Cow genome map

Conread name: Ss1.1-rtra04_n22.5

Conread position: 697-893
Cow position: chr16:20861352-20861547 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 77, 67

Conread position: 706-1021
Cow position: chr16:14923576-14923279 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 233
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 72, 5

Conread position: 711-980
Cow position: chr16:43665555-43665284 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 198
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 63, 90

Conread position: 711-981
Cow position: chr16:53427021-53426752 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 208
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 63, 101

Conread position: 711-1012
Cow position: chr16:7317250-7316959 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 223
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 63, 29

Conread position: 712-948
Cow position: chr16:45413706-45413934 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 166
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 102, 38

Conread position: 720-925
Cow position: chr16:53518395-53518598 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 162
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 27, 90

Conread position: 722-893
Cow position: chr16:40137581-40137743 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 52, 18

Conread position: 723-978
Cow position: chr16:54725090-54724834 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 75

Conread position: 724-893
Cow position: chr16:30547286-30547448 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 23

Conread position: 727-893
Cow position: chr16:6047608-6047441 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 54, 148

Conread position: 739-893
Cow position: chr16:13356027-13356178 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 14, 89

Conread position: 740-869
Cow position: chr16:36211665-36211795 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 120

Conread position: 745-1044
Cow position: chr16:11784997-11785301 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 134

Conread position: 746-893
Cow position: chr16:53521486-53521337 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 28, 133

Conread position: 750-891
Cow position: chr16:27332449-27332308 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 28, 90

Conread position: 752-893
Cow position: chr16:5703509-5703367 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 117
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 23, 126

Conread position: 753-967
Cow position: chr16:26798559-26798346 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 168
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 21, 9

Conread position: 762-1042
Cow position: chr16:17019376-17019100 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 59

Conread position: 781-1058
Cow position: chr16:11367184-11367469 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 97

Conread position: 788-990
Cow position: chr16:14280998-14281201 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 160
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 39, 91

Conread position: 809-1052
Cow position: chr16:29988529-29988779 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 183
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 24, 8

Conread position: 819-967
Cow position: chr16:42644308-42644159 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 7, 59

Conread position: 843-1039
Cow position: chr16:40684087-40684287 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 102, 34

Conread position: 844-1027
Cow position: chr16:22722187-22722004 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 11, 33

Conread position: 855-1043
Cow position: chr16:51695911-51696102 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 124, 23

Conread position: 1040-1364
Cow position: chr16:10144445-10144110 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 223
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 102

Conread position: 1042-1264
Cow position: chr16:36237983-36238209 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 156
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 80, 128

Conread position: 1048-1254
Cow position: chr16:10456495-10456699 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 141
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 69, 146

Conread position: 1050-1341
Cow position: chr16:2203599-2203306 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 208
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 17, 78

Conread position: 1050-1362
Cow position: chr16:51380400-51380723 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 225
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 13, 100

Conread position: 1050-1363
Cow position: chr16:20849295-20848975 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 226
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 13, 80

Conread position: 1065-1235
Cow position: chr16:43794210-43794384 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 58, 84

Conread position: 1128-1365
Cow position: chr16:3344506-3344748 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 167
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 65, 57

Show alignments to all cow chromosomes.