Cow genome map

Conread name: Ss1.1-rtra04_n22.5

Conread position: 684-908
Cow position:
Alignm length: 231
Alignm identity: 175
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 24, 195

Conread position: 706-966
Cow position:
Alignm length: 268
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 5

Conread position: 711-890
Cow position:
Alignm length: 182
Alignm identity: 134
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 63, 29

Conread position: 711-893
Cow position:
Alignm length: 185
Alignm identity: 140
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 63, 35

Conread position: 711-893
Cow position:
Alignm length: 186
Alignm identity: 137
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 40, 53

Conread position: 711-893
Cow position:
Alignm length: 192
Alignm identity: 140
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 711-995
Cow position:
Alignm length: 288
Alignm identity: 211
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 63, 29

Conread position: 713-893
Cow position:
Alignm length: 190
Alignm identity: 144
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 61, 34

Conread position: 713-1024
Cow position:
Alignm length: 337
Alignm identity: 237
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 61, 27

Conread position: 713-1053
Cow position:
Alignm length: 357
Alignm identity: 252
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 61, 72

Conread position: 716-962
Cow position:
Alignm length: 251
Alignm identity: 184
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 29, 50

Conread position: 720-893
Cow position:
Alignm length: 177
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 54, 18

Conread position: 720-1026
Cow position:
Alignm length: 311
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 20

Conread position: 722-975
Cow position:
Alignm length: 256
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 18

Conread position: 722-1050
Cow position:
Alignm length: 335
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 157

Conread position: 723-908
Cow position:
Alignm length: 189
Alignm identity: 144
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 31, 17

Conread position: 723-1053
Cow position:
Alignm length: 345
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 23

Conread position: 725-1074
Cow position:
Alignm length: 358
Alignm identity: 243
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 26, 96

Conread position: 727-891
Cow position:
Alignm length: 167
Alignm identity: 133
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 47, 19

Conread position: 729-915
Cow position:
Alignm length: 190
Alignm identity: 144
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 51, 22

Conread position: 739-898
Cow position:
Alignm length: 162
Alignm identity: 125
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 39, 139

Conread position: 741-893
Cow position:
Alignm length: 155
Alignm identity: 124
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 37, 137

Conread position: 746-893
Cow position:
Alignm length: 152
Alignm identity: 121
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 33, 134

Conread position: 751-892
Cow position:
Alignm length: 144
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 23, 127

Conread position: 751-894
Cow position:
Alignm length: 146
Alignm identity: 119
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 23, 127

Conread position: 768-1043
Cow position:
Alignm length: 295
Alignm identity: 210
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 6, 87

Conread position: 771-1044
Cow position:
Alignm length: 285
Alignm identity: 194
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 155, 41

Conread position: 779-987
Cow position:
Alignm length: 210
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 99

Conread position: 780-908
Cow position:
Alignm length: 131
Alignm identity: 106
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 35, 93

Conread position: 784-975
Cow position:
Alignm length: 195
Alignm identity: 153
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 42, 64

Conread position: 807-1042
Cow position:
Alignm length: 246
Alignm identity: 186
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 8, 72

Conread position: 818-919
Cow position:
Alignm length: 102
Alignm identity: 87
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 827-974
Cow position:
Alignm length: 150
Alignm identity: 119
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 99, 50

Conread position: 863-1042
Cow position:
Alignm length: 189
Alignm identity: 138
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 66

Conread position: 886-1042
Cow position:
Alignm length: 165
Alignm identity: 127
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 61, 42

Conread position: 1041-1364
Cow position:
Alignm length: 338
Alignm identity: 228
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 16, 0

Conread position: 1041-1366
Cow position:
Alignm length: 331
Alignm identity: 220
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 26, 94

Conread position: 1044-1368
Cow position:
Alignm length: 331
Alignm identity: 223
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 23, 50

Conread position: 1046-1243
Cow position:
Alignm length: 206
Alignm identity: 148
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 8, 174

Conread position: 1049-1207
Cow position:
Alignm length: 164
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 104

Conread position: 1049-1364
Cow position:
Alignm length: 325
Alignm identity: 211
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 18, 100

Conread position: 1050-1348
Cow position:
Alignm length: 310
Alignm identity: 215
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 18, 157

Conread position: 1053-1364
Cow position:
Alignm length: 325
Alignm identity: 220
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 24, 193

Show alignments to all cow chromosomes.