Cow genome map
| Conread name: | Ss1.1-rtra04_n22.5 |
| Conread position: | 703-1027 |
| Cow position: | chr21:13313124-13312807 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 221 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 71, 8 |
| Conread position: | 711-893 |
| Cow position: | chr21:39855903-39855726 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 63, 29 |
| Conread position: | 711-978 |
| Cow position: | chr21:34775078-34774811 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 199 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 64, 29 |
| Conread position: | 711-1023 |
| Cow position: | chr21:20561796-20562112 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 169 |
| Conread position: | 711-1026 |
| Cow position: | chr21:37105893-37106201 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 235 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 22, 26 |
| Conread position: | 713-966 |
| Cow position: | chr21:13038735-13038482 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 61, 34 |
| Conread position: | 713-975 |
| Cow position: | chr21:21637609-21637876 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 41, 170 |
| Conread position: | 722-1042 |
| Cow position: | chr21:4890397-4890071 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 229 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 52, 16 |
| Conread position: | 722-1052 |
| Cow position: | chr21:27663183-27662853 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 245 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 52, 156 |
| Conread position: | 724-989 |
| Cow position: | chr21:21688944-21688677 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 75 |
| Conread position: | 724-1031 |
| Cow position: | chr21:38700990-38701308 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 54, 23 |
| Conread position: | 730-893 |
| Cow position: | chr21:4167819-4167655 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 44, 10 |
| Conread position: | 752-893 |
| Cow position: | chr21:28608121-28608268 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 8, 128 |
| Conread position: | 771-888 |
| Cow position: | chr21:26469148-26469265 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 55, 106 |
| Conread position: | 797-1046 |
| Cow position: | chr21:15229184-15229442 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 196 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 10, 83 |
| Conread position: | 801-1015 |
| Cow position: | chr21:19373031-19373249 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 13, 77 |
| Conread position: | 808-978 |
| Cow position: | chr21:3058826-3058995 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 825-1044 |
| Cow position: | chr21:18372948-18372727 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 120, 52 |
| Conread position: | 836-978 |
| Cow position: | chr21:4120260-4120397 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 1031-1359 |
| Cow position: | chr21:4048057-4047711 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 234 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 92, 34 |
| Conread position: | 1041-1249 |
| Cow position: | chr21:39921150-39920939 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 82, 167 |
| Conread position: | 1043-1368 |
| Cow position: | chr21:28400876-28401218 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 242 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 57, 97 |
| Conread position: | 1050-1364 |
| Cow position: | chr21:32453439-32453765 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 62, 0 |
Show alignments to all cow chromosomes.