Cow genome map
| Conread name: | Ss1.1-rtra04_n22.5 |
| Conread position: | 553-697 |
| Cow position: | chr22:35571250-35571103 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 116, 60 |
| Conread position: | 711-891 |
| Cow position: | chr22:12027843-12028027 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 63, 29 |
| Conread position: | 711-1042 |
| Cow position: | chr22:12453842-12453502 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 95 |
| Conread position: | 713-898 |
| Cow position: | chr22:11605098-11604910 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 113, 32 |
| Conread position: | 716-908 |
| Cow position: | chr22:1253197-1253007 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 58, 28 |
| Conread position: | 720-893 |
| Cow position: | chr22:45522479-45522655 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 20, 28 |
| Conread position: | 721-1042 |
| Cow position: | chr22:26897593-26897922 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 161 |
| Conread position: | 722-894 |
| Cow position: | chr22:6052180-6052007 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 57, 156 |
| Conread position: | 722-960 |
| Cow position: | chr22:22752832-22752595 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 183 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 22, 115 |
| Conread position: | 722-974 |
| Cow position: | chr22:3427464-3427721 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 53, 28 |
| Conread position: | 722-975 |
| Cow position: | chr22:14231547-14231296 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 23, 77 |
| Conread position: | 723-889 |
| Cow position: | chr22:28807093-28806927 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 51, 17 |
| Conread position: | 727-893 |
| Cow position: | chr22:7964935-7964763 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 47, 156 |
| Conread position: | 739-1039 |
| Cow position: | chr22:43095303-43094999 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 78 |
| Conread position: | 743-891 |
| Cow position: | chr22:20651031-20650882 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 31, 135 |
| Conread position: | 759-924 |
| Cow position: | chr22:18933807-18933971 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 67, 38 |
| Conread position: | 762-925 |
| Cow position: | chr22:47520540-47520377 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 12, 116 |
| Conread position: | 797-1027 |
| Cow position: | chr22:32171066-32170833 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 29, 80 |
| Conread position: | 823-1044 |
| Cow position: | chr22:40375568-40375350 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 7, 59 |
| Conread position: | 825-1042 |
| Cow position: | chr22:44506026-44505820 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 204, 50 |
| Conread position: | 830-1050 |
| Cow position: | chr22:9219442-9219219 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 115, 40 |
| Conread position: | 836-967 |
| Cow position: | chr22:43821180-43821311 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 83, 41 |
| Conread position: | 848-1000 |
| Cow position: | chr22:31159222-31159072 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 98, 29 |
| Conread position: | 862-975 |
| Cow position: | chr22:18933942-18934055 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 96 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 83, 16 |
| Conread position: | 862-1026 |
| Cow position: | chr22:15099507-15099349 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 83, 15 |
| Conread position: | 863-1048 |
| Cow position: | chr22:24674925-24675120 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 35, 14 |
| Conread position: | 865-1031 |
| Cow position: | chr22:11197362-11197533 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 80, 12 |
| Conread position: | 1032-1360 |
| Cow position: | chr22:25841178-25841494 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 35, 15 |
| Conread position: | 1040-1351 |
| Cow position: | chr22:7307301-7306981 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 16, 227 |
| Conread position: | 1046-1286 |
| Cow position: | chr22:26452481-26452718 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 81, 149 |
| Conread position: | 1048-1357 |
| Cow position: | chr22:29883898-29884200 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 215 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 145, 73 |
| Conread position: | 1049-1364 |
| Cow position: | chr22:31351835-31352153 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 230 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 18, 118 |
| Conread position: | 1054-1358 |
| Cow position: | chr22:8737628-8737926 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 215 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 13, 197 |
| Conread position: | 1054-1364 |
| Cow position: | chr22:34100292-34100607 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 232 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 9, 85 |
Show alignments to all cow chromosomes.