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Cow genome map

           
Conread name:
           
Ss1.1-ruio02_j18.5.5
        

               
Conread position:
               
1-301
               

               
Cow position:
               
chr23:19499249-19499542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
43, 13
               

               
Conread position:
               
1-303
               

               
Cow position:
               
chr23:11932492-11932794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
41, 56
               

               
Conread position:
               
1-370
               

               
Cow position:
               
chr23:24822521-24822149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
158, 66
               

               
Conread position:
               
1-457
               

               
Cow position:
               
chr23:10955752-10956213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 75
               

               
Conread position:
               
1-495
               

               
Cow position:
               
chr23:31276982-31277489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
38, 74
               

               
Conread position:
               
1-499
               

               
Cow position:
               
chr23:6688563-6688060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 23
               

               
Conread position:
               
1-653
               

               
Cow position:
               
chr23:30682433-30681789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
676
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 254
               

               
Conread position:
               
1-688
               

               
Cow position:
               
chr23:9228869-9229569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
718
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
43, 83
               

               
Conread position:
               
1-694
               

               
Cow position:
               
chr23:26293620-26292949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
712
               

               
Alignm identity:
               
470
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 41
               

               
Conread position:
               
1-696
               

               
Cow position:
               
chr23:35275711-35276409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
713
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 78
               

               
Conread position:
               
1-696
               

               
Cow position:
               
chr23:35313761-35313043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
489
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 15
               

               
Conread position:
               
2-137
               

               
Cow position:
               
chr23:10679344-10679207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
38, 74
               

               
Conread position:
               
2-160
               

               
Cow position:
               
chr23:362153-361993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-160
               

               
Cow position:
               
chr23:21371168-21371010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
148, 71
               

               
Conread position:
               
2-163
               

               
Cow position:
               
chr23:10495808-10495649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
2-195
               

               
Cow position:
               
chr23:15038840-15038650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
2-208
               

               
Cow position:
               
chr23:16942088-16941881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
39, 72
               

               
Conread position:
               
2-209
               

               
Cow position:
               
chr23:15532853-15533055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
41, 81
               

               
Conread position:
               
2-210
               

               
Cow position:
               
chr23:28546199-28545990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
33, 75
               

               
Conread position:
               
2-230
               

               
Cow position:
               
chr23:14265829-14266059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-234
               

               
Cow position:
               
chr23:4581515-4581749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-234
               

               
Cow position:
               
chr23:22143821-22143587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-235
               

               
Cow position:
               
chr23:40890263-40890497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-239
               

               
Cow position:
               
chr23:38584403-38584643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
38, 74
               

               
Conread position:
               
2-242
               

               
Cow position:
               
chr23:1924842-1924605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
168, 72
               

               
Conread position:
               
2-242
               

               
Cow position:
               
chr23:10414504-10414256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
29, 72
               

               
Conread position:
               
2-253
               

               
Cow position:
               
chr23:23470221-23470469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
230, 71
               

               
Conread position:
               
2-257
               

               
Cow position:
               
chr23:16057180-16057438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
40, 14
               

               
Conread position:
               
2-262
               

               
Cow position:
               
chr23:7174013-7174273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-262
               

               
Cow position:
               
chr23:25357836-25358085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
230, 50
               

               
Conread position:
               
2-267
               

               
Cow position:
               
chr23:16368435-16368720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
39, 73
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr23:24517376-24517646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
40, 75
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr23:38775298-38775569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
42, 74
               

               
Conread position:
               
2-276
               

               
Cow position:
               
chr23:36485543-36485266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr23:4532217-4531935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
40, 78
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr23:4544828-4544550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
39, 74
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr23:8290943-8291216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
168, 65
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr23:11067912-11068183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
40, 104
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr23:11459753-11459475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr23:11712206-11711928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
36, 68
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr23:19948533-19948256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr23:25676383-25676107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
36, 62
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr23:28118796-28118519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
40, 75
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr23:29471822-29471545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-279
               

               
Cow position:
               
chr23:2721211-2721487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
40, 73
               

               
Conread position:
               
2-281
               

               
Cow position:
               
chr23:17846479-17846760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
30, 73
               

               
Conread position:
               
2-283
               

               
Cow position:
               
chr23:15865860-15865579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
37, 57
               

               
Conread position:
               
2-283
               

               
Cow position:
               
chr23:29699815-29699539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
160, 25
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr23:39812510-39812801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
40, 115
               

               
Conread position:
               
2-289
               

               
Cow position:
               
chr23:6444122-6444412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-292
               

               
Cow position:
               
chr23:10013824-10014116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
36, 74
               

               
Conread position:
               
2-297
               

               
Cow position:
               
chr23:8277353-8277055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
42, 67
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr23:16999925-17000222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
39, 74
               

               
Conread position:
               
2-299
               

               
Cow position:
               
chr23:3888159-3888464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
40, 77
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr23:1604511-1604806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
37, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr23:1941424-1941728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
18, 77
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr23:2032881-2033187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr23:4487479-4487175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr23:5721709-5721409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
39, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr23:6173535-6173230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
18, 72
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr23:7359945-7360245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
40, 60
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr23:9712321-9712028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
41, 75
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr23:10874173-10873871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr23:11844594-11844883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
40, 73
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr23:19316722-19316420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr23:19966907-19967204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 40
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr23:26941258-26941559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
35, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr23:31395640-31395356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
38, 14
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr23:33233832-33233538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
221, 65
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr23:35716411-35716086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
42, 67
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr23:41015418-41015720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-302
               

               
Cow position:
               
chr23:2023599-2023297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr23:2320461-2320155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr23:2369279-2369574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr23:2408726-2408422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
38, 68
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr23:2472812-2472508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
31, 67
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr23:3286248-3286538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
40, 61
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr23:3302344-3302648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr23:3488703-3488400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
37, 58
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr23:4100367-4100671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr23:7293672-7293972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
168, 71
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr23:9215321-9215627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
154, 48
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr23:11376828-11376525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
40, 73
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr23:11405196-11404893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr23:12978235-12978532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
40, 22
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr23:15020407-15020707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
36, 60
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr23:15215361-15215061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
35, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr23:16238089-16237783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
41, 77
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr23:16495787-16495488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
38, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr23:19056872-19056569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr23:21351466-21351162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr23:24120044-24120348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr23:28222191-28222493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
40, 73
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr23:30243976-30244272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
36, 23
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr23:30623011-30622707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr23:36027763-36027459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr23:38560723-38560422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
37, 73
               

               
Conread position:
               
2-304
               

               
Cow position:
               
chr23:10164862-10164566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
42, 75
               

               
Conread position:
               
2-328
               

               
Cow position:
               
chr23:20216440-20216763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
25, 76
               

               
Conread position:
               
2-347
               

               
Cow position:
               
chr23:24469548-24469900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 73
               

               
Conread position:
               
2-349
               

               
Cow position:
               
chr23:31613402-31613746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
37, 57
               

               
Conread position:
               
2-390
               

               
Cow position:
               
chr23:31653689-31654086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-390
               

               
Cow position:
               
chr23:41139937-41139530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
41, 62
               

               
Conread position:
               
2-393
               

               
Cow position:
               
chr23:11814373-11813961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-400
               

               
Cow position:
               
chr23:6698322-6698741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 74
               

               
Conread position:
               
2-479
               

               
Cow position:
               
chr23:5624090-5623604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
14, 72
               

               
Conread position:
               
2-486
               

               
Cow position:
               
chr23:27402623-27403117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
40, 163
               

               
Conread position:
               
2-489
               

               
Cow position:
               
chr23:29043272-29043770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
10, 75
               

               
Conread position:
               
2-490
               

               
Cow position:
               
chr23:3549706-3549208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-491
               

               
Cow position:
               
chr23:4892185-4892685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
36, 74
               

               
Conread position:
               
2-491
               

               
Cow position:
               
chr23:8707880-8708380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-491
               

               
Cow position:
               
chr23:14910942-14910449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
36, 69
               

               
Conread position:
               
2-491
               

               
Cow position:
               
chr23:26828738-26829231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
38, 72
               

               
Conread position:
               
2-515
               

               
Cow position:
               
chr23:1338000-1337505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
44, 73
               

               
Conread position:
               
2-516
               

               
Cow position:
               
chr23:3167529-3168049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-516
               

               
Cow position:
               
chr23:10554735-10554211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
41, 58
               

               
Conread position:
               
2-516
               

               
Cow position:
               
chr23:11128505-11129035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
168, 55
               

               
Conread position:
               
2-517
               

               
Cow position:
               
chr23:7311151-7311674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
37, 74
               

               
Conread position:
               
2-517
               

               
Cow position:
               
chr23:36308695-36309227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
40, 73
               

               
Conread position:
               
2-519
               

               
Cow position:
               
chr23:1321907-1321390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
39, 76
               

               
Conread position:
               
2-531
               

               
Cow position:
               
chr23:40490232-40490771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr23:573775-573207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
36, 71
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr23:610191-610755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
40, 23
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr23:671661-672224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
41, 61
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr23:977560-976996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr23:2528907-2528344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
38, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr23:2723235-2723800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr23:4266925-4267490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr23:9267373-9266809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr23:10936807-10936242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
40, 27
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr23:11079874-11080439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr23:11343982-11344546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
44, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr23:11782275-11782840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr23:14215745-14215182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
40, 67
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr23:15529076-15529624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
40, 61
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr23:19493336-19493907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
40, 170
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr23:22170396-22170960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
40, 76
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr23:24098617-24099179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
36, 60
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr23:25351849-25352415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr23:28084644-28085208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr23:28306334-28306899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr23:28915817-28916381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr23:30634108-30633538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr23:31584791-31585356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr23:31605917-31606482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr23:38934745-38934175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr23:39745349-39745914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr23:39784246-39784811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr23:40710410-40710975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr23:40773817-40774382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-583
               

               
Cow position:
               
chr23:15881630-15881061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
46, 60
               

               
Conread position:
               
2-635
               

               
Cow position:
               
chr23:6070938-6070302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
663
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 76
               

               
Conread position:
               
2-638
               

               
Cow position:
               
chr23:6981915-6982538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
656
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 37
               

               
Conread position:
               
2-647
               

               
Cow position:
               
chr23:7663667-7664284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
665
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
41, 96
               

               
Conread position:
               
2-655
               

               
Cow position:
               
chr23:27596095-27595456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
672
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
42, 54
               

               
Conread position:
               
2-674
               

               
Cow position:
               
chr23:10960445-10961110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
692
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 22
               

               
Conread position:
               
2-679
               

               
Cow position:
               
chr23:38849989-38849316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
703
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
36, 25
               

               
Conread position:
               
2-683
               

               
Cow position:
               
chr23:3451714-3451016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
715
               

               
Alignm identity:
               
453
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
37, 73
               

               
Conread position:
               
2-696
               

               
Cow position:
               
chr23:7249633-7248959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
718
               

               
Alignm identity:
               
470
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 16
               

               
Conread position:
               
3-209
               

               
Cow position:
               
chr23:26541462-26541255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
39, 15
               

               
Conread position:
               
3-257
               

               
Cow position:
               
chr23:26840665-26840918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
156, 43
               

               
Conread position:
               
3-277
               

               
Cow position:
               
chr23:2252214-2252501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
3-293
               

               
Cow position:
               
chr23:34347385-34347673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
40, 73
               

               
Conread position:
               
3-301
               

               
Cow position:
               
chr23:6593438-6593137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
35, 73
               

               
Conread position:
               
3-301
               

               
Cow position:
               
chr23:34468697-34468399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
39, 73
               

               
Conread position:
               
3-303
               

               
Cow position:
               
chr23:31423353-31423052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
39, 73
               

               
Conread position:
               
3-370
               

               
Cow position:
               
chr23:36672349-36672715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 75
               

               
Conread position:
               
3-381
               

               
Cow position:
               
chr23:7129665-7129275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
31, 82
               

               
Conread position:
               
3-389
               

               
Cow position:
               
chr23:8442887-8442488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
40, 13
               

               
Conread position:
               
3-481
               

               
Cow position:
               
chr23:14267786-14268269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 65
               

               
Conread position:
               
3-490
               

               
Cow position:
               
chr23:954310-953814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
39, 73
               

               
Conread position:
               
3-491
               

               
Cow position:
               
chr23:35285030-35284532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
39, 73
               

               
Conread position:
               
3-515
               

               
Cow position:
               
chr23:15866416-15865894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
39, 73
               

               
Conread position:
               
3-561
               

               
Cow position:
               
chr23:39754046-39754602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 13
               

               
Conread position:
               
3-563
               

               
Cow position:
               
chr23:1113442-1114006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
39, 73
               

               
Conread position:
               
4-307
               

               
Cow position:
               
chr23:5882799-5883101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
38, 118
               

               
Conread position:
               
4-407
               

               
Cow position:
               
chr23:30214613-30214220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
92, 42
               

               
Conread position:
               
4-490
               

               
Cow position:
               
chr23:5441408-5441904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
38, 72
               

               
Conread position:
               
4-490
               

               
Cow position:
               
chr23:5458230-5458726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
38, 72
               

               
Conread position:
               
6-297
               

               
Cow position:
               
chr23:7372597-7372894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
37, 70
               

               
Conread position:
               
6-299
               

               
Cow position:
               
chr23:12081150-12081446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 69
               

               
Conread position:
               
6-301
               

               
Cow position:
               
chr23:21009179-21009477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
36, 70
               

               
Conread position:
               
6-303
               

               
Cow position:
               
chr23:20152727-20152427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
37, 70
               

               
Conread position:
               
6-563
               

               
Cow position:
               
chr23:26932811-26932248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
36, 70
               

               
Conread position:
               
10-563
               

               
Cow position:
               
chr23:12864185-12864741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
32, 66
               

               
Conread position:
               
10-594
               

               
Cow position:
               
chr23:19737850-19737251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
34, 60
               

               
Conread position:
               
12-301
               

               
Cow position:
               
chr23:23949283-23949571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
27, 63
               

               
Conread position:
               
16-479
               

               
Cow position:
               
chr23:27899646-27900121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
30, 59
               

               
Conread position:
               
18-294
               

               
Cow position:
               
chr23:41116611-41116331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
20, 150
               

               
Conread position:
               
20-294
               

               
Cow position:
               
chr23:11012017-11011749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
206, 55
               

               
Conread position:
               
20-489
               

               
Cow position:
               
chr23:40553634-40553155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
22, 56
               

               
Conread position:
               
21-283
               

               
Cow position:
               
chr23:6441566-6441312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
16, 55
               

               
Conread position:
               
21-297
               

               
Cow position:
               
chr23:24504408-24504678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
21, 55
               

               
Conread position:
               
21-688
               

               
Cow position:
               
chr23:11017617-11016955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
694
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 53
               

               
Conread position:
               
23-301
               

               
Cow position:
               
chr23:26230636-26230905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
57, 50
               

               
Conread position:
               
23-516
               

               
Cow position:
               
chr23:7844590-7845090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 46
               

               
Conread position:
               
28-303
               

               
Cow position:
               
chr23:20861971-20862244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
11, 47
               

               
Conread position:
               
28-390
               

               
Cow position:
               
chr23:12003575-12003953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
15, 49
               

               
Conread position:
               
28-652
               

               
Cow position:
               
chr23:8065199-8065823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
653
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 138
               

               
Conread position:
               
28-695
               

               
Cow position:
               
chr23:36014397-36015057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
687
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 102
               

               
Conread position:
               
29-317
               

               
Cow position:
               
chr23:9084820-9084540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
195, 44
               

               
Conread position:
               
31-654
               

               
Cow position:
               
chr23:11764576-11765197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
643
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
26, 43
               

               
Conread position:
               
35-301
               

               
Cow position:
               
chr23:20170741-20170479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
24, 31
               

               
Conread position:
               
35-599
               

               
Cow position:
               
chr23:19002762-19002192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 373
               

               
Conread position:
               
36-237
               

               
Cow position:
               
chr23:2437012-2436814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
37-250
               

               
Cow position:
               
chr23:19763454-19763666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
112, 20
               

               
Conread position:
               
37-277
               

               
Cow position:
               
chr23:4660879-4660637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
183, 36
               

               
Conread position:
               
37-301
               

               
Cow position:
               
chr23:1428121-1428381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
133, 36
               

               
Conread position:
               
37-301
               

               
Cow position:
               
chr23:4798674-4798412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
195, 36
               

               
Conread position:
               
37-301
               

               
Cow position:
               
chr23:9733712-9733975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
134, 22
               

               
Conread position:
               
37-301
               

               
Cow position:
               
chr23:11209312-11209575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
136, 36
               

               
Conread position:
               
37-303
               

               
Cow position:
               
chr23:29625745-29626011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
44, 36
               

               
Conread position:
               
37-333
               

               
Cow position:
               
chr23:41538162-41538469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
116, 22
               

               
Conread position:
               
37-394
               

               
Cow position:
               
chr23:30716745-30716391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 22
               

               
Conread position:
               
37-468
               

               
Cow position:
               
chr23:27288942-27288502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
123, 36
               

               
Conread position:
               
37-515
               

               
Cow position:
               
chr23:13511052-13511533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
133, 36
               

               
Conread position:
               
37-516
               

               
Cow position:
               
chr23:28367017-28366523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
113, 36
               

               
Conread position:
               
37-520
               

               
Cow position:
               
chr23:24447344-24447826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
171, 29
               

               
Conread position:
               
37-563
               

               
Cow position:
               
chr23:3827563-3827036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
135, 36
               

               
Conread position:
               
37-650
               

               
Cow position:
               
chr23:1952066-1952675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 29
               

               
Conread position:
               
37-667
               

               
Cow position:
               
chr23:7265889-7265281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 36
               

               
Conread position:
               
37-696
               

               
Cow position:
               
chr23:34078440-34077789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
680
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
195, 36
               

               
Conread position:
               
38-303
               

               
Cow position:
               
chr23:31607973-31607710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
134, 35
               

               
Conread position:
               
38-516
               

               
Cow position:
               
chr23:10852371-10852853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
132, 35
               

               
Conread position:
               
38-529
               

               
Cow position:
               
chr23:21395281-21394787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
194, 35
               

               
Conread position:
               
39-301
               

               
Cow position:
               
chr23:29346950-29346684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
39-655
               

               
Cow position:
               
chr23:13820232-13819613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
635
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 13
               

               
Conread position:
               
41-257
               

               
Cow position:
               
chr23:35683402-35683186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
116, 32
               

               
Conread position:
               
43-283
               

               
Cow position:
               
chr23:29946359-29946119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
189, 23
               

               
Conread position:
               
45-563
               

               
Cow position:
               
chr23:27314278-27314797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
127, 28
               

               
Conread position:
               
46-624
               

               
Cow position:
               
chr23:3314841-3314285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
143, 19
               

               
Conread position:
               
47-300
               

               
Cow position:
               
chr23:25377487-25377741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
151, 26
               

               
Conread position:
               
48-301
               

               
Cow position:
               
chr23:9393356-9393103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
105, 25
               

               
Conread position:
               
52-495
               

               
Cow position:
               
chr23:16246074-16246524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
118, 21
               

               
Conread position:
               
53-516
               

               
Cow position:
               
chr23:16072560-16073031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
179, 20
               

               
Conread position:
               
58-641
               

               
Cow position:
               
chr23:11399435-11400022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 15
               

               
Conread position:
               
61-458
               

               
Cow position:
               
chr23:10671442-10671854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
106, 5
               

               
Conread position:
               
62-303
               

               
Cow position:
               
chr23:25192862-25192621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
110, 11
               

               
Conread position:
               
62-388
               

               
Cow position:
               
chr23:31136640-31136301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
90, 13
               

               
Conread position:
               
64-694
               

               
Cow position:
               
chr23:12825078-12824460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
71, 19
               

               
Conread position:
               
66-491
               

               
Cow position:
               
chr23:23192890-23192460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
237, 165
               

               
Conread position:
               
67-302
               

               
Cow position:
               
chr23:11559930-11559706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
165, 60
               

               
Conread position:
               
68-286
               

               
Cow position:
               
chr23:26308778-26308993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
15, 95
               

               
Conread position:
               
68-457
               

               
Cow position:
               
chr23:644658-645061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
46, 122
               

               
Conread position:
               
68-696
               

               
Cow position:
               
chr23:17691211-17690576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
658
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 88
               

               
Conread position:
               
69-303
               

               
Cow position:
               
chr23:9518116-9517881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
101, 95
               

               
Conread position:
               
70-647
               

               
Cow position:
               
chr23:25086711-25086139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
6, 48
               

               
Conread position:
               
72-289
               

               
Cow position:
               
chr23:21276882-21276664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
75, 69
               

               
Conread position:
               
73-303
               

               
Cow position:
               
chr23:7468507-7468738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
97, 91
               

               
Conread position:
               
75-563
               

               
Cow position:
               
chr23:14575776-14576266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
75, 104
               

               
Conread position:
               
76-286
               

               
Cow position:
               
chr23:17348212-17348007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
80-489
               

               
Cow position:
               
chr23:20733868-20734281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
90, 9
               

               
Conread position:
               
82-666
               

               
Cow position:
               
chr23:36306421-36305854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 74
               

               
Conread position:
               
83-516
               

               
Cow position:
               
chr23:9609695-9610129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
48, 43
               

               
Conread position:
               
83-649
               

               
Cow position:
               
chr23:18878792-18879361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 99
               

               
Conread position:
               
84-302
               

               
Cow position:
               
chr23:17247863-17248077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
79, 111
               

               
Conread position:
               
84-650
               

               
Cow position:
               
chr23:1987528-1986956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 132
               

               
Conread position:
               
86-301
               

               
Cow position:
               
chr23:4609031-4608814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
94-696
               

               
Cow position:
               
chr23:26582526-26581959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 74
               

               
Conread position:
               
95-666
               

               
Cow position:
               
chr23:14890767-14891330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 21
               

               
Conread position:
               
96-281
               

               
Cow position:
               
chr23:11801220-11801409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
97-563
               

               
Cow position:
               
chr23:14386122-14385654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
73, 67
               

               
Conread position:
               
98-303
               

               
Cow position:
               
chr23:2189305-2189096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
67, 110
               

               
Conread position:
               
98-396
               

               
Cow position:
               
chr23:2431306-2431002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
59, 86
               

               
Conread position:
               
106-304
               

               
Cow position:
               
chr23:18944341-18944147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
125, 19
               

               
Conread position:
               
109-390
               

               
Cow position:
               
chr23:29827426-29827131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
63, 20
               

               
Conread position:
               
111-578
               

               
Cow position:
               
chr23:16654517-16655002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
112, 320
               

               
Conread position:
               
119-393
               

               
Cow position:
               
chr23:8446554-8446270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
32, 41
               

               
Conread position:
               
123-694
               

               
Cow position:
               
chr23:11023371-11022809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
109, 51
               

               
Conread position:
               
125-694
               

               
Cow position:
               
chr23:9073357-9072804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 32
               

               
Conread position:
               
127-488
               

               
Cow position:
               
chr23:34995146-34995505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
105, 73
               

               
Conread position:
               
130-674
               

               
Cow position:
               
chr23:36158971-36159506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 36
               

               
Conread position:
               
131-665
               

               
Cow position:
               
chr23:41193807-41194336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
92, 63
               

               
Conread position:
               
134-298
               

               
Cow position:
               
chr23:30379678-30379842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
98, 124
               

               
Conread position:
               
137-300
               

               
Cow position:
               
chr23:5430093-5429929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
142-304
               

               
Cow position:
               
chr23:36462900-36462741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
82, 23
               

               
Conread position:
               
145-516
               

               
Cow position:
               
chr23:20586298-20585911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
87, 33
               

               
Conread position:
               
155-569
               

               
Cow position:
               
chr23:30364560-30364153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
31, 15
               

               
Conread position:
               
157-516
               

               
Cow position:
               
chr23:9467246-9466890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
189, 65
               

               
Conread position:
               
157-673
               

               
Cow position:
               
chr23:35264065-35264585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
17, 87
               

               
Conread position:
               
166-696
               

               
Cow position:
               
chr23:29488103-29488621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
124, 43
               

               
Conread position:
               
170-587
               

               
Cow position:
               
chr23:37162640-37162230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
62, 41
               

               
Conread position:
               
170-655
               

               
Cow position:
               
chr23:1323280-1323772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
133, 66
               

               
Conread position:
               
170-678
               

               
Cow position:
               
chr23:249964-249447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
17, 259
               

               
Conread position:
               
171-655
               

               
Cow position:
               
chr23:28628232-28628728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
40, 101
               

               
Conread position:
               
174-666
               

               
Cow position:
               
chr23:38236506-38236015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
62, 237
               

               
Conread position:
               
185-633
               

               
Cow position:
               
chr23:20819804-20820252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 94
               

               
Conread position:
               
186-490
               

               
Cow position:
               
chr23:40581852-40581551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
46, 121
               

               
Conread position:
               
231-655
               

               
Cow position:
               
chr23:17187718-17188134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
62, 18
               

               
Conread position:
               
247-635
               

               
Cow position:
               
chr23:281281-281676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
27, 9
               

               
Conread position:
               
250-654
               

               
Cow position:
               
chr23:9387403-9387000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
53, 134
               

               
Conread position:
               
257-670
               

               
Cow position:
               
chr23:22815516-22815928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
47, 32
               

               
Conread position:
               
260-636
               

               
Cow position:
               
chr23:11084127-11083751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
19, 42
               

               
Conread position:
               
260-653
               

               
Cow position:
               
chr23:21858241-21857856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
46, 169
               

               
Conread position:
               
267-677
               

               
Cow position:
               
chr23:10977886-10978284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
38, 71
               

               
Conread position:
               
302-655
               

               
Cow position:
               
chr23:15961345-15960991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
35, 54
               

               
Conread position:
               
302-694
               

               
Cow position:
               
chr23:30338099-30338488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 134
               

               
Conread position:
               
304-636
               

               
Cow position:
               
chr23:11559433-11559096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
35, 217
               

               
Conread position:
               
308-637
               

               
Cow position:
               
chr23:16087338-16087020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
68, 110
               

               
Conread position:
               
313-666
               

               
Cow position:
               
chr23:16941803-16941449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
27, 106
               

               
Conread position:
               
314-653
               

               
Cow position:
               
chr23:30380153-30380499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
35, 219
               

               
Conread position:
               
314-696
               

               
Cow position:
               
chr23:14806585-14806966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
23, 127
               

               
Conread position:
               
317-695
               

               
Cow position:
               
chr23:35681158-35680779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
55, 9
               

               
Conread position:
               
339-690
               

               
Cow position:
               
chr23:16706875-16707215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
34, 56
               

               
Conread position:
               
342-694
               

               
Cow position:
               
chr23:12082344-12082675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
34, 53
               

               
Conread position:
               
354-677
               

               
Cow position:
               
chr23:9439681-9439361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
18, 66
               

               
Conread position:
               
357-650
               

               
Cow position:
               
chr23:31615096-31615379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
15, 73
               

               
Conread position:
               
359-688
               

               
Cow position:
               
chr23:17159012-17158693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
45, 12
               

               
Conread position:
               
377-652
               

               
Cow position:
               
chr23:9286769-9287023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
412-675
               

               
Cow position:
               
chr23:30732898-30733157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
134, 22
               

               
Conread position:
               
414-695
               

               
Cow position:
               
chr23:9539420-9539148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
136, 19
               

               
Conread position:
               
428-614
               

               
Cow position:
               
chr23:8987923-8987745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
118, 5
               

               
Conread position:
               
428-653
               

               
Cow position:
               
chr23:15885019-15884806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
118, 5
               

               
Conread position:
               
428-664
               

               
Cow position:
               
chr23:27181268-27181038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
61, 5
               

               
Conread position:
               
428-671
               

               
Cow position:
               
chr23:19251624-19251386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
111, 5
               

               
Conread position:
               
428-696
               

               
Cow position:
               
chr23:7052020-7052275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
433-673
               

               
Cow position:
               
chr23:29953634-29953866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
229, 84
               

               
Conread position:
               
435-696
               

               
Cow position:
               
chr23:17236726-17236976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
438-666
               

               
Cow position:
               
chr23:5927228-5927005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
123, 77
               

               
Conread position:
               
441-690
               

               
Cow position:
               
chr23:35352722-35352953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
41, 10
               

               
Conread position:
               
451-670
               

               
Cow position:
               
chr23:25772998-25773210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
95, 63
               

               
Conread position:
               
451-692
               

               
Cow position:
               
chr23:11366132-11365889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
63, 49
               

               
Conread position:
               
475-693
               

               
Cow position:
               
chr23:1187239-1187023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
69, 28
               

               
Conread position:
               
481-696
               

               
Cow position:
               
chr23:15028746-15028536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
65, 37
               

               
Conread position:
               
482-695
               

               
Cow position:
               
chr23:7904275-7904483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
64, 28
               

               
Conread position:
               
487-692
               

               
Cow position:
               
chr23:22264015-22264215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
59, 32
               

               
Conread position:
               
517-690
               

               
Cow position:
               
chr23:16671127-16670957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
29, 122
               

               
Conread position:
               
518-653
               

               
Cow position:
               
chr23:17492581-17492717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
28, 55
               

               
Conread position:
               
518-696
               

               
Cow position:
               
chr23:17188861-17189037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
82, 23
               

               
Conread position:
               
522-652
               

               
Cow position:
               
chr23:38097772-38097641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
524-696
               

               
Cow position:
               
chr23:10956394-10956567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
22, 161
               
Show alignments to all cow chromosomes.