Cow genome map


           Conread name:
           Ss1.1-rtra04_n22.5
        

               Conread position:
               711-892
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               63, 167
               

               Conread position:
               711-1044
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 36
               

               Conread position:
               712-893
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               39, 167
               

               Conread position:
               713-892
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               61, 26
               

               Conread position:
               716-978
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 98
               

               Conread position:
               719-978
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               202
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               55, 21
               

               Conread position:
               723-879
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               729-883
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               45, 69
               

               Conread position:
               740-893
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               34, 138
               

               Conread position:
               750-975
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               28, 128
               

               Conread position:
               764-1000
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               180
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               31, 118
               

               Conread position:
               769-908
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               5, 113
               

               Conread position:
               779-972
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               781-908
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               45, 19
               

               Conread position:
               817-1043
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               9, 62
               

               Conread position:
               818-1027
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               127, 7
               

               Conread position:
               844-988
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               101, 33
               

               Conread position:
               1043-1364
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               80, 182
               

               Conread position:
               1047-1364
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               220
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               52, 18
               

               Conread position:
               1051-1364
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               217
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               57, 16
               

               Conread position:
               1056-1365
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               137, 204
               

               Conread position:
               1113-1358
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               102, 24
               

               Conread position:
               1128-1311
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               65, 108
               
Show alignments to all cow chromosomes.