Cow genome map


           Conread name:
           Ss1.1-rtra04_n22.5
        

               Conread position:
               705-1041
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 35
               

               Conread position:
               711-893
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               63, 29
               

               Conread position:
               711-893
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               67, 14
               

               Conread position:
               711-893
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               63, 29
               

               Conread position:
               711-893
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               63, 174
               

               Conread position:
               711-1042
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               251
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               63, 35
               

               Conread position:
               713-926
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               60, 27
               

               Conread position:
               713-964
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               36, 105
               

               Conread position:
               716-1025
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               236
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               108, 61
               

               Conread position:
               720-1039
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               54, 20
               

               Conread position:
               721-1028
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 157
               

               Conread position:
               722-852
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               100
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               101, 18
               

               Conread position:
               722-916
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               52, 24
               

               Conread position:
               722-1039
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 13
               

               Conread position:
               723-991
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 155
               

               Conread position:
               735-1043
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               224
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               39, 110
               

               Conread position:
               740-987
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               186
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               34, 98
               

               Conread position:
               742-893
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               18, 51
               

               Conread position:
               768-893
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               6, 59
               

               Conread position:
               790-1012
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               36, 57
               

               Conread position:
               792-1051
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               34, 86
               

               Conread position:
               810-1019
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               16, 7
               

               Conread position:
               840-995
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               106, 37
               

               Conread position:
               843-975
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               102, 34
               

               Conread position:
               1046-1359
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               228
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               5, 46
               

               Conread position:
               1048-1360
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               225
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               144, 61
               

               Conread position:
               1051-1274
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               58, 39
               

               Conread position:
               1059-1200
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               114, 103
               

               Conread position:
               1062-1280
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               47, 40
               
Show alignments to all cow chromosomes.