Cow genome map


           Conread name:
           Ss1.1-rtra04_n22.5
        

               Conread position:
               700-908
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               43, 11
               

               Conread position:
               705-1000
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 180
               

               Conread position:
               706-874
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               66, 7
               

               Conread position:
               709-899
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               8, 32
               

               Conread position:
               710-891
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               31, 121
               

               Conread position:
               711-893
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               63, 133
               

               Conread position:
               711-916
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               63, 167
               

               Conread position:
               711-1023
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               63, 29
               

               Conread position:
               711-1042
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 40
               

               Conread position:
               711-1044
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               237
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               63, 34
               

               Conread position:
               713-893
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               61, 27
               

               Conread position:
               713-974
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               197
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               232, 60
               

               Conread position:
               720-881
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               54, 94
               

               Conread position:
               722-914
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               52, 157
               

               Conread position:
               722-1030
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               52, 23
               

               Conread position:
               722-1043
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               52, 160
               

               Conread position:
               723-1036
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               22, 45
               

               Conread position:
               724-894
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               50, 61
               

               Conread position:
               727-897
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               47, 19
               

               Conread position:
               730-892
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               22, 145
               

               Conread position:
               740-893
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               34, 7
               

               Conread position:
               741-930
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               33, 79
               

               Conread position:
               741-978
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 137
               

               Conread position:
               741-1044
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               19, 23
               

               Conread position:
               751-1044
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               28, 12
               

               Conread position:
               784-924
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               42, 93
               

               Conread position:
               797-923
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               28, 80
               

               Conread position:
               797-1026
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               29, 80
               

               Conread position:
               801-1027
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               26, 76
               

               Conread position:
               805-1028
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               21, 33
               

               Conread position:
               822-1042
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               124, 54
               

               Conread position:
               833-966
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               110
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               110, 44
               

               Conread position:
               835-988
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               110, 41
               

               Conread position:
               845-983
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               99, 33
               

               Conread position:
               895-1044
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               50, 28
               

               Conread position:
               895-1063
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               134, 18
               

               Conread position:
               1044-1364
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               221
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               23, 106
               

               Conread position:
               1049-1368
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               214
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               17, 187
               

               Conread position:
               1050-1365
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               218
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               143, 37
               

               Conread position:
               1054-1263
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               12, 139
               

               Conread position:
               1054-1306
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               14, 58
               

               Conread position:
               1055-1334
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               114, 10
               

               Conread position:
               1062-1205
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               1065-1353
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               202
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               126, 54
               

               Conread position:
               1119-1359
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               140, 74
               
Show alignments to all cow chromosomes.