Cow genome map


           Conread name:
           Ss1.1-rtra06_c17.5
        

               Conread position:
               210-564
               

               Cow position:
               chr12:546546-546927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               254
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               113, 23
               

               Conread position:
               221-542
               

               Cow position:
               chr12:31893445-31893114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               229
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               102, 35
               

               Conread position:
               223-549
               

               Cow position:
               chr12:14533134-14533471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               11, 30
               

               Conread position:
               233-467
               

               Cow position:
               chr12:36883678-36883929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               233-547
               

               Cow position:
               chr12:6091081-6091419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               67, 22
               

               Conread position:
               233-551
               

               Cow position:
               chr12:41850155-41849823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               226
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               40, 16
               

               Conread position:
               254-562
               

               Cow position:
               chr12:14372960-14372629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               226
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               46, 192
               
Show alignments to all cow chromosomes.