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Cow genome map

           
Conread name:
           
Ss1.1-ruio02_j18.5.5
        

               
Conread position:
               
1-146
               

               
Cow position:
               
chr24:8885492-8885346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
41, 75
               

               
Conread position:
               
1-146
               

               
Cow position:
               
chr24:21998859-21998713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
32, 76
               

               
Conread position:
               
1-160
               

               
Cow position:
               
chr24:33575844-33576002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
38, 67
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr24:39945967-39945728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
42, 143
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr24:33291909-33291620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
231, 41
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr24:25269745-25269442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
38, 96
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr24:41706221-41705864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
202, 65
               

               
Conread position:
               
1-495
               

               
Cow position:
               
chr24:16056286-16055771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
38, 74
               

               
Conread position:
               
1-606
               

               
Cow position:
               
chr24:12903316-12902711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
1-656
               

               
Cow position:
               
chr24:21555268-21555926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
676
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
11, 76
               

               
Conread position:
               
2-189
               

               
Cow position:
               
chr24:31050537-31050721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
106, 65
               

               
Conread position:
               
2-209
               

               
Cow position:
               
chr24:30681551-30681342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-211
               

               
Cow position:
               
chr24:40896652-40896448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
40, 31
               

               
Conread position:
               
2-223
               

               
Cow position:
               
chr24:2731288-2731074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
209, 65
               

               
Conread position:
               
2-230
               

               
Cow position:
               
chr24:27627500-27627277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
37, 99
               

               
Conread position:
               
2-235
               

               
Cow position:
               
chr24:7088376-7088139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
2-235
               

               
Cow position:
               
chr24:8417902-8418139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
37, 61
               

               
Conread position:
               
2-235
               

               
Cow position:
               
chr24:11940343-11940578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-241
               

               
Cow position:
               
chr24:16646355-16646121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
40, 11
               

               
Conread position:
               
2-256
               

               
Cow position:
               
chr24:16600962-16600706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
33, 73
               

               
Conread position:
               
2-259
               

               
Cow position:
               
chr24:33053430-33053171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
35, 74
               

               
Conread position:
               
2-263
               

               
Cow position:
               
chr24:27345314-27345050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
38, 74
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr24:23161054-23161331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr24:32608893-32609161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-272
               

               
Cow position:
               
chr24:6271693-6271966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
19, 77
               

               
Conread position:
               
2-275
               

               
Cow position:
               
chr24:11748527-11748252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
40, 14
               

               
Conread position:
               
2-275
               

               
Cow position:
               
chr24:13235847-13236124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
40, 67
               

               
Conread position:
               
2-276
               

               
Cow position:
               
chr24:31767509-31767770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
220, 40
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr24:3794064-3794342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr24:12332125-12331847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
40, 75
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr24:14745926-14746200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
40, 131
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr24:22975390-22975669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
40, 75
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr24:38487841-38488119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
35, 74
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr24:42944096-42943823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
41, 14
               

               
Conread position:
               
2-279
               

               
Cow position:
               
chr24:14378919-14378640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr24:5608235-5607950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-283
               

               
Cow position:
               
chr24:16080903-16080620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-283
               

               
Cow position:
               
chr24:17764032-17763737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
41, 72
               

               
Conread position:
               
2-283
               

               
Cow position:
               
chr24:27229753-27229470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
36, 74
               

               
Conread position:
               
2-283
               

               
Cow position:
               
chr24:37481063-37480774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
40, 203
               

               
Conread position:
               
2-283
               

               
Cow position:
               
chr24:45087105-45087388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
39, 75
               

               
Conread position:
               
2-284
               

               
Cow position:
               
chr24:13299223-13298943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
46, 60
               

               
Conread position:
               
2-289
               

               
Cow position:
               
chr24:17566427-17566717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
36, 74
               

               
Conread position:
               
2-289
               

               
Cow position:
               
chr24:27684190-27683907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-289
               

               
Cow position:
               
chr24:31186200-31186477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
230, 127
               

               
Conread position:
               
2-290
               

               
Cow position:
               
chr24:14945906-14946192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-292
               

               
Cow position:
               
chr24:8332271-8332564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
156, 71
               

               
Conread position:
               
2-293
               

               
Cow position:
               
chr24:26793017-26792738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
43, 156
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr24:11462429-11462129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr24:25245287-25245582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
36, 73
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr24:31770058-31770360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
40, 166
               

               
Conread position:
               
2-299
               

               
Cow position:
               
chr24:17998891-17999182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-299
               

               
Cow position:
               
chr24:20507467-20507167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
36, 75
               

               
Conread position:
               
2-299
               

               
Cow position:
               
chr24:32823546-32823252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
168, 63
               

               
Conread position:
               
2-300
               

               
Cow position:
               
chr24:13511444-13511143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
38, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr24:11208025-11207723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr24:12147007-12146705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr24:13496882-13497184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr24:13542606-13542304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
35, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr24:14173201-14172901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
47, 31
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr24:16401833-16401547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
41, 21
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr24:27127520-27127229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
203, 40
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr24:31370710-31370409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
37, 47
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr24:31815820-31816107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
235, 25
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr24:32759538-32759238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr24:35568428-35568729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
41, 67
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr24:39482748-39483055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr24:40300417-40300725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
36, 165
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr24:40519031-40518729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr24:41063039-41063340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-302
               

               
Cow position:
               
chr24:6508555-6508253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
40, 73
               

               
Conread position:
               
2-302
               

               
Cow position:
               
chr24:10243980-10243677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
44, 74
               

               
Conread position:
               
2-302
               

               
Cow position:
               
chr24:12090561-12090856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
222, 40
               

               
Conread position:
               
2-302
               

               
Cow position:
               
chr24:30870387-30870089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr24:144772-144465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr24:207414-207120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr24:5910401-5910706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
39, 68
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr24:6020497-6020193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
44, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr24:6067761-6067461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
40, 60
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr24:6415744-6416047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
40, 60
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr24:6524719-6525030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr24:7749203-7749503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr24:8607911-8608214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
44, 73
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr24:17720838-17720539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr24:24249975-24250279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
40, 75
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr24:29084082-29083773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
40, 73
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr24:30893299-30893000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr24:31067463-31067169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
36, 68
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr24:32231264-32230964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
62, 40
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr24:32740347-32740044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr24:33639916-33639612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr24:35067213-35066908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr24:36027933-36027629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr24:40272424-40272727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr24:40428112-40427806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr24:43882755-43883060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
40, 68
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr24:44506684-44506395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
36, 67
               

               
Conread position:
               
2-304
               

               
Cow position:
               
chr24:5862772-5862467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-304
               

               
Cow position:
               
chr24:14308368-14308680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-304
               

               
Cow position:
               
chr24:40638001-40638300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
36, 75
               

               
Conread position:
               
2-305
               

               
Cow position:
               
chr24:6230451-6230742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
40, 26
               

               
Conread position:
               
2-336
               

               
Cow position:
               
chr24:19675395-19675733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
36, 73
               

               
Conread position:
               
2-390
               

               
Cow position:
               
chr24:37574784-37574390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
230, 71
               

               
Conread position:
               
2-390
               

               
Cow position:
               
chr24:43042454-43042849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
40, 73
               

               
Conread position:
               
2-401
               

               
Cow position:
               
chr24:35617386-35617792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
62, 73
               

               
Conread position:
               
2-451
               

               
Cow position:
               
chr24:27761641-27762098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
44, 72
               

               
Conread position:
               
2-461
               

               
Cow position:
               
chr24:41487455-41487915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
139, 40
               

               
Conread position:
               
2-479
               

               
Cow position:
               
chr24:13492072-13492564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
40, 177
               

               
Conread position:
               
2-479
               

               
Cow position:
               
chr24:22795140-22795623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
39, 74
               

               
Conread position:
               
2-489
               

               
Cow position:
               
chr24:1841290-1840792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
33, 75
               

               
Conread position:
               
2-489
               

               
Cow position:
               
chr24:3163052-3163549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-489
               

               
Cow position:
               
chr24:12293274-12293772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-489
               

               
Cow position:
               
chr24:13117222-13117711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
37, 73
               

               
Conread position:
               
2-489
               

               
Cow position:
               
chr24:20604331-20604828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
37, 73
               

               
Conread position:
               
2-489
               

               
Cow position:
               
chr24:22047487-22046995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
168, 14
               

               
Conread position:
               
2-489
               

               
Cow position:
               
chr24:23052302-23051823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
230, 65
               

               
Conread position:
               
2-489
               

               
Cow position:
               
chr24:29190865-29191362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-489
               

               
Cow position:
               
chr24:32853794-32854286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-489
               

               
Cow position:
               
chr24:39217373-39216877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
45, 73
               

               
Conread position:
               
2-489
               

               
Cow position:
               
chr24:40466831-40466335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-490
               

               
Cow position:
               
chr24:3851177-3851674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-490
               

               
Cow position:
               
chr24:7782542-7782051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-490
               

               
Cow position:
               
chr24:12377533-12377037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
40, 62
               

               
Conread position:
               
2-490
               

               
Cow position:
               
chr24:12696541-12696044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
37, 73
               

               
Conread position:
               
2-490
               

               
Cow position:
               
chr24:13319874-13319375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
11, 75
               

               
Conread position:
               
2-490
               

               
Cow position:
               
chr24:14352934-14353425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
155, 26
               

               
Conread position:
               
2-490
               

               
Cow position:
               
chr24:15084161-15084659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-490
               

               
Cow position:
               
chr24:18740787-18740289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
38, 74
               

               
Conread position:
               
2-490
               

               
Cow position:
               
chr24:26794998-26795496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
38, 74
               

               
Conread position:
               
2-491
               

               
Cow position:
               
chr24:14250001-14249502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
40, 76
               

               
Conread position:
               
2-491
               

               
Cow position:
               
chr24:18113037-18113537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-491
               

               
Cow position:
               
chr24:26412628-26413127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-493
               

               
Cow position:
               
chr24:32359564-32359067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-494
               

               
Cow position:
               
chr24:31308666-31309174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
40, 73
               

               
Conread position:
               
2-499
               

               
Cow position:
               
chr24:15372374-15372879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
79, 37
               

               
Conread position:
               
2-499
               

               
Cow position:
               
chr24:33229923-33230422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
40, 18
               

               
Conread position:
               
2-503
               

               
Cow position:
               
chr24:16996161-16996677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 65
               

               
Conread position:
               
2-508
               

               
Cow position:
               
chr24:36562720-36562211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 75
               

               
Conread position:
               
2-516
               

               
Cow position:
               
chr24:6340286-6340792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
34, 59
               

               
Conread position:
               
2-516
               

               
Cow position:
               
chr24:11839439-11839953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
168, 71
               

               
Conread position:
               
2-516
               

               
Cow position:
               
chr24:11876133-11876658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
40, 68
               

               
Conread position:
               
2-516
               

               
Cow position:
               
chr24:11886412-11886932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
156, 65
               

               
Conread position:
               
2-516
               

               
Cow position:
               
chr24:23486245-23486762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 67
               

               
Conread position:
               
2-516
               

               
Cow position:
               
chr24:29064387-29063871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
35, 74
               

               
Conread position:
               
2-516
               

               
Cow position:
               
chr24:29680050-29679536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
230, 40
               

               
Conread position:
               
2-516
               

               
Cow position:
               
chr24:33239298-33238773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
167, 71
               

               
Conread position:
               
2-553
               

               
Cow position:
               
chr24:20283630-20283076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
40, 75
               

               
Conread position:
               
2-558
               

               
Cow position:
               
chr24:38588364-38588916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
40, 55
               

               
Conread position:
               
2-561
               

               
Cow position:
               
chr24:5929360-5929922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr24:2118452-2119017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
37, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr24:6443019-6443578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
40, 14
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr24:7596981-7596416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr24:8754097-8754662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr24:9045115-9044550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr24:9900953-9901517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr24:10035462-10034897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr24:11081198-11080650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
168, 71
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr24:11215806-11215241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
40, 67
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr24:12447076-12447624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
168, 71
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr24:13304916-13304355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr24:15296697-15297263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr24:16654423-16653857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr24:17161396-17160831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr24:17188692-17188125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
38, 76
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr24:17455629-17456194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr24:22954144-22954687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr24:25372684-25373249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr24:32361278-32360712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
148, 65
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr24:34270774-34271336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr24:38296638-38297203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr24:39067286-39066716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-564
               

               
Cow position:
               
chr24:15675037-15674486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
40, 72
               

               
Conread position:
               
2-564
               

               
Cow position:
               
chr24:27905688-27906251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-578
               

               
Cow position:
               
chr24:11104570-11103990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-588
               

               
Cow position:
               
chr24:19466677-19466093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
37, 47
               

               
Conread position:
               
2-593
               

               
Cow position:
               
chr24:26847021-26846435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
36, 74
               

               
Conread position:
               
2-638
               

               
Cow position:
               
chr24:16651943-16652560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 77
               

               
Conread position:
               
2-645
               

               
Cow position:
               
chr24:29370017-29369364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
671
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 67
               

               
Conread position:
               
2-650
               

               
Cow position:
               
chr24:15416819-15416185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
662
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 67
               

               
Conread position:
               
2-655
               

               
Cow position:
               
chr24:17683711-17683079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
674
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
41, 67
               

               
Conread position:
               
2-672
               

               
Cow position:
               
chr24:19040571-19039919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
694
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 22
               

               
Conread position:
               
2-675
               

               
Cow position:
               
chr24:6342621-6343290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
699
               

               
Alignm identity:
               
453
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 73
               

               
Conread position:
               
2-695
               

               
Cow position:
               
chr24:37857084-37856392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
713
               

               
Alignm identity:
               
467
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 47
               

               
Conread position:
               
2-696
               

               
Cow position:
               
chr24:1473046-1473724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
706
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr24:22840158-22839938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
40, 156
               

               
Conread position:
               
3-289
               

               
Cow position:
               
chr24:30765905-30766178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
229, 20
               

               
Conread position:
               
3-300
               

               
Cow position:
               
chr24:37197140-37196842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
36, 72
               

               
Conread position:
               
3-303
               

               
Cow position:
               
chr24:384504-384804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
40, 77
               

               
Conread position:
               
3-303
               

               
Cow position:
               
chr24:5990605-5990302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
39, 73
               

               
Conread position:
               
3-303
               

               
Cow position:
               
chr24:17406655-17406951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
36, 65
               

               
Conread position:
               
3-303
               

               
Cow position:
               
chr24:40281147-40280842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
40, 73
               

               
Conread position:
               
3-304
               

               
Cow position:
               
chr24:35176863-35176557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
39, 73
               

               
Conread position:
               
3-335
               

               
Cow position:
               
chr24:6183647-6183979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
229, 22
               

               
Conread position:
               
3-407
               

               
Cow position:
               
chr24:6054939-6054540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
35, 21
               

               
Conread position:
               
3-562
               

               
Cow position:
               
chr24:16863175-16863747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
41, 58
               

               
Conread position:
               
3-563
               

               
Cow position:
               
chr24:6325789-6325225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
39, 73
               

               
Conread position:
               
3-564
               

               
Cow position:
               
chr24:17030339-17029764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
40, 66
               

               
Conread position:
               
3-585
               

               
Cow position:
               
chr24:15793435-15792851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
39, 66
               

               
Conread position:
               
3-587
               

               
Cow position:
               
chr24:18266910-18266332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
39, 73
               

               
Conread position:
               
4-301
               

               
Cow position:
               
chr24:31758708-31758418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
39, 159
               

               
Conread position:
               
4-301
               

               
Cow position:
               
chr24:38002479-38002182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
38, 29
               

               
Conread position:
               
4-324
               

               
Cow position:
               
chr24:42938381-42938059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
38, 64
               

               
Conread position:
               
4-563
               

               
Cow position:
               
chr24:36308160-36308723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
38, 72
               

               
Conread position:
               
4-636
               

               
Cow position:
               
chr24:13000559-12999930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
659
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
15, 73
               

               
Conread position:
               
5-299
               

               
Cow position:
               
chr24:15935522-15935818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
30, 13
               

               
Conread position:
               
5-456
               

               
Cow position:
               
chr24:39676340-39675893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
38, 71
               

               
Conread position:
               
5-554
               

               
Cow position:
               
chr24:35503398-35502849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
38, 71
               

               
Conread position:
               
5-621
               

               
Cow position:
               
chr24:40757040-40757650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 58
               

               
Conread position:
               
6-248
               

               
Cow position:
               
chr24:36268220-36267975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
32, 70
               

               
Conread position:
               
6-277
               

               
Cow position:
               
chr24:41006055-41006332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
36, 72
               

               
Conread position:
               
6-284
               

               
Cow position:
               
chr24:25110833-25111114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
36, 70
               

               
Conread position:
               
6-301
               

               
Cow position:
               
chr24:21059020-21059315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
38, 163
               

               
Conread position:
               
7-301
               

               
Cow position:
               
chr24:44989371-44989073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
28, 69
               

               
Conread position:
               
7-454
               

               
Cow position:
               
chr24:5938818-5939277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
36, 71
               

               
Conread position:
               
7-479
               

               
Cow position:
               
chr24:14760486-14760968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
35, 69
               

               
Conread position:
               
8-692
               

               
Cow position:
               
chr24:31796981-31797662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
716
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 69
               

               
Conread position:
               
9-303
               

               
Cow position:
               
chr24:19509812-19509511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
32, 65
               

               
Conread position:
               
9-633
               

               
Cow position:
               
chr24:23491707-23492337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
647
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 78
               

               
Conread position:
               
10-283
               

               
Cow position:
               
chr24:30018529-30018253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
33, 66
               

               
Conread position:
               
11-301
               

               
Cow position:
               
chr24:42916229-42915944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
9, 50
               

               
Conread position:
               
11-390
               

               
Cow position:
               
chr24:19898099-19897720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
225, 62
               

               
Conread position:
               
11-677
               

               
Cow position:
               
chr24:29071828-29071149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
693
               

               
Alignm identity:
               
473
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 58
               

               
Conread position:
               
11-696
               

               
Cow position:
               
chr24:18712575-18713231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
695
               

               
Alignm identity:
               
459
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 65
               

               
Conread position:
               
12-563
               

               
Cow position:
               
chr24:40382246-40381693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
30, 64
               

               
Conread position:
               
15-242
               

               
Cow position:
               
chr24:10697529-10697304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
26, 9
               

               
Conread position:
               
15-294
               

               
Cow position:
               
chr24:2300040-2300314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
21, 60
               

               
Conread position:
               
15-401
               

               
Cow position:
               
chr24:32125358-32124963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
25, 61
               

               
Conread position:
               
19-242
               

               
Cow position:
               
chr24:28688998-28689222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
21, 57
               

               
Conread position:
               
19-303
               

               
Cow position:
               
chr24:24818996-24818710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
21, 57
               

               
Conread position:
               
19-303
               

               
Cow position:
               
chr24:38814241-38814529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
23, 57
               

               
Conread position:
               
19-489
               

               
Cow position:
               
chr24:13373903-13373429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
213, 30
               

               
Conread position:
               
19-501
               

               
Cow position:
               
chr24:202360-201873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
23, 78
               

               
Conread position:
               
19-502
               

               
Cow position:
               
chr24:6160813-6160323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
19, 57
               

               
Conread position:
               
20-696
               

               
Cow position:
               
chr24:22912262-22912946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
702
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 51
               

               
Conread position:
               
21-301
               

               
Cow position:
               
chr24:22288133-22288412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
21, 39
               

               
Conread position:
               
21-301
               

               
Cow position:
               
chr24:25424280-25424562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
21, 55
               

               
Conread position:
               
21-301
               

               
Cow position:
               
chr24:37317975-37317705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
23, 54
               

               
Conread position:
               
23-490
               

               
Cow position:
               
chr24:4666684-4667160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
19, 53
               

               
Conread position:
               
28-286
               

               
Cow position:
               
chr24:5850131-5849873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
108, 45
               

               
Conread position:
               
28-395
               

               
Cow position:
               
chr24:16905339-16904977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
15, 41
               

               
Conread position:
               
28-671
               

               
Cow position:
               
chr24:5768456-5767824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
663
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 41
               

               
Conread position:
               
29-277
               

               
Cow position:
               
chr24:12207723-12207473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
17, 47
               

               
Conread position:
               
29-553
               

               
Cow position:
               
chr24:19815806-19815274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
10, 50
               

               
Conread position:
               
30-563
               

               
Cow position:
               
chr24:11311912-11311376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
142, 43
               

               
Conread position:
               
31-563
               

               
Cow position:
               
chr24:42694125-42693592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
141, 42
               

               
Conread position:
               
32-302
               

               
Cow position:
               
chr24:29375622-29375893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
138, 132
               

               
Conread position:
               
32-396
               

               
Cow position:
               
chr24:3845078-3844714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
21, 44
               

               
Conread position:
               
33-452
               

               
Cow position:
               
chr24:38474423-38473998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
114, 34
               

               
Conread position:
               
33-683
               

               
Cow position:
               
chr24:24583500-24582851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
669
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
8, 30
               

               
Conread position:
               
35-283
               

               
Cow position:
               
chr24:40347461-40347213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
46, 39
               

               
Conread position:
               
37-235
               

               
Cow position:
               
chr24:26173873-26173678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
37-242
               

               
Cow position:
               
chr24:19643878-19644084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
21, 37
               

               
Conread position:
               
37-242
               

               
Cow position:
               
chr24:20367962-20368167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
195, 36
               

               
Conread position:
               
37-277
               

               
Cow position:
               
chr24:14146255-14146015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
195, 36
               

               
Conread position:
               
37-293
               

               
Cow position:
               
chr24:4348103-4347849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
187, 36
               

               
Conread position:
               
37-300
               

               
Cow position:
               
chr24:2074231-2074490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
200, 87
               

               
Conread position:
               
37-301
               

               
Cow position:
               
chr24:12264408-12264144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
135, 37
               

               
Conread position:
               
37-301
               

               
Cow position:
               
chr24:16243344-16243086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
90, 9
               

               
Conread position:
               
37-301
               

               
Cow position:
               
chr24:34493630-34493368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
195, 9
               

               
Conread position:
               
37-303
               

               
Cow position:
               
chr24:43906478-43906744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
135, 36
               

               
Conread position:
               
37-322
               

               
Cow position:
               
chr24:12571534-12571816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
177, 22
               

               
Conread position:
               
37-379
               

               
Cow position:
               
chr24:39054808-39054449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
115, 25
               

               
Conread position:
               
37-393
               

               
Cow position:
               
chr24:37222080-37221723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
299, 28
               

               
Conread position:
               
37-451
               

               
Cow position:
               
chr24:16483249-16482816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
13, 37
               

               
Conread position:
               
38-389
               

               
Cow position:
               
chr24:22821288-22821647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
128, 35
               

               
Conread position:
               
39-276
               

               
Cow position:
               
chr24:29170282-29170517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
193, 34
               

               
Conread position:
               
39-494
               

               
Cow position:
               
chr24:28723717-28724197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
156, 34
               

               
Conread position:
               
40-298
               

               
Cow position:
               
chr24:35837177-35836920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
184, 158
               

               
Conread position:
               
40-490
               

               
Cow position:
               
chr24:40789972-40789515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
132, 33
               

               
Conread position:
               
40-598
               

               
Cow position:
               
chr24:16171274-16171826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
228, 33
               

               
Conread position:
               
41-303
               

               
Cow position:
               
chr24:35793472-35793734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
102, 25
               

               
Conread position:
               
42-268
               

               
Cow position:
               
chr24:3120203-3120426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
207, 31
               

               
Conread position:
               
42-300
               

               
Cow position:
               
chr24:6507321-6507066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
62, 20
               

               
Conread position:
               
42-516
               

               
Cow position:
               
chr24:37036908-37037390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
128, 31
               

               
Conread position:
               
43-303
               

               
Cow position:
               
chr24:39160245-39159986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
6, 19
               

               
Conread position:
               
44-516
               

               
Cow position:
               
chr24:27763099-27763576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
126, 31
               

               
Conread position:
               
45-302
               

               
Cow position:
               
chr24:2817055-2817309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
187, 28
               

               
Conread position:
               
46-275
               

               
Cow position:
               
chr24:33035724-33035495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
178, 27
               

               
Conread position:
               
46-558
               

               
Cow position:
               
chr24:6502022-6501512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
152, 27
               

               
Conread position:
               
47-372
               

               
Cow position:
               
chr24:39301249-39301570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
185, 26
               

               
Conread position:
               
48-298
               

               
Cow position:
               
chr24:2088400-2088151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
64, 12
               

               
Conread position:
               
48-303
               

               
Cow position:
               
chr24:41333589-41333335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
184, 25
               

               
Conread position:
               
48-370
               

               
Cow position:
               
chr24:19373652-19373329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
38, 18
               

               
Conread position:
               
48-493
               

               
Cow position:
               
chr24:38592942-38593398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
125, 25
               

               
Conread position:
               
48-563
               

               
Cow position:
               
chr24:35877630-35877114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
122, 25
               

               
Conread position:
               
50-301
               

               
Cow position:
               
chr24:19782419-19782663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
31, 23
               

               
Conread position:
               
51-276
               

               
Cow position:
               
chr24:42106865-42106650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
136, 22
               

               
Conread position:
               
55-654
               

               
Cow position:
               
chr24:18143059-18142461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
177, 22
               

               
Conread position:
               
58-292
               

               
Cow position:
               
chr24:4616436-4616202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
174, 15
               

               
Conread position:
               
59-387
               

               
Cow position:
               
chr24:3332908-3332590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
175, 76
               

               
Conread position:
               
61-303
               

               
Cow position:
               
chr24:25710395-25710153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
109, 12
               

               
Conread position:
               
61-563
               

               
Cow position:
               
chr24:28494387-28494890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
111, 12
               

               
Conread position:
               
66-301
               

               
Cow position:
               
chr24:33008135-33007895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
56, 103
               

               
Conread position:
               
66-563
               

               
Cow position:
               
chr24:8331847-8331362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
12, 24
               

               
Conread position:
               
67-301
               

               
Cow position:
               
chr24:16268916-16268685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
103, 26
               

               
Conread position:
               
67-301
               

               
Cow position:
               
chr24:17865122-17864887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
105, 97
               

               
Conread position:
               
67-303
               

               
Cow position:
               
chr24:36106058-36105821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
105, 97
               

               
Conread position:
               
68-303
               

               
Cow position:
               
chr24:43733105-43733332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
169, 49
               

               
Conread position:
               
69-283
               

               
Cow position:
               
chr24:9088147-9087931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
74, 68
               

               
Conread position:
               
69-303
               

               
Cow position:
               
chr24:18234425-18234660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
103, 95
               

               
Conread position:
               
71-480
               

               
Cow position:
               
chr24:32303784-32303363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
161, 98
               

               
Conread position:
               
78-296
               

               
Cow position:
               
chr24:34870552-34870333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
78-690
               

               
Cow position:
               
chr24:24069128-24068538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
192, 13
               

               
Conread position:
               
80-301
               

               
Cow position:
               
chr24:20294062-20293837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
80-303
               

               
Cow position:
               
chr24:19406823-19406603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
92, 9
               

               
Conread position:
               
80-303
               

               
Cow position:
               
chr24:33938516-33938740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
84-656
               

               
Cow position:
               
chr24:23140656-23140087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 178
               

               
Conread position:
               
86-460
               

               
Cow position:
               
chr24:39258486-39258863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
256, 145
               

               
Conread position:
               
88-431
               

               
Cow position:
               
chr24:33010764-33010404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
5, 320
               

               
Conread position:
               
88-496
               

               
Cow position:
               
chr24:36555489-36555074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
82, 76
               

               
Conread position:
               
89-298
               

               
Cow position:
               
chr24:29033172-29033377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
143, 72
               

               
Conread position:
               
90-653
               

               
Cow position:
               
chr24:36714898-36715456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
146, 19
               

               
Conread position:
               
94-696
               

               
Cow position:
               
chr24:37434553-37433954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 322
               

               
Conread position:
               
96-283
               

               
Cow position:
               
chr24:38696846-38697029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
136, 17
               

               
Conread position:
               
96-301
               

               
Cow position:
               
chr24:39198882-39199087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
62, 136
               

               
Conread position:
               
97-479
               

               
Cow position:
               
chr24:19679220-19679610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
73, 67
               

               
Conread position:
               
97-563
               

               
Cow position:
               
chr24:12518492-12518960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
73, 67
               

               
Conread position:
               
97-563
               

               
Cow position:
               
chr24:27153970-27153506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
135, 67
               

               
Conread position:
               
98-301
               

               
Cow position:
               
chr24:15358852-15359057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
63, 102
               

               
Conread position:
               
98-490
               

               
Cow position:
               
chr24:13179066-13178666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
74, 66
               

               
Conread position:
               
98-652
               

               
Cow position:
               
chr24:16563981-16564543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 64
               

               
Conread position:
               
98-675
               

               
Cow position:
               
chr24:37337821-37337253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
62, 262
               

               
Conread position:
               
101-303
               

               
Cow position:
               
chr24:32693058-32693260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
69, 61
               

               
Conread position:
               
101-691
               

               
Cow position:
               
chr24:44875830-44875262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
123, 154
               

               
Conread position:
               
104-407
               

               
Cow position:
               
chr24:32083923-32083616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
129, 15
               

               
Conread position:
               
107-388
               

               
Cow position:
               
chr24:42888371-42888654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
94, 56
               

               
Conread position:
               
111-301
               

               
Cow position:
               
chr24:25229720-25229530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
15, 45
               

               
Conread position:
               
115-638
               

               
Cow position:
               
chr24:28536897-28537415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
117, 14
               

               
Conread position:
               
116-641
               

               
Cow position:
               
chr24:20326200-20326722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 53
               

               
Conread position:
               
123-695
               

               
Cow position:
               
chr24:37514773-37514206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 96
               

               
Conread position:
               
127-664
               

               
Cow position:
               
chr24:19073774-19074309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 62
               

               
Conread position:
               
127-696
               

               
Cow position:
               
chr24:34491745-34492297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
97, 57
               

               
Conread position:
               
135-500
               

               
Cow position:
               
chr24:15344490-15344870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
97, 26
               

               
Conread position:
               
138-650
               

               
Cow position:
               
chr24:17925418-17924914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 24
               

               
Conread position:
               
141-471
               

               
Cow position:
               
chr24:5885352-5885013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
19, 25
               

               
Conread position:
               
144-597
               

               
Cow position:
               
chr24:29845868-29845425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
80, 257
               

               
Conread position:
               
155-637
               

               
Cow position:
               
chr24:18913947-18914433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
77, 7
               

               
Conread position:
               
166-367
               

               
Cow position:
               
chr24:31449128-31449329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
58, 173
               

               
Conread position:
               
166-468
               

               
Cow position:
               
chr24:30278151-30278461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
66, 41
               

               
Conread position:
               
170-630
               

               
Cow position:
               
chr24:25265098-25265551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
26, 77
               

               
Conread position:
               
170-695
               

               
Cow position:
               
chr24:33138385-33138903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
31, 24
               

               
Conread position:
               
171-370
               

               
Cow position:
               
chr24:37981475-37981264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
61, 108
               

               
Conread position:
               
172-688
               

               
Cow position:
               
chr24:44137436-44136925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
60, 253
               

               
Conread position:
               
172-695
               

               
Cow position:
               
chr24:29390985-29390479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
60, 114
               

               
Conread position:
               
174-563
               

               
Cow position:
               
chr24:32418136-32417756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
113, 229
               

               
Conread position:
               
174-653
               

               
Cow position:
               
chr24:6236974-6237436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
129, 42
               

               
Conread position:
               
181-672
               

               
Cow position:
               
chr24:24455158-24455656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
58, 38
               

               
Conread position:
               
186-692
               

               
Cow position:
               
chr24:34197253-34197765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
46, 256
               

               
Conread position:
               
204-655
               

               
Cow position:
               
chr24:6192547-6192978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
167, 84
               

               
Conread position:
               
216-369
               

               
Cow position:
               
chr24:14741285-14741444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
223-516
               

               
Cow position:
               
chr24:6112990-6112676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
37, 69
               

               
Conread position:
               
230-575
               

               
Cow position:
               
chr24:37787606-37787931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
166, 27
               

               
Conread position:
               
244-654
               

               
Cow position:
               
chr24:16303422-16303033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
45, 55
               

               
Conread position:
               
248-690
               

               
Cow position:
               
chr24:38444359-38444798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
56, 101
               

               
Conread position:
               
302-672
               

               
Cow position:
               
chr24:39769937-39769578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
88, 24
               

               
Conread position:
               
302-674
               

               
Cow position:
               
chr24:12193902-12193536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
41, 133
               

               
Conread position:
               
302-690
               

               
Cow position:
               
chr24:16631386-16631762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
40, 75
               

               
Conread position:
               
313-651
               

               
Cow position:
               
chr24:37716122-37715800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
64, 103
               

               
Conread position:
               
314-653
               

               
Cow position:
               
chr24:25100750-25100412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
58, 102
               

               
Conread position:
               
314-696
               

               
Cow position:
               
chr24:23988121-23988494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 8
               

               
Conread position:
               
332-679
               

               
Cow position:
               
chr24:23715944-23715616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
40, 13
               

               
Conread position:
               
338-621
               

               
Cow position:
               
chr24:16207565-16207299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
31, 62
               

               
Conread position:
               
346-583
               

               
Cow position:
               
chr24:25087722-25087952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
30, 68
               

               
Conread position:
               
362-693
               

               
Cow position:
               
chr24:38819315-38819634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
8, 32
               

               
Conread position:
               
374-694
               

               
Cow position:
               
chr24:18846641-18846957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
21, 78
               

               
Conread position:
               
415-673
               

               
Cow position:
               
chr24:24626669-24626423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
132, 18
               

               
Conread position:
               
416-673
               

               
Cow position:
               
chr24:6003905-6003656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
427-664
               

               
Cow position:
               
chr24:2608797-2608573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
428-653
               

               
Cow position:
               
chr24:43777881-43778098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
117, 82
               

               
Conread position:
               
433-665
               

               
Cow position:
               
chr24:26110707-26110947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
63, 52
               

               
Conread position:
               
433-696
               

               
Cow position:
               
chr24:17633350-17633602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
18, 81
               

               
Conread position:
               
435-651
               

               
Cow position:
               
chr24:38263982-38264192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
115, 75
               

               
Conread position:
               
436-669
               

               
Cow position:
               
chr24:20289495-20289270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
96, 20
               

               
Conread position:
               
442-633
               

               
Cow position:
               
chr24:36862818-36863003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
104, 68
               

               
Conread position:
               
472-655
               

               
Cow position:
               
chr24:19907414-19907589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
483-696
               

               
Cow position:
               
chr24:23807901-23808106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
63, 27
               

               
Conread position:
               
491-696
               

               
Cow position:
               
chr24:37532472-37532679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
27, 11
               

               
Conread position:
               
519-695
               

               
Cow position:
               
chr24:15276181-15276359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
27, 77
               

               
Conread position:
               
545-696
               

               
Cow position:
               
chr24:31641704-31641851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
30, 0
               
Show alignments to all cow chromosomes.