Cow genome map


           Conread name:
           Ss1.1-rtra04_n22.5
        

               Conread position:
               700-997
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               216
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               80, 11
               

               Conread position:
               711-924
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               67, 20
               

               Conread position:
               711-979
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 30
               

               Conread position:
               711-1019
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 171
               

               Conread position:
               711-1077
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               258
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               40, 84
               

               Conread position:
               712-1042
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 28
               

               Conread position:
               713-1012
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 166
               

               Conread position:
               713-1053
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               244
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               109, 38
               

               Conread position:
               716-874
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               58, 24
               

               Conread position:
               716-978
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               92, 57
               

               Conread position:
               719-975
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               196
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               26, 164
               

               Conread position:
               722-1107
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               284
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               56, 24
               

               Conread position:
               724-873
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               50, 21
               

               Conread position:
               728-920
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               46, 12
               

               Conread position:
               731-893
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               43, 9
               

               Conread position:
               746-1018
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               204
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               28, 132
               

               Conread position:
               746-1052
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               28, 135
               

               Conread position:
               747-930
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               27, 141
               

               Conread position:
               758-874
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               764-1027
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               10, 62
               

               Conread position:
               773-1026
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               191
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               72, 39
               

               Conread position:
               777-1049
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               6, 17
               

               Conread position:
               799-924
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               27, 78
               

               Conread position:
               825-1047
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               119, 51
               

               Conread position:
               831-924
               

               Cow position:
               
               

               Alignm length:
               94
               

               Alignm identity:
               80
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               884-1024
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               61, 43
               

               Conread position:
               886-1018
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               60, 42
               

               Conread position:
               1054-1364
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               69, 48
               
Show alignments to all cow chromosomes.