Cow genome map


           Conread name:
           Ss1.1-rtra04_n22.5
        

               Conread position:
               681-881
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               32, 23
               

               Conread position:
               711-859
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               711-893
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               63, 35
               

               Conread position:
               711-897
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               63, 39
               

               Conread position:
               711-944
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               63, 39
               

               Conread position:
               711-975
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               43, 35
               

               Conread position:
               711-1042
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               246
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               10, 40
               

               Conread position:
               713-893
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               61, 165
               

               Conread position:
               713-893
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               31, 167
               

               Conread position:
               713-896
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               61, 27
               

               Conread position:
               713-908
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               54, 127
               

               Conread position:
               716-893
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               56, 132
               

               Conread position:
               716-975
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 166
               

               Conread position:
               720-892
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               16, 21
               

               Conread position:
               721-861
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               38, 19
               

               Conread position:
               721-974
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               38, 13
               

               Conread position:
               722-907
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               52, 165
               

               Conread position:
               722-1042
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 160
               

               Conread position:
               725-1057
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 66
               

               Conread position:
               729-892
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               45, 16
               

               Conread position:
               737-1018
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 143
               

               Conread position:
               739-975
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               35, 143
               

               Conread position:
               743-908
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               128
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               23, 142
               

               Conread position:
               750-905
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               24, 128
               

               Conread position:
               752-919
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               22, 128
               

               Conread position:
               763-1045
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               11, 26
               

               Conread position:
               804-1017
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               22, 59
               

               Conread position:
               826-1057
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               119, 50
               

               Conread position:
               851-1029
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               94, 28
               

               Conread position:
               859-1027
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               50, 18
               

               Conread position:
               1039-1346
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               130, 18
               

               Conread position:
               1043-1359
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               25, 218
               

               Conread position:
               1047-1190
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1047-1354
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               217
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               146, 34
               

               Conread position:
               1047-1368
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               216
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               146, 15
               

               Conread position:
               1050-1218
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               17, 166
               
Show alignments to all cow chromosomes.