Cow genome map
| Conread name: | Ss1.1-rtra04_n22.5 |
| Conread position: | 706-1054 |
| Cow position: | chr23:9562885-9563235 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 5 |
| Conread position: | 711-987 |
| Cow position: | chr23:22280704-22280410 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 15 |
| Conread position: | 711-995 |
| Cow position: | chr23:20914402-20914123 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 29 |
| Conread position: | 711-1029 |
| Cow position: | chr23:27340368-27340692 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 171 |
| Conread position: | 712-897 |
| Cow position: | chr23:34331144-34331331 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 64, 28 |
| Conread position: | 713-892 |
| Cow position: | chr23:24570075-24569897 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 112, 27 |
| Conread position: | 713-1019 |
| Cow position: | chr23:40918341-40918644 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 32 |
| Conread position: | 716-978 |
| Cow position: | chr23:27132157-27132416 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 191 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 58, 24 |
| Conread position: | 716-1045 |
| Cow position: | chr23:39470426-39470747 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 60, 24 |
| Conread position: | 721-875 |
| Cow position: | chr23:33491014-33491169 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 721-893 |
| Cow position: | chr23:29610227-29610394 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 55, 26 |
| Conread position: | 722-978 |
| Cow position: | chr23:14853381-14853630 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 194 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 104, 18 |
| Conread position: | 722-978 |
| Cow position: | chr23:26660033-26659774 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 196 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 20, 76 |
| Conread position: | 722-1026 |
| Cow position: | chr23:36434725-36434431 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 160 |
| Conread position: | 723-893 |
| Cow position: | chr23:29753697-29753529 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 51, 24 |
| Conread position: | 724-1027 |
| Cow position: | chr23:20091873-20091578 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 66 |
| Conread position: | 728-888 |
| Cow position: | chr23:2396490-2396650 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 46, 90 |
| Conread position: | 750-893 |
| Cow position: | chr23:25981164-25981306 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 26, 16 |
| Conread position: | 750-1042 |
| Cow position: | chr23:24007998-24007715 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 76, 15 |
| Conread position: | 762-1026 |
| Cow position: | chr23:22613203-22612935 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 193 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 12, 51 |
| Conread position: | 773-1049 |
| Cow position: | chr23:4547609-4547340 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 208 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 53, 104 |
| Conread position: | 792-980 |
| Cow position: | chr23:37437423-37437611 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 155 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 35, 86 |
| Conread position: | 837-979 |
| Cow position: | chr23:9626642-9626786 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 108, 40 |
| Conread position: | 839-1043 |
| Cow position: | chr23:14865501-14865291 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 106, 38 |
| Conread position: | 851-973 |
| Cow position: | chr23:9065523-9065401 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 93, 26 |
| Conread position: | 865-1042 |
| Cow position: | chr23:28967372-28967196 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 84, 12 |
| Conread position: | 886-1074 |
| Cow position: | chr23:27002413-27002232 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 59, 41 |
| Conread position: | 1046-1364 |
| Cow position: | chr23:31645964-31646282 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 82, 152 |
| Conread position: | 1150-1365 |
| Cow position: | chr23:26350482-26350274 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 42, 20 |
Show alignments to all cow chromosomes.