Cow genome map


           Conread name:
           Ss1.1-rtra04_n22.5
        

               Conread position:
               706-1054
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 5
               

               Conread position:
               711-987
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 15
               

               Conread position:
               711-995
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 29
               

               Conread position:
               711-1029
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 171
               

               Conread position:
               712-897
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               64, 28
               

               Conread position:
               713-892
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               112, 27
               

               Conread position:
               713-1019
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 32
               

               Conread position:
               716-978
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               191
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               58, 24
               

               Conread position:
               716-1045
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               60, 24
               

               Conread position:
               721-875
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               721-893
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               55, 26
               

               Conread position:
               722-978
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               194
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               104, 18
               

               Conread position:
               722-978
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               196
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               20, 76
               

               Conread position:
               722-1026
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 160
               

               Conread position:
               723-893
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               51, 24
               

               Conread position:
               724-1027
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 66
               

               Conread position:
               728-888
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               46, 90
               

               Conread position:
               750-893
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               26, 16
               

               Conread position:
               750-1042
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               76, 15
               

               Conread position:
               762-1026
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               193
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               12, 51
               

               Conread position:
               773-1049
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               208
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               53, 104
               

               Conread position:
               792-980
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               155
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               35, 86
               

               Conread position:
               837-979
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               108, 40
               

               Conread position:
               839-1043
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               106, 38
               

               Conread position:
               851-973
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               93, 26
               

               Conread position:
               865-1042
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               84, 12
               

               Conread position:
               886-1074
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               59, 41
               

               Conread position:
               1046-1364
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               82, 152
               

               Conread position:
               1150-1365
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               42, 20
               
Show alignments to all cow chromosomes.