Cow genome map
| Conread name: | Ss1.1-rtra04_n22.5 |
| Conread position: | 705-1041 |
| Cow position: | chr14:37199857-37199521 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 35 |
| Conread position: | 711-893 |
| Cow position: | chr14:4403011-4403183 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 63, 29 |
| Conread position: | 711-893 |
| Cow position: | chr14:24160001-24159822 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 67, 14 |
| Conread position: | 711-893 |
| Cow position: | chr14:26592006-26592194 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 63, 29 |
| Conread position: | 711-893 |
| Cow position: | chr14:47605418-47605228 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 63, 174 |
| Conread position: | 711-1042 |
| Cow position: | chr14:24517645-24517314 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 251 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 63, 35 |
| Conread position: | 713-926 |
| Cow position: | chr14:9683612-9683824 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 60, 27 |
| Conread position: | 713-964 |
| Cow position: | chr14:36793088-36792834 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 36, 105 |
| Conread position: | 716-1025 |
| Cow position: | chr14:29933764-29933459 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 236 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 108, 61 |
| Conread position: | 720-1039 |
| Cow position: | chr14:25346784-25347098 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 54, 20 |
| Conread position: | 721-1028 |
| Cow position: | chr14:17989357-17989062 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 157 |
| Conread position: | 722-852 |
| Cow position: | chr14:48889344-48889214 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 101, 18 |
| Conread position: | 722-916 |
| Cow position: | chr14:1776096-1775901 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 52, 24 |
| Conread position: | 722-1039 |
| Cow position: | chr14:34375851-34375539 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 13 |
| Conread position: | 723-991 |
| Cow position: | chr14:17668678-17668409 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 155 |
| Conread position: | 735-1043 |
| Cow position: | chr14:37617598-37617898 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 224 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 39, 110 |
| Conread position: | 740-987 |
| Cow position: | chr14:33561689-33561936 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 186 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 34, 98 |
| Conread position: | 742-893 |
| Cow position: | chr14:47243078-47242932 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 18, 51 |
| Conread position: | 768-893 |
| Cow position: | chr14:20957721-20957845 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 6, 59 |
| Conread position: | 790-1012 |
| Cow position: | chr14:5439013-5439223 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 36, 57 |
| Conread position: | 792-1051 |
| Cow position: | chr14:46697059-46697315 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 34, 86 |
| Conread position: | 810-1019 |
| Cow position: | chr14:35154873-35155083 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 16, 7 |
| Conread position: | 840-995 |
| Cow position: | chr14:31481955-31481801 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 106, 37 |
| Conread position: | 843-975 |
| Cow position: | chr14:35086841-35086710 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 102, 34 |
| Conread position: | 1046-1359 |
| Cow position: | chr14:41956677-41956351 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 228 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 5, 46 |
| Conread position: | 1048-1360 |
| Cow position: | chr14:25315713-25316032 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 144, 61 |
| Conread position: | 1051-1274 |
| Cow position: | chr14:16519257-16519480 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 58, 39 |
| Conread position: | 1059-1200 |
| Cow position: | chr14:16838823-16838963 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 114, 103 |
| Conread position: | 1062-1280 |
| Cow position: | chr14:17450084-17449869 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 47, 40 |
Show alignments to all cow chromosomes.