Cow genome map
| Conread name: | Ss1.1-rtra04_n22.5 |
| Conread position: | 711-892 |
| Cow position: | chr28:5609397-5609215 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 63, 167 |
| Conread position: | 711-1044 |
| Cow position: | chr28:28348146-28347807 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 36 |
| Conread position: | 712-893 |
| Cow position: | chr28:22712400-22712217 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 39, 167 |
| Conread position: | 713-892 |
| Cow position: | chr28:34299175-34299347 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 61, 26 |
| Conread position: | 716-978 |
| Cow position: | chr28:1905840-1906094 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 98 |
| Conread position: | 719-978 |
| Cow position: | chr28:13056879-13056613 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 202 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 55, 21 |
| Conread position: | 723-879 |
| Cow position: | chr28:22472051-22472209 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 729-883 |
| Cow position: | chr28:27559473-27559627 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 45, 69 |
| Conread position: | 740-893 |
| Cow position: | chr28:16905717-16905563 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 34, 138 |
| Conread position: | 750-975 |
| Cow position: | chr28:1550884-1551099 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 28, 128 |
| Conread position: | 764-1000 |
| Cow position: | chr28:20721315-20721076 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 180 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 31, 118 |
| Conread position: | 769-908 |
| Cow position: | chr28:26628877-26629017 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 5, 113 |
| Conread position: | 779-972 |
| Cow position: | chr28:14472456-14472643 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 781-908 |
| Cow position: | chr28:10968267-10968392 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 45, 19 |
| Conread position: | 817-1043 |
| Cow position: | chr28:7801571-7801787 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 9, 62 |
| Conread position: | 818-1027 |
| Cow position: | chr28:3722623-3722422 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 127, 7 |
| Conread position: | 844-988 |
| Cow position: | chr28:30615225-30615082 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 101, 33 |
| Conread position: | 1043-1364 |
| Cow position: | chr28:24543040-24542712 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 80, 182 |
| Conread position: | 1047-1364 |
| Cow position: | chr28:3845998-3845679 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 52, 18 |
| Conread position: | 1051-1364 |
| Cow position: | chr28:33956078-33956388 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 217 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 57, 16 |
| Conread position: | 1056-1365 |
| Cow position: | chr28:34358701-34358387 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 137, 204 |
| Conread position: | 1113-1358 |
| Cow position: | chr28:15254850-15255103 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 102, 24 |
| Conread position: | 1128-1311 |
| Cow position: | chr28:22823631-22823444 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 65, 108 |
Show alignments to all cow chromosomes.