• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Ss1.1-ruio02_j18.5.5
        

               
Conread position:
               
1-209
               

               
Cow position:
               
chr5:70007368-70007570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr5:15761043-15760822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 69
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr5:57970067-57970329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
40, 75
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr5:4199313-4199029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
41, 75
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr5:27343968-27343667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
36, 75
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr5:27346545-27346846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
36, 75
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr5:47757010-47757296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
37, 75
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr5:50205911-50206210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
41, 61
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr5:10096519-10096230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
42, 75
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr5:32164612-32164318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
39, 56
               

               
Conread position:
               
1-303
               

               
Cow position:
               
chr5:41020543-41020241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
42, 62
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr5:50264248-50263954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
37, 75
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr5:75008746-75008433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
37, 85
               

               
Conread position:
               
1-370
               

               
Cow position:
               
chr5:49673018-49672651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
37, 52
               

               
Conread position:
               
1-404
               

               
Cow position:
               
chr5:47853805-47854235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
40, 75
               

               
Conread position:
               
1-514
               

               
Cow position:
               
chr5:44379765-44380301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
48, 68
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr5:51818835-51819365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
42, 31
               

               
Conread position:
               
1-562
               

               
Cow position:
               
chr5:53555431-53554869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
33, 62
               

               
Conread position:
               
1-586
               

               
Cow position:
               
chr5:8820030-8819438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
41, 62
               

               
Conread position:
               
1-635
               

               
Cow position:
               
chr5:27899821-27899177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
666
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 72
               

               
Conread position:
               
1-636
               

               
Cow position:
               
chr5:28678123-28677510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
655
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 75
               

               
Conread position:
               
1-679
               

               
Cow position:
               
chr5:25940582-25939916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
692
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
38, 67
               

               
Conread position:
               
1-685
               

               
Cow position:
               
chr5:62204797-62205446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
701
               

               
Alignm identity:
               
467
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 77
               

               
Conread position:
               
1-686
               

               
Cow position:
               
chr5:68469398-68468697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
725
               

               
Alignm identity:
               
484
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 75
               

               
Conread position:
               
1-696
               

               
Cow position:
               
chr5:15122977-15122273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
727
               

               
Alignm identity:
               
453
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
41, 67
               

               
Conread position:
               
2-148
               

               
Cow position:
               
chr5:45606342-45606490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
40, 76
               

               
Conread position:
               
2-150
               

               
Cow position:
               
chr5:70103340-70103190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-158
               

               
Cow position:
               
chr5:29432263-29432108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-160
               

               
Cow position:
               
chr5:6694860-6695019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-160
               

               
Cow position:
               
chr5:23565589-23565749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-160
               

               
Cow position:
               
chr5:26460954-26461115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
26, 75
               

               
Conread position:
               
2-160
               

               
Cow position:
               
chr5:38075531-38075371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-160
               

               
Cow position:
               
chr5:54360795-54360635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-191
               

               
Cow position:
               
chr5:27058313-27058123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-199
               

               
Cow position:
               
chr5:16125193-16124994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
41, 67
               

               
Conread position:
               
2-207
               

               
Cow position:
               
chr5:21524374-21524577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
40, 77
               

               
Conread position:
               
2-209
               

               
Cow position:
               
chr5:18703113-18702904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-209
               

               
Cow position:
               
chr5:36410114-36409905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-209
               

               
Cow position:
               
chr5:40864503-40864295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-209
               

               
Cow position:
               
chr5:48409129-48408923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
2-212
               

               
Cow position:
               
chr5:51794902-51794691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
42, 119
               

               
Conread position:
               
2-220
               

               
Cow position:
               
chr5:40396385-40396609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
2-223
               

               
Cow position:
               
chr5:51689596-51689379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
36, 26
               

               
Conread position:
               
2-234
               

               
Cow position:
               
chr5:445805-446039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-234
               

               
Cow position:
               
chr5:10457584-10457816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
36, 75
               

               
Conread position:
               
2-235
               

               
Cow position:
               
chr5:41953983-41953747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
40, 68
               

               
Conread position:
               
2-235
               

               
Cow position:
               
chr5:48805144-48804909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-235
               

               
Cow position:
               
chr5:49490293-49490525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-238
               

               
Cow position:
               
chr5:12133919-12134158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-239
               

               
Cow position:
               
chr5:26186477-26186237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
36, 74
               

               
Conread position:
               
2-251
               

               
Cow position:
               
chr5:37402483-37402724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
230, 16
               

               
Conread position:
               
2-253
               

               
Cow position:
               
chr5:24101976-24102230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
42, 74
               

               
Conread position:
               
2-255
               

               
Cow position:
               
chr5:54693790-54693534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
38, 74
               

               
Conread position:
               
2-256
               

               
Cow position:
               
chr5:34532944-34533198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
40, 75
               

               
Conread position:
               
2-262
               

               
Cow position:
               
chr5:24299339-24299602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-263
               

               
Cow position:
               
chr5:4015546-4015282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr5:46797225-46797496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
40, 73
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr5:69337096-69337368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-273
               

               
Cow position:
               
chr5:28375177-28374902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
33, 75
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr5:397032-396755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr5:1383299-1383577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr5:3500802-3500528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
168, 65
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr5:5685952-5685677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr5:5715763-5715484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr5:10922171-10922449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr5:15677385-15677660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
168, 71
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr5:25913044-25913320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr5:27907142-27906864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr5:39815982-39815712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
40, 11
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr5:55088193-55088471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
36, 74
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr5:58192241-58192519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr5:59303973-59303703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
65, 57
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr5:62377690-62377961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
156, 24
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr5:72345516-72345239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
41, 76
               

               
Conread position:
               
2-281
               

               
Cow position:
               
chr5:60519360-60519077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-283
               

               
Cow position:
               
chr5:39243040-39242761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
41, 52
               

               
Conread position:
               
2-283
               

               
Cow position:
               
chr5:54622941-54623224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
29, 74
               

               
Conread position:
               
2-284
               

               
Cow position:
               
chr5:10840142-10839866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
168, 37
               

               
Conread position:
               
2-286
               

               
Cow position:
               
chr5:1344566-1344280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
18, 68
               

               
Conread position:
               
2-286
               

               
Cow position:
               
chr5:12235019-12235303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
42, 74
               

               
Conread position:
               
2-286
               

               
Cow position:
               
chr5:53753263-53752974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
40, 77
               

               
Conread position:
               
2-286
               

               
Cow position:
               
chr5:58530170-58529884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
156, 37
               

               
Conread position:
               
2-289
               

               
Cow position:
               
chr5:57613743-57613464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
40, 67
               

               
Conread position:
               
2-292
               

               
Cow position:
               
chr5:32316003-32315709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
36, 69
               

               
Conread position:
               
2-293
               

               
Cow position:
               
chr5:3551386-3551103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
37, 68
               

               
Conread position:
               
2-293
               

               
Cow position:
               
chr5:13718834-13718541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-293
               

               
Cow position:
               
chr5:55358477-55358777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
36, 50
               

               
Conread position:
               
2-294
               

               
Cow position:
               
chr5:54089024-54089305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
234, 27
               

               
Conread position:
               
2-297
               

               
Cow position:
               
chr5:6670854-6670557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
26, 74
               

               
Conread position:
               
2-297
               

               
Cow position:
               
chr5:27174032-27174324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
37, 26
               

               
Conread position:
               
2-297
               

               
Cow position:
               
chr5:32088454-32088161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
44, 67
               

               
Conread position:
               
2-297
               

               
Cow position:
               
chr5:34922687-34922405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
26, 74
               

               
Conread position:
               
2-297
               

               
Cow position:
               
chr5:41333913-41334206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
79, 71
               

               
Conread position:
               
2-297
               

               
Cow position:
               
chr5:50728629-50728925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr5:70249459-70249749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
123, 65
               

               
Conread position:
               
2-299
               

               
Cow position:
               
chr5:47565459-47565159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-299
               

               
Cow position:
               
chr5:59448389-59448095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
40, 68
               

               
Conread position:
               
2-300
               

               
Cow position:
               
chr5:5682179-5681881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-300
               

               
Cow position:
               
chr5:14558131-14557828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
40, 67
               

               
Conread position:
               
2-300
               

               
Cow position:
               
chr5:34678201-34678497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
37, 66
               

               
Conread position:
               
2-300
               

               
Cow position:
               
chr5:58538673-58538972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
42, 76
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr5:1640549-1640247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr5:3970848-3971150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr5:5812783-5812481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
41, 67
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr5:9676304-9676004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
36, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr5:10261939-10261640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
148, 63
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr5:14630610-14630305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
41, 76
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr5:23683788-23683486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
37, 62
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr5:24643500-24643209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
36, 75
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr5:27491299-27491591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
33, 75
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr5:27656180-27656483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
40, 67
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr5:31503477-31503766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
44, 68
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr5:32964733-32964432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
35, 73
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr5:37047230-37047533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr5:37758515-37758213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
38, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr5:37782809-37782507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr5:39936424-39936729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
40, 67
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr5:42671705-42671405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
40, 63
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr5:43350120-43350422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
36, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr5:45836892-45836587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
42, 62
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr5:46625949-46625654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
35, 73
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr5:54038505-54038812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
42, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr5:55832514-55832209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
223, 40
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr5:57125330-57125632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr5:57949969-57949672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
188, 22
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr5:58900718-58900416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr5:62548075-62548381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
41, 75
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr5:63648167-63647864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
33, 76
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr5:72007564-72007273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
152, 37
               

               
Conread position:
               
2-302
               

               
Cow position:
               
chr5:13702437-13702727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
40, 14
               

               
Conread position:
               
2-302
               

               
Cow position:
               
chr5:23641695-23641392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-302
               

               
Cow position:
               
chr5:48247525-48247826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
96, 37
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr5:279854-279550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr5:407767-408071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr5:693879-694181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
40, 62
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr5:2917783-2918085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
40, 75
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr5:3789549-3789853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr5:4071173-4071477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr5:4542315-4542622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
40, 21
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr5:4683175-4682871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr5:4963060-4962762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
37, 73
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr5:5106549-5106853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr5:6060306-6060002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr5:6151506-6151202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr5:6772891-6773195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr5:9071494-9071195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
40, 61
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr5:10514445-10514750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr5:10542350-10542049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
41, 61
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr5:11835136-11834831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr5:13807435-13807132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
40, 14
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr5:19780710-19780402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr5:21188260-21188561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
40, 61
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr5:22775213-22775496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
38, 60
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr5:29255888-29255584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr5:29742235-29741928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
16, 77
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr5:31785603-31785911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
33, 72
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr5:34559463-34559764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
40, 88
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr5:38883362-38883059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
40, 26
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr5:41547693-41547400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr5:43984410-43984712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr5:44709046-44708741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr5:45705337-45705636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr5:46667400-46667699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr5:46676939-46677240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr5:46779841-46780140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr5:46816777-46816476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr5:47343200-47343504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
38, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr5:47750253-47750555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
42, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr5:48026594-48026897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr5:49117025-49116724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr5:49221173-49220867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
38, 75
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr5:50622920-50622616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr5:51165984-51165681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
21, 75
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr5:51746544-51746848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
37, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr5:53185177-53184874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
40, 62
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr5:56931565-56931261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr5:57986821-57987122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
36, 68
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr5:58322407-58322106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr5:59268748-59269050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
230, 65
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr5:60376915-60376610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
9, 75
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr5:64061653-64061957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr5:66119922-66119621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr5:66351890-66352190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
37, 75
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr5:69771477-69771782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
38, 67
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr5:72857201-72857507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-304
               

               
Cow position:
               
chr5:31217414-31217719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-304
               

               
Cow position:
               
chr5:48542995-48542694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
41, 30
               

               
Conread position:
               
2-304
               

               
Cow position:
               
chr5:62159596-62159284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
38, 74
               

               
Conread position:
               
2-310
               

               
Cow position:
               
chr5:24221312-24221616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
17, 79
               

               
Conread position:
               
2-328
               

               
Cow position:
               
chr5:19561178-19560856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-350
               

               
Cow position:
               
chr5:52605279-52604930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
42, 74
               

               
Conread position:
               
2-367
               

               
Cow position:
               
chr5:70289586-70289218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
27, 8
               

               
Conread position:
               
2-369
               

               
Cow position:
               
chr5:51502200-51502573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-370
               

               
Cow position:
               
chr5:7553087-7553463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
235, 71
               

               
Conread position:
               
2-374
               

               
Cow position:
               
chr5:48405684-48405314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
33, 72
               

               
Conread position:
               
2-388
               

               
Cow position:
               
chr5:31145472-31145083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-390
               

               
Cow position:
               
chr5:16909589-16909188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
41, 76
               

               
Conread position:
               
2-390
               

               
Cow position:
               
chr5:39216581-39216981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-390
               

               
Cow position:
               
chr5:45168450-45168048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
34, 74
               

               
Conread position:
               
2-393
               

               
Cow position:
               
chr5:35786672-35787061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
291, 64
               

               
Conread position:
               
2-394
               

               
Cow position:
               
chr5:69858692-69859081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
60, 72
               

               
Conread position:
               
2-452
               

               
Cow position:
               
chr5:18844353-18844801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
34, 74
               

               
Conread position:
               
2-457
               

               
Cow position:
               
chr5:41557462-41557006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
159, 22
               

               
Conread position:
               
2-460
               

               
Cow position:
               
chr5:50063865-50064329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
230, 113
               

               
Conread position:
               
2-461
               

               
Cow position:
               
chr5:25023614-25024060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
114, 48
               

               
Conread position:
               
2-468
               

               
Cow position:
               
chr5:55677188-55677664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
41, 21
               

               
Conread position:
               
2-477
               

               
Cow position:
               
chr5:4753807-4753323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-478
               

               
Cow position:
               
chr5:49132536-49133025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
40, 31
               

               
Conread position:
               
2-479
               

               
Cow position:
               
chr5:10261098-10260615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-489
               

               
Cow position:
               
chr5:5924651-5924160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
170, 40
               

               
Conread position:
               
2-489
               

               
Cow position:
               
chr5:18558092-18557595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-489
               

               
Cow position:
               
chr5:30582652-30583149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
41, 14
               

               
Conread position:
               
2-489
               

               
Cow position:
               
chr5:37288510-37289007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-489
               

               
Cow position:
               
chr5:43437616-43437119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-489
               

               
Cow position:
               
chr5:53005932-53005437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
40, 14
               

               
Conread position:
               
2-489
               

               
Cow position:
               
chr5:55631390-55631887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
38, 74
               

               
Conread position:
               
2-490
               

               
Cow position:
               
chr5:709826-709327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
35, 74
               

               
Conread position:
               
2-490
               

               
Cow position:
               
chr5:825534-826032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-490
               

               
Cow position:
               
chr5:10418020-10417524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
40, 72
               

               
Conread position:
               
2-490
               

               
Cow position:
               
chr5:11631659-11631161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-490
               

               
Cow position:
               
chr5:35497834-35498331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
40, 67
               

               
Conread position:
               
2-490
               

               
Cow position:
               
chr5:42283489-42283987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-490
               

               
Cow position:
               
chr5:53075544-53075046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-490
               

               
Cow position:
               
chr5:54951796-54951294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
40, 79
               

               
Conread position:
               
2-491
               

               
Cow position:
               
chr5:6124837-6124338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-491
               

               
Cow position:
               
chr5:14636253-14635755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-491
               

               
Cow position:
               
chr5:18118649-18118151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
36, 68
               

               
Conread position:
               
2-491
               

               
Cow position:
               
chr5:19978589-19978086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-491
               

               
Cow position:
               
chr5:31709626-31710117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
168, 43
               

               
Conread position:
               
2-491
               

               
Cow position:
               
chr5:37380412-37380910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
44, 74
               

               
Conread position:
               
2-491
               

               
Cow position:
               
chr5:45179521-45179024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-491
               

               
Cow position:
               
chr5:54337228-54337723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
168, 72
               

               
Conread position:
               
2-493
               

               
Cow position:
               
chr5:69753302-69752787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
29, 76
               

               
Conread position:
               
2-493
               

               
Cow position:
               
chr5:70960845-70960346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
35, 74
               

               
Conread position:
               
2-495
               

               
Cow position:
               
chr5:52289082-52289577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
42, 74
               

               
Conread position:
               
2-499
               

               
Cow position:
               
chr5:14551275-14550778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
40, 75
               

               
Conread position:
               
2-499
               

               
Cow position:
               
chr5:16206833-16206335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-499
               

               
Cow position:
               
chr5:37942484-37941985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-506
               

               
Cow position:
               
chr5:51074803-51074300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 14
               

               
Conread position:
               
2-512
               

               
Cow position:
               
chr5:48574473-48573940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
38, 74
               

               
Conread position:
               
2-514
               

               
Cow position:
               
chr5:49912332-49912873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
16, 77
               

               
Conread position:
               
2-515
               

               
Cow position:
               
chr5:14538403-14537877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
41, 22
               

               
Conread position:
               
2-515
               

               
Cow position:
               
chr5:18126937-18127468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
40, 31
               

               
Conread position:
               
2-515
               

               
Cow position:
               
chr5:26096597-26097119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
38, 74
               

               
Conread position:
               
2-515
               

               
Cow position:
               
chr5:27178961-27179478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-516
               

               
Cow position:
               
chr5:15598934-15598409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
47, 72
               

               
Conread position:
               
2-516
               

               
Cow position:
               
chr5:26466929-26467444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
40, 72
               

               
Conread position:
               
2-516
               

               
Cow position:
               
chr5:30276010-30276516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
9, 82
               

               
Conread position:
               
2-516
               

               
Cow position:
               
chr5:31634758-31635275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
235, 40
               

               
Conread position:
               
2-516
               

               
Cow position:
               
chr5:49127033-49127575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 78
               

               
Conread position:
               
2-516
               

               
Cow position:
               
chr5:56442582-56443098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-516
               

               
Cow position:
               
chr5:58004550-58005068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
20, 75
               

               
Conread position:
               
2-516
               

               
Cow position:
               
chr5:59782440-59781936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
302, 36
               

               
Conread position:
               
2-516
               

               
Cow position:
               
chr5:66256949-66257466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-516
               

               
Cow position:
               
chr5:72901854-72902383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
41, 14
               

               
Conread position:
               
2-523
               

               
Cow position:
               
chr5:14833305-14832776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
222, 31
               

               
Conread position:
               
2-553
               

               
Cow position:
               
chr5:10772504-10771949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-553
               

               
Cow position:
               
chr5:44275921-44276477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
38, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr5:351532-350966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr5:411393-410829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr5:442983-442424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr5:1059241-1058675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
38, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr5:1338595-1338037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
168, 71
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr5:3229435-3228872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
40, 61
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr5:3544622-3545186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr5:4041463-4042028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr5:5814774-5814209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr5:6455337-6454773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr5:7175624-7176187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr5:7498659-7498094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr5:10479316-10478753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
37, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr5:12325263-12324683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr5:19284176-19283619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
36, 68
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr5:20107704-20107143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
36, 68
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr5:21189544-21190108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
40, 64
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr5:23882004-23881440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
40, 62
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr5:24633400-24633965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr5:26053057-26053622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
36, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr5:27046234-27046798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr5:28013183-28013748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr5:29633658-29633093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr5:29634755-29635320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr5:31285183-31285748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr5:34683036-34682474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
37, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr5:36369666-36369101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr5:37609683-37609118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr5:37626172-37626737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr5:38663051-38663609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
170, 59
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr5:39363198-39363758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr5:41469129-41469675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
369, 27
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr5:41586600-41587165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr5:43395618-43396183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr5:47560234-47559670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr5:47564991-47564426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr5:48373989-48374554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr5:49103150-49103716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr5:52239941-52239376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr5:52822882-52822318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr5:54927595-54927036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
230, 71
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr5:54929923-54929368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
230, 71
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr5:55722855-55723419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr5:57336038-57335473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr5:58770546-58769984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr5:59064769-59065335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr5:59146934-59147497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
40, 62
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr5:59518690-59518125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr5:64778675-64778115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr5:68273523-68272958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
38, 74
               

               
Conread position:
               
2-564
               

               
Cow position:
               
chr5:41980711-41981265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 77
               

               
Conread position:
               
2-589
               

               
Cow position:
               
chr5:22769761-22770353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
89, 64
               

               
Conread position:
               
2-593
               

               
Cow position:
               
chr5:44752997-44752419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
38, 74
               

               
Conread position:
               
2-593
               

               
Cow position:
               
chr5:47704833-47704237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-599
               

               
Cow position:
               
chr5:21828157-21828764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-638
               

               
Cow position:
               
chr5:21220505-21219873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
657
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 12
               

               
Conread position:
               
2-651
               

               
Cow position:
               
chr5:60275127-60275757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
666
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-652
               

               
Cow position:
               
chr5:28037410-28038058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
670
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 65
               

               
Conread position:
               
2-653
               

               
Cow position:
               
chr5:21118963-21119623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
679
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-655
               

               
Cow position:
               
chr5:21185009-21184370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
671
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
14, 64
               

               
Conread position:
               
2-655
               

               
Cow position:
               
chr5:28345559-28346216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
675
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 180
               

               
Conread position:
               
2-655
               

               
Cow position:
               
chr5:74432040-74432671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
668
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 65
               

               
Conread position:
               
2-656
               

               
Cow position:
               
chr5:57363465-57362833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
672
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-674
               

               
Cow position:
               
chr5:8421252-8420588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
687
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 71
               

               
Conread position:
               
2-690
               

               
Cow position:
               
chr5:32261162-32260485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
713
               

               
Alignm identity:
               
479
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 97
               

               
Conread position:
               
2-695
               

               
Cow position:
               
chr5:35964277-35964962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
715
               

               
Alignm identity:
               
493
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 16
               

               
Conread position:
               
2-696
               

               
Cow position:
               
chr5:23351392-23352088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
722
               

               
Alignm identity:
               
485
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 74
               

               
Conread position:
               
2-696
               

               
Cow position:
               
chr5:33189535-33190220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
718
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 24
               

               
Conread position:
               
3-225
               

               
Cow position:
               
chr5:52041162-52040942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
39, 73
               

               
Conread position:
               
3-282
               

               
Cow position:
               
chr5:18491739-18492020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
39, 73
               

               
Conread position:
               
3-300
               

               
Cow position:
               
chr5:58320704-58321000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
39, 73
               

               
Conread position:
               
3-301
               

               
Cow position:
               
chr5:4040792-4040492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
37, 72
               

               
Conread position:
               
3-301
               

               
Cow position:
               
chr5:7808556-7808256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
35, 73
               

               
Conread position:
               
3-301
               

               
Cow position:
               
chr5:45284292-45283997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
19, 75
               

               
Conread position:
               
3-302
               

               
Cow position:
               
chr5:41228719-41228420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
39, 26
               

               
Conread position:
               
3-303
               

               
Cow position:
               
chr5:11638845-11639144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
158, 30
               

               
Conread position:
               
3-303
               

               
Cow position:
               
chr5:13206077-13205770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
41, 73
               

               
Conread position:
               
3-303
               

               
Cow position:
               
chr5:72041508-72041811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
40, 73
               

               
Conread position:
               
3-459
               

               
Cow position:
               
chr5:35261772-35262250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
8, 74
               

               
Conread position:
               
3-491
               

               
Cow position:
               
chr5:1395133-1394626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
39, 73
               

               
Conread position:
               
3-492
               

               
Cow position:
               
chr5:21555766-21555261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
32, 75
               

               
Conread position:
               
3-498
               

               
Cow position:
               
chr5:19817492-19816998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
35, 107
               

               
Conread position:
               
3-667
               

               
Cow position:
               
chr5:26335817-26335149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
688
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
39, 24
               

               
Conread position:
               
3-694
               

               
Cow position:
               
chr5:61994915-61995592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
706
               

               
Alignm identity:
               
471
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 29
               

               
Conread position:
               
3-696
               

               
Cow position:
               
chr5:63631197-63631887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
711
               

               
Alignm identity:
               
470
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 73
               

               
Conread position:
               
4-242
               

               
Cow position:
               
chr5:21547964-21547735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
38, 65
               

               
Conread position:
               
4-277
               

               
Cow position:
               
chr5:23648107-23647834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
29, 72
               

               
Conread position:
               
4-297
               

               
Cow position:
               
chr5:33472200-33471909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
39, 72
               

               
Conread position:
               
4-300
               

               
Cow position:
               
chr5:5881472-5881181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
40, 72
               

               
Conread position:
               
4-300
               

               
Cow position:
               
chr5:24946713-24947001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
228, 38
               

               
Conread position:
               
4-303
               

               
Cow position:
               
chr5:66574320-66574610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
219, 62
               

               
Conread position:
               
4-303
               

               
Cow position:
               
chr5:68255266-68254956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
38, 73
               

               
Conread position:
               
4-350
               

               
Cow position:
               
chr5:62143634-62143279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 69
               

               
Conread position:
               
4-568
               

               
Cow position:
               
chr5:23006797-23006235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
39, 67
               

               
Conread position:
               
4-653
               

               
Cow position:
               
chr5:21592490-21593127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
663
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 72
               

               
Conread position:
               
4-679
               

               
Cow position:
               
chr5:68461414-68460760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
688
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
37, 57
               

               
Conread position:
               
5-209
               

               
Cow position:
               
chr5:9412592-9412387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
37, 11
               

               
Conread position:
               
5-275
               

               
Cow position:
               
chr5:26134151-26133878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
37, 71
               

               
Conread position:
               
5-286
               

               
Cow position:
               
chr5:54170100-54170378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
5-292
               

               
Cow position:
               
chr5:62171689-62171976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
33, 61
               

               
Conread position:
               
5-302
               

               
Cow position:
               
chr5:56467011-56467309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
36, 70
               

               
Conread position:
               
5-396
               

               
Cow position:
               
chr5:73967055-73966653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
16, 80
               

               
Conread position:
               
5-449
               

               
Cow position:
               
chr5:1216672-1217128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
15, 9
               

               
Conread position:
               
6-235
               

               
Cow position:
               
chr5:58245662-58245892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
31, 69
               

               
Conread position:
               
6-277
               

               
Cow position:
               
chr5:18250377-18250651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
36, 70
               

               
Conread position:
               
6-303
               

               
Cow position:
               
chr5:2977117-2977418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
36, 63
               

               
Conread position:
               
6-303
               

               
Cow position:
               
chr5:24087720-24087420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
36, 72
               

               
Conread position:
               
6-303
               

               
Cow position:
               
chr5:29968938-29969238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
37, 70
               

               
Conread position:
               
6-303
               

               
Cow position:
               
chr5:51309273-51309572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
36, 63
               

               
Conread position:
               
6-303
               

               
Cow position:
               
chr5:73485556-73485259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
40, 68
               

               
Conread position:
               
6-516
               

               
Cow position:
               
chr5:27201528-27201009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
34, 70
               

               
Conread position:
               
6-516
               

               
Cow position:
               
chr5:28331015-28330507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
36, 70
               

               
Conread position:
               
6-553
               

               
Cow position:
               
chr5:34527886-34528417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
43, 68
               

               
Conread position:
               
6-563
               

               
Cow position:
               
chr5:10853504-10852948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
36, 71
               

               
Conread position:
               
6-696
               

               
Cow position:
               
chr5:33063263-33063934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
701
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
37, 70
               

               
Conread position:
               
7-563
               

               
Cow position:
               
chr5:49522034-49522594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
35, 67
               

               
Conread position:
               
8-247
               

               
Cow position:
               
chr5:40976906-40977141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
85, 59
               

               
Conread position:
               
8-300
               

               
Cow position:
               
chr5:17729604-17729898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
35, 68
               

               
Conread position:
               
8-301
               

               
Cow position:
               
chr5:57075011-57074713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
27, 69
               

               
Conread position:
               
8-303
               

               
Cow position:
               
chr5:27549182-27548884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
32, 68
               

               
Conread position:
               
8-630
               

               
Cow position:
               
chr5:24544112-24543491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 68
               

               
Conread position:
               
9-277
               

               
Cow position:
               
chr5:20269802-20270072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
33, 7
               

               
Conread position:
               
9-301
               

               
Cow position:
               
chr5:55194766-55195057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
29, 43
               

               
Conread position:
               
9-336
               

               
Cow position:
               
chr5:62277629-62277955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
34, 67
               

               
Conread position:
               
9-563
               

               
Cow position:
               
chr5:46587732-46587174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
33, 67
               

               
Conread position:
               
9-678
               

               
Cow position:
               
chr5:46318103-46317425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
698
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 60
               

               
Conread position:
               
10-328
               

               
Cow position:
               
chr5:70334100-70333775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
33, 49
               

               
Conread position:
               
11-301
               

               
Cow position:
               
chr5:55985975-55986263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
221, 29
               

               
Conread position:
               
11-620
               

               
Cow position:
               
chr5:32614714-32614121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 232
               

               
Conread position:
               
12-563
               

               
Cow position:
               
chr5:29223366-29223909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
30, 64
               

               
Conread position:
               
12-676
               

               
Cow position:
               
chr5:54328661-54329306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
688
               

               
Alignm identity:
               
470
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 208
               

               
Conread position:
               
13-301
               

               
Cow position:
               
chr5:7066886-7066595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
29, 63
               

               
Conread position:
               
13-458
               

               
Cow position:
               
chr5:38268880-38269328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
22, 58
               

               
Conread position:
               
13-516
               

               
Cow position:
               
chr5:39448216-39447706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
27, 63
               

               
Conread position:
               
15-679
               

               
Cow position:
               
chr5:30347637-30346979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
685
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 61
               

               
Conread position:
               
18-257
               

               
Cow position:
               
chr5:22756395-22756638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
19-499
               

               
Cow position:
               
chr5:30816031-30816523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
19, 57
               

               
Conread position:
               
19-516
               

               
Cow position:
               
chr5:55943090-55942573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
24, 57
               

               
Conread position:
               
20-157
               

               
Cow position:
               
chr5:6986041-6985906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
20-277
               

               
Cow position:
               
chr5:33537050-33537309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
22, 56
               

               
Conread position:
               
20-303
               

               
Cow position:
               
chr5:34464264-34463979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
22, 40
               

               
Conread position:
               
20-563
               

               
Cow position:
               
chr5:11986840-11986293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
22, 56
               

               
Conread position:
               
21-256
               

               
Cow position:
               
chr5:51070526-51070762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
22, 55
               

               
Conread position:
               
21-299
               

               
Cow position:
               
chr5:6901427-6901147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
16, 55
               

               
Conread position:
               
21-407
               

               
Cow position:
               
chr5:56903563-56903954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
170, 54
               

               
Conread position:
               
22-301
               

               
Cow position:
               
chr5:57625719-57625996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
21, 54
               

               
Conread position:
               
22-303
               

               
Cow position:
               
chr5:44532610-44532894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
20, 54
               

               
Conread position:
               
22-516
               

               
Cow position:
               
chr5:21943697-21944206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 54
               

               
Conread position:
               
22-516
               

               
Cow position:
               
chr5:35207582-35208086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
20, 47
               

               
Conread position:
               
23-448
               

               
Cow position:
               
chr5:32697461-32697040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
19, 53
               

               
Conread position:
               
28-277
               

               
Cow position:
               
chr5:40864236-40863984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
14, 48
               

               
Conread position:
               
28-563
               

               
Cow position:
               
chr5:35543011-35543550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
12, 48
               

               
Conread position:
               
28-563
               

               
Cow position:
               
chr5:46845721-46845182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
14, 48
               

               
Conread position:
               
28-690
               

               
Cow position:
               
chr5:75625385-75626025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
680
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 48
               

               
Conread position:
               
29-235
               

               
Cow position:
               
chr5:26094829-26094622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
17, 46
               

               
Conread position:
               
29-301
               

               
Cow position:
               
chr5:40357614-40357343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
12, 38
               

               
Conread position:
               
29-682
               

               
Cow position:
               
chr5:26058472-26059115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
667
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 45
               

               
Conread position:
               
30-282
               

               
Cow position:
               
chr5:14939487-14939243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
14, 39
               

               
Conread position:
               
36-271
               

               
Cow position:
               
chr5:57772437-57772203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
136, 5
               

               
Conread position:
               
36-289
               

               
Cow position:
               
chr5:25928339-25928099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
196, 30
               

               
Conread position:
               
36-297
               

               
Cow position:
               
chr5:70644796-70644530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
122, 23
               

               
Conread position:
               
36-299
               

               
Cow position:
               
chr5:61361807-61361546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
170, 30
               

               
Conread position:
               
36-300
               

               
Cow position:
               
chr5:32393950-32394214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
134, 37
               

               
Conread position:
               
36-301
               

               
Cow position:
               
chr5:53835031-53835298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
80, 37
               

               
Conread position:
               
36-390
               

               
Cow position:
               
chr5:37432461-37432100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
136, 37
               

               
Conread position:
               
36-563
               

               
Cow position:
               
chr5:37431153-37430625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
136, 37
               

               
Conread position:
               
36-651
               

               
Cow position:
               
chr5:45609038-45608439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
267, 37
               

               
Conread position:
               
37-242
               

               
Cow position:
               
chr5:70402223-70402424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
195, 35
               

               
Conread position:
               
37-261
               

               
Cow position:
               
chr5:37424973-37425197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
195, 36
               

               
Conread position:
               
37-282
               

               
Cow position:
               
chr5:20776234-20775998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
197, 36
               

               
Conread position:
               
37-301
               

               
Cow position:
               
chr5:4085255-4085517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
113, 24
               

               
Conread position:
               
37-301
               

               
Cow position:
               
chr5:19915144-19915408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
135, 36
               

               
Conread position:
               
37-301
               

               
Cow position:
               
chr5:27903761-27904025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
130, 61
               

               
Conread position:
               
37-301
               

               
Cow position:
               
chr5:48239107-48238847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
202, 36
               

               
Conread position:
               
37-301
               

               
Cow position:
               
chr5:54110573-54110825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
195, 37
               

               
Conread position:
               
37-301
               

               
Cow position:
               
chr5:65207210-65206947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
196, 36
               

               
Conread position:
               
37-303
               

               
Cow position:
               
chr5:62427606-62427870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
133, 23
               

               
Conread position:
               
37-304
               

               
Cow position:
               
chr5:50483572-50483307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
128, 38
               

               
Conread position:
               
37-390
               

               
Cow position:
               
chr5:37190749-37190392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
133, 36
               

               
Conread position:
               
37-490
               

               
Cow position:
               
chr5:5080822-5081280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
135, 35
               

               
Conread position:
               
37-516
               

               
Cow position:
               
chr5:42668053-42667564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
23, 37
               

               
Conread position:
               
37-516
               

               
Cow position:
               
chr5:65312315-65312794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
132, 17
               

               
Conread position:
               
37-519
               

               
Cow position:
               
chr5:44054695-44054210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
79, 36
               

               
Conread position:
               
37-651
               

               
Cow position:
               
chr5:37715258-37714635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
635
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
20, 37
               

               
Conread position:
               
37-653
               

               
Cow position:
               
chr5:74462697-74462083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
637
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 36
               

               
Conread position:
               
38-242
               

               
Cow position:
               
chr5:27321754-27321551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
132, 35
               

               
Conread position:
               
38-516
               

               
Cow position:
               
chr5:12315661-12316139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
134, 28
               

               
Conread position:
               
39-515
               

               
Cow position:
               
chr5:21616811-21617279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
169, 34
               

               
Conread position:
               
40-263
               

               
Cow position:
               
chr5:1641571-1641350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
132, 20
               

               
Conread position:
               
40-516
               

               
Cow position:
               
chr5:44848672-44848192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
130, 33
               

               
Conread position:
               
41-301
               

               
Cow position:
               
chr5:3581921-3582180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
129, 32
               

               
Conread position:
               
41-494
               

               
Cow position:
               
chr5:45999681-45999218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
102, 32
               

               
Conread position:
               
42-297
               

               
Cow position:
               
chr5:64587827-64588077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
169, 20
               

               
Conread position:
               
42-490
               

               
Cow position:
               
chr5:10299716-10300171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
128, 31
               

               
Conread position:
               
45-300
               

               
Cow position:
               
chr5:4630459-4630719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
102, 28
               

               
Conread position:
               
45-301
               

               
Cow position:
               
chr5:57584363-57584620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
127, 119
               

               
Conread position:
               
45-312
               

               
Cow position:
               
chr5:57147941-57148207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
187, 15
               

               
Conread position:
               
45-563
               

               
Cow position:
               
chr5:11989110-11988591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
125, 28
               

               
Conread position:
               
46-602
               

               
Cow position:
               
chr5:22648912-22649470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
185, 28
               

               
Conread position:
               
48-303
               

               
Cow position:
               
chr5:52638742-52638488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
122, 25
               

               
Conread position:
               
49-489
               

               
Cow position:
               
chr5:31730547-31730984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
183, 24
               

               
Conread position:
               
50-301
               

               
Cow position:
               
chr5:43923797-43923546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
120, 23
               

               
Conread position:
               
51-303
               

               
Cow position:
               
chr5:37586692-37586437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
113, 22
               

               
Conread position:
               
52-297
               

               
Cow position:
               
chr5:53764392-53764146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
105, 9
               

               
Conread position:
               
52-303
               

               
Cow position:
               
chr5:10790362-10790113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
172, 21
               

               
Conread position:
               
55-394
               

               
Cow position:
               
chr5:8787266-8786927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
168, 18
               

               
Conread position:
               
56-303
               

               
Cow position:
               
chr5:24126502-24126255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
116, 17
               

               
Conread position:
               
59-293
               

               
Cow position:
               
chr5:16508447-16508681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
111, 14
               

               
Conread position:
               
61-297
               

               
Cow position:
               
chr5:53406198-53405964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
163, 12
               

               
Conread position:
               
61-303
               

               
Cow position:
               
chr5:31470212-31469969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
109, 13
               

               
Conread position:
               
61-303
               

               
Cow position:
               
chr5:37436504-37436746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
111, 12
               

               
Conread position:
               
61-397
               

               
Cow position:
               
chr5:48546686-48547015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
41, 12
               

               
Conread position:
               
61-489
               

               
Cow position:
               
chr5:9001975-9001549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
109, 5
               

               
Conread position:
               
61-508
               

               
Cow position:
               
chr5:21187124-21187570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
106, 12
               

               
Conread position:
               
61-626
               

               
Cow position:
               
chr5:9488596-9488024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
68, 5
               

               
Conread position:
               
61-638
               

               
Cow position:
               
chr5:8202882-8203435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
174, 12
               

               
Conread position:
               
62-257
               

               
Cow position:
               
chr5:75558921-75559118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
11, 155
               

               
Conread position:
               
64-303
               

               
Cow position:
               
chr5:11834787-11834549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
168, 100
               

               
Conread position:
               
66-293
               

               
Cow position:
               
chr5:7514875-7515092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
158, 67
               

               
Conread position:
               
66-593
               

               
Cow position:
               
chr5:51293361-51292837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
237, 27
               

               
Conread position:
               
67-516
               

               
Cow position:
               
chr5:48535191-48535632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
165, 67
               

               
Conread position:
               
67-563
               

               
Cow position:
               
chr5:56271743-56271245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
105, 97
               

               
Conread position:
               
67-624
               

               
Cow position:
               
chr5:19211385-19210795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 368
               

               
Conread position:
               
68-277
               

               
Cow position:
               
chr5:1639063-1639273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
102, 96
               

               
Conread position:
               
69-305
               

               
Cow position:
               
chr5:60371646-60371415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
163, 93
               

               
Conread position:
               
71-283
               

               
Cow position:
               
chr5:40233315-40233527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
161, 114
               

               
Conread position:
               
71-696
               

               
Cow position:
               
chr5:64615374-64616017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
658
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 304
               

               
Conread position:
               
72-563
               

               
Cow position:
               
chr5:47055551-47055058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
100, 92
               

               
Conread position:
               
73-563
               

               
Cow position:
               
chr5:27461671-27461179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
97, 91
               

               
Conread position:
               
75-626
               

               
Cow position:
               
chr5:39195859-39195317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 38
               

               
Conread position:
               
75-696
               

               
Cow position:
               
chr5:61101629-61102251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
647
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
157, 9
               

               
Conread position:
               
76-297
               

               
Cow position:
               
chr5:23673513-23673291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
76-303
               

               
Cow position:
               
chr5:15376208-15376435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
148, 138
               

               
Conread position:
               
76-303
               

               
Cow position:
               
chr5:19130924-19131152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
97, 91
               

               
Conread position:
               
77-620
               

               
Cow position:
               
chr5:7065722-7066264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
223, 90
               

               
Conread position:
               
78-694
               

               
Cow position:
               
chr5:3446811-3446212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 73
               

               
Conread position:
               
81-277
               

               
Cow position:
               
chr5:2333150-2332953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
81-651
               

               
Cow position:
               
chr5:4438070-4438636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
143, 344
               

               
Conread position:
               
82-516
               

               
Cow position:
               
chr5:28247560-28248001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
91, 76
               

               
Conread position:
               
82-563
               

               
Cow position:
               
chr5:37736070-37736555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
88, 55
               

               
Conread position:
               
83-300
               

               
Cow position:
               
chr5:58353789-58354007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
71, 87
               

               
Conread position:
               
83-673
               

               
Cow position:
               
chr5:33865561-33864973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
87, 33
               

               
Conread position:
               
85-633
               

               
Cow position:
               
chr5:58732187-58731655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 80
               

               
Conread position:
               
85-695
               

               
Cow position:
               
chr5:14906429-14905811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 77
               

               
Conread position:
               
86-301
               

               
Cow position:
               
chr5:9090619-9090402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
84, 78
               

               
Conread position:
               
86-301
               

               
Cow position:
               
chr5:57783063-57783282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
81, 21
               

               
Conread position:
               
86-497
               

               
Cow position:
               
chr5:41523398-41522987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
78, 86
               

               
Conread position:
               
86-516
               

               
Cow position:
               
chr5:64844731-64844293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
64, 73
               

               
Conread position:
               
87-299
               

               
Cow position:
               
chr5:21784373-21784161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
150, 119
               

               
Conread position:
               
89-652
               

               
Cow position:
               
chr5:42232320-42231753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
134, 248
               

               
Conread position:
               
90-397
               

               
Cow position:
               
chr5:65179448-65179767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
134, 29
               

               
Conread position:
               
90-563
               

               
Cow position:
               
chr5:24086287-24085815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
11, 75
               

               
Conread position:
               
94-301
               

               
Cow position:
               
chr5:50900249-50900449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
134, 68
               

               
Conread position:
               
95-303
               

               
Cow position:
               
chr5:67422627-67422419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
18, 8
               

               
Conread position:
               
96-350
               

               
Cow position:
               
chr5:37459727-37459991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
128, 148
               

               
Conread position:
               
96-408
               

               
Cow position:
               
chr5:74029128-74029444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
136, 148
               

               
Conread position:
               
96-563
               

               
Cow position:
               
chr5:26075271-26074803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
76, 68
               

               
Conread position:
               
96-592
               

               
Cow position:
               
chr5:32391166-32390673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
33, 20
               

               
Conread position:
               
96-655
               

               
Cow position:
               
chr5:67623536-67624093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
130, 45
               

               
Conread position:
               
97-283
               

               
Cow position:
               
chr5:28946901-28946715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
135, 101
               

               
Conread position:
               
97-301
               

               
Cow position:
               
chr5:30302296-30302501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
67, 73
               

               
Conread position:
               
97-302
               

               
Cow position:
               
chr5:3441846-3442053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
97-303
               

               
Cow position:
               
chr5:23745381-23745174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
76, 106
               

               
Conread position:
               
97-563
               

               
Cow position:
               
chr5:2428325-2427861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
73, 67
               

               
Conread position:
               
98-296
               

               
Cow position:
               
chr5:17961366-17961169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
126, 10
               

               
Conread position:
               
98-516
               

               
Cow position:
               
chr5:4166075-4166496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
139, 25
               

               
Conread position:
               
98-597
               

               
Cow position:
               
chr5:24925235-24925732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 15
               

               
Conread position:
               
98-687
               

               
Cow position:
               
chr5:28930776-28931361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 126
               

               
Conread position:
               
99-297
               

               
Cow position:
               
chr5:30285126-30284928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
59, 17
               

               
Conread position:
               
100-563
               

               
Cow position:
               
chr5:18072489-18072026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
138, 64
               

               
Conread position:
               
101-385
               

               
Cow position:
               
chr5:74283007-74282709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
104-670
               

               
Cow position:
               
chr5:69448597-69448004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 12
               

               
Conread position:
               
106-616
               

               
Cow position:
               
chr5:40050543-40050034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 57
               

               
Conread position:
               
110-677
               

               
Cow position:
               
chr5:31975785-31976337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
10, 61
               

               
Conread position:
               
115-460
               

               
Cow position:
               
chr5:42201988-42202333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
45, 109
               

               
Conread position:
               
116-297
               

               
Cow position:
               
chr5:19011280-19011097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
119-303
               

               
Cow position:
               
chr5:3809969-3810154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
19, 38
               

               
Conread position:
               
119-653
               

               
Cow position:
               
chr5:49776064-49776594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
107, 55
               

               
Conread position:
               
129-665
               

               
Cow position:
               
chr5:63828253-63827714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
65, 33
               

               
Conread position:
               
130-496
               

               
Cow position:
               
chr5:29599890-29600261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
115, 72
               

               
Conread position:
               
131-401
               

               
Cow position:
               
chr5:69035727-69035451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
100, 128
               

               
Conread position:
               
134-692
               

               
Cow position:
               
chr5:28699504-28698943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 55
               

               
Conread position:
               
150-302
               

               
Cow position:
               
chr5:22890684-22890534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
25, 102
               

               
Conread position:
               
153-388
               

               
Cow position:
               
chr5:59711791-59712035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
80, 227
               

               
Conread position:
               
153-651
               

               
Cow position:
               
chr5:51876792-51877303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 136
               

               
Conread position:
               
154-671
               

               
Cow position:
               
chr5:27100727-27101257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 281
               

               
Conread position:
               
166-394
               

               
Cow position:
               
chr5:60490606-60490371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
46, 130
               

               
Conread position:
               
166-669
               

               
Cow position:
               
chr5:15764873-15765384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
58, 121
               

               
Conread position:
               
170-348
               

               
Cow position:
               
chr5:10035035-10035209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
62, 28
               

               
Conread position:
               
170-393
               

               
Cow position:
               
chr5:25254155-25254393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
170-599
               

               
Cow position:
               
chr5:15088656-15089089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
62, 235
               

               
Conread position:
               
170-653
               

               
Cow position:
               
chr5:33175530-33175999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 209
               

               
Conread position:
               
170-692
               

               
Cow position:
               
chr5:19269776-19269269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
62, 80
               

               
Conread position:
               
170-695
               

               
Cow position:
               
chr5:62272586-62272059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
65, 238
               

               
Conread position:
               
171-583
               

               
Cow position:
               
chr5:41917995-41917583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
61, 87
               

               
Conread position:
               
174-516
               

               
Cow position:
               
chr5:42982489-42982836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
58, 114
               

               
Conread position:
               
174-679
               

               
Cow position:
               
chr5:46597152-46597669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
59, 27
               

               
Conread position:
               
175-397
               

               
Cow position:
               
chr5:31507880-31507646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
57, 179
               

               
Conread position:
               
175-666
               

               
Cow position:
               
chr5:14748290-14747810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
57, 34
               

               
Conread position:
               
176-590
               

               
Cow position:
               
chr5:2709950-2709526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
56, 183
               

               
Conread position:
               
176-672
               

               
Cow position:
               
chr5:2711173-2710668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
56, 183
               

               
Conread position:
               
178-569
               

               
Cow position:
               
chr5:57791564-57791172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
33, 237
               

               
Conread position:
               
178-666
               

               
Cow position:
               
chr5:64630142-64630644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
55, 352
               

               
Conread position:
               
179-587
               

               
Cow position:
               
chr5:33962547-33962963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
47, 39
               

               
Conread position:
               
181-679
               

               
Cow position:
               
chr5:60410566-60411053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
57, 20
               

               
Conread position:
               
186-696
               

               
Cow position:
               
chr5:62341387-62341904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
46, 228
               

               
Conread position:
               
194-696
               

               
Cow position:
               
chr5:45602273-45601756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 258
               

               
Conread position:
               
213-638
               

               
Cow position:
               
chr5:16959942-16959514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
19, 44
               

               
Conread position:
               
217-696
               

               
Cow position:
               
chr5:33150202-33150697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
15, 85
               

               
Conread position:
               
220-688
               

               
Cow position:
               
chr5:30359736-30359267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
12, 216
               

               
Conread position:
               
223-696
               

               
Cow position:
               
chr5:40614487-40614002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
7, 206
               

               
Conread position:
               
231-492
               

               
Cow position:
               
chr5:60669429-60669695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
72, 27
               

               
Conread position:
               
231-582
               

               
Cow position:
               
chr5:48062864-48062509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
26, 13
               

               
Conread position:
               
231-694
               

               
Cow position:
               
chr5:70631443-70630981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
71, 120
               

               
Conread position:
               
251-692
               

               
Cow position:
               
chr5:18478977-18479430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
54, 216
               

               
Conread position:
               
252-479
               

               
Cow position:
               
chr5:64841927-64841692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
41, 76
               

               
Conread position:
               
252-690
               

               
Cow position:
               
chr5:48244635-48245073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
50, 114
               

               
Conread position:
               
253-691
               

               
Cow position:
               
chr5:47087199-47087627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
33, 96
               

               
Conread position:
               
259-696
               

               
Cow position:
               
chr5:30308095-30308519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
46, 102
               

               
Conread position:
               
261-653
               

               
Cow position:
               
chr5:40672940-40673336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
24, 186
               

               
Conread position:
               
266-696
               

               
Cow position:
               
chr5:24912056-24912497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
39, 140
               

               
Conread position:
               
268-696
               

               
Cow position:
               
chr5:46865541-46865115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
35, 78
               

               
Conread position:
               
293-655
               

               
Cow position:
               
chr5:4084479-4084123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
45, 56
               

               
Conread position:
               
302-693
               

               
Cow position:
               
chr5:35444473-35444864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
36, 132
               

               
Conread position:
               
302-696
               

               
Cow position:
               
chr5:15795643-15796019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
30, 97
               

               
Conread position:
               
302-696
               

               
Cow position:
               
chr5:65054075-65054471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
42, 111
               

               
Conread position:
               
303-693
               

               
Cow position:
               
chr5:62268193-62268579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 118
               

               
Conread position:
               
303-696
               

               
Cow position:
               
chr5:41019943-41019547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
32, 110
               

               
Conread position:
               
308-656
               

               
Cow position:
               
chr5:32643271-32643618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
64, 135
               

               
Conread position:
               
309-696
               

               
Cow position:
               
chr5:5881131-5880747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 112
               

               
Conread position:
               
312-695
               

               
Cow position:
               
chr5:64747831-64747453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
28, 105
               

               
Conread position:
               
313-678
               

               
Cow position:
               
chr5:15624193-15624542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
29, 87
               

               
Conread position:
               
315-696
               

               
Cow position:
               
chr5:5526965-5526579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
24, 125
               

               
Conread position:
               
320-663
               

               
Cow position:
               
chr5:40509961-40509623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
22, 105
               

               
Conread position:
               
320-696
               

               
Cow position:
               
chr5:22890468-22890100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
20, 114
               

               
Conread position:
               
322-634
               

               
Cow position:
               
chr5:52907868-52908177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
55, 19
               

               
Conread position:
               
322-694
               

               
Cow position:
               
chr5:3467334-3466963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
18, 117
               

               
Conread position:
               
325-645
               

               
Cow position:
               
chr5:33251132-33250821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
14, 30
               

               
Conread position:
               
328-696
               

               
Cow position:
               
chr5:31008210-31008562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
12, 82
               

               
Conread position:
               
332-679
               

               
Cow position:
               
chr5:19860001-19859664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
38, 64
               

               
Conread position:
               
354-670
               

               
Cow position:
               
chr5:24539284-24538975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
22, 45
               

               
Conread position:
               
374-671
               

               
Cow position:
               
chr5:68364976-68364693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
172, 22
               

               
Conread position:
               
374-696
               

               
Cow position:
               
chr5:68887020-68887342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
18, 61
               

               
Conread position:
               
375-621
               

               
Cow position:
               
chr5:35320312-35320078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
21, 45
               

               
Conread position:
               
376-692
               

               
Cow position:
               
chr5:20383339-20383646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
159, 16
               

               
Conread position:
               
427-689
               

               
Cow position:
               
chr5:22133071-22133323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
119, 6
               

               
Conread position:
               
428-621
               

               
Cow position:
               
chr5:62178250-62178440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
166, 5
               

               
Conread position:
               
428-649
               

               
Cow position:
               
chr5:35339184-35339396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
45, 7
               

               
Conread position:
               
428-652
               

               
Cow position:
               
chr5:62278489-62278709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
27, 5
               

               
Conread position:
               
433-683
               

               
Cow position:
               
chr5:32940842-32941085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
57, 11
               

               
Conread position:
               
433-696
               

               
Cow position:
               
chr5:45610806-45610551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
12, 53
               

               
Conread position:
               
434-652
               

               
Cow position:
               
chr5:42344904-42344697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
101, 76
               

               
Conread position:
               
437-696
               

               
Cow position:
               
chr5:43451601-43451850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
109, 44
               

               
Conread position:
               
439-696
               

               
Cow position:
               
chr5:70910724-70910474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
109, 76
               

               
Conread position:
               
440-692
               

               
Cow position:
               
chr5:51886933-51887178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
106, 78
               

               
Conread position:
               
442-648
               

               
Cow position:
               
chr5:44437536-44437338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
104, 22
               

               
Conread position:
               
444-678
               

               
Cow position:
               
chr5:44575837-44576070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
102, 77
               

               
Conread position:
               
446-684
               

               
Cow position:
               
chr5:69879272-69879503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
100, 57
               

               
Conread position:
               
448-654
               

               
Cow position:
               
chr5:54608876-54609079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
65, 37
               

               
Conread position:
               
451-655
               

               
Cow position:
               
chr5:62385022-62385219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
99, 59
               

               
Conread position:
               
451-678
               

               
Cow position:
               
chr5:40649609-40649830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
95, 58
               

               
Conread position:
               
451-692
               

               
Cow position:
               
chr5:51192421-51192654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
203, 66
               

               
Conread position:
               
452-638
               

               
Cow position:
               
chr5:5988926-5989110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
44, 31
               

               
Conread position:
               
455-678
               

               
Cow position:
               
chr5:39792174-39791957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
91, 54
               

               
Conread position:
               
456-693
               

               
Cow position:
               
chr5:56904298-56904531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
94, 57
               

               
Conread position:
               
463-695
               

               
Cow position:
               
chr5:62608976-62609201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
83, 47
               

               
Conread position:
               
478-691
               

               
Cow position:
               
chr5:39755987-39755781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
68, 39
               

               
Conread position:
               
505-695
               

               
Cow position:
               
chr5:51052602-51052789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
41, 79
               

               
Conread position:
               
515-667
               

               
Cow position:
               
chr5:24527166-24527015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
31, 66
               

               
Conread position:
               
524-696
               

               
Cow position:
               
chr5:41201257-41201086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
22, 38
               

               
Conread position:
               
534-694
               

               
Cow position:
               
chr5:52226135-52225973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               
Show alignments to all cow chromosomes.