Cow genome map


           Conread name:
           Ss1.1-rtra04_n22.5
        

               Conread position:
               711-890
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               63, 29
               

               Conread position:
               713-924
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               172
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               36, 172
               

               Conread position:
               713-969
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               65, 25
               

               Conread position:
               713-1031
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               65, 27
               

               Conread position:
               714-893
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               133
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               18, 52
               

               Conread position:
               716-976
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 24
               

               Conread position:
               721-921
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               167
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 25
               

               Conread position:
               721-1048
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 25
               

               Conread position:
               723-892
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               51, 16
               

               Conread position:
               730-892
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               44, 10
               

               Conread position:
               730-1043
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               44, 139
               

               Conread position:
               746-893
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               28, 132
               

               Conread position:
               750-893
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               48, 26
               

               Conread position:
               763-893
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               11, 109
               

               Conread position:
               774-1043
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 105
               

               Conread position:
               809-990
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               16, 69
               

               Conread position:
               861-969
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               862-972
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               93
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               83, 15
               

               Conread position:
               1047-1357
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               21, 228
               

               Conread position:
               1049-1360
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               18, 115
               

               Conread position:
               1049-1364
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               19, 42
               

               Conread position:
               1050-1364
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               220
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               25, 279
               
Show alignments to all cow chromosomes.