Cow genome map
| Conread name: | Ss1.1-rtra04_n22.5 |
| Conread position: | 700-873 |
| Cow position: | chr20:11016077-11015903 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 74, 50 |
| Conread position: | 703-893 |
| Cow position: | chr20:6819918-6819726 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 75, 8 |
| Conread position: | 703-908 |
| Cow position: | chr20:18217604-18217816 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 75, 10 |
| Conread position: | 703-981 |
| Cow position: | chr20:26252196-26251918 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 71, 11 |
| Conread position: | 711-889 |
| Cow position: | chr20:9174954-9174779 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 63, 24 |
| Conread position: | 711-893 |
| Cow position: | chr20:5917836-5917653 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 63, 10 |
| Conread position: | 713-1022 |
| Cow position: | chr20:12580004-12579692 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 104 |
| Conread position: | 716-893 |
| Cow position: | chr20:18120353-18120186 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 35, 11 |
| Conread position: | 721-971 |
| Cow position: | chr20:3004923-3005172 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 39 |
| Conread position: | 721-1034 |
| Cow position: | chr20:1237061-1236744 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 25 |
| Conread position: | 724-887 |
| Cow position: | chr20:28486899-28487062 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 48, 16 |
| Conread position: | 725-1018 |
| Cow position: | chr20:1514325-1514624 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 64 |
| Conread position: | 727-871 |
| Cow position: | chr20:6337570-6337712 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 51, 8 |
| Conread position: | 732-891 |
| Cow position: | chr20:25538885-25538725 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 7, 34 |
| Conread position: | 740-975 |
| Cow position: | chr20:1880719-1880483 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 180 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 38, 79 |
| Conread position: | 748-908 |
| Cow position: | chr20:38126576-38126737 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 26, 130 |
| Conread position: | 762-941 |
| Cow position: | chr20:36894723-36894533 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 13, 176 |
| Conread position: | 765-974 |
| Cow position: | chr20:16273754-16273555 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 9, 61 |
| Conread position: | 809-1039 |
| Cow position: | chr20:36785447-36785681 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 18, 51 |
| Conread position: | 822-975 |
| Cow position: | chr20:40107997-40107843 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 105, 56 |
| Conread position: | 851-1057 |
| Cow position: | chr20:34987090-34986881 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 117, 26 |
| Conread position: | 854-1044 |
| Cow position: | chr20:32446775-32446585 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 92, 23 |
| Conread position: | 1042-1364 |
| Cow position: | chr20:26283754-26283422 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 54, 201 |
| Conread position: | 1047-1350 |
| Cow position: | chr20:16850808-16850506 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 10, 102 |
| Conread position: | 1048-1309 |
| Cow position: | chr20:12544866-12545126 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 21, 162 |
| Conread position: | 1054-1348 |
| Cow position: | chr20:289677-289965 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 9, 93 |
| Conread position: | 1055-1274 |
| Cow position: | chr20:4761777-4762000 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 63, 0 |
Show alignments to all cow chromosomes.