 35, 93 |
Conread position: | 784-975 |
Cow position: | chr11:28082567-28082750 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 153 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 42, 64 |
Conread position: | 807-1042 |
Cow position: | chr11:81485046-81485289 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 186 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 8, 72 |
Conread position: | 818-919 |
Cow position: | chr11:48049134-48049034 (view UCSC Genome Browser custom track) |
Alignm length: | 102 |
Alignm identity: | 87 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 827-974 |
Cow position: | chr11:44696943-44697090 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 119 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 99, 50 |
Conread position: | 863-1042 |
Cow position: | chr11:23034336-23034150 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 138 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 9, 66 |
Conread position: | 886-1042 |
Cow position: | chr11:43062477-43062639 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 127 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 61, 42 |
Conread position: | 1041-1364 |
Cow position: | chr11:9240889-9241226 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 228 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 1041-1366 |
Cow position: | chr11:81453937-81454255 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 220 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 26, 94 |
Conread position: | 1044-1368 |
Cow position: | chr11:26443583-26443898 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 223 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 23, 50 |
Conread position: | 1046-1243 |
Cow position: | chr11:38183293-38183493 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 148 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 8, 174 |
Conread position: | 1049-1207 |
Cow position: | chr11:20582361-20582199 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 120 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 18, 104 |
Conread position: | 1049-1364 |
Cow position: | chr11:38923625-38923942 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 211 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 18, 100 |
Conread position: | 1050-1348 |
Cow position: | chr11:51045152-51044847 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 215 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 18, 157 |
Conread position: | 1053-1364 |
Cow position: | chr11:28498289-28497971 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 220 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 24, 193 |
Show alignments to all cow chromosomes.