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Cow genome map

           
Conread name:
           
Ss1.1-ruio02_j18.5.5
        

               
Conread position:
               
1-133
               

               
Cow position:
               
chr3:62157020-62157154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
41, 75
               

               
Conread position:
               
1-155
               

               
Cow position:
               
chr3:66281493-66281338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
18, 74
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr3:19792712-19792515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
80, 45
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr3:26993541-26993747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
41, 75
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr3:60177691-60177462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
36, 74
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr3:83289527-83289271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
40, 75
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr3:23944378-23944654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
42, 75
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr3:24352099-24352382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
43, 75
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr3:77004746-77005026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
163, 28
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr3:34952889-34953169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
42, 74
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr3:35881607-35881891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
222, 72
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr3:52725853-52725552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr3:19108983-19109287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
34, 9
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr3:33848927-33849226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
57, 51
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr3:47691390-47691680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
41, 75
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr3:51597338-51597634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
236, 58
               

               
Conread position:
               
1-303
               

               
Cow position:
               
chr3:27867072-27867378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
42, 75
               

               
Conread position:
               
1-303
               

               
Cow position:
               
chr3:59332981-59333281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
169, 74
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr3:61554095-61553798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
202, 58
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr3:14647802-14648130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
36, 22
               

               
Conread position:
               
1-339
               

               
Cow position:
               
chr3:74132361-74132022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
26, 70
               

               
Conread position:
               
1-381
               

               
Cow position:
               
chr3:77453865-77454249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
42, 28
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr3:38324476-38324067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
39, 75
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr3:65921441-65921853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
1-404
               

               
Cow position:
               
chr3:45691640-45691231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
42, 75
               

               
Conread position:
               
1-490
               

               
Cow position:
               
chr3:18410432-18409921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
42, 75
               

               
Conread position:
               
1-492
               

               
Cow position:
               
chr3:24308401-24308906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 75
               

               
Conread position:
               
1-499
               

               
Cow position:
               
chr3:52513877-52514383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 42
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr3:51478117-51478641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 414
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr3:56124987-56125523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
41, 75
               

               
Conread position:
               
1-518
               

               
Cow position:
               
chr3:8563659-8563163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
81, 17
               

               
Conread position:
               
1-563
               

               
Cow position:
               
chr3:62611176-62611729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
34, 73
               

               
Conread position:
               
1-571
               

               
Cow position:
               
chr3:60868232-60868782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
172, 66
               

               
Conread position:
               
1-631
               

               
Cow position:
               
chr3:56153706-56154326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
651
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
1-655
               

               
Cow position:
               
chr3:36238340-36238971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
667
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
27, 76
               

               
Conread position:
               
1-674
               

               
Cow position:
               
chr3:44365436-44366110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
695
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 119
               

               
Conread position:
               
1-674
               

               
Cow position:
               
chr3:64678833-64679516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
713
               

               
Alignm identity:
               
453
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
45, 75
               

               
Conread position:
               
1-675
               

               
Cow position:
               
chr3:59668006-59668693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
707
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
37, 73
               

               
Conread position:
               
1-694
               

               
Cow position:
               
chr3:76156986-76157680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
713
               

               
Alignm identity:
               
477
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 75
               

               
Conread position:
               
1-695
               

               
Cow position:
               
chr3:70519880-70519184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
725
               

               
Alignm identity:
               
490
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 69
               

               
Conread position:
               
2-137
               

               
Cow position:
               
chr3:49121131-49120994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-146
               

               
Cow position:
               
chr3:63273569-63273714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
39, 74
               

               
Conread position:
               
2-147
               

               
Cow position:
               
chr3:60254219-60254366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
40, 21
               

               
Conread position:
               
2-148
               

               
Cow position:
               
chr3:173918-174066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
40, 75
               

               
Conread position:
               
2-151
               

               
Cow position:
               
chr3:6529413-6529564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-155
               

               
Cow position:
               
chr3:34015832-34015987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
36, 68
               

               
Conread position:
               
2-158
               

               
Cow position:
               
chr3:51439465-51439304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
33, 76
               

               
Conread position:
               
2-160
               

               
Cow position:
               
chr3:6024438-6024278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-160
               

               
Cow position:
               
chr3:16657452-16657292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
41, 72
               

               
Conread position:
               
2-160
               

               
Cow position:
               
chr3:47986860-47987020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-183
               

               
Cow position:
               
chr3:72909845-72910028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-189
               

               
Cow position:
               
chr3:48963288-48963474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
155, 65
               

               
Conread position:
               
2-199
               

               
Cow position:
               
chr3:55245964-55246163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-202
               

               
Cow position:
               
chr3:22946633-22946431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
41, 60
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr3:74233494-74233694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
2-208
               

               
Cow position:
               
chr3:6897249-6897450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
2-209
               

               
Cow position:
               
chr3:40205823-40206032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
37, 74
               

               
Conread position:
               
2-209
               

               
Cow position:
               
chr3:45675357-45675148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
38, 74
               

               
Conread position:
               
2-209
               

               
Cow position:
               
chr3:54788507-54788715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
37, 77
               

               
Conread position:
               
2-211
               

               
Cow position:
               
chr3:51254819-51255029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
41, 14
               

               
Conread position:
               
2-221
               

               
Cow position:
               
chr3:61611263-61611043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
41, 60
               

               
Conread position:
               
2-222
               

               
Cow position:
               
chr3:6714495-6714717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-229
               

               
Cow position:
               
chr3:69208724-69208497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
40, 73
               

               
Conread position:
               
2-230
               

               
Cow position:
               
chr3:46135663-46135440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
33, 75
               

               
Conread position:
               
2-233
               

               
Cow position:
               
chr3:6785734-6785967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-234
               

               
Cow position:
               
chr3:39065338-39065562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
2-235
               

               
Cow position:
               
chr3:12668116-12668348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-235
               

               
Cow position:
               
chr3:32221131-32221364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
40, 65
               

               
Conread position:
               
2-235
               

               
Cow position:
               
chr3:49541787-49541553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
38, 74
               

               
Conread position:
               
2-235
               

               
Cow position:
               
chr3:61242803-61243034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
84, 65
               

               
Conread position:
               
2-242
               

               
Cow position:
               
chr3:18594184-18594425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
57, 73
               

               
Conread position:
               
2-242
               

               
Cow position:
               
chr3:61539020-61539263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
40, 67
               

               
Conread position:
               
2-242
               

               
Cow position:
               
chr3:62882935-62883177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
8, 75
               

               
Conread position:
               
2-242
               

               
Cow position:
               
chr3:76154988-76155229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
35, 21
               

               
Conread position:
               
2-247
               

               
Cow position:
               
chr3:76901513-76901755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
36, 66
               

               
Conread position:
               
2-254
               

               
Cow position:
               
chr3:62793669-62793413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
22, 75
               

               
Conread position:
               
2-257
               

               
Cow position:
               
chr3:12978885-12979141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
40, 73
               

               
Conread position:
               
2-257
               

               
Cow position:
               
chr3:30321665-30321919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
36, 74
               

               
Conread position:
               
2-257
               

               
Cow position:
               
chr3:83767666-83767923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-258
               

               
Cow position:
               
chr3:21654217-21654473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
27, 76
               

               
Conread position:
               
2-261
               

               
Cow position:
               
chr3:43566968-43567227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
34, 74
               

               
Conread position:
               
2-263
               

               
Cow position:
               
chr3:41207144-41206881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
36, 68
               

               
Conread position:
               
2-269
               

               
Cow position:
               
chr3:37982945-37982675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-270
               

               
Cow position:
               
chr3:53510126-53510410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
33, 79
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr3:56160404-56160134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
36, 68
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr3:72174885-72174607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-276
               

               
Cow position:
               
chr3:68696554-68696277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr3:6170892-6171170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr3:15570850-15571134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
35, 74
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr3:24455117-24454855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
230, 65
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr3:30938922-30939195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr3:34037389-34037667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr3:37972449-37972725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
40, 25
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr3:39214797-39215074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
29, 73
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr3:50921457-50921725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
38, 74
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr3:51603058-51603336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr3:64024619-64024343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr3:68500878-68501156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr3:75997468-75997198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
230, 38
               

               
Conread position:
               
2-280
               

               
Cow position:
               
chr3:30615520-30615240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
168, 71
               

               
Conread position:
               
2-281
               

               
Cow position:
               
chr3:19808296-19808567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
41, 14
               

               
Conread position:
               
2-281
               

               
Cow position:
               
chr3:69441802-69441527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
37, 14
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr3:68617048-68617332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
40, 18
               

               
Conread position:
               
2-283
               

               
Cow position:
               
chr3:24641593-24641868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
39, 15
               

               
Conread position:
               
2-283
               

               
Cow position:
               
chr3:34874450-34874174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
37, 13
               

               
Conread position:
               
2-283
               

               
Cow position:
               
chr3:46062757-46063036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
168, 40
               

               
Conread position:
               
2-283
               

               
Cow position:
               
chr3:57835219-57834942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
29, 74
               

               
Conread position:
               
2-283
               

               
Cow position:
               
chr3:63219349-63219626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
45, 73
               

               
Conread position:
               
2-283
               

               
Cow position:
               
chr3:67430472-67430201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-283
               

               
Cow position:
               
chr3:79978773-79978490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-286
               

               
Cow position:
               
chr3:27547018-27546728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
44, 77
               

               
Conread position:
               
2-286
               

               
Cow position:
               
chr3:49336612-49336894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
193, 44
               

               
Conread position:
               
2-286
               

               
Cow position:
               
chr3:61955513-61955808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
38, 74
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr3:56524688-56524402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-288
               

               
Cow position:
               
chr3:19216321-19216605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
170, 71
               

               
Conread position:
               
2-289
               

               
Cow position:
               
chr3:21111857-21112140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
33, 75
               

               
Conread position:
               
2-292
               

               
Cow position:
               
chr3:9665532-9665241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-293
               

               
Cow position:
               
chr3:13683937-13684233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 75
               

               
Conread position:
               
2-296
               

               
Cow position:
               
chr3:11278826-11279111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
148, 64
               

               
Conread position:
               
2-296
               

               
Cow position:
               
chr3:22220560-22220853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-296
               

               
Cow position:
               
chr3:47125108-47125399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
46, 73
               

               
Conread position:
               
2-297
               

               
Cow position:
               
chr3:34392864-34392566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr3:12750317-12750605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr3:16620334-16620035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
12, 75
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr3:26567195-26567493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr3:52690157-52690441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
18, 12
               

               
Conread position:
               
2-299
               

               
Cow position:
               
chr3:11018863-11019166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
40, 62
               

               
Conread position:
               
2-299
               

               
Cow position:
               
chr3:14017743-14018033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
60, 72
               

               
Conread position:
               
2-299
               

               
Cow position:
               
chr3:18996627-18996937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
33, 71
               

               
Conread position:
               
2-299
               

               
Cow position:
               
chr3:43658461-43658168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
40, 77
               

               
Conread position:
               
2-299
               

               
Cow position:
               
chr3:80759632-80759929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
157, 25
               

               
Conread position:
               
2-300
               

               
Cow position:
               
chr3:68402034-68401720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
41, 21
               

               
Conread position:
               
2-300
               

               
Cow position:
               
chr3:76932483-76932183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
20, 68
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr3:322444-322136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
38, 73
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr3:1516240-1515941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
170, 71
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr3:2024426-2024724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
168, 160
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr3:4031168-4031470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr3:6962389-6962696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
34, 75
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr3:11789385-11789685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
40, 67
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr3:13035075-13034773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
38, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr3:15052673-15052373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
82, 40
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr3:15379790-15379489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
37, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr3:15557203-15557509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr3:15655898-15655598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
47, 76
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr3:16156937-16157239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
40, 21
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr3:16752951-16752665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
41, 11
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr3:19978179-19977877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr3:21082281-21082577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
38, 68
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr3:21779357-21779055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr3:24638822-24639131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr3:25690992-25691285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
36, 11
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr3:26750678-26750378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
44, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr3:28922416-28922718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr3:29311564-29311868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr3:29573661-29573359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr3:30609712-30610014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr3:30908700-30908399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
37, 73
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr3:32769231-32769533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr3:35077408-35077107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
29, 76
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr3:36170540-36170245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr3:37628303-37628605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
40, 67
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr3:37909736-37909437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
11, 23
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr3:39232132-39232434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr3:40686932-40687226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
40, 99
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr3:46345755-46345473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr3:49429232-49428932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
7, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr3:50204996-50205295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr3:52651533-52651233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
40, 31
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr3:52652927-52652624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
29, 77
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr3:55461245-55460947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
38, 72
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr3:56697258-56697560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr3:60184747-60184448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
168, 71
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr3:61278167-61278469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
40, 73
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr3:66028805-66029104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
160, 27
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr3:67745351-67745057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
36, 70
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr3:70074683-70074383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr3:70913843-70913539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr3:72105037-72104734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
40, 77
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr3:73936781-73936479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr3:74700395-74700096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr3:75157936-75157637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
167, 65
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr3:77366286-77365997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
210, 42
               

               
Conread position:
               
2-302
               

               
Cow position:
               
chr3:1299508-1299811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-302
               

               
Cow position:
               
chr3:31933917-31933622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
40, 77
               

               
Conread position:
               
2-302
               

               
Cow position:
               
chr3:42603077-42603377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
37, 75
               

               
Conread position:
               
2-302
               

               
Cow position:
               
chr3:49297159-49297459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:2866234-2865930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:5445407-5445103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:5887304-5887601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:5989143-5988838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
18, 75
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:7245685-7245384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
168, 64
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:9290023-9290310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
42, 67
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:11542772-11543071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
42, 67
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:13248600-13248296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:16226295-16226599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:17864850-17865153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:19753314-19753011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
44, 14
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:19797684-19797378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
36, 69
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:20379298-20378995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:20519492-20519794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
40, 14
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:20795714-20796017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:21100224-21100527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
37, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:21178836-21178532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:21593703-21594005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
40, 62
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:22490043-22490347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
40, 76
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:23010772-23011076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:24585808-24585504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
38, 75
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:26722391-26722095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
40, 24
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:26742453-26742152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
151, 71
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:26801505-26801809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:26974215-26973911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
40, 18
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:27213082-27213389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
36, 65
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:31120406-31120104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
37, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:31288127-31287847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
156, 22
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:32619591-32619288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:35918980-35919284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:37020803-37020499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
37, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:38096321-38096625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:38869986-38870290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:39921526-39921224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:41057380-41057684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:42507793-42507488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:42846764-42847068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
40, 76
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:43084643-43084942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:44536552-44536252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
209, 72
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:45097660-45097964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:47272458-47272155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
37, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:48273205-48273510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:48599949-48600260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:48603682-48603980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
37, 73
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:49389678-49389374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:49463147-49462846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
54, 40
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:49564437-49564741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:51256359-51256663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:53519211-53519504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
168, 40
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:54608592-54608288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
40, 76
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:56148716-56149011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
230, 71
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:56336260-56335957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:57481325-57481033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:58726918-58726624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
41, 67
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:60932686-60932988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:64376295-64375995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:64655625-64655928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:65536535-65536839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:67625026-67624723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
37, 73
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:68889152-68888848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:69345573-69345269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
38, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:70289364-70289070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
29, 73
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:72390339-72390639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:72633493-72633796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:73450893-73450589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:73956248-73956551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
42, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:77472580-77472276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
36, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:78625687-78625979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
41, 67
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr3:82409233-82409528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
221, 35
               

               
Conread position:
               
2-304
               

               
Cow position:
               
chr3:4135561-4135254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-305
               

               
Cow position:
               
chr3:72863628-72863322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
40, 75
               

               
Conread position:
               
2-306
               

               
Cow position:
               
chr3:31422701-31422398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
41, 60
               

               
Conread position:
               
2-307
               

               
Cow position:
               
chr3:63202654-63202952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
36, 27
               

               
Conread position:
               
2-317
               

               
Cow position:
               
chr3:52257096-52256781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
41, 75
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr3:49732363-49732037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-335
               

               
Cow position:
               
chr3:11944496-11944838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
13, 63
               

               
Conread position:
               
2-336
               

               
Cow position:
               
chr3:80261425-80261103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
41, 76
               

               
Conread position:
               
2-349
               

               
Cow position:
               
chr3:58025615-58025262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
2-367
               

               
Cow position:
               
chr3:25997680-25997321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
143, 64
               

               
Conread position:
               
2-368
               

               
Cow position:
               
chr3:75839438-75839084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
36, 26
               

               
Conread position:
               
2-370
               

               
Cow position:
               
chr3:56302386-56302012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
37, 74
               

               
Conread position:
               
2-370
               

               
Cow position:
               
chr3:57531551-57531922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
20, 77
               

               
Conread position:
               
2-388
               

               
Cow position:
               
chr3:62754823-62755211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
41, 60
               

               
Conread position:
               
2-390
               

               
Cow position:
               
chr3:18352942-18352539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
35, 75
               

               
Conread position:
               
2-390
               

               
Cow position:
               
chr3:53047379-53046989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
47, 72
               

               
Conread position:
               
2-390
               

               
Cow position:
               
chr3:59465429-59465836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
35, 12
               

               
Conread position:
               
2-390
               

               
Cow position:
               
chr3:65276729-65276340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
40, 83
               

               
Conread position:
               
2-396
               

               
Cow position:
               
chr3:13471328-13470925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
41, 12
               

               
Conread position:
               
2-397
               

               
Cow position:
               
chr3:43196509-43196919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
11, 75
               

               
Conread position:
               
2-405
               

               
Cow position:
               
chr3:24484614-24484214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
54, 42
               

               
Conread position:
               
2-449
               

               
Cow position:
               
chr3:57900349-57900818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
42, 177
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr3:56205960-56206414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
40, 76
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr3:1483443-1483908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
194, 71
               

               
Conread position:
               
2-460
               

               
Cow position:
               
chr3:17937595-17937131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
121, 65
               

               
Conread position:
               
2-470
               

               
Cow position:
               
chr3:1263885-1264368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 125
               

               
Conread position:
               
2-470
               

               
Cow position:
               
chr3:16114826-16115303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
212, 43
               

               
Conread position:
               
2-470
               

               
Cow position:
               
chr3:31383571-31383097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
36, 74
               

               
Conread position:
               
2-474
               

               
Cow position:
               
chr3:8923022-8923497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
41, 11
               

               
Conread position:
               
2-477
               

               
Cow position:
               
chr3:63176762-63177251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
40, 95
               

               
Conread position:
               
2-479
               

               
Cow position:
               
chr3:22918939-22919428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
40, 199
               

               
Conread position:
               
2-479
               

               
Cow position:
               
chr3:43189856-43189357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
40, 78
               

               
Conread position:
               
2-479
               

               
Cow position:
               
chr3:45608270-45608754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
41, 68
               

               
Conread position:
               
2-488
               

               
Cow position:
               
chr3:52149865-52149368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-489
               

               
Cow position:
               
chr3:6442489-6442984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
35, 61
               

               
Conread position:
               
2-489
               

               
Cow position:
               
chr3:14438567-14438072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
40, 14
               

               
Conread position:
               
2-489
               

               
Cow position:
               
chr3:22724363-22723872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-489
               

               
Cow position:
               
chr3:23735851-23735353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
45, 73
               

               
Conread position:
               
2-489
               

               
Cow position:
               
chr3:30567534-30568032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-489
               

               
Cow position:
               
chr3:35612568-35613060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-489
               

               
Cow position:
               
chr3:35884695-35884204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
38, 30
               

               
Conread position:
               
2-489
               

               
Cow position:
               
chr3:36874640-36874145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-489
               

               
Cow position:
               
chr3:40284928-40284431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-489
               

               
Cow position:
               
chr3:54653739-54653242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-489
               

               
Cow position:
               
chr3:59603222-59603716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
38, 73
               

               
Conread position:
               
2-489
               

               
Cow position:
               
chr3:59864900-59865397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-489
               

               
Cow position:
               
chr3:66623606-66624103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-489
               

               
Cow position:
               
chr3:69930416-69929921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-490
               

               
Cow position:
               
chr3:5474960-5475452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-490
               

               
Cow position:
               
chr3:7155386-7154888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-490
               

               
Cow position:
               
chr3:12932187-12932685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
38, 74
               

               
Conread position:
               
2-490
               

               
Cow position:
               
chr3:14212811-14213301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-490
               

               
Cow position:
               
chr3:14923072-14923569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-490
               

               
Cow position:
               
chr3:18862861-18863357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
170, 71
               

               
Conread position:
               
2-490
               

               
Cow position:
               
chr3:19692074-19691576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
38, 74
               

               
Conread position:
               
2-490
               

               
Cow position:
               
chr3:20475928-20476417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
170, 14
               

               
Conread position:
               
2-490
               

               
Cow position:
               
chr3:32356171-32356669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-490
               

               
Cow position:
               
chr3:37894252-37894742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
40, 61
               

               
Conread position:
               
2-490
               

               
Cow position:
               
chr3:43525319-43524821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-490
               

               
Cow position:
               
chr3:47078192-47077694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-490
               

               
Cow position:
               
chr3:65178792-65179292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
35, 74
               

               
Conread position:
               
2-490
               

               
Cow position:
               
chr3:68717290-68716791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-490
               

               
Cow position:
               
chr3:74060889-74061386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
40, 14
               

               
Conread position:
               
2-490
               

               
Cow position:
               
chr3:75771714-75771216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-490
               

               
Cow position:
               
chr3:78520469-78520964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-491
               

               
Cow position:
               
chr3:302642-303141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-491
               

               
Cow position:
               
chr3:579593-580099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-491
               

               
Cow position:
               
chr3:2707454-2706974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-491
               

               
Cow position:
               
chr3:13311581-13311081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-491
               

               
Cow position:
               
chr3:13360867-13361366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-491
               

               
Cow position:
               
chr3:14864303-14864790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-491
               

               
Cow position:
               
chr3:18111723-18111233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
44, 14
               

               
Conread position:
               
2-491
               

               
Cow position:
               
chr3:18875262-18874766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-491
               

               
Cow position:
               
chr3:19883879-19884373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-491
               

               
Cow position:
               
chr3:36121596-36122094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-491
               

               
Cow position:
               
chr3:46683254-46683753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-491
               

               
Cow position:
               
chr3:53879845-53879346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-491
               

               
Cow position:
               
chr3:66887777-66887273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-491
               

               
Cow position:
               
chr3:75038421-75037922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-491
               

               
Cow position:
               
chr3:79668531-79669030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-493
               

               
Cow position:
               
chr3:3837186-3836682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
2-493
               

               
Cow position:
               
chr3:13517907-13517402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
16, 79
               

               
Conread position:
               
2-493
               

               
Cow position:
               
chr3:15305959-15306459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
41, 27
               

               
Conread position:
               
2-493
               

               
Cow position:
               
chr3:35109647-35110148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-494
               

               
Cow position:
               
chr3:12872522-12873018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
40, 76
               

               
Conread position:
               
2-494
               

               
Cow position:
               
chr3:14280097-14280598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
39, 74
               

               
Conread position:
               
2-495
               

               
Cow position:
               
chr3:73763213-73762704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
230, 65
               

               
Conread position:
               
2-496
               

               
Cow position:
               
chr3:18184332-18184824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
37, 74
               

               
Conread position:
               
2-496
               

               
Cow position:
               
chr3:51032598-51033100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-498
               

               
Cow position:
               
chr3:40344645-40345158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
32, 18
               

               
Conread position:
               
2-499
               

               
Cow position:
               
chr3:14717067-14717572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
40, 11
               

               
Conread position:
               
2-499
               

               
Cow position:
               
chr3:48620574-48621073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
222, 40
               

               
Conread position:
               
2-500
               

               
Cow position:
               
chr3:18246163-18245661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
40, 61
               

               
Conread position:
               
2-501
               

               
Cow position:
               
chr3:66043157-66042671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 74
               

               
Conread position:
               
2-501
               

               
Cow position:
               
chr3:66846989-66846501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
36, 21
               

               
Conread position:
               
2-515
               

               
Cow position:
               
chr3:18460265-18459745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
58, 72
               

               
Conread position:
               
2-516
               

               
Cow position:
               
chr3:2627573-2628094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
40, 67
               

               
Conread position:
               
2-516
               

               
Cow position:
               
chr3:3884770-3884251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
40, 77
               

               
Conread position:
               
2-516
               

               
Cow position:
               
chr3:18758986-18758461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
39, 100
               

               
Conread position:
               
2-516
               

               
Cow position:
               
chr3:20342448-20342974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
13, 77
               

               
Conread position:
               
2-516
               

               
Cow position:
               
chr3:21303172-21302654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
83, 65
               

               
Conread position:
               
2-516
               

               
Cow position:
               
chr3:33633623-33633111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
41, 75
               

               
Conread position:
               
2-516
               

               
Cow position:
               
chr3:38346458-38346977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
36, 11
               

               
Conread position:
               
2-516
               

               
Cow position:
               
chr3:58078193-58077673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
37, 73
               

               
Conread position:
               
2-516
               

               
Cow position:
               
chr3:62515540-62516059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
17, 9
               

               
Conread position:
               
2-516
               

               
Cow position:
               
chr3:66610577-66610062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
235, 40
               

               
Conread position:
               
2-542
               

               
Cow position:
               
chr3:37009325-37008794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-561
               

               
Cow position:
               
chr3:10244080-10244643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-562
               

               
Cow position:
               
chr3:31418951-31419517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
40, 11
               

               
Conread position:
               
2-562
               

               
Cow position:
               
chr3:70730720-70731284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr3:1034509-1035073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
40, 22
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr3:1437985-1438548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
40, 72
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr3:1622521-1623086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr3:2075201-2075766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr3:2572948-2573513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
38, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr3:2834118-2833553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr3:2922051-2922615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr3:3372765-3372200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr3:6383923-6384485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
40, 73
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr3:6838450-6839017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr3:6884566-6885131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr3:8330696-8331262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr3:10449049-10448485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
40, 67
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr3:11417967-11418532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr3:12797639-12797074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
40, 63
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr3:12982467-12981903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr3:15416887-15417452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
38, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr3:18052501-18051936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr3:19881470-19882035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr3:23598613-23598053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr3:24265619-24266183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
40, 73
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr3:24442686-24442123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
39, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr3:26891911-26892476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr3:27687942-27687377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr3:29461764-29461199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr3:30753004-30753568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
40, 64
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr3:32412146-32411581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr3:34503715-34503153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 71
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr3:35043580-35044145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr3:35342446-35341881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr3:36417160-36417725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr3:36861686-36861125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr3:37150986-37150423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr3:38747801-38748367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr3:40049309-40049871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr3:41018890-41018325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr3:42186890-42187472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr3:42976894-42976330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr3:44255178-44254613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
79, 40
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr3:44927234-44927799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr3:45748675-45749240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr3:45947105-45946540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
37, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr3:46260789-46261355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr3:49605022-49604462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
40, 60
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr3:49610790-49610230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
37, 68
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr3:49976108-49975544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr3:50217412-50217974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr3:52045599-52045034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr3:56297805-56298364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr3:56484834-56484269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
44, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr3:58336727-58337285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr3:64215991-64216560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr3:64293941-64294494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr3:65085354-65085918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr3:65989330-65989891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
237, 71
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr3:66968458-66967893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr3:68870330-68869770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
40, 60
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr3:73211249-73211801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr3:76864852-76865417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr3:80741291-80741856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr3:81058106-81057541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr3:81374831-81374267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-564
               

               
Cow position:
               
chr3:40231182-40231747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-564
               

               
Cow position:
               
chr3:76926830-76927383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
40, 76
               

               
Conread position:
               
2-586
               

               
Cow position:
               
chr3:66829528-66828941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-592
               

               
Cow position:
               
chr3:67044847-67044255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-593
               

               
Cow position:
               
chr3:200134-200720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 40
               

               
Conread position:
               
2-593
               

               
Cow position:
               
chr3:48269115-48269710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
34, 68
               

               
Conread position:
               
2-593
               

               
Cow position:
               
chr3:60388904-60389479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-598
               

               
Cow position:
               
chr3:14453079-14453678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
168, 25
               

               
Conread position:
               
2-599
               

               
Cow position:
               
chr3:2507221-2506628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
39, 74
               

               
Conread position:
               
2-599
               

               
Cow position:
               
chr3:43528981-43528388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
39, 74
               

               
Conread position:
               
2-604
               

               
Cow position:
               
chr3:19830742-19830137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
37, 54
               

               
Conread position:
               
2-620
               

               
Cow position:
               
chr3:55324141-55323514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
36, 72
               

               
Conread position:
               
2-635
               

               
Cow position:
               
chr3:56914307-56914932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-636
               

               
Cow position:
               
chr3:39234101-39234715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
649
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 153
               

               
Conread position:
               
2-656
               

               
Cow position:
               
chr3:15657768-15658397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
673
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 40
               

               
Conread position:
               
2-656
               

               
Cow position:
               
chr3:43045322-43045964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
673
               

               
Alignm identity:
               
469
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 74
               

               
Conread position:
               
2-666
               

               
Cow position:
               
chr3:82513440-82514091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
691
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
36, 153
               

               
Conread position:
               
2-667
               

               
Cow position:
               
chr3:33503803-33503136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
696
               

               
Alignm identity:
               
472
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 126
               

               
Conread position:
               
2-667
               

               
Cow position:
               
chr3:65204190-65203532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
686
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
36, 70
               

               
Conread position:
               
2-678
               

               
Cow position:
               
chr3:84937098-84936429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
698
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
41, 75
               

               
Conread position:
               
2-679
               

               
Cow position:
               
chr3:16883904-16883243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
688
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 40
               

               
Conread position:
               
2-679
               

               
Cow position:
               
chr3:57590750-57591406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
687
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 71
               

               
Conread position:
               
2-682
               

               
Cow position:
               
chr3:10038845-10039524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
710
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 67
               

               
Conread position:
               
2-687
               

               
Cow position:
               
chr3:49911755-49912410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
704
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
42, 58
               

               
Conread position:
               
2-688
               

               
Cow position:
               
chr3:55129771-55130463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
709
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-690
               

               
Cow position:
               
chr3:76835749-76836397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
696
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-692
               

               
Cow position:
               
chr3:76354872-76355557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
721
               

               
Alignm identity:
               
490
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 38
               

               
Conread position:
               
2-695
               

               
Cow position:
               
chr3:27673621-27672929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
14, 26
               

               
Conread position:
               
2-696
               

               
Cow position:
               
chr3:60279169-60278477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
715
               

               
Alignm identity:
               
460
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
3-160
               

               
Cow position:
               
chr3:79596037-79596196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
39, 73
               

               
Conread position:
               
3-181
               

               
Cow position:
               
chr3:16886960-16886780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
40, 73
               

               
Conread position:
               
3-209
               

               
Cow position:
               
chr3:20781039-20780831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
39, 75
               

               
Conread position:
               
3-211
               

               
Cow position:
               
chr3:16172144-16171936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
40, 73
               

               
Conread position:
               
3-235
               

               
Cow position:
               
chr3:71229997-71229763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
38, 75
               

               
Conread position:
               
3-255
               

               
Cow position:
               
chr3:55190453-55190200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
36, 73
               

               
Conread position:
               
3-264
               

               
Cow position:
               
chr3:28435280-28435022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
167, 64
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr3:10046629-10046895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
219, 26
               

               
Conread position:
               
3-283
               

               
Cow position:
               
chr3:43662666-43662937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
221, 30
               

               
Conread position:
               
3-286
               

               
Cow position:
               
chr3:74753825-74754103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
145, 63
               

               
Conread position:
               
3-301
               

               
Cow position:
               
chr3:7677920-7678216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
39, 67
               

               
Conread position:
               
3-301
               

               
Cow position:
               
chr3:43008176-43007875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
33, 63
               

               
Conread position:
               
3-301
               

               
Cow position:
               
chr3:47209668-47209370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
30, 73
               

               
Conread position:
               
3-301
               

               
Cow position:
               
chr3:51235082-51234782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
37, 72
               

               
Conread position:
               
3-303
               

               
Cow position:
               
chr3:35509619-35509924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
35, 166
               

               
Conread position:
               
3-303
               

               
Cow position:
               
chr3:73945345-73945035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
16, 74
               

               
Conread position:
               
3-303
               

               
Cow position:
               
chr3:74391489-74391184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
35, 67
               

               
Conread position:
               
3-349
               

               
Cow position:
               
chr3:16005380-16005023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
40, 80
               

               
Conread position:
               
3-369
               

               
Cow position:
               
chr3:10440818-10441193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
115, 39
               

               
Conread position:
               
3-386
               

               
Cow position:
               
chr3:16739094-16739484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
39, 75
               

               
Conread position:
               
3-500
               

               
Cow position:
               
chr3:2295146-2295642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
34, 66
               

               
Conread position:
               
3-516
               

               
Cow position:
               
chr3:47697220-47697756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
37, 66
               

               
Conread position:
               
3-516
               

               
Cow position:
               
chr3:51490720-51491240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
146, 70
               

               
Conread position:
               
3-516
               

               
Cow position:
               
chr3:74140469-74139927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
40, 73
               

               
Conread position:
               
3-564
               

               
Cow position:
               
chr3:58953551-58954116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
34, 73
               

               
Conread position:
               
3-664
               

               
Cow position:
               
chr3:83948156-83948821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
691
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
11, 181
               

               
Conread position:
               
3-673
               

               
Cow position:
               
chr3:53158785-53159469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
701
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
37, 73
               

               
Conread position:
               
3-679
               

               
Cow position:
               
chr3:62911448-62910749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
709
               

               
Alignm identity:
               
476
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 73
               

               
Conread position:
               
3-696
               

               
Cow position:
               
chr3:43671199-43670519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
713
               

               
Alignm identity:
               
467
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 76
               

               
Conread position:
               
3-696
               

               
Cow position:
               
chr3:53568218-53568903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
711
               

               
Alignm identity:
               
481
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 70
               

               
Conread position:
               
4-285
               

               
Cow position:
               
chr3:19469945-19470225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
38, 12
               

               
Conread position:
               
4-297
               

               
Cow position:
               
chr3:13352700-13352405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
35, 72
               

               
Conread position:
               
4-297
               

               
Cow position:
               
chr3:14748328-14748034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
35, 72
               

               
Conread position:
               
4-297
               

               
Cow position:
               
chr3:70469808-70469519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
38, 72
               

               
Conread position:
               
4-298
               

               
Cow position:
               
chr3:7740002-7739713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
39, 75
               

               
Conread position:
               
4-303
               

               
Cow position:
               
chr3:65473849-65474152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
38, 163
               

               
Conread position:
               
4-303
               

               
Cow position:
               
chr3:76139802-76139507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
39, 72
               

               
Conread position:
               
4-304
               

               
Cow position:
               
chr3:65877444-65877745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
36, 66
               

               
Conread position:
               
4-390
               

               
Cow position:
               
chr3:3984547-3984933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
38, 163
               

               
Conread position:
               
4-696
               

               
Cow position:
               
chr3:58255723-58256396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
715
               

               
Alignm identity:
               
471
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 19
               

               
Conread position:
               
5-301
               

               
Cow position:
               
chr3:33469242-33468945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
30, 70
               

               
Conread position:
               
5-471
               

               
Cow position:
               
chr3:73459479-73459954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
33, 71
               

               
Conread position:
               
5-515
               

               
Cow position:
               
chr3:23169811-23169295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
44, 70
               

               
Conread position:
               
6-277
               

               
Cow position:
               
chr3:19942307-19942581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
36, 70
               

               
Conread position:
               
6-281
               

               
Cow position:
               
chr3:13275853-13275575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
37, 70
               

               
Conread position:
               
6-285
               

               
Cow position:
               
chr3:2117878-2118159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
36, 62
               

               
Conread position:
               
6-300
               

               
Cow position:
               
chr3:3301053-3301346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
33, 70
               

               
Conread position:
               
6-301
               

               
Cow position:
               
chr3:634221-633923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
38, 21
               

               
Conread position:
               
6-301
               

               
Cow position:
               
chr3:78546841-78546547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
32, 54
               

               
Conread position:
               
6-303
               

               
Cow position:
               
chr3:14451674-14451374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
36, 70
               

               
Conread position:
               
6-303
               

               
Cow position:
               
chr3:19959019-19959319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
36, 70
               

               
Conread position:
               
6-303
               

               
Cow position:
               
chr3:22235070-22234767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
37, 58
               

               
Conread position:
               
6-303
               

               
Cow position:
               
chr3:49907608-49907310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
36, 57
               

               
Conread position:
               
6-303
               

               
Cow position:
               
chr3:56644906-56644606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
36, 70
               

               
Conread position:
               
6-563
               

               
Cow position:
               
chr3:24432802-24433362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
35, 70
               

               
Conread position:
               
7-289
               

               
Cow position:
               
chr3:15663041-15662756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
35, 69
               

               
Conread position:
               
7-393
               

               
Cow position:
               
chr3:11509438-11509042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
35, 70
               

               
Conread position:
               
7-500
               

               
Cow position:
               
chr3:28675244-28675749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
14, 70
               

               
Conread position:
               
7-563
               

               
Cow position:
               
chr3:28669267-28668703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
35, 69
               

               
Conread position:
               
8-281
               

               
Cow position:
               
chr3:11410848-11410572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
34, 69
               

               
Conread position:
               
8-301
               

               
Cow position:
               
chr3:5420614-5420321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
224, 68
               

               
Conread position:
               
8-301
               

               
Cow position:
               
chr3:24872027-24872311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
34, 68
               

               
Conread position:
               
9-515
               

               
Cow position:
               
chr3:80054275-80053759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
161, 25
               

               
Conread position:
               
10-268
               

               
Cow position:
               
chr3:56699211-56698949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
34, 66
               

               
Conread position:
               
10-294
               

               
Cow position:
               
chr3:84315693-84315983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
22, 66
               

               
Conread position:
               
10-296
               

               
Cow position:
               
chr3:27090769-27090487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
28, 66
               

               
Conread position:
               
10-297
               

               
Cow position:
               
chr3:43102931-43103215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
33, 68
               

               
Conread position:
               
10-653
               

               
Cow position:
               
chr3:77295883-77296517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
664
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 67
               

               
Conread position:
               
11-192
               

               
Cow position:
               
chr3:42050651-42050468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
30, 49
               

               
Conread position:
               
11-369
               

               
Cow position:
               
chr3:83911991-83912346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
31, 65
               

               
Conread position:
               
11-379
               

               
Cow position:
               
chr3:60172801-60172427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 23
               

               
Conread position:
               
12-563
               

               
Cow position:
               
chr3:14680512-14681067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
31, 64
               

               
Conread position:
               
14-301
               

               
Cow position:
               
chr3:77187713-77188004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
6, 63
               

               
Conread position:
               
14-488
               

               
Cow position:
               
chr3:29328501-29328017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
29, 62
               

               
Conread position:
               
15-257
               

               
Cow position:
               
chr3:64171666-64171906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
216, 58
               

               
Conread position:
               
15-301
               

               
Cow position:
               
chr3:28871739-28871450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
27, 61
               

               
Conread position:
               
15-495
               

               
Cow position:
               
chr3:47468961-47468471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
24, 61
               

               
Conread position:
               
15-692
               

               
Cow position:
               
chr3:7984663-7983995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
700
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
22, 60
               

               
Conread position:
               
16-301
               

               
Cow position:
               
chr3:32879178-32878890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
20, 64
               

               
Conread position:
               
18-293
               

               
Cow position:
               
chr3:59390785-59390517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
23, 57
               

               
Conread position:
               
19-299
               

               
Cow position:
               
chr3:45881171-45881460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
23, 57
               

               
Conread position:
               
19-301
               

               
Cow position:
               
chr3:31224723-31225009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
23, 57
               

               
Conread position:
               
19-301
               

               
Cow position:
               
chr3:84199208-84199492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
22, 13
               

               
Conread position:
               
19-302
               

               
Cow position:
               
chr3:11819228-11819513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
23, 57
               

               
Conread position:
               
19-563
               

               
Cow position:
               
chr3:24558138-24557590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
19, 57
               

               
Conread position:
               
19-696
               

               
Cow position:
               
chr3:49160929-49160246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
703
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
213, 23
               

               
Conread position:
               
20-297
               

               
Cow position:
               
chr3:25057102-25057382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
22, 58
               

               
Conread position:
               
21-280
               

               
Cow position:
               
chr3:31022114-31022374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
22, 55
               

               
Conread position:
               
21-301
               

               
Cow position:
               
chr3:13886554-13886839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
26, 58
               

               
Conread position:
               
21-514
               

               
Cow position:
               
chr3:50344908-50344416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 55
               

               
Conread position:
               
22-238
               

               
Cow position:
               
chr3:1256325-1256536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
22-460
               

               
Cow position:
               
chr3:53414454-53414900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
20, 46
               

               
Conread position:
               
22-513
               

               
Cow position:
               
chr3:59691184-59691677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
20, 54
               

               
Conread position:
               
22-671
               

               
Cow position:
               
chr3:8002630-8001975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
675
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 54
               

               
Conread position:
               
23-301
               

               
Cow position:
               
chr3:50111613-50111334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
19, 34
               

               
Conread position:
               
28-303
               

               
Cow position:
               
chr3:471158-470887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
142, 14
               

               
Conread position:
               
28-490
               

               
Cow position:
               
chr3:11122723-11123195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
14, 48
               

               
Conread position:
               
28-514
               

               
Cow position:
               
chr3:41315560-41316058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
12, 48
               

               
Conread position:
               
28-637
               

               
Cow position:
               
chr3:77623642-77624256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
15, 48
               

               
Conread position:
               
29-652
               

               
Cow position:
               
chr3:40741132-40740541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
9, 38
               

               
Conread position:
               
29-682
               

               
Cow position:
               
chr3:39945505-39944835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
693
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
9, 47
               

               
Conread position:
               
30-301
               

               
Cow position:
               
chr3:25802622-25802891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
14, 46
               

               
Conread position:
               
30-512
               

               
Cow position:
               
chr3:27580321-27579838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 38
               

               
Conread position:
               
35-637
               

               
Cow position:
               
chr3:90221-90789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
75, 38
               

               
Conread position:
               
35-696
               

               
Cow position:
               
chr3:20452764-20453406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
676
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 7
               

               
Conread position:
               
36-301
               

               
Cow position:
               
chr3:54506068-54506336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
45, 128
               

               
Conread position:
               
36-303
               

               
Cow position:
               
chr3:22739460-22739191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
57, 29
               

               
Conread position:
               
36-368
               

               
Cow position:
               
chr3:78204410-78204751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
131, 37
               

               
Conread position:
               
36-556
               

               
Cow position:
               
chr3:10854566-10854063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 7
               

               
Conread position:
               
36-563
               

               
Cow position:
               
chr3:14145123-14144595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
136, 37
               

               
Conread position:
               
36-569
               

               
Cow position:
               
chr3:82342689-82342161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
107, 36
               

               
Conread position:
               
36-655
               

               
Cow position:
               
chr3:21969398-21970044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
655
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
126, 37
               

               
Conread position:
               
36-696
               

               
Cow position:
               
chr3:69496474-69495819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
678
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 37
               

               
Conread position:
               
37-258
               

               
Cow position:
               
chr3:71235478-71235261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
193, 23
               

               
Conread position:
               
37-263
               

               
Cow position:
               
chr3:19137031-19136805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
133, 36
               

               
Conread position:
               
37-281
               

               
Cow position:
               
chr3:36128523-36128766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
195, 29
               

               
Conread position:
               
37-283
               

               
Cow position:
               
chr3:1750025-1749779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
120, 29
               

               
Conread position:
               
37-283
               

               
Cow position:
               
chr3:45342232-45342477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
187, 36
               

               
Conread position:
               
37-283
               

               
Cow position:
               
chr3:62999994-62999747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
44, 39
               

               
Conread position:
               
37-289
               

               
Cow position:
               
chr3:76610222-76610469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
185, 23
               

               
Conread position:
               
37-301
               

               
Cow position:
               
chr3:83443355-83443088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
44, 37
               

               
Conread position:
               
37-303
               

               
Cow position:
               
chr3:22867515-22867253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
199, 36
               

               
Conread position:
               
37-303
               

               
Cow position:
               
chr3:28471833-28472099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
135, 36
               

               
Conread position:
               
37-303
               

               
Cow position:
               
chr3:51338718-51338452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
135, 36
               

               
Conread position:
               
37-349
               

               
Cow position:
               
chr3:73687115-73686794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
79, 36
               

               
Conread position:
               
37-396
               

               
Cow position:
               
chr3:31749125-31749484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
36, 22
               

               
Conread position:
               
37-473
               

               
Cow position:
               
chr3:34556930-34556488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
133, 12
               

               
Conread position:
               
37-491
               

               
Cow position:
               
chr3:29282212-29282673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
36, 21
               

               
Conread position:
               
37-493
               

               
Cow position:
               
chr3:66134374-66133905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
195, 36
               

               
Conread position:
               
37-495
               

               
Cow position:
               
chr3:6079043-6078580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
117, 44
               

               
Conread position:
               
37-514
               

               
Cow position:
               
chr3:48362379-48362857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
133, 36
               

               
Conread position:
               
37-516
               

               
Cow position:
               
chr3:6799711-6799224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
201, 36
               

               
Conread position:
               
37-516
               

               
Cow position:
               
chr3:18448545-18449037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
195, 36
               

               
Conread position:
               
37-563
               

               
Cow position:
               
chr3:28764964-28764437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
135, 36
               

               
Conread position:
               
37-563
               

               
Cow position:
               
chr3:41569501-41568974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
133, 36
               

               
Conread position:
               
37-563
               

               
Cow position:
               
chr3:49286620-49287147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
135, 36
               

               
Conread position:
               
37-563
               

               
Cow position:
               
chr3:53787936-53787410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
135, 36
               

               
Conread position:
               
37-564
               

               
Cow position:
               
chr3:26474443-26474979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
195, 24
               

               
Conread position:
               
37-650
               

               
Cow position:
               
chr3:70701288-70701901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 22
               

               
Conread position:
               
37-676
               

               
Cow position:
               
chr3:72376683-72377317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
661
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
116, 36
               

               
Conread position:
               
38-297
               

               
Cow position:
               
chr3:84419690-84419440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
38-303
               

               
Cow position:
               
chr3:9403806-9403532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
49, 28
               

               
Conread position:
               
38-563
               

               
Cow position:
               
chr3:11384966-11385490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
132, 35
               

               
Conread position:
               
39-301
               

               
Cow position:
               
chr3:56705293-56705026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
131, 35
               

               
Conread position:
               
39-488
               

               
Cow position:
               
chr3:46856925-46856465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
131, 34
               

               
Conread position:
               
40-299
               

               
Cow position:
               
chr3:71246353-71246614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
41, 33
               

               
Conread position:
               
40-301
               

               
Cow position:
               
chr3:12076411-12076154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
146, 33
               

               
Conread position:
               
40-301
               

               
Cow position:
               
chr3:27784421-27784682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
130, 34
               

               
Conread position:
               
40-304
               

               
Cow position:
               
chr3:69419625-69419360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
14, 25
               

               
Conread position:
               
40-393
               

               
Cow position:
               
chr3:27531349-27530980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
192, 33
               

               
Conread position:
               
40-516
               

               
Cow position:
               
chr3:53223363-53222866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
130, 33
               

               
Conread position:
               
40-563
               

               
Cow position:
               
chr3:18670481-18671008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
130, 33
               

               
Conread position:
               
40-563
               

               
Cow position:
               
chr3:49930784-49930260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
130, 33
               

               
Conread position:
               
41-301
               

               
Cow position:
               
chr3:78921323-78921580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
130, 32
               

               
Conread position:
               
41-563
               

               
Cow position:
               
chr3:58027225-58026699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
129, 32
               

               
Conread position:
               
41-632
               

               
Cow position:
               
chr3:43483248-43483839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
191, 25
               

               
Conread position:
               
42-303
               

               
Cow position:
               
chr3:43316795-43316540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
95, 31
               

               
Conread position:
               
42-303
               

               
Cow position:
               
chr3:67165224-67165490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
26, 46
               

               
Conread position:
               
43-489
               

               
Cow position:
               
chr3:45215339-45214887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
127, 119
               

               
Conread position:
               
45-302
               

               
Cow position:
               
chr3:7567115-7566859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
187, 28
               

               
Conread position:
               
45-303
               

               
Cow position:
               
chr3:17696736-17696478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
127, 28
               

               
Conread position:
               
45-405
               

               
Cow position:
               
chr3:39949614-39949257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
187, 28
               

               
Conread position:
               
45-563
               

               
Cow position:
               
chr3:52011236-52011755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
127, 28
               

               
Conread position:
               
46-283
               

               
Cow position:
               
chr3:15809952-15810189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
186, 27
               

               
Conread position:
               
46-293
               

               
Cow position:
               
chr3:74853171-74853412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
108, 27
               

               
Conread position:
               
46-500
               

               
Cow position:
               
chr3:74849743-74849279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
7, 32
               

               
Conread position:
               
46-695
               

               
Cow position:
               
chr3:31321781-31322430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
676
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 204
               

               
Conread position:
               
47-297
               

               
Cow position:
               
chr3:80904337-80904085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
42, 26
               

               
Conread position:
               
48-284
               

               
Cow position:
               
chr3:43786673-43786910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
50, 18
               

               
Conread position:
               
48-301
               

               
Cow position:
               
chr3:56400037-56400291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
23, 88
               

               
Conread position:
               
48-303
               

               
Cow position:
               
chr3:12712913-12712658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
122, 25
               

               
Conread position:
               
48-303
               

               
Cow position:
               
chr3:76187992-76188247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
125, 25
               

               
Conread position:
               
48-368
               

               
Cow position:
               
chr3:78207978-78207648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
8, 26
               

               
Conread position:
               
48-496
               

               
Cow position:
               
chr3:53645870-53645423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
26, 49
               

               
Conread position:
               
48-619
               

               
Cow position:
               
chr3:22173746-22174292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
68, 26
               

               
Conread position:
               
48-695
               

               
Cow position:
               
chr3:27223485-27224136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
672
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 25
               

               
Conread position:
               
49-301
               

               
Cow position:
               
chr3:54346937-54346687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
188, 24
               

               
Conread position:
               
49-479
               

               
Cow position:
               
chr3:24344393-24343956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
121, 24
               

               
Conread position:
               
49-563
               

               
Cow position:
               
chr3:15233692-15233178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
121, 24
               

               
Conread position:
               
49-563
               

               
Cow position:
               
chr3:28933374-28933889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
121, 10
               

               
Conread position:
               
49-616
               

               
Cow position:
               
chr3:41654998-41655571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 24
               

               
Conread position:
               
50-303
               

               
Cow position:
               
chr3:18907332-18907585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
120, 23
               

               
Conread position:
               
51-303
               

               
Cow position:
               
chr3:46333184-46332932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
121, 25
               

               
Conread position:
               
51-495
               

               
Cow position:
               
chr3:29595673-29596122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
30, 22
               

               
Conread position:
               
51-516
               

               
Cow position:
               
chr3:35808466-35808012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
252, 101
               

               
Conread position:
               
52-301
               

               
Cow position:
               
chr3:14258610-14258363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
221, 25
               

               
Conread position:
               
52-301
               

               
Cow position:
               
chr3:34996434-34996192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
52-303
               

               
Cow position:
               
chr3:2273434-2273685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
115, 21
               

               
Conread position:
               
53-303
               

               
Cow position:
               
chr3:80631717-80631468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
181, 48
               

               
Conread position:
               
53-394
               

               
Cow position:
               
chr3:198833-199172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
219, 20
               

               
Conread position:
               
54-242
               

               
Cow position:
               
chr3:71262048-71261864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
54-298
               

               
Cow position:
               
chr3:15321223-15321461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
56, 19
               

               
Conread position:
               
54-394
               

               
Cow position:
               
chr3:36727499-36727856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
76, 19
               

               
Conread position:
               
59-299
               

               
Cow position:
               
chr3:7467488-7467251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
107, 16
               

               
Conread position:
               
59-301
               

               
Cow position:
               
chr3:53739945-53739698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
111, 14
               

               
Conread position:
               
60-470
               

               
Cow position:
               
chr3:54877121-54877539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
63, 13
               

               
Conread position:
               
60-650
               

               
Cow position:
               
chr3:40738106-40737507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
91, 132
               

               
Conread position:
               
61-277
               

               
Cow position:
               
chr3:64877367-64877149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
96, 12
               

               
Conread position:
               
61-285
               

               
Cow position:
               
chr3:74762066-74762285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
171, 101
               

               
Conread position:
               
61-294
               

               
Cow position:
               
chr3:66650143-66649909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
123, 12
               

               
Conread position:
               
61-301
               

               
Cow position:
               
chr3:7386221-7385981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
111, 12
               

               
Conread position:
               
61-301
               

               
Cow position:
               
chr3:15153134-15153373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
109, 12
               

               
Conread position:
               
61-301
               

               
Cow position:
               
chr3:43825360-43825120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
111, 12
               

               
Conread position:
               
61-303
               

               
Cow position:
               
chr3:58541225-58540983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
109, 12
               

               
Conread position:
               
61-364
               

               
Cow position:
               
chr3:40895841-40896150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
32, 12
               

               
Conread position:
               
63-653
               

               
Cow position:
               
chr3:56494188-56493593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 197
               

               
Conread position:
               
67-277
               

               
Cow position:
               
chr3:19827972-19827763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
105, 95
               

               
Conread position:
               
68-199
               

               
Cow position:
               
chr3:49803057-49803187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
68-490
               

               
Cow position:
               
chr3:64015674-64015252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
164, 96
               

               
Conread position:
               
69-506
               

               
Cow position:
               
chr3:74226039-74225594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
163, 80
               

               
Conread position:
               
69-516
               

               
Cow position:
               
chr3:26219739-26219286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
101, 93
               

               
Conread position:
               
69-563
               

               
Cow position:
               
chr3:3596421-3595925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
101, 95
               

               
Conread position:
               
71-293
               

               
Cow position:
               
chr3:77159496-77159716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
55, 39
               

               
Conread position:
               
72-636
               

               
Cow position:
               
chr3:67451634-67452199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
78, 51
               

               
Conread position:
               
75-511
               

               
Cow position:
               
chr3:68502642-68502198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
10, 34
               

               
Conread position:
               
75-511
               

               
Cow position:
               
chr3:68504192-68503747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
10, 34
               

               
Conread position:
               
75-653
               

               
Cow position:
               
chr3:24905412-24905988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
230, 9
               

               
Conread position:
               
75-696
               

               
Cow position:
               
chr3:43231475-43232091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 92
               

               
Conread position:
               
76-563
               

               
Cow position:
               
chr3:42277757-42277269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
96, 88
               

               
Conread position:
               
79-303
               

               
Cow position:
               
chr3:72123055-72122833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
145, 35
               

               
Conread position:
               
79-675
               

               
Cow position:
               
chr3:69907239-69906650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 91
               

               
Conread position:
               
80-301
               

               
Cow position:
               
chr3:21955487-21955705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
90, 9
               

               
Conread position:
               
82-301
               

               
Cow position:
               
chr3:60891966-60892186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
83-364
               

               
Cow position:
               
chr3:74260000-74260271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
145, 79
               

               
Conread position:
               
83-652
               

               
Cow position:
               
chr3:10055674-10056245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 79
               

               
Conread position:
               
86-516
               

               
Cow position:
               
chr3:53384944-53384507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
146, 84
               

               
Conread position:
               
86-536
               

               
Cow position:
               
chr3:35820228-35820684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
67, 80
               

               
Conread position:
               
86-621
               

               
Cow position:
               
chr3:45300884-45301397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
16, 76
               

               
Conread position:
               
87-301
               

               
Cow position:
               
chr3:54039275-54039491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
145, 75
               

               
Conread position:
               
88-563
               

               
Cow position:
               
chr3:20388964-20388485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
8, 78
               

               
Conread position:
               
89-607
               

               
Cow position:
               
chr3:11532301-11532838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
68, 345
               

               
Conread position:
               
89-651
               

               
Cow position:
               
chr3:24657933-24657374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
78, 169
               

               
Conread position:
               
91-696
               

               
Cow position:
               
chr3:30192961-30192338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
8, 332
               

               
Conread position:
               
94-653
               

               
Cow position:
               
chr3:39197901-39197341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
138, 68
               

               
Conread position:
               
95-477
               

               
Cow position:
               
chr3:38791557-38791164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
9, 23
               

               
Conread position:
               
95-650
               

               
Cow position:
               
chr3:18243301-18242757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 210
               

               
Conread position:
               
96-301
               

               
Cow position:
               
chr3:13495093-13495298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
136, 203
               

               
Conread position:
               
97-278
               

               
Cow position:
               
chr3:65391371-65391551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
73, 59
               

               
Conread position:
               
97-303
               

               
Cow position:
               
chr3:6754203-6754409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
73, 67
               

               
Conread position:
               
97-303
               

               
Cow position:
               
chr3:80444989-80444782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
97-315
               

               
Cow position:
               
chr3:8234762-8234978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
79, 65
               

               
Conread position:
               
97-516
               

               
Cow position:
               
chr3:7857699-7858128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
73, 40
               

               
Conread position:
               
97-563
               

               
Cow position:
               
chr3:40827203-40827671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
73, 67
               

               
Conread position:
               
97-563
               

               
Cow position:
               
chr3:78472473-78472006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
135, 328
               

               
Conread position:
               
97-682
               

               
Cow position:
               
chr3:70415715-70415116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
53, 129
               

               
Conread position:
               
98-696
               

               
Cow position:
               
chr3:22948141-22947551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 18
               

               
Conread position:
               
101-495
               

               
Cow position:
               
chr3:15685547-15685155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
71, 66
               

               
Conread position:
               
104-696
               

               
Cow position:
               
chr3:13451113-13451679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 150
               

               
Conread position:
               
106-694
               

               
Cow position:
               
chr3:763936-764523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 39
               

               
Conread position:
               
109-502
               

               
Cow position:
               
chr3:47686871-47686477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
54, 118
               

               
Conread position:
               
110-625
               

               
Cow position:
               
chr3:69189031-69188535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
122, 52
               

               
Conread position:
               
114-523
               

               
Cow position:
               
chr3:41855055-41854637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 53
               

               
Conread position:
               
116-679
               

               
Cow position:
               
chr3:68379148-68379722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 50
               

               
Conread position:
               
117-286
               

               
Cow position:
               
chr3:15079708-15079539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
107, 54
               

               
Conread position:
               
119-599
               

               
Cow position:
               
chr3:68342883-68342405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
113, 213
               

               
Conread position:
               
124-303
               

               
Cow position:
               
chr3:58866107-58865927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
33, 47
               

               
Conread position:
               
133-303
               

               
Cow position:
               
chr3:16606192-16606025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
99, 37
               

               
Conread position:
               
134-457
               

               
Cow position:
               
chr3:36146016-36145686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
98, 11
               

               
Conread position:
               
134-690
               

               
Cow position:
               
chr3:61183014-61183569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
23, 46
               

               
Conread position:
               
135-634
               

               
Cow position:
               
chr3:63008390-63007880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
45, 10
               

               
Conread position:
               
136-394
               

               
Cow position:
               
chr3:39869986-39869723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
167, 26
               

               
Conread position:
               
137-619
               

               
Cow position:
               
chr3:64083838-64084310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
163, 29
               

               
Conread position:
               
138-476
               

               
Cow position:
               
chr3:3924478-3924116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
86, 296
               

               
Conread position:
               
141-456
               

               
Cow position:
               
chr3:75892590-75892263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
35, 96
               

               
Conread position:
               
145-696
               

               
Cow position:
               
chr3:45677271-45677833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
46, 17
               

               
Conread position:
               
147-695
               

               
Cow position:
               
chr3:23230189-23229655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 18
               

               
Conread position:
               
149-633
               

               
Cow position:
               
chr3:10932692-10933181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
86, 216
               

               
Conread position:
               
155-693
               

               
Cow position:
               
chr3:70354003-70353466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 36
               

               
Conread position:
               
157-277
               

               
Cow position:
               
chr3:43419546-43419666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
75, 11
               

               
Conread position:
               
157-671
               

               
Cow position:
               
chr3:72801073-72800530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
57, 261
               

               
Conread position:
               
157-676
               

               
Cow position:
               
chr3:34433-34923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
122, 27
               

               
Conread position:
               
157-683
               

               
Cow position:
               
chr3:55985090-55985605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
67, 17
               

               
Conread position:
               
157-692
               

               
Cow position:
               
chr3:24795768-24796293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 88
               

               
Conread position:
               
163-302
               

               
Cow position:
               
chr3:14924190-14924331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
165-569
               

               
Cow position:
               
chr3:63705123-63705520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
10, 80
               

               
Conread position:
               
166-619
               

               
Cow position:
               
chr3:18196111-18196558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
131, 234
               

               
Conread position:
               
166-696
               

               
Cow position:
               
chr3:15998909-15999422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
66, 248
               

               
Conread position:
               
170-393
               

               
Cow position:
               
chr3:26304563-26304796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
62, 190
               

               
Conread position:
               
170-592
               

               
Cow position:
               
chr3:13574730-13575137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
54, 67
               

               
Conread position:
               
170-637
               

               
Cow position:
               
chr3:30440578-30440104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
45, 184
               

               
Conread position:
               
170-638
               

               
Cow position:
               
chr3:46808862-46809322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
9, 30
               

               
Conread position:
               
170-696
               

               
Cow position:
               
chr3:57594507-57595039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
62, 20
               

               
Conread position:
               
170-696
               

               
Cow position:
               
chr3:69590697-69590175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 19
               

               
Conread position:
               
171-390
               

               
Cow position:
               
chr3:43426189-43426422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
61, 187
               

               
Conread position:
               
172-696
               

               
Cow position:
               
chr3:60701672-60701135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
66, 242
               

               
Conread position:
               
174-637
               

               
Cow position:
               
chr3:26615850-26615394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
129, 52
               

               
Conread position:
               
174-696
               

               
Cow position:
               
chr3:10049426-10049954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
58, 235
               

               
Conread position:
               
175-516
               

               
Cow position:
               
chr3:14626725-14626376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
65, 50
               

               
Conread position:
               
175-598
               

               
Cow position:
               
chr3:16757589-16758015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
50, 29
               

               
Conread position:
               
175-628
               

               
Cow position:
               
chr3:43633209-43632761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
57, 105
               

               
Conread position:
               
175-695
               

               
Cow position:
               
chr3:50731149-50731654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 113
               

               
Conread position:
               
177-687
               

               
Cow position:
               
chr3:56203309-56202804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
38, 21
               

               
Conread position:
               
178-688
               

               
Cow position:
               
chr3:56576224-56575714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 80
               

               
Conread position:
               
179-379
               

               
Cow position:
               
chr3:72910649-72910862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
181-394
               

               
Cow position:
               
chr3:24623063-24623291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
51, 108
               

               
Conread position:
               
181-651
               

               
Cow position:
               
chr3:80453149-80452686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
122, 169
               

               
Conread position:
               
183-562
               

               
Cow position:
               
chr3:73639166-73639542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
42, 6
               

               
Conread position:
               
183-655
               

               
Cow position:
               
chr3:39861885-39861410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
41, 32
               

               
Conread position:
               
183-696
               

               
Cow position:
               
chr3:76976203-76976719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
49, 70
               

               
Conread position:
               
186-695
               

               
Cow position:
               
chr3:80594682-80595190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
46, 94
               

               
Conread position:
               
189-676
               

               
Cow position:
               
chr3:31779132-31779621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
12, 65
               

               
Conread position:
               
191-696
               

               
Cow position:
               
chr3:8050579-8051114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
41, 72
               

               
Conread position:
               
198-656
               

               
Cow position:
               
chr3:22044292-22043844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
34, 88
               

               
Conread position:
               
198-694
               

               
Cow position:
               
chr3:47518916-47519398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
35, 81
               

               
Conread position:
               
201-696
               

               
Cow position:
               
chr3:31992073-31991572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
23, 96
               

               
Conread position:
               
204-516
               

               
Cow position:
               
chr3:67275494-67275169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
28, 224
               

               
Conread position:
               
207-679
               

               
Cow position:
               
chr3:66859238-66859710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
25, 35
               

               
Conread position:
               
216-649
               

               
Cow position:
               
chr3:25264948-25264516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
16, 72
               

               
Conread position:
               
217-696
               

               
Cow position:
               
chr3:62785107-62784636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
86, 14
               

               
Conread position:
               
223-653
               

               
Cow position:
               
chr3:67002530-67002093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
77, 8
               

               
Conread position:
               
225-632
               

               
Cow position:
               
chr3:32166108-32166524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
80, 219
               

               
Conread position:
               
227-655
               

               
Cow position:
               
chr3:23921164-23920740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 203
               

               
Conread position:
               
228-677
               

               
Cow position:
               
chr3:62820378-62820823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
75, 19
               

               
Conread position:
               
231-695
               

               
Cow position:
               
chr3:78241820-78242290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
72, 126
               

               
Conread position:
               
232-693
               

               
Cow position:
               
chr3:44445304-44444818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
29, 316
               

               
Conread position:
               
246-664
               

               
Cow position:
               
chr3:20224534-20224111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
59, 30
               

               
Conread position:
               
250-692
               

               
Cow position:
               
chr3:75938767-75938329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
54, 128
               

               
Conread position:
               
250-694
               

               
Cow position:
               
chr3:72539972-72539541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
55, 78
               

               
Conread position:
               
252-695
               

               
Cow position:
               
chr3:14520954-14521397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 163
               

               
Conread position:
               
263-695
               

               
Cow position:
               
chr3:70095479-70095044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
42, 103
               

               
Conread position:
               
264-690
               

               
Cow position:
               
chr3:9994007-9993585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
43, 96
               

               
Conread position:
               
267-654
               

               
Cow position:
               
chr3:32344277-32343884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
38, 178
               

               
Conread position:
               
268-695
               

               
Cow position:
               
chr3:57403282-57402854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
36, 156
               

               
Conread position:
               
275-678
               

               
Cow position:
               
chr3:8456997-8456613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
101, 14
               

               
Conread position:
               
302-651
               

               
Cow position:
               
chr3:7739480-7739137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
38, 118
               

               
Conread position:
               
302-653
               

               
Cow position:
               
chr3:44393618-44393970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
39, 118
               

               
Conread position:
               
302-676
               

               
Cow position:
               
chr3:69055761-69056130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
38, 111
               

               
Conread position:
               
302-696
               

               
Cow position:
               
chr3:76267091-76266712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
38, 95
               

               
Conread position:
               
308-690
               

               
Cow position:
               
chr3:18394428-18394060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
34, 23
               

               
Conread position:
               
308-690
               

               
Cow position:
               
chr3:64035956-64036326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
64, 22
               

               
Conread position:
               
313-687
               

               
Cow position:
               
chr3:42876883-42876518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
59, 41
               

               
Conread position:
               
313-690
               

               
Cow position:
               
chr3:4344162-4344528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
25, 100
               

               
Conread position:
               
313-690
               

               
Cow position:
               
chr3:73421083-73420717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
31, 84
               

               
Conread position:
               
313-695
               

               
Cow position:
               
chr3:70200615-70200979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
25, 61
               

               
Conread position:
               
314-618
               

               
Cow position:
               
chr3:68357801-68357504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
30, 120
               

               
Conread position:
               
314-654
               

               
Cow position:
               
chr3:57876915-57877231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
34, 69
               

               
Conread position:
               
320-638
               

               
Cow position:
               
chr3:13684285-13684594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
49, 34
               

               
Conread position:
               
320-696
               

               
Cow position:
               
chr3:8987732-8988096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
16, 120
               

               
Conread position:
               
322-653
               

               
Cow position:
               
chr3:43419664-43419978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
54, 8
               

               
Conread position:
               
323-671
               

               
Cow position:
               
chr3:17885265-17885610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
19, 78
               

               
Conread position:
               
329-676
               

               
Cow position:
               
chr3:61610017-61609683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
47, 85
               

               
Conread position:
               
340-690
               

               
Cow position:
               
chr3:54015228-54014882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
32, 96
               

               
Conread position:
               
340-695
               

               
Cow position:
               
chr3:73399056-73399401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
33, 74
               

               
Conread position:
               
354-684
               

               
Cow position:
               
chr3:39225499-39225185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
19, 60
               

               
Conread position:
               
354-696
               

               
Cow position:
               
chr3:2274016-2274350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
18, 41
               

               
Conread position:
               
369-696
               

               
Cow position:
               
chr3:29151572-29151259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
27, 66
               

               
Conread position:
               
374-696
               

               
Cow position:
               
chr3:31814961-31814645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
172, 34
               

               
Conread position:
               
377-672
               

               
Cow position:
               
chr3:27524055-27523778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
19, 52
               

               
Conread position:
               
412-694
               

               
Cow position:
               
chr3:21035801-21035530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
140, 21
               

               
Conread position:
               
415-695
               

               
Cow position:
               
chr3:40215152-40215426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
135, 17
               

               
Conread position:
               
423-695
               

               
Cow position:
               
chr3:27667436-27667695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
235, 8
               

               
Conread position:
               
427-642
               

               
Cow position:
               
chr3:41914225-41914021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
428-634
               

               
Cow position:
               
chr3:15743419-15743217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
36, 5
               

               
Conread position:
               
428-661
               

               
Cow position:
               
chr3:74867620-74867845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
118, 7
               

               
Conread position:
               
428-675
               

               
Cow position:
               
chr3:26255626-26255390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
131, 45
               

               
Conread position:
               
428-675
               

               
Cow position:
               
chr3:58715766-58715526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
118, 5
               

               
Conread position:
               
428-694
               

               
Cow position:
               
chr3:65922564-65922817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
118, 5
               

               
Conread position:
               
431-692
               

               
Cow position:
               
chr3:72122123-72121869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
115, 29
               

               
Conread position:
               
432-642
               

               
Cow position:
               
chr3:61955977-61956184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
18, 80
               

               
Conread position:
               
433-695
               

               
Cow position:
               
chr3:10679564-10679818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
113, 13
               

               
Conread position:
               
433-696
               

               
Cow position:
               
chr3:1256752-1256998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
113, 34
               

               
Conread position:
               
434-647
               

               
Cow position:
               
chr3:35260335-35260538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
108, 84
               

               
Conread position:
               
434-648
               

               
Cow position:
               
chr3:61205035-61205244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
434-665
               

               
Cow position:
               
chr3:17847058-17846835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
13, 20
               

               
Conread position:
               
434-696
               

               
Cow position:
               
chr3:11651768-11652024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
57, 51
               

               
Conread position:
               
434-696
               

               
Cow position:
               
chr3:28191940-28191684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
35, 81
               

               
Conread position:
               
436-694
               

               
Cow position:
               
chr3:32367067-32367318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
53, 47
               

               
Conread position:
               
441-667
               

               
Cow position:
               
chr3:11570337-11570556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
134, 75
               

               
Conread position:
               
441-696
               

               
Cow position:
               
chr3:26747035-26746793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
48, 32
               

               
Conread position:
               
444-652
               

               
Cow position:
               
chr3:77613615-77613414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
102, 64
               

               
Conread position:
               
446-649
               

               
Cow position:
               
chr3:73053138-73052934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
36, 58
               

               
Conread position:
               
446-692
               

               
Cow position:
               
chr3:59390084-59389836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
100, 39
               

               
Conread position:
               
446-692
               

               
Cow position:
               
chr3:72262165-72262404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
100, 74
               

               
Conread position:
               
451-696
               

               
Cow position:
               
chr3:21542863-21542624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
100, 59
               

               
Conread position:
               
455-693
               

               
Cow position:
               
chr3:23782469-23782239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
92, 54
               

               
Conread position:
               
466-696
               

               
Cow position:
               
chr3:61836683-61836458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
81, 39
               

               
Conread position:
               
475-695
               

               
Cow position:
               
chr3:64300161-64299951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
8, 37
               

               
Conread position:
               
487-673
               

               
Cow position:
               
chr3:84976820-84976639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
64, 27
               

               
Conread position:
               
494-675
               

               
Cow position:
               
chr3:80153580-80153760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
52, 11
               

               
Conread position:
               
494-696
               

               
Cow position:
               
chr3:63248739-63248933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
52, 26
               

               
Conread position:
               
511-692
               

               
Cow position:
               
chr3:77328664-77328484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
36, 14
               

               
Conread position:
               
515-695
               

               
Cow position:
               
chr3:40896372-40896553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
31, 14
               

               
Conread position:
               
517-652
               

               
Cow position:
               
chr3:17321675-17321811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
517-696
               

               
Cow position:
               
chr3:61884545-61884726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
518-668
               

               
Cow position:
               
chr3:43649248-43649398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
32, 146
               

               
Conread position:
               
518-696
               

               
Cow position:
               
chr3:18102939-18103112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
26, 52
               

               
Conread position:
               
519-694
               

               
Cow position:
               
chr3:50587323-50587495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
520-653
               

               
Cow position:
               
chr3:53509389-53509255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
520-696
               

               
Cow position:
               
chr3:53942338-53942158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
144, 26
               

               
Conread position:
               
521-690
               

               
Cow position:
               
chr3:41304195-41304364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 138
               

               
Conread position:
               
522-696
               

               
Cow position:
               
chr3:33330123-33330294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
169, 22
               

               
Conread position:
               
532-693
               

               
Cow position:
               
chr3:61606641-61606800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
18, 76
               
Show alignments to all cow chromosomes.