Cow genome map


           Conread name:
           Ss1.1-rtra04_n22.5
        

               Conread position:
               694-861
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               8, 134
               

               Conread position:
               696-873
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               12, 63
               

               Conread position:
               699-990
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               94, 11
               

               Conread position:
               706-1026
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               232
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               66, 34
               

               Conread position:
               710-933
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               68, 30
               

               Conread position:
               711-872
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               116, 29
               

               Conread position:
               711-892
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               63, 39
               

               Conread position:
               711-897
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               65, 36
               

               Conread position:
               711-1017
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               227
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               63, 145
               

               Conread position:
               711-1039
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               237
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               9, 30
               

               Conread position:
               712-900
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               61, 165
               

               Conread position:
               713-873
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               713-893
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               113, 55
               

               Conread position:
               716-891
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               58, 24
               

               Conread position:
               716-892
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               716-965
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               34, 164
               

               Conread position:
               719-891
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               23, 137
               

               Conread position:
               721-893
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               53, 24
               

               Conread position:
               721-974
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 25
               

               Conread position:
               722-893
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               52, 18
               

               Conread position:
               723-893
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               52, 24
               

               Conread position:
               723-908
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               21, 158
               

               Conread position:
               724-1054
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 16
               

               Conread position:
               725-982
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               193
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               43, 75
               

               Conread position:
               727-973
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               47, 13
               

               Conread position:
               727-1049
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 11
               

               Conread position:
               728-891
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               50, 12
               

               Conread position:
               728-978
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               46, 12
               

               Conread position:
               740-984
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 115
               

               Conread position:
               740-1039
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               222
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               34, 72
               

               Conread position:
               750-893
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               24, 128
               

               Conread position:
               750-975
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               24, 48
               

               Conread position:
               750-981
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               26, 103
               

               Conread position:
               750-1019
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               199
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               24, 55
               

               Conread position:
               754-888
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               24, 119
               

               Conread position:
               762-988
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               12, 88
               

               Conread position:
               768-1057
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               222
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               6, 102
               

               Conread position:
               780-1027
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               46, 97
               

               Conread position:
               806-1026
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               20, 71
               

               Conread position:
               808-990
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               18, 69
               

               Conread position:
               827-1042
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               103, 19
               

               Conread position:
               842-1051
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               102, 35
               

               Conread position:
               851-1043
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               82, 27
               

               Conread position:
               856-1039
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               101, 21
               

               Conread position:
               864-1088
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               13, 66
               

               Conread position:
               876-1044
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               66, 52
               

               Conread position:
               1048-1365
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               76, 40
               

               Conread position:
               1119-1356
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               13, 156
               

               Conread position:
               1124-1364
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               69, 55
               
Show alignments to all cow chromosomes.