Cow genome map

Conread name: Ss1.1-ruio02_j18.5.5

Conread position: 1-160
Cow position: chr27:309968-309806 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 117
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 73, 22

Conread position: 1-160
Cow position: chr27:17864467-17864627 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 42, 69

Conread position: 1-182
Cow position: chr27:27234662-27234479 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 27, 77

Conread position: 1-230
Cow position: chr27:11954582-11954813 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 153
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 39, 75

Conread position: 1-302
Cow position: chr27:12571901-12571601 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 208
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 231, 65

Conread position: 1-303
Cow position: chr27:1031065-1030760 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 200
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 41, 75

Conread position: 1-307
Cow position: chr27:22013712-22014024 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 217
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 42, 75

Conread position: 1-494
Cow position: chr27:15349128-15349624 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 312
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 42, 61

Conread position: 1-579
Cow position: chr27:11326485-11325909 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 367
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 42, 49

Conread position: 1-638
Cow position: chr27:17049961-17049337 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 78

Conread position: 1-648
Cow position: chr27:8320030-8320657 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 426
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 231, 66

Conread position: 1-664
Cow position: chr27:11678142-11677485 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 22

Conread position: 2-148
Cow position: chr27:16836895-16836748 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 41, 64

Conread position: 2-163
Cow position: chr27:16110644-16110807 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 41, 74

Conread position: 2-189
Cow position: chr27:31547060-31546870 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 39, 74

Conread position: 2-200
Cow position: chr27:16581684-16581487 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 41, 18

Conread position: 2-206
Cow position: chr27:23233480-23233685 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 146
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 36, 69

Conread position: 2-208
Cow position: chr27:13182800-13182591 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 40, 74

Conread position: 2-209
Cow position: chr27:791556-791347 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 40, 74

Conread position: 2-209
Cow position: chr27:30177023-30176814 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 146
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 40, 74

Conread position: 2-225
Cow position: chr27:16076218-16075995 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 154
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 40, 74

Conread position: 2-256
Cow position: chr27:28235887-28235630 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 185
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 37, 14

Conread position: 2-277
Cow position: chr27:1293737-1294015 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 187
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 40, 74

Conread position: 2-277
Cow position: chr27:3235224-3235500 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 181
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 32, 16

Conread position: 2-277
Cow position: chr27:3340436-3340159 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 197
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 40, 74

Conread position: 2-277
Cow position: chr27:8202510-8202233 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 194
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 40, 74

Conread position: 2-277
Cow position: chr27:8335461-8335188 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 184
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 39, 68

Conread position: 2-277
Cow position: chr27:8972935-8973213 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 190
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 79, 65

Conread position: 2-277
Cow position: chr27:9333157-9333435 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 185
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 40, 74

Conread position: 2-277
Cow position: chr27:12549790-12549512 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 184
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 40, 74

Conread position: 2-277
Cow position: chr27:16260301-16260563 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 189
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 40, 25

Conread position: 2-277
Cow position: chr27:22400457-22400181 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 184
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 74

Conread position: 2-277
Cow position: chr27:25784274-25783996 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 186
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 41, 74

Conread position: 2-277
Cow position: chr27:26330422-26330695 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 185
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 40, 75

Conread position: 2-277
Cow position: chr27:26598557-26598278 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 192
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 127, 71

Conread position: 2-277
Cow position: chr27:28081621-28081899 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 186
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 40, 75

Conread position: 2-277
Cow position: chr27:29811794-29812069 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 187
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 168, 71

Conread position: 2-283
Cow position: chr27:4509264-4508980 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 195
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 38, 74

Conread position: 2-283
Cow position: chr27:4665158-4664873 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 192
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 36, 74

Conread position: 2-283
Cow position: chr27:25885289-25885572 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 201
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 41, 74

Conread position: 2-283
Cow position: chr27:31268704-31268981 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 192
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 40, 76

Conread position: 2-285
Cow position: chr27:584448-584161 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 197
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 41, 78

Conread position: 2-285
Cow position: chr27:24055172-24055459 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 189
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 44, 63

Conread position: 2-289
Cow position: chr27:7748500-7748784 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 201
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 41, 74

Conread position: 2-289
Cow position: chr27:10670526-10670810 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 197
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 40, 76

Conread position: 2-289
Cow position: chr27:12282177-12282456 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 193
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 71, 0

Conread position: 2-294
Cow position: chr27:29891104-29891392 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 197
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 37, 64

Conread position: 2-298
Cow position: chr27:10306597-10306889 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 197
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 168, 22

Conread position: 2-298
Cow position: chr27:12555055-12554761 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 196
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 41, 23

Conread position: 2-298
Cow position: chr27:19932067-19931769 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 199
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 40, 74

Conread position: 2-301
Cow position: chr27:5853237-5853538 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 192
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 41, 74

Conread position: 2-301
Cow position: chr27:9254652-9254355 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 211
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 37, 50

Conread position: 2-301
Cow position: chr27:10283623-10283923 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 194
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 41, 67

Conread position: 2-301
Cow position: chr27:11470023-11470322 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 214
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 40, 14

Conread position: 2-301
Cow position: chr27:11651586-11651888 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 210
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 40, 74

Conread position: 2-301
Cow position: chr27:12018832-12018539 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 201
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 41, 61

Conread position: 2-301
Cow position: chr27:13198580-13198283 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 204
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 40, 74

Conread position: 2-301
Cow position: chr27:13353796-13354097 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 203
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 36, 52

Conread position: 2-301
Cow position: chr27:13695826-13696128 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 206
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 40, 67

Conread position: 2-301
Cow position: chr27:16428148-16428446 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 207
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 37, 73

Conread position: 2-301
Cow position: chr27:16551138-16550841 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 207
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 41, 9

Conread position: 2-301
Cow position: chr27:17923398-17923700 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 205
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 29, 75

Conread position: 2-301
Cow position: chr27:18954532-18954826 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 200
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 41, 83

Conread position: 2-301
Cow position: chr27:19388700-19388405 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 206
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 40, 74

Conread position: 2-301
Cow position: chr27:20001326-20001024 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 204
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 41, 74

Conread position: 2-301
Cow position: chr27:30476756-30476448 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 213
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 41, 11

Conread position: 2-302
Cow position: chr27:3112096-3111795 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 194
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 31, 73

Conread position: 2-302
Cow position: chr27:26644765-26644461 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 206
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 40, 74

Conread position: 2-303
Cow position: chr27:165430-165128 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 205
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 36, 68

Conread position: 2-303
Cow position: chr27:1636271-1636573 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 205
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 40, 75

Conread position: 2-303
Cow position: chr27:3232048-3231746 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 200
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 37, 74

Conread position: 2-303
Cow position: chr27:3653210-3652906 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 205
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 40, 74

Conread position: 2-303
Cow position: chr27:8187322-8187612 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 202
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 40, 74

Conread position: 2-303
Cow position: chr27:8201425-8201730 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 197
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 14, 75

Conread position: 2-303
Cow position: chr27:8959527-8959223 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 211
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 40, 74

Conread position: 2-303
Cow position: chr27:10579433-10579737 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 200
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 40, 74

Conread position: 2-303
Cow position: chr27:11095319-11095015 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 207
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 40, 74

Conread position: 2-303
Cow position: chr27:11481421-11481724 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 200
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 40, 74

Conread position: 2-303
Cow position: chr27:12751021-12751324 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 203
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 40, 74

Conread position: 2-303
Cow position: chr27:13409485-13409789 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 211
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 39, 74

Conread position: 2-303
Cow position: chr27:14380924-14381230 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 199
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 41, 74

Conread position: 2-303
Cow position: chr27:15033401-15033098 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 198
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 40, 53

Conread position: 2-303
Cow position: chr27:15100131-15100433 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 201
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 40, 25

Conread position: 2-303
Cow position: chr27:15312879-15312575 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 210
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 40, 74

Conread position: 2-303
Cow position: chr27:16787510-16787210 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 203
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 168, 71

Conread position: 2-303
Cow position: chr27:17476725-17476429 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 203
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 168, 40

Conread position: 2-303
Cow position: chr27:19963152-19962858 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 204
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 40, 61

Conread position: 2-303
Cow position: chr27:20828022-20828326 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 209
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 41, 74

Conread position: 2-303
Cow position: chr27:23658059-23658356 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 202
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 38, 74

Conread position: 2-303
Cow position: chr27:24260336-24260043 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 202
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 230, 24

Conread position: 2-303
Cow position: chr27:24295770-24295466 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 205
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 40, 74

Conread position: 2-303
Cow position: chr27:26945574-26945267 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 210
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 40, 79

Conread position: 2-303
Cow position: chr27:27291883-27292187 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 203
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 40, 74

Conread position: 2-303
Cow position: chr27:27728996-27728700 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 201
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 61, 74

Conread position: 2-303
Cow position: chr27:30446904-30446603 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 209
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 41, 18

Conread position: 2-303
Cow position: chr27:30641320-30641020 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 200
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 36, 76

Conread position: 2-303
Cow position: chr27:30777229-30776929 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 206
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 39, 74

Conread position: 2-306
Cow position: chr27:2557504-2557197 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 203
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 47, 74

Conread position: 2-315
Cow position: chr27:18693106-18693419 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 223
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 74, 40

Conread position: 2-334
Cow position: chr27:5268839-5269160 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 218
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 36, 22

Conread position: 2-364
Cow position: chr27:22586320-22586700 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 246
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 37, 78

Conread position: 2-390
Cow position: chr27:10321552-10321954 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 263
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 40, 74

Conread position: 2-393
Cow position: chr27:16117671-16117266 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 272
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 37, 76

Conread position: 2-397
Cow position: chr27:12072660-12073054 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 262
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 37, 136

Conread position: 2-401
Cow position: chr27:8297186-8296774 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 270
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 63

Conread position: 2-460
Cow position: chr27:8429743-8430214 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 305
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 41, 72

Conread position: 2-490
Cow position: chr27:5423705-5424203 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 316
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 301, 64

Conread position: 2-490
Cow position: chr27:29446615-29446119 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 317
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 40, 74

Conread position: 2-491
Cow position: chr27:9989389-9988889 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 314
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 38, 73

Conread position: 2-491
Cow position: chr27:10383920-10384420 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 306
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 37, 74

Conread position: 2-491
Cow position: chr27:16030907-16030409 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 324
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 40, 74

Conread position: 2-491
Cow position: chr27:28907743-28907250 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 309
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 36, 54

Conread position: 2-492
Cow position: chr27:11434656-11435152 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 316
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 37, 11

Conread position: 2-493
Cow position: chr27:28984255-28984761 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 324
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 40, 74

Conread position: 2-495
Cow position: chr27:25971187-25970687 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 320
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 42, 74

Conread position: 2-514
Cow position: chr27:12190764-12191290 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 341
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 40, 67

Conread position: 2-515
Cow position: chr27:21986574-21986058 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 74

Conread position: 2-516
Cow position: chr27:8942014-8942526 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 330
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 34, 74

Conread position: 2-516
Cow position: chr27:15272584-15272063 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 74

Conread position: 2-516
Cow position: chr27:21350337-21350858 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 336
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 40, 67

Conread position: 2-516
Cow position: chr27:26653975-26653462 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 338
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 209, 44

Conread position: 2-516
Cow position: chr27:26785305-26785822 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 324
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 222, 65

Conread position: 2-553
Cow position: chr27:15871842-15871285 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 353
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 40, 74

Conread position: 2-553
Cow position: chr27:21283756-21283204 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 365
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 37, 22

Conread position: 2-563
Cow position: chr27:523510-524076 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 368
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 36, 68

Conread position: 2-563
Cow position: chr27:526401-526964 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 365
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 40, 74

Conread position: 2-563
Cow position: chr27:724034-724599 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 367
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 40, 74

Conread position: 2-563
Cow position: chr27:1481383-1481948 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 371
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 40, 74

Conread position: 2-563
Cow position: chr27:1521164-1521734 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 374
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 40, 74

Conread position: 2-563
Cow position: chr27:2001335-2001899 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 369
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 40, 62

Conread position: 2-563
Cow position: chr27:3649971-3650537 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 371
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 40, 74

Conread position: 2-563
Cow position: chr27:4768811-4769370 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 362
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 41, 22

Conread position: 2-563
Cow position: chr27:8743606-8743048 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 363
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 170, 40

Conread position: 2-563
Cow position: chr27:12006638-12007203 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 371
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 38, 74

Conread position: 2-563
Cow position: chr27:12147382-12147947 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 370
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 40, 74

Conread position: 2-563
Cow position: chr27:13422674-13422109 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 369
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 40, 74

Conread position: 2-563
Cow position: chr27:13901613-13902178 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 358
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 44, 74

Conread position: 2-563
Cow position: chr27:15178894-15178321 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 364
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 40, 74

Conread position: 2-563
Cow position: chr27:16045219-16045785 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 367
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 36, 165

Conread position: 2-563
Cow position: chr27:19300076-19299511 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 360
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 40, 74

Conread position: 2-563
Cow position: chr27:19487494-19486929 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 370
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 40, 74

Conread position: 2-563
Cow position: chr27:19523220-19522654 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 370
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 40, 74

Conread position: 2-563
Cow position: chr27:22797169-22796605 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 367
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 40, 74

Conread position: 2-563
Cow position: chr27:23893824-23894389 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 368
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 40, 74

Conread position: 2-563
Cow position: chr27:26545245-26545807 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 360
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 40, 74

Conread position: 2-563
Cow position: chr27:29035892-29035327 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 362
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 37, 74

Conread position: 2-563
Cow position: chr27:29374416-29373851 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 364
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 40, 74

Conread position: 2-563
Cow position: chr27:30306776-30306222 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 364
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 41, 74

Conread position: 2-627
Cow position: chr27:23794139-23793555 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 416
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 147, 38

Conread position: 2-653
Cow position: chr27:617986-617334 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 413
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 44, 74

Conread position: 2-655
Cow position: chr27:7818978-7818304 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 431
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 40, 22

Conread position: 2-655
Cow position: chr27:9122431-9121769 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 413
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 41, 74

Conread position: 2-655
Cow position: chr27:15508743-15509407 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 74

Conread position: 2-655
Cow position: chr27:15644973-15645624 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 434
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 42, 74

Conread position: 2-682
Cow position: chr27:21260077-21259409 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 445
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 36, 63

Conread position: 3-277
Cow position: chr27:19731339-19731061 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 183
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 43, 25

Conread position: 3-283
Cow position: chr27:21247084-21246807 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 193
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 39, 74

Conread position: 3-289
Cow position: chr27:27127762-27127472 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 198
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 41, 54

Conread position: 3-301
Cow position: chr27:8291340-8291634 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 197
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 37, 67

Conread position: 3-303
Cow position: chr27:1354275-1353974 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 203
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 36, 74

Conread position: 3-303
Cow position: chr27:25800720-25800417 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 199
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 39, 73

Conread position: 3-516
Cow position: chr27:26856531-26857053 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 338
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 39, 74

Conread position: 3-563
Cow position: chr27:20865851-20866409 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 368
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 40, 73

Conread position: 4-277
Cow position: chr27:18943383-18943661 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 193
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 39, 74

Conread position: 4-283
Cow position: chr27:29046069-29046353 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 195
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 38, 82

Conread position: 4-301
Cow position: chr27:12489902-12489612 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 213
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 220, 69

Conread position: 4-301
Cow position: chr27:23074633-23074333 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 210
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 34, 217

Conread position: 4-301
Cow position: chr27:27527529-27527828 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 211
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 34, 71

Conread position: 4-470
Cow position: chr27:12173428-12173908 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 178

Conread position: 4-490
Cow position: chr27:27820010-27819504 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 325
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 37, 66

Conread position: 4-495
Cow position: chr27:9262786-9262285 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 330
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 33, 81

Conread position: 5-298
Cow position: chr27:26034028-26033739 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 207
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 34, 13

Conread position: 6-283
Cow position: chr27:25112660-25112939 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 182
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 21, 70

Conread position: 6-303
Cow position: chr27:344436-344139 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 194
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 36, 70

Conread position: 6-303
Cow position: chr27:2331997-2332294 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 197
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 36, 54

Conread position: 9-582
Cow position: chr27:24115594-24116178 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 60

Conread position: 12-301
Cow position: chr27:24065874-24066163 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 208
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 31, 64

Conread position: 12-542
Cow position: chr27:11606386-11605852 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 346
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 30, 64

Conread position: 18-620
Cow position: chr27:7418217-7418824 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 391
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 26, 58

Conread position: 18-685
Cow position: chr27:6335807-6335156 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 49

Conread position: 19-301
Cow position: chr27:12277615-12277898 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 187
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 23, 57

Conread position: 19-305
Cow position: chr27:5836328-5836617 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 186
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 20, 57

Conread position: 19-516
Cow position: chr27:537121-536615 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 322
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 19, 50

Conread position: 20-296
Cow position: chr27:1884885-1884607 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 185
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 18, 58

Conread position: 20-301
Cow position: chr27:12112049-12112331 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 196
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 19, 152

Conread position: 22-298
Cow position: chr27:1141206-1141486 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 184
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 36, 99

Conread position: 35-458
Cow position: chr27:22559720-22559293 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 274
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 197, 38

Conread position: 36-283
Cow position: chr27:16963961-16963714 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 165
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 80, 37

Conread position: 37-303
Cow position: chr27:12098234-12097972 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 171
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 195, 35

Conread position: 37-386
Cow position: chr27:17362223-17361867 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 235
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 123, 36

Conread position: 37-563
Cow position: chr27:12006153-12005626 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 342
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 135, 36

Conread position: 38-299
Cow position: chr27:4824330-4824586 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 175
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 185, 28

Conread position: 38-303
Cow position: chr27:30921795-30921528 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 176
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 24, 51

Conread position: 39-241
Cow position: chr27:2638150-2638352 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 140
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 134, 34

Conread position: 39-301
Cow position: chr27:4719261-4719517 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 175
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 118, 33

Conread position: 39-301
Cow position: chr27:30677559-30677298 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 175
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 131, 34

Conread position: 40-301
Cow position: chr27:1502024-1502285 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 182
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 130, 33

Conread position: 42-212
Cow position: chr27:14381515-14381683 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 123, 0

Conread position: 45-301
Cow position: chr27:29492929-29493183 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 169
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 175, 28

Conread position: 45-495
Cow position: chr27:9372140-9371679 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 294
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 192, 28

Conread position: 45-563
Cow position: chr27:17403531-17403012 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 335
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 125, 28

Conread position: 48-277
Cow position: chr27:5861837-5861608 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 152
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 90, 25

Conread position: 49-277
Cow position: chr27:20135375-20135603 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 153
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 121, 24

Conread position: 49-301
Cow position: chr27:707583-707332 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 170
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 123, 14

Conread position: 49-679
Cow position: chr27:525783-525150 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 403
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 254, 17

Conread position: 50-490
Cow position: chr27:29796780-29797224 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 285
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 31, 23

Conread position: 51-515
Cow position: chr27:20549063-20549534 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 293
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 121, 22

Conread position: 52-490
Cow position: chr27:30418288-30417857 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 279
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 118, 21

Conread position: 59-301
Cow position: chr27:22179171-22179409 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 162
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 111, 14

Conread position: 59-316
Cow position: chr27:1088853-1088599 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 174
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 173, 15

Conread position: 61-303
Cow position: chr27:31343512-31343284 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 168
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 12, 0

Conread position: 61-563
Cow position: chr27:1654651-1655154 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 319
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 96, 12

Conread position: 61-563
Cow position: chr27:23079638-23080141 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 320
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 109, 12

Conread position: 62-302
Cow position: chr27:21407934-21408173 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 159
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 211, 13

Conread position: 67-301
Cow position: chr27:25964387-25964154 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 167
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 165, 102

Conread position: 67-516
Cow position: chr27:7958225-7958678 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 289
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 79, 119

Conread position: 69-369
Cow position: chr27:16303468-16303762 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 204
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 205, 82

Conread position: 69-620
Cow position: chr27:11603446-11602909 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 349
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 163, 83

Conread position: 82-278
Cow position: chr27:18528719-18528523 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 47, 38

Conread position: 82-282
Cow position: chr27:17340496-17340698 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 141
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 132, 0

Conread position: 82-397
Cow position: chr27:23479011-23478692 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 230
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 134, 73

Conread position: 86-502
Cow position: chr27:26087817-26087400 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 266
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 84, 78

Conread position: 88-301
Cow position: chr27:777306-777093 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 146
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 136, 46

Conread position: 88-523
Cow position: chr27:16576952-16576517 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 288
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 82, 29

Conread position: 97-301
Cow position: chr27:3729725-3729930 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 135, 73

Conread position: 97-563
Cow position: chr27:10590091-10590559 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 297
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 73, 67

Conread position: 97-673
Cow position: chr27:5830523-5829945 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 376
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 135, 20

Conread position: 98-284
Cow position: chr27:16501753-16501936 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 126, 64

Conread position: 99-489
Cow position: chr27:3989191-3988795 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 259
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 71, 65

Conread position: 100-301
Cow position: chr27:26436122-26436325 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 100-396
Cow position: chr27:11006797-11006491 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 217
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 126, 19

Conread position: 104-333
Cow position: chr27:26249874-26249646 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 128, 58

Conread position: 107-696
Cow position: chr27:14869868-14870465 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 10

Conread position: 115-695
Cow position: chr27:27057008-27056434 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 385
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 125, 62

Conread position: 119-636
Cow position: chr27:17439181-17438650 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 362
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 113, 232

Conread position: 127-679
Cow position: chr27:19014631-19015186 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 364
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 105, 133

Conread position: 130-692
Cow position: chr27:25638107-25638647 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 382
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 57, 31

Conread position: 134-647
Cow position: chr27:14270496-14269999 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 341
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 58, 11

Conread position: 135-390
Cow position: chr27:24214098-24214363 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 200
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 97, 63

Conread position: 141-688
Cow position: chr27:25361275-25361810 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 346
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 91, 21

Conread position: 142-696
Cow position: chr27:3495363-3495906 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 352
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 90, 191

Conread position: 158-476
Cow position: chr27:949839-949518 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 219
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 66, 12

Conread position: 170-542
Cow position: chr27:17469372-17469745 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 240
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 62, 129

Conread position: 170-553
Cow position: chr27:6074425-6074043 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 252
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 67, 88

Conread position: 174-295
Cow position: chr27:22208735-22208612 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 58, 102

Conread position: 175-669
Cow position: chr27:11273109-11272623 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 327
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 57, 70

Conread position: 176-394
Cow position: chr27:16407944-16408167 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 158
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 56, 99

Conread position: 180-599
Cow position: chr27:26445124-26445539 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 281
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 52, 21

Conread position: 189-696
Cow position: chr27:14350966-14351459 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 347
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 95, 48

Conread position: 216-406
Cow position: chr27:21229621-21229812 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 16, 29

Conread position: 217-514
Cow position: chr27:27605888-27606185 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 193
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 86, 114

Conread position: 234-644
Cow position: chr27:13179971-13180388 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 277
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 69, 54

Conread position: 243-593
Cow position: chr27:29373156-29372805 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 240
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 61, 6

Conread position: 250-692
Cow position: chr27:13674970-13675397 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 293
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 53, 72

Conread position: 252-683
Cow position: chr27:2882226-2882666 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 296
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 51, 155

Conread position: 264-665
Cow position: chr27:27581973-27582381 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 269
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 39, 132

Conread position: 302-641
Cow position: chr27:15761903-15761568 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 226
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 74, 115

Conread position: 302-696
Cow position: chr27:21944377-21944762 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 253
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 36, 119

Conread position: 313-655
Cow position: chr27:29046708-29047042 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 228
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 36, 84

Conread position: 332-695
Cow position: chr27:22244877-22245235 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 241
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 40, 83

Conread position: 374-693
Cow position: chr27:3531495-3531194 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 214
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 33, 41

Conread position: 379-667
Cow position: chr27:1785431-1785152 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 197
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 17, 33

Conread position: 406-635
Cow position: chr27:26831250-26831034 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 159
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 41, 113

Conread position: 433-654
Cow position: chr27:4077865-4077651 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 151
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 203, 85

Conread position: 518-673
Cow position: chr27:31369539-31369692 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 39

Conread position: 518-693
Cow position: chr27:21705145-21705323 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 16, 28

Conread position: 524-671
Cow position: chr27:16493324-16493176 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 52

Show alignments to all cow chromosomes.