Cow genome map


           Conread name:
           Ss1.1-rtra04_n22.5
        

               Conread position:
               700-1019
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               235
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               46, 11
               

               Conread position:
               711-872
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               63, 54
               

               Conread position:
               711-890
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               63, 40
               

               Conread position:
               711-908
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               81, 29
               

               Conread position:
               711-915
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               63, 29
               

               Conread position:
               711-974
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               67, 29
               

               Conread position:
               713-871
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               61, 25
               

               Conread position:
               713-987
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 165
               

               Conread position:
               722-891
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               50, 63
               

               Conread position:
               722-893
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               52, 18
               

               Conread position:
               722-893
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               52, 29
               

               Conread position:
               722-898
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               42, 23
               

               Conread position:
               722-908
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               56, 25
               

               Conread position:
               723-893
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               55, 16
               

               Conread position:
               724-893
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               50, 16
               

               Conread position:
               725-1026
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               229
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               49, 219
               

               Conread position:
               735-980
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               16, 77
               

               Conread position:
               741-1039
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               229
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               85, 146
               

               Conread position:
               753-1004
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               195
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               71, 26
               

               Conread position:
               758-893
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               22, 30
               

               Conread position:
               805-975
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               21, 74
               

               Conread position:
               805-979
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               21, 10
               

               Conread position:
               873-1044
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               57, 66
               

               Conread position:
               891-1043
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               54, 40
               

               Conread position:
               1066-1356
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               103, 22
               

               Conread position:
               1067-1334
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               59, 117
               
Show alignments to all cow chromosomes.