Cow genome map


           Conread name:
           Ss1.1-rtra04_n22.5
        

               Conread position:
               2-326
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 63
               

               Conread position:
               339-1026
               

               Cow position:
               
               

               Alignm length:
               696
               

               Alignm identity:
               533
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 54
               

               Conread position:
               711-891
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               55, 22
               

               Conread position:
               716-1041
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               237
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               58, 30
               

               Conread position:
               718-1065
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               24, 52
               

               Conread position:
               720-859
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               54, 94
               

               Conread position:
               720-992
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               201
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               102, 20
               

               Conread position:
               722-863
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               52, 18
               

               Conread position:
               722-875
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               722-891
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               44, 18
               

               Conread position:
               722-908
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               52, 18
               

               Conread position:
               722-975
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               56, 18
               

               Conread position:
               722-1026
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               231
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               52, 18
               

               Conread position:
               723-872
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               51, 17
               

               Conread position:
               723-890
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               51, 156
               

               Conread position:
               724-861
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               725-888
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               101, 55
               

               Conread position:
               728-1039
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               50, 17
               

               Conread position:
               739-919
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               35, 75
               

               Conread position:
               739-1029
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               35, 56
               

               Conread position:
               740-893
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               34, 53
               

               Conread position:
               745-966
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               29, 133
               

               Conread position:
               747-893
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               29, 131
               

               Conread position:
               747-1035
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               27, 46
               

               Conread position:
               750-891
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               24, 128
               

               Conread position:
               794-969
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               151, 31
               

               Conread position:
               1038-1368
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               1048-1342
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               17, 53
               

               Conread position:
               1048-1364
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               28, 117
               

               Conread position:
               1049-1265
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               17, 164
               

               Conread position:
               1067-1364
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               126, 21
               
Show alignments to all cow chromosomes.