Cow genome map
| Conread name: | Ss1.1-rtra04_n22.5 |
| Conread position: | 706-1058 |
| Cow position: | chr7:43944458-43944098 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 173 |
| Conread position: | 711-875 |
| Cow position: | chr7:2393580-2393747 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 711-892 |
| Cow position: | chr7:45196726-45196906 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 73, 161 |
| Conread position: | 711-897 |
| Cow position: | chr7:26168116-26168302 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 63, 29 |
| Conread position: | 711-979 |
| Cow position: | chr7:32380252-32379994 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 63, 29 |
| Conread position: | 711-1042 |
| Cow position: | chr7:29463939-29464288 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 20, 32 |
| Conread position: | 713-861 |
| Cow position: | chr7:1257155-1257303 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 14, 28 |
| Conread position: | 713-1043 |
| Cow position: | chr7:45227875-45227531 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 22 |
| Conread position: | 716-893 |
| Cow position: | chr7:1015807-1015628 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 722-893 |
| Cow position: | chr7:718990-718819 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 52, 85 |
| Conread position: | 722-893 |
| Cow position: | chr7:35762123-35762293 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 56, 18 |
| Conread position: | 722-908 |
| Cow position: | chr7:24109622-24109808 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 52, 18 |
| Conread position: | 723-1027 |
| Cow position: | chr7:33380850-33381161 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 17 |
| Conread position: | 743-1039 |
| Cow position: | chr7:62593357-62593057 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 220 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 57, 49 |
| Conread position: | 751-900 |
| Cow position: | chr7:29480969-29480819 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 10, 127 |
| Conread position: | 754-893 |
| Cow position: | chr7:30401286-30401426 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 20, 124 |
| Conread position: | 763-891 |
| Cow position: | chr7:22006082-22006210 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 12, 115 |
| Conread position: | 764-893 |
| Cow position: | chr7:49716640-49716511 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 10, 68 |
| Conread position: | 825-974 |
| Cow position: | chr7:47673816-47673662 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 87, 51 |
| Conread position: | 1029-1364 |
| Cow position: | chr7:61082094-61082421 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 212 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 114, 13 |
| Conread position: | 1043-1348 |
| Cow position: | chr7:20060615-20060317 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 24, 67 |
| Conread position: | 1049-1259 |
| Cow position: | chr7:41982387-41982601 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 8, 97 |
| Conread position: | 1051-1282 |
| Cow position: | chr7:13497368-13497600 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 72, 99 |
| Conread position: | 1056-1350 |
| Cow position: | chr7:30989896-30990199 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 218 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 11, 94 |
| Conread position: | 1056-1350 |
| Cow position: | chr7:31009859-31010162 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 218 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 11, 94 |
Show alignments to all cow chromosomes.