Cow genome map
| Conread name: | Ss1.1-rtra04_n22.5 |
| Conread position: | 703-893 |
| Cow position: | chr24:32951061-32951249 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 75, 8 |
| Conread position: | 711-890 |
| Cow position: | chr24:29790646-29790467 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 63, 29 |
| Conread position: | 711-978 |
| Cow position: | chr24:28773851-28773588 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 52 |
| Conread position: | 713-887 |
| Cow position: | chr24:28981725-28981551 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 61, 27 |
| Conread position: | 720-980 |
| Cow position: | chr24:30201349-30201100 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 197 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 106, 20 |
| Conread position: | 720-990 |
| Cow position: | chr24:36527553-36527842 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 166 |
| Conread position: | 722-975 |
| Cow position: | chr24:12005634-12005381 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 56, 156 |
| Conread position: | 725-893 |
| Cow position: | chr24:42684861-42684693 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 53, 22 |
| Conread position: | 726-1020 |
| Cow position: | chr24:43914409-43914706 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 48, 12 |
| Conread position: | 742-875 |
| Cow position: | chr24:45077207-45077343 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 750-922 |
| Cow position: | chr24:42702131-42701958 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 28, 129 |
| Conread position: | 767-1044 |
| Cow position: | chr24:10290076-10289799 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 7, 60 |
| Conread position: | 771-900 |
| Cow position: | chr24:30815819-30815948 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 55, 106 |
| Conread position: | 795-892 |
| Cow position: | chr24:39029843-39029940 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 84 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 31, 82 |
| Conread position: | 811-981 |
| Cow position: | chr24:27868613-27868452 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 164, 14 |
| Conread position: | 836-984 |
| Cow position: | chr24:9145744-9145594 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 60, 42 |
| Conread position: | 1048-1364 |
| Cow position: | chr24:16858601-16858277 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 25, 117 |
| Conread position: | 1051-1358 |
| Cow position: | chr24:2447677-2447983 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 209 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 16, 26 |
| Conread position: | 1109-1338 |
| Cow position: | chr24:37281266-37281492 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 82, 144 |
Show alignments to all cow chromosomes.