Cow genome map

Conread name: Ss1.1-rtra04_n22.5

Conread position: 694-1042
Cow position:
Alignm length: 369
Alignm identity: 247
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 60, 17

Conread position: 703-893
Cow position:
Alignm length: 193
Alignm identity: 143
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 71, 8

Conread position: 711-908
Cow position:
Alignm length: 200
Alignm identity: 157
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 63, 15

Conread position: 714-898
Cow position:
Alignm length: 189
Alignm identity: 146
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 5, 28

Conread position: 716-868
Cow position:
Alignm length: 155
Alignm identity: 115
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 58, 46

Conread position: 717-888
Cow position:
Alignm length: 174
Alignm identity: 136
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 57, 23

Conread position: 720-893
Cow position:
Alignm length: 176
Alignm identity: 133
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 54, 27

Conread position: 720-922
Cow position:
Alignm length: 209
Alignm identity: 150
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 56, 20

Conread position: 720-1052
Cow position:
Alignm length: 343
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 159

Conread position: 721-893
Cow position:
Alignm length: 175
Alignm identity: 136
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 51, 122

Conread position: 722-1026
Cow position:
Alignm length: 309
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 22

Conread position: 722-1027
Cow position:
Alignm length: 317
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 58

Conread position: 723-893
Cow position:
Alignm length: 173
Alignm identity: 125
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 55, 155

Conread position: 723-894
Cow position:
Alignm length: 173
Alignm identity: 139
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 104, 24

Conread position: 727-895
Cow position:
Alignm length: 172
Alignm identity: 125
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 47, 71

Conread position: 728-892
Cow position:
Alignm length: 167
Alignm identity: 123
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 46, 19

Conread position: 739-891
Cow position:
Alignm length: 155
Alignm identity: 118
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 35, 139

Conread position: 747-893
Cow position:
Alignm length: 149
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 18

Conread position: 750-888
Cow position:
Alignm length: 141
Alignm identity: 113
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 25, 35

Conread position: 750-891
Cow position:
Alignm length: 144
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 66

Conread position: 750-892
Cow position:
Alignm length: 145
Alignm identity: 111
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 24, 12

Conread position: 750-908
Cow position:
Alignm length: 166
Alignm identity: 123
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 750-1039
Cow position:
Alignm length: 297
Alignm identity: 214
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 195, 127

Conread position: 752-893
Cow position:
Alignm length: 144
Alignm identity: 114
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 28, 11

Conread position: 771-973
Cow position:
Alignm length: 206
Alignm identity: 152
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 55, 106

Conread position: 774-893
Cow position:
Alignm length: 120
Alignm identity: 99
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 777-875
Cow position:
Alignm length: 100
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 27

Conread position: 781-1036
Cow position:
Alignm length: 265
Alignm identity: 194
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 46, 36

Conread position: 784-973
Cow position:
Alignm length: 191
Alignm identity: 137
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 42, 93

Conread position: 804-1042
Cow position:
Alignm length: 249
Alignm identity: 181
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 22, 82

Conread position: 810-1057
Cow position:
Alignm length: 255
Alignm identity: 189
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 16, 63

Conread position: 815-973
Cow position:
Alignm length: 164
Alignm identity: 128
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 11, 39

Conread position: 844-982
Cow position:
Alignm length: 140
Alignm identity: 116
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 101, 32

Conread position: 862-1017
Cow position:
Alignm length: 160
Alignm identity: 125
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 83, 15

Conread position: 895-1070
Cow position:
Alignm length: 179
Alignm identity: 132
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 50, 33

Conread position: 1040-1273
Cow position:
Alignm length: 239
Alignm identity: 160
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 12, 33

Conread position: 1044-1205
Cow position:
Alignm length: 167
Alignm identity: 123
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 1048-1364
Cow position:
Alignm length: 333
Alignm identity: 224
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 20, 0

Conread position: 1048-1364
Cow position:
Alignm length: 334
Alignm identity: 230
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 13, 98

Conread position: 1049-1364
Cow position:
Alignm length: 322
Alignm identity: 220
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 19, 102

Conread position: 1054-1361
Cow position:
Alignm length: 315
Alignm identity: 201
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 15, 232

Conread position: 1056-1300
Cow position:
Alignm length: 253
Alignm identity: 177
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 14, 158

Conread position: 1056-1368
Cow position:
Alignm length: 320
Alignm identity: 224
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 135, 9

Conread position: 1067-1229
Cow position:
Alignm length: 168
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 41, 86

Conread position: 1072-1364
Cow position:
Alignm length: 297
Alignm identity: 209
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 119, 72

Conread position: 1122-1364
Cow position:
Alignm length: 252
Alignm identity: 175
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 71, 59

Conread position: 1139-1364
Cow position:
Alignm length: 233
Alignm identity: 159
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 54, 7

Show alignments to all cow chromosomes.