Cow genome map


           Conread name:
           Ss1.1-rtra04_n22.5
        

               Conread position:
               703-893
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               71, 8
               

               Conread position:
               706-872
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               72, 34
               

               Conread position:
               711-875
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               33, 55
               

               Conread position:
               711-893
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               40, 110
               

               Conread position:
               711-897
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               67, 36
               

               Conread position:
               711-1016
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               229
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               25, 15
               

               Conread position:
               711-1057
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               243
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               63, 134
               

               Conread position:
               713-872
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               713-892
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               61, 36
               

               Conread position:
               713-1019
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               230
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               61, 27
               

               Conread position:
               713-1046
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               241
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               61, 37
               

               Conread position:
               722-868
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               52, 9
               

               Conread position:
               722-892
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               53, 80
               

               Conread position:
               722-1010
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 25
               

               Conread position:
               724-908
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               50, 154
               

               Conread position:
               729-1042
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               229
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               83, 151
               

               Conread position:
               741-973
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               33, 57
               

               Conread position:
               747-888
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               27, 131
               

               Conread position:
               753-893
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               25, 127
               

               Conread position:
               781-964
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               45, 97
               

               Conread position:
               797-975
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               92, 29
               

               Conread position:
               814-987
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               12, 64
               

               Conread position:
               825-980
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               120, 55
               

               Conread position:
               827-967
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               118, 50
               

               Conread position:
               852-1070
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               5, 43
               

               Conread position:
               862-1053
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               82, 65
               

               Conread position:
               1043-1235
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               149, 17
               

               Conread position:
               1047-1336
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               145, 15
               

               Conread position:
               1055-1364
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               13, 23
               

               Conread position:
               1057-1327
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               66, 8
               

               Conread position:
               1062-1364
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               46, 163
               
Show alignments to all cow chromosomes.