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Cow genome map

           
Conread name:
           
Ss1.1-ruio02_j18.5.5
        

               
Conread position:
               
1-221
               

               
Cow position:
               
chr6:21693746-21693968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
38, 68
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr6:35825510-35825780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
38, 58
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr6:55345855-55345566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
41, 77
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr6:45161067-45160768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
156, 66
               

               
Conread position:
               
1-303
               

               
Cow position:
               
chr6:9468996-9469280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
287, 32
               

               
Conread position:
               
1-303
               

               
Cow position:
               
chr6:41192811-41193116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
41, 75
               

               
Conread position:
               
1-369
               

               
Cow position:
               
chr6:48248599-48248984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
43, 75
               

               
Conread position:
               
1-390
               

               
Cow position:
               
chr6:16132459-16132872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
39, 78
               

               
Conread position:
               
1-390
               

               
Cow position:
               
chr6:44869837-44869440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
34, 78
               

               
Conread position:
               
1-396
               

               
Cow position:
               
chr6:55845279-55845680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
39, 75
               

               
Conread position:
               
1-407
               

               
Cow position:
               
chr6:35710714-35711126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
42, 76
               

               
Conread position:
               
1-479
               

               
Cow position:
               
chr6:43049476-43049963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
41, 75
               

               
Conread position:
               
1-499
               

               
Cow position:
               
chr6:30076807-30076294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
42, 75
               

               
Conread position:
               
1-563
               

               
Cow position:
               
chr6:50526973-50527535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
32, 77
               

               
Conread position:
               
1-646
               

               
Cow position:
               
chr6:14805780-14806403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
657
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 109
               

               
Conread position:
               
1-654
               

               
Cow position:
               
chr6:6817068-6817719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
678
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 100
               

               
Conread position:
               
1-689
               

               
Cow position:
               
chr6:40692324-40691659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
709
               

               
Alignm identity:
               
453
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
42, 65
               

               
Conread position:
               
1-692
               

               
Cow position:
               
chr6:41317712-41317041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
704
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 76
               

               
Conread position:
               
2-126
               

               
Cow position:
               
chr6:10503402-10503276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
36, 68
               

               
Conread position:
               
2-137
               

               
Cow position:
               
chr6:42761210-42761073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-149
               

               
Cow position:
               
chr6:31530055-31530206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
19, 76
               

               
Conread position:
               
2-151
               

               
Cow position:
               
chr6:3987591-3987440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 74
               

               
Conread position:
               
2-160
               

               
Cow position:
               
chr6:4505741-4505901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
44, 74
               

               
Conread position:
               
2-160
               

               
Cow position:
               
chr6:17386988-17387148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-160
               

               
Cow position:
               
chr6:17773168-17773008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-160
               

               
Cow position:
               
chr6:34386754-34386594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-160
               

               
Cow position:
               
chr6:34405792-34405952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-160
               

               
Cow position:
               
chr6:48882208-48882368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-161
               

               
Cow position:
               
chr6:61071872-61071710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
40, 26
               

               
Conread position:
               
2-165
               

               
Cow position:
               
chr6:49391873-49391708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
40, 67
               

               
Conread position:
               
2-189
               

               
Cow position:
               
chr6:65943356-65943545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-198
               

               
Cow position:
               
chr6:34273400-34273207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
44, 73
               

               
Conread position:
               
2-209
               

               
Cow position:
               
chr6:14897647-14897855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-209
               

               
Cow position:
               
chr6:34843226-34843017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-209
               

               
Cow position:
               
chr6:51150407-51150616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-218
               

               
Cow position:
               
chr6:12406689-12406906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
40, 176
               

               
Conread position:
               
2-227
               

               
Cow position:
               
chr6:25436301-25436073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-231
               

               
Cow position:
               
chr6:55361330-55361098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-233
               

               
Cow position:
               
chr6:33808969-33808736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
38, 74
               

               
Conread position:
               
2-234
               

               
Cow position:
               
chr6:54979064-54978830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-235
               

               
Cow position:
               
chr6:8535333-8535099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
40, 30
               

               
Conread position:
               
2-235
               

               
Cow position:
               
chr6:24125938-24125706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
39, 76
               

               
Conread position:
               
2-235
               

               
Cow position:
               
chr6:42897653-42897890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
36, 166
               

               
Conread position:
               
2-242
               

               
Cow position:
               
chr6:35884273-35884516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
31, 73
               

               
Conread position:
               
2-242
               

               
Cow position:
               
chr6:39912787-39913030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-244
               

               
Cow position:
               
chr6:3484954-3484710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
38, 74
               

               
Conread position:
               
2-252
               

               
Cow position:
               
chr6:12099889-12100138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
40, 18
               

               
Conread position:
               
2-252
               

               
Cow position:
               
chr6:60813967-60813715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
44, 62
               

               
Conread position:
               
2-257
               

               
Cow position:
               
chr6:54472187-54471926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-262
               

               
Cow position:
               
chr6:28978032-28977770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-263
               

               
Cow position:
               
chr6:32070028-32069774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
36, 26
               

               
Conread position:
               
2-263
               

               
Cow position:
               
chr6:51191091-51191355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
41, 75
               

               
Conread position:
               
2-268
               

               
Cow position:
               
chr6:7112249-7111982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr6:46225500-46225228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-276
               

               
Cow position:
               
chr6:2110943-2110673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
168, 40
               

               
Conread position:
               
2-276
               

               
Cow position:
               
chr6:28401110-28401387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
40, 67
               

               
Conread position:
               
2-276
               

               
Cow position:
               
chr6:42274659-42274925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
40, 84
               

               
Conread position:
               
2-276
               

               
Cow position:
               
chr6:48579255-48578981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
230, 71
               

               
Conread position:
               
2-276
               

               
Cow position:
               
chr6:53930119-53929845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
39, 74
               

               
Conread position:
               
2-276
               

               
Cow position:
               
chr6:55538806-55538533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
35, 74
               

               
Conread position:
               
2-276
               

               
Cow position:
               
chr6:56858725-56858996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr6:126670-126392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr6:1245456-1245178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr6:6278252-6278523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
170, 65
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr6:8753990-8753715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr6:12662857-12662590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr6:13307933-13307655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr6:26324735-26324458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr6:34494137-34494411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr6:37388031-37388309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr6:44146484-44146208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
40, 61
               

               
Conread position:
               
2-280
               

               
Cow position:
               
chr6:28112373-28112092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
36, 74
               

               
Conread position:
               
2-286
               

               
Cow position:
               
chr6:3544959-3545240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
40, 55
               

               
Conread position:
               
2-286
               

               
Cow position:
               
chr6:4274510-4274792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-286
               

               
Cow position:
               
chr6:31880322-31880036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
40, 13
               

               
Conread position:
               
2-289
               

               
Cow position:
               
chr6:13494628-13494338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-289
               

               
Cow position:
               
chr6:34548494-34548777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
209, 65
               

               
Conread position:
               
2-289
               

               
Cow position:
               
chr6:58036748-58037035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-293
               

               
Cow position:
               
chr6:529387-529097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
40, 11
               

               
Conread position:
               
2-293
               

               
Cow position:
               
chr6:27365632-27365926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
40, 73
               

               
Conread position:
               
2-293
               

               
Cow position:
               
chr6:59596717-59597014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
11, 76
               

               
Conread position:
               
2-296
               

               
Cow position:
               
chr6:19145623-19145346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
37, 63
               

               
Conread position:
               
2-297
               

               
Cow position:
               
chr6:6119537-6119241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
167, 65
               

               
Conread position:
               
2-297
               

               
Cow position:
               
chr6:10253243-10253535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-297
               

               
Cow position:
               
chr6:12927033-12927331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-297
               

               
Cow position:
               
chr6:13591777-13592076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
37, 74
               

               
Conread position:
               
2-297
               

               
Cow position:
               
chr6:33301133-33301431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-297
               

               
Cow position:
               
chr6:65538805-65539094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
37, 74
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr6:4681073-4681364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr6:10044671-10044970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr6:55239155-55239454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-299
               

               
Cow position:
               
chr6:17932397-17932692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
35, 75
               

               
Conread position:
               
2-299
               

               
Cow position:
               
chr6:34075334-34075641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
40, 67
               

               
Conread position:
               
2-299
               

               
Cow position:
               
chr6:64031691-64031410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
174, 24
               

               
Conread position:
               
2-300
               

               
Cow position:
               
chr6:38988359-38988059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 67
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr6:208466-208765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
26, 77
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr6:224034-223732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
39, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr6:451798-451497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr6:539602-539903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
40, 21
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr6:889022-889322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
37, 54
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr6:1835887-1836182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 67
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr6:4468086-4468377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
40, 68
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr6:6200794-6201096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr6:8210266-8209964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr6:9839663-9839363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
36, 68
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr6:10536514-10536212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr6:11466599-11466305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
45, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr6:17602941-17602645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
33, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr6:19328521-19328224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
11, 28
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr6:19719033-19719337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
40, 30
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr6:20328820-20329124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
40, 21
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr6:22017711-22017413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
40, 62
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr6:24583937-24583625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
36, 72
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr6:28476483-28476784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr6:28674993-28675295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr6:29084925-29084633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr6:30704840-30705142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr6:33296715-33297010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
39, 45
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr6:35206269-35205986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
41, 73
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr6:37217104-37217406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr6:39109902-39109610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
39, 23
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr6:39897598-39897296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr6:40139821-40139529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
40, 69
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr6:40496894-40497188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
35, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr6:41495372-41495071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr6:45479623-45479321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr6:46293014-46292708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr6:46570443-46570743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
38, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr6:49411359-49411062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
36, 11
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr6:51879193-51879491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
212, 65
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr6:52557158-52556856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr6:53461705-53461405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
37, 73
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr6:53537541-53537843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr6:54865878-54865577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr6:54900554-54900856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr6:55944973-55944676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
59, 31
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr6:56557147-56556845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr6:57329743-57330045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
38, 74
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr6:57681064-57680770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
163, 40
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr6:63252593-63252282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
36, 75
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr6:64314717-64314416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
36, 93
               

               
Conread position:
               
2-302
               

               
Cow position:
               
chr6:32420405-32420708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
36, 68
               

               
Conread position:
               
2-302
               

               
Cow position:
               
chr6:33466422-33466722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr6:1797090-1797394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr6:1817549-1817246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr6:1834460-1834763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr6:1887326-1887028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
168, 40
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr6:2366812-2366526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
79, 44
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr6:3272018-3271712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
40, 67
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr6:5946310-5946006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr6:6568769-6568465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr6:6613751-6614059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
30, 85
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr6:7467186-7466882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr6:10598453-10598748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr6:11389149-11388845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
38, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr6:12387997-12387706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr6:14928915-14929213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
230, 65
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr6:16049828-16049527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
40, 61
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr6:16593413-16593713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
36, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr6:17111701-17111397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr6:17121854-17122158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr6:17344664-17344964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr6:17632305-17632001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr6:20451424-20451725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
40, 73
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr6:20515043-20515344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
170, 71
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr6:21832195-21831891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
28, 72
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr6:24623677-24623377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
41, 11
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr6:28065455-28065756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
36, 68
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr6:28136203-28136507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr6:33949698-33949396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
40, 14
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr6:34504059-34503756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr6:35873267-35872966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
96, 14
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr6:38873063-38872759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr6:39331068-39330763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
40, 61
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr6:40319725-40320029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr6:40550237-40549932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
129, 40
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr6:40813826-40814130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr6:43789903-43789601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
44, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr6:44598586-44598282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr6:46948280-46948581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
37, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr6:47039746-47039442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr6:47383050-47383354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr6:47977399-47977699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
170, 71
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr6:49444580-49444887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
41, 67
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr6:51733546-51733850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
37, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr6:57308689-57308990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr6:60379628-60379932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr6:65016576-65016270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
39, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr6:65921290-65920990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr6:68030910-68031215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-304
               

               
Cow position:
               
chr6:7137877-7137572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-304
               

               
Cow position:
               
chr6:14199510-14199812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
41, 14
               

               
Conread position:
               
2-304
               

               
Cow position:
               
chr6:62333283-62332981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
47, 75
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr6:29239029-29239335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
36, 58
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr6:42481346-42481654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-313
               

               
Cow position:
               
chr6:41410066-41410380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-322
               

               
Cow position:
               
chr6:44494679-44494992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
29, 68
               

               
Conread position:
               
2-322
               

               
Cow position:
               
chr6:63177508-63177831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-346
               

               
Cow position:
               
chr6:56635996-56635642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
40, 75
               

               
Conread position:
               
2-364
               

               
Cow position:
               
chr6:6120964-6120597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
41, 14
               

               
Conread position:
               
2-370
               

               
Cow position:
               
chr6:48473148-48473521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
230, 44
               

               
Conread position:
               
2-370
               

               
Cow position:
               
chr6:53211985-53211628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
230, 71
               

               
Conread position:
               
2-386
               

               
Cow position:
               
chr6:7755483-7755091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 71
               

               
Conread position:
               
2-390
               

               
Cow position:
               
chr6:828366-827966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-390
               

               
Cow position:
               
chr6:4389177-4389576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-390
               

               
Cow position:
               
chr6:14148043-14148453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
41, 55
               

               
Conread position:
               
2-390
               

               
Cow position:
               
chr6:58951024-58950632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
38, 74
               

               
Conread position:
               
2-396
               

               
Cow position:
               
chr6:7049456-7049849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
26, 41
               

               
Conread position:
               
2-399
               

               
Cow position:
               
chr6:55386918-55387325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
42, 73
               

               
Conread position:
               
2-407
               

               
Cow position:
               
chr6:7817015-7817423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
9, 22
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr6:46283640-46283181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-460
               

               
Cow position:
               
chr6:3118929-3118452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
33, 75
               

               
Conread position:
               
2-461
               

               
Cow position:
               
chr6:47574253-47574720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
36, 74
               

               
Conread position:
               
2-469
               

               
Cow position:
               
chr6:479011-479488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-474
               

               
Cow position:
               
chr6:6459574-6460056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
40, 124
               

               
Conread position:
               
2-474
               

               
Cow position:
               
chr6:40158073-40157586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 76
               

               
Conread position:
               
2-477
               

               
Cow position:
               
chr6:67553697-67554180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
40, 67
               

               
Conread position:
               
2-478
               

               
Cow position:
               
chr6:50973833-50973356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
35, 74
               

               
Conread position:
               
2-479
               

               
Cow position:
               
chr6:55903553-55904035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
14, 75
               

               
Conread position:
               
2-489
               

               
Cow position:
               
chr6:16418226-16417729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-489
               

               
Cow position:
               
chr6:18463084-18462588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
230, 43
               

               
Conread position:
               
2-489
               

               
Cow position:
               
chr6:21712171-21712668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-489
               

               
Cow position:
               
chr6:60876760-60877257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-489
               

               
Cow position:
               
chr6:63040868-63040373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-489
               

               
Cow position:
               
chr6:65909790-65910287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
40, 67
               

               
Conread position:
               
2-490
               

               
Cow position:
               
chr6:9234977-9235475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-490
               

               
Cow position:
               
chr6:18803594-18803096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-490
               

               
Cow position:
               
chr6:19706894-19707392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-490
               

               
Cow position:
               
chr6:19712780-19712287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-490
               

               
Cow position:
               
chr6:25374643-25374145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-490
               

               
Cow position:
               
chr6:26667560-26667061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-490
               

               
Cow position:
               
chr6:26771657-26771158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-490
               

               
Cow position:
               
chr6:26829992-26830490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-490
               

               
Cow position:
               
chr6:28701100-28700602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-490
               

               
Cow position:
               
chr6:40278516-40279015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-490
               

               
Cow position:
               
chr6:45747543-45747044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
39, 74
               

               
Conread position:
               
2-490
               

               
Cow position:
               
chr6:59834549-59835041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-490
               

               
Cow position:
               
chr6:63714811-63714327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-491
               

               
Cow position:
               
chr6:327898-327400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-491
               

               
Cow position:
               
chr6:11869470-11868973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
40, 67
               

               
Conread position:
               
2-491
               

               
Cow position:
               
chr6:28160874-28161370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-491
               

               
Cow position:
               
chr6:40358414-40357913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
16, 75
               

               
Conread position:
               
2-491
               

               
Cow position:
               
chr6:40975629-40976127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
14, 75
               

               
Conread position:
               
2-491
               

               
Cow position:
               
chr6:51718022-51718519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
40, 14
               

               
Conread position:
               
2-491
               

               
Cow position:
               
chr6:51869402-51869899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-493
               

               
Cow position:
               
chr6:366531-367032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-493
               

               
Cow position:
               
chr6:28487196-28486695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
35, 74
               

               
Conread position:
               
2-493
               

               
Cow position:
               
chr6:52001693-52002185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-494
               

               
Cow position:
               
chr6:46162198-46161708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-494
               

               
Cow position:
               
chr6:48568026-48567525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
35, 73
               

               
Conread position:
               
2-495
               

               
Cow position:
               
chr6:2087982-2088481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
44, 65
               

               
Conread position:
               
2-495
               

               
Cow position:
               
chr6:9737799-9737295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-495
               

               
Cow position:
               
chr6:11193116-11192634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
40, 165
               

               
Conread position:
               
2-496
               

               
Cow position:
               
chr6:28342968-28343468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
38, 68
               

               
Conread position:
               
2-509
               

               
Cow position:
               
chr6:35238688-35238186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
42, 73
               

               
Conread position:
               
2-512
               

               
Cow position:
               
chr6:60456143-60456665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
41, 21
               

               
Conread position:
               
2-515
               

               
Cow position:
               
chr6:32211303-32210789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
168, 40
               

               
Conread position:
               
2-516
               

               
Cow position:
               
chr6:16699599-16700098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
36, 68
               

               
Conread position:
               
2-516
               

               
Cow position:
               
chr6:16737338-16737859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
41, 75
               

               
Conread position:
               
2-516
               

               
Cow position:
               
chr6:42420583-42421100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
38, 74
               

               
Conread position:
               
2-516
               

               
Cow position:
               
chr6:51674231-51674757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-534
               

               
Cow position:
               
chr6:46666423-46666958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
41, 18
               

               
Conread position:
               
2-541
               

               
Cow position:
               
chr6:39080382-39080931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-561
               

               
Cow position:
               
chr6:444463-443900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-562
               

               
Cow position:
               
chr6:23568128-23567579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-562
               

               
Cow position:
               
chr6:28000931-28000369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
36, 68
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr6:76976-76412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr6:182088-181513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
40, 175
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr6:1406687-1406123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
35, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr6:2875569-2875015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr6:3152680-3153243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
170, 59
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr6:7448960-7449525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
37, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr6:8205652-8206216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr6:11020123-11020688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr6:11401785-11402349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
40, 67
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr6:11453402-11452837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
36, 68
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr6:12971861-12972426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr6:12997885-12998446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
41, 60
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr6:16410522-16411075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 71
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr6:18912270-18911704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr6:19103443-19102877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr6:20215931-20215366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr6:20581311-20580749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 71
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr6:21163768-21164333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr6:22043545-22042983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
40, 58
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr6:22737241-22736680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr6:23879594-23879029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr6:27094122-27093558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
38, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr6:27173306-27173871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr6:28184856-28184291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr6:33884619-33884053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr6:34017259-34016693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr6:36258419-36258984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr6:36901475-36902040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr6:38917575-38917009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr6:40251335-40250775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr6:41158856-41158291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr6:41823372-41822807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
38, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr6:41834766-41835330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr6:43921101-43921666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr6:45723660-45723087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr6:45937744-45938309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr6:45975964-45976529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr6:46608042-46607479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr6:57521640-57522205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr6:59051883-59052448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr6:61051658-61051093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr6:61549262-61548697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr6:62665240-62665806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-564
               

               
Cow position:
               
chr6:47154858-47155423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
44, 73
               

               
Conread position:
               
2-569
               

               
Cow position:
               
chr6:12307014-12307576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
41, 75
               

               
Conread position:
               
2-585
               

               
Cow position:
               
chr6:15275775-15275189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-611
               

               
Cow position:
               
chr6:15991478-15990874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-638
               

               
Cow position:
               
chr6:17887570-17886927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
662
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 76
               

               
Conread position:
               
2-638
               

               
Cow position:
               
chr6:38797610-38798252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
666
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
2-653
               

               
Cow position:
               
chr6:24045087-24044434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
667
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 74
               

               
Conread position:
               
2-664
               

               
Cow position:
               
chr6:15471349-15470681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
683
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
29, 94
               

               
Conread position:
               
2-665
               

               
Cow position:
               
chr6:65011628-65012262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
680
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
36, 69
               

               
Conread position:
               
2-666
               

               
Cow position:
               
chr6:21584445-21583770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
692
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 30
               

               
Conread position:
               
2-676
               

               
Cow position:
               
chr6:8145560-8144879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
700
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-687
               

               
Cow position:
               
chr6:12506246-12505583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
707
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
45, 73
               

               
Conread position:
               
2-688
               

               
Cow position:
               
chr6:1734196-1733516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
704
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-688
               

               
Cow position:
               
chr6:10337715-10337043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
712
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
37, 63
               

               
Conread position:
               
2-692
               

               
Cow position:
               
chr6:38596201-38596852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
707
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 58
               

               
Conread position:
               
3-145
               

               
Cow position:
               
chr6:54377016-54377160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
40, 73
               

               
Conread position:
               
3-210
               

               
Cow position:
               
chr6:44905854-44906064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
32, 7
               

               
Conread position:
               
3-210
               

               
Cow position:
               
chr6:48947180-48946977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
36, 72
               

               
Conread position:
               
3-243
               

               
Cow position:
               
chr6:39301652-39301407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
40, 77
               

               
Conread position:
               
3-277
               

               
Cow position:
               
chr6:1096269-1095994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
34, 73
               

               
Conread position:
               
3-277
               

               
Cow position:
               
chr6:2582084-2582352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
229, 39
               

               
Conread position:
               
3-277
               

               
Cow position:
               
chr6:47630649-47630923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
36, 24
               

               
Conread position:
               
3-298
               

               
Cow position:
               
chr6:34437993-34437697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
47, 25
               

               
Conread position:
               
3-298
               

               
Cow position:
               
chr6:57303059-57303349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
37, 73
               

               
Conread position:
               
3-300
               

               
Cow position:
               
chr6:62788487-62788767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
3-301
               

               
Cow position:
               
chr6:61055933-61055621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
35, 127
               

               
Conread position:
               
3-302
               

               
Cow position:
               
chr6:16185869-16186165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
222, 79
               

               
Conread position:
               
3-303
               

               
Cow position:
               
chr6:14851287-14850992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
37, 67
               

               
Conread position:
               
3-303
               

               
Cow position:
               
chr6:29085709-29086011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
39, 73
               

               
Conread position:
               
3-303
               

               
Cow position:
               
chr6:43621485-43621788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
39, 73
               

               
Conread position:
               
3-303
               

               
Cow position:
               
chr6:66234809-66235107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
167, 39
               

               
Conread position:
               
3-390
               

               
Cow position:
               
chr6:34030723-34031101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
40, 73
               

               
Conread position:
               
3-563
               

               
Cow position:
               
chr6:27541027-27541591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
37, 73
               

               
Conread position:
               
3-563
               

               
Cow position:
               
chr6:45901527-45900963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
39, 73
               

               
Conread position:
               
3-579
               

               
Cow position:
               
chr6:56842489-56843055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
38, 73
               

               
Conread position:
               
3-651
               

               
Cow position:
               
chr6:35186644-35187292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
674
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
37, 215
               

               
Conread position:
               
3-679
               

               
Cow position:
               
chr6:29430297-29430968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
702
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 73
               

               
Conread position:
               
3-679
               

               
Cow position:
               
chr6:57967417-57968092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
706
               

               
Alignm identity:
               
460
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 73
               

               
Conread position:
               
4-242
               

               
Cow position:
               
chr6:29484441-29484682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
38, 72
               

               
Conread position:
               
4-262
               

               
Cow position:
               
chr6:17284737-17284478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
35, 53
               

               
Conread position:
               
4-295
               

               
Cow position:
               
chr6:11442506-11442208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
4-301
               

               
Cow position:
               
chr6:34476289-34475991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
38, 72
               

               
Conread position:
               
4-494
               

               
Cow position:
               
chr6:2606927-2607430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
37, 46
               

               
Conread position:
               
4-495
               

               
Cow position:
               
chr6:37643889-37644387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
82, 69
               

               
Conread position:
               
4-498
               

               
Cow position:
               
chr6:16625257-16625768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
35, 72
               

               
Conread position:
               
4-516
               

               
Cow position:
               
chr6:47317215-47317752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 12
               

               
Conread position:
               
4-675
               

               
Cow position:
               
chr6:37761706-37762380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
692
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 74
               

               
Conread position:
               
4-682
               

               
Cow position:
               
chr6:12577886-12578566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
710
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
36, 24
               

               
Conread position:
               
5-283
               

               
Cow position:
               
chr6:53672806-53673089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
37, 75
               

               
Conread position:
               
6-262
               

               
Cow position:
               
chr6:6944509-6944250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
43, 71
               

               
Conread position:
               
6-303
               

               
Cow position:
               
chr6:15137704-15137404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
36, 70
               

               
Conread position:
               
6-470
               

               
Cow position:
               
chr6:35725406-35725885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 70
               

               
Conread position:
               
7-235
               

               
Cow position:
               
chr6:9036422-9036190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
30, 177
               

               
Conread position:
               
7-563
               

               
Cow position:
               
chr6:36531746-36532304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
35, 9
               

               
Conread position:
               
8-269
               

               
Cow position:
               
chr6:47441671-47441416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
224, 65
               

               
Conread position:
               
8-516
               

               
Cow position:
               
chr6:36918837-36918333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
29, 68
               

               
Conread position:
               
9-225
               

               
Cow position:
               
chr6:56377459-56377246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
34, 86
               

               
Conread position:
               
9-258
               

               
Cow position:
               
chr6:28080606-28080362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
29, 65
               

               
Conread position:
               
9-301
               

               
Cow position:
               
chr6:40137933-40137638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
24, 67
               

               
Conread position:
               
9-688
               

               
Cow position:
               
chr6:10425740-10426435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
708
               

               
Alignm identity:
               
459
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 68
               

               
Conread position:
               
10-163
               

               
Cow position:
               
chr6:6743811-6743966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
32, 66
               

               
Conread position:
               
10-233
               

               
Cow position:
               
chr6:64304871-64304647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
28, 64
               

               
Conread position:
               
10-301
               

               
Cow position:
               
chr6:50503055-50503339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
32, 52
               

               
Conread position:
               
10-302
               

               
Cow position:
               
chr6:33921925-33921635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
229, 63
               

               
Conread position:
               
11-256
               

               
Cow position:
               
chr6:8432370-8432613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
159, 15
               

               
Conread position:
               
11-651
               

               
Cow position:
               
chr6:51370439-51371066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
661
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 67
               

               
Conread position:
               
11-679
               

               
Cow position:
               
chr6:8777429-8778078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
681
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 50
               

               
Conread position:
               
12-479
               

               
Cow position:
               
chr6:65844531-65845008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
30, 12
               

               
Conread position:
               
12-626
               

               
Cow position:
               
chr6:61066405-61067027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 66
               

               
Conread position:
               
13-301
               

               
Cow position:
               
chr6:57473731-57474013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
31, 61
               

               
Conread position:
               
13-307
               

               
Cow position:
               
chr6:33359130-33359418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
29, 57
               

               
Conread position:
               
15-496
               

               
Cow position:
               
chr6:28156794-28156298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
24, 61
               

               
Conread position:
               
16-303
               

               
Cow position:
               
chr6:29298696-29298985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
22, 60
               

               
Conread position:
               
18-283
               

               
Cow position:
               
chr6:15181609-15181873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
19, 42
               

               
Conread position:
               
18-563
               

               
Cow position:
               
chr6:2867979-2867430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
24, 58
               

               
Conread position:
               
19-231
               

               
Cow position:
               
chr6:62921893-62921680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
23, 57
               

               
Conread position:
               
19-283
               

               
Cow position:
               
chr6:1104676-1104413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
21, 41
               

               
Conread position:
               
19-286
               

               
Cow position:
               
chr6:44510576-44510844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
23, 59
               

               
Conread position:
               
19-301
               

               
Cow position:
               
chr6:7191145-7190856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
23, 150
               

               
Conread position:
               
19-301
               

               
Cow position:
               
chr6:15783507-15783227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
23, 57
               

               
Conread position:
               
19-322
               

               
Cow position:
               
chr6:39136976-39137278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
140, 54
               

               
Conread position:
               
19-516
               

               
Cow position:
               
chr6:39358997-39358502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
103, 35
               

               
Conread position:
               
19-661
               

               
Cow position:
               
chr6:28053199-28052568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
660
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
203, 40
               

               
Conread position:
               
20-336
               

               
Cow position:
               
chr6:1090335-1090016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
212, 45
               

               
Conread position:
               
21-301
               

               
Cow position:
               
chr6:17326946-17326667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
37, 148
               

               
Conread position:
               
22-490
               

               
Cow position:
               
chr6:43039397-43039875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
20, 54
               

               
Conread position:
               
23-612
               

               
Cow position:
               
chr6:8562063-8562645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
19, 53
               

               
Conread position:
               
24-491
               

               
Cow position:
               
chr6:27526515-27526042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
213, 49
               

               
Conread position:
               
25-301
               

               
Cow position:
               
chr6:8207718-8207993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
147, 14
               

               
Conread position:
               
28-301
               

               
Cow position:
               
chr6:52120583-52120849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
27, 49
               

               
Conread position:
               
28-302
               

               
Cow position:
               
chr6:57756294-57756029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
204, 14
               

               
Conread position:
               
28-303
               

               
Cow position:
               
chr6:43087124-43086845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
14, 48
               

               
Conread position:
               
28-490
               

               
Cow position:
               
chr6:56887903-56888375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
14, 41
               

               
Conread position:
               
28-516
               

               
Cow position:
               
chr6:50120442-50119948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
14, 48
               

               
Conread position:
               
28-563
               

               
Cow position:
               
chr6:14389235-14388696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
14, 48
               

               
Conread position:
               
28-563
               

               
Cow position:
               
chr6:30708706-30708167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
14, 48
               

               
Conread position:
               
28-563
               

               
Cow position:
               
chr6:49794448-49794988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
14, 48
               

               
Conread position:
               
29-297
               

               
Cow position:
               
chr6:66550053-66550320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
98, 44
               

               
Conread position:
               
29-301
               

               
Cow position:
               
chr6:16297998-16298266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
12, 45
               

               
Conread position:
               
29-684
               

               
Cow position:
               
chr6:3449986-3449329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
677
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 30
               

               
Conread position:
               
31-301
               

               
Cow position:
               
chr6:8586401-8586665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
11, 28
               

               
Conread position:
               
33-649
               

               
Cow position:
               
chr6:6166752-6167357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
13, 33
               

               
Conread position:
               
36-301
               

               
Cow position:
               
chr6:19115280-19115543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
233, 37
               

               
Conread position:
               
36-303
               

               
Cow position:
               
chr6:35743622-35743885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
36-592
               

               
Cow position:
               
chr6:51970512-51969953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 37
               

               
Conread position:
               
37-283
               

               
Cow position:
               
chr6:52401145-52401389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
133, 36
               

               
Conread position:
               
37-301
               

               
Cow position:
               
chr6:6721474-6721739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
133, 36
               

               
Conread position:
               
37-301
               

               
Cow position:
               
chr6:13405838-13406100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
195, 36
               

               
Conread position:
               
37-301
               

               
Cow position:
               
chr6:31689033-31688769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
195, 36
               

               
Conread position:
               
37-303
               

               
Cow position:
               
chr6:18874677-18874943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
135, 36
               

               
Conread position:
               
37-303
               

               
Cow position:
               
chr6:19684464-19684198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
135, 36
               

               
Conread position:
               
37-303
               

               
Cow position:
               
chr6:32664933-32665199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
135, 36
               

               
Conread position:
               
37-304
               

               
Cow position:
               
chr6:12678575-12678838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
65, 36
               

               
Conread position:
               
37-441
               

               
Cow position:
               
chr6:55141331-55140918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
195, 36
               

               
Conread position:
               
37-448
               

               
Cow position:
               
chr6:53380625-53381040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
195, 36
               

               
Conread position:
               
37-492
               

               
Cow position:
               
chr6:8284271-8283812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
133, 36
               

               
Conread position:
               
37-516
               

               
Cow position:
               
chr6:50801064-50800566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
195, 36
               

               
Conread position:
               
37-646
               

               
Cow position:
               
chr6:15154595-15155198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
97, 36
               

               
Conread position:
               
38-301
               

               
Cow position:
               
chr6:12518584-12518845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
151, 21
               

               
Conread position:
               
42-516
               

               
Cow position:
               
chr6:21312398-21311919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
108, 31
               

               
Conread position:
               
42-563
               

               
Cow position:
               
chr6:41876692-41876173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
131, 31
               

               
Conread position:
               
44-516
               

               
Cow position:
               
chr6:35181884-35181414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
129, 31
               

               
Conread position:
               
45-286
               

               
Cow position:
               
chr6:18571056-18570821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
136, 14
               

               
Conread position:
               
45-515
               

               
Cow position:
               
chr6:65862048-65862524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
125, 28
               

               
Conread position:
               
46-303
               

               
Cow position:
               
chr6:41051962-41052217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
190, 27
               

               
Conread position:
               
46-514
               

               
Cow position:
               
chr6:64815659-64815175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
22, 80
               

               
Conread position:
               
47-277
               

               
Cow position:
               
chr6:7995534-7995305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
122, 26
               

               
Conread position:
               
47-298
               

               
Cow position:
               
chr6:24361271-24361517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
185, 26
               

               
Conread position:
               
47-564
               

               
Cow position:
               
chr6:5501430-5500913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
190, 26
               

               
Conread position:
               
48-277
               

               
Cow position:
               
chr6:28101171-28100945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
95, 26
               

               
Conread position:
               
48-277
               

               
Cow position:
               
chr6:41437383-41437612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
124, 25
               

               
Conread position:
               
48-291
               

               
Cow position:
               
chr6:4022037-4022286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
61, 25
               

               
Conread position:
               
48-303
               

               
Cow position:
               
chr6:10332745-10332489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
9, 26
               

               
Conread position:
               
48-563
               

               
Cow position:
               
chr6:54887101-54886585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
122, 25
               

               
Conread position:
               
49-303
               

               
Cow position:
               
chr6:44131338-44131084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
123, 24
               

               
Conread position:
               
50-390
               

               
Cow position:
               
chr6:31979222-31978873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
77, 23
               

               
Conread position:
               
52-298
               

               
Cow position:
               
chr6:38595130-38594887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
52-688
               

               
Cow position:
               
chr6:4698819-4698187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
665
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
98, 20
               

               
Conread position:
               
53-460
               

               
Cow position:
               
chr6:42617001-42617407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
161, 20
               

               
Conread position:
               
53-516
               

               
Cow position:
               
chr6:32121266-32121750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
28, 20
               

               
Conread position:
               
54-685
               

               
Cow position:
               
chr6:34617372-34616751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 19
               

               
Conread position:
               
55-277
               

               
Cow position:
               
chr6:3725110-3725326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
181, 18
               

               
Conread position:
               
55-303
               

               
Cow position:
               
chr6:31519958-31520207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
56-303
               

               
Cow position:
               
chr6:24631733-24631484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
69, 17
               

               
Conread position:
               
57-282
               

               
Cow position:
               
chr6:16220657-16220438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
175, 16
               

               
Conread position:
               
57-334
               

               
Cow position:
               
chr6:16690376-16690109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
166, 39
               

               
Conread position:
               
60-489
               

               
Cow position:
               
chr6:31549052-31548617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
110, 13
               

               
Conread position:
               
60-563
               

               
Cow position:
               
chr6:25375784-25376289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
112, 13
               

               
Conread position:
               
61-280
               

               
Cow position:
               
chr6:39978766-39978985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
98, 14
               

               
Conread position:
               
61-286
               

               
Cow position:
               
chr6:43585634-43585850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
171, 12
               

               
Conread position:
               
61-294
               

               
Cow position:
               
chr6:24545132-24545372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
78, 12
               

               
Conread position:
               
61-563
               

               
Cow position:
               
chr6:52481872-52482375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
82, 12
               

               
Conread position:
               
61-637
               

               
Cow position:
               
chr6:17489997-17489424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
171, 16
               

               
Conread position:
               
62-303
               

               
Cow position:
               
chr6:10176974-10176734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
114, 11
               

               
Conread position:
               
62-303
               

               
Cow position:
               
chr6:54218049-54218287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
170, 11
               

               
Conread position:
               
63-499
               

               
Cow position:
               
chr6:30893139-30892699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
169, 15
               

               
Conread position:
               
66-299
               

               
Cow position:
               
chr6:17608479-17608246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
13, 56
               

               
Conread position:
               
66-393
               

               
Cow position:
               
chr6:29503417-29503760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
91, 103
               

               
Conread position:
               
66-408
               

               
Cow position:
               
chr6:64571656-64571999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
238, 109
               

               
Conread position:
               
66-563
               

               
Cow position:
               
chr6:6557407-6557901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
104, 16
               

               
Conread position:
               
67-301
               

               
Cow position:
               
chr6:6160114-6160341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
157, 85
               

               
Conread position:
               
67-301
               

               
Cow position:
               
chr6:30470832-30470611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
165, 13
               

               
Conread position:
               
67-477
               

               
Cow position:
               
chr6:16766009-16765592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
103, 95
               

               
Conread position:
               
68-563
               

               
Cow position:
               
chr6:2390144-2389647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
104, 96
               

               
Conread position:
               
69-563
               

               
Cow position:
               
chr6:10013331-10013827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
103, 95
               

               
Conread position:
               
70-696
               

               
Cow position:
               
chr6:12977214-12977828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
647
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 57
               

               
Conread position:
               
71-655
               

               
Cow position:
               
chr6:36467536-36468118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
98, 68
               

               
Conread position:
               
72-563
               

               
Cow position:
               
chr6:25363088-25363581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
98, 92
               

               
Conread position:
               
73-302
               

               
Cow position:
               
chr6:6569222-6569452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
80, 99
               

               
Conread position:
               
74-301
               

               
Cow position:
               
chr6:67950320-67950547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
158, 221
               

               
Conread position:
               
76-303
               

               
Cow position:
               
chr6:36852022-36852251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
94, 193
               

               
Conread position:
               
80-563
               

               
Cow position:
               
chr6:28294276-28293795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
92, 9
               

               
Conread position:
               
80-563
               

               
Cow position:
               
chr6:53271203-53271684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
92, 9
               

               
Conread position:
               
81-351
               

               
Cow position:
               
chr6:19496975-19497239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
78, 95
               

               
Conread position:
               
82-586
               

               
Cow position:
               
chr6:19842238-19841721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
81, 205
               

               
Conread position:
               
83-653
               

               
Cow position:
               
chr6:26726713-26727265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 68
               

               
Conread position:
               
85-470
               

               
Cow position:
               
chr6:16276278-16276680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 177
               

               
Conread position:
               
86-636
               

               
Cow position:
               
chr6:25783707-25784261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
146, 121
               

               
Conread position:
               
89-303
               

               
Cow position:
               
chr6:18771869-18771654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
92-675
               

               
Cow position:
               
chr6:6340563-6341151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
71, 10
               

               
Conread position:
               
96-298
               

               
Cow position:
               
chr6:3375185-3374981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
97-302
               

               
Cow position:
               
chr6:10106608-10106402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
73, 67
               

               
Conread position:
               
97-336
               

               
Cow position:
               
chr6:39091963-39092205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
97-486
               

               
Cow position:
               
chr6:65818670-65818272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
75, 67
               

               
Conread position:
               
97-516
               

               
Cow position:
               
chr6:2012441-2012858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
135, 64
               

               
Conread position:
               
97-516
               

               
Cow position:
               
chr6:6342846-6343265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
127, 187
               

               
Conread position:
               
97-563
               

               
Cow position:
               
chr6:38061174-38061641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
75, 67
               

               
Conread position:
               
97-639
               

               
Cow position:
               
chr6:29077142-29077684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
135, 67
               

               
Conread position:
               
98-301
               

               
Cow position:
               
chr6:14397178-14397378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
120, 15
               

               
Conread position:
               
99-302
               

               
Cow position:
               
chr6:43664579-43664389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
100-301
               

               
Cow position:
               
chr6:4458254-4458453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
131, 103
               

               
Conread position:
               
100-496
               

               
Cow position:
               
chr6:12274504-12274108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
131, 15
               

               
Conread position:
               
106-339
               

               
Cow position:
               
chr6:21985878-21986102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
126, 10
               

               
Conread position:
               
107-300
               

               
Cow position:
               
chr6:6190842-6191043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
108-694
               

               
Cow position:
               
chr6:22746079-22746658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 188
               

               
Conread position:
               
124-666
               

               
Cow position:
               
chr6:16430976-16430439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 71
               

               
Conread position:
               
126-678
               

               
Cow position:
               
chr6:54377264-54377812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
106, 122
               

               
Conread position:
               
128-516
               

               
Cow position:
               
chr6:60851554-60851161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
177, 146
               

               
Conread position:
               
134-301
               

               
Cow position:
               
chr6:9207882-9207712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
16, 37
               

               
Conread position:
               
141-696
               

               
Cow position:
               
chr6:17693203-17692649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 77
               

               
Conread position:
               
154-460
               

               
Cow position:
               
chr6:41707084-41707398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
78, 20
               

               
Conread position:
               
155-692
               

               
Cow position:
               
chr6:32497438-32497949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
78, 43
               

               
Conread position:
               
157-642
               

               
Cow position:
               
chr6:31256558-31257043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
75, 126
               

               
Conread position:
               
159-655
               

               
Cow position:
               
chr6:37735251-37735756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
42, 23
               

               
Conread position:
               
170-293
               

               
Cow position:
               
chr6:30929069-30928945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
170-516
               

               
Cow position:
               
chr6:32287105-32287458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
69, 142
               

               
Conread position:
               
172-667
               

               
Cow position:
               
chr6:57397227-57397729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
132, 37
               

               
Conread position:
               
174-679
               

               
Cow position:
               
chr6:41215879-41216392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
58, 45
               

               
Conread position:
               
175-336
               

               
Cow position:
               
chr6:29833600-29833428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
175-498
               

               
Cow position:
               
chr6:41357291-41357619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
57, 225
               

               
Conread position:
               
175-652
               

               
Cow position:
               
chr6:65829548-65829063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
129, 276
               

               
Conread position:
               
175-696
               

               
Cow position:
               
chr6:54872552-54872030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
11, 44
               

               
Conread position:
               
185-683
               

               
Cow position:
               
chr6:7163159-7163655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
24, 75
               

               
Conread position:
               
186-599
               

               
Cow position:
               
chr6:67243116-67242701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
46, 218
               

               
Conread position:
               
191-646
               

               
Cow position:
               
chr6:35590609-35591058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
41, 156
               

               
Conread position:
               
193-652
               

               
Cow position:
               
chr6:20029569-20029103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
39, 202
               

               
Conread position:
               
194-387
               

               
Cow position:
               
chr6:32053756-32053551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
111, 15
               

               
Conread position:
               
198-589
               

               
Cow position:
               
chr6:35274960-35274561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
35, 210
               

               
Conread position:
               
200-621
               

               
Cow position:
               
chr6:38454954-38454524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
32, 208
               

               
Conread position:
               
215-653
               

               
Cow position:
               
chr6:53100566-53101005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
17, 153
               

               
Conread position:
               
217-494
               

               
Cow position:
               
chr6:32166106-32165826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
30, 179
               

               
Conread position:
               
217-690
               

               
Cow position:
               
chr6:21694243-21694704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
15, 71
               

               
Conread position:
               
224-683
               

               
Cow position:
               
chr6:55573573-55573103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
8, 34
               

               
Conread position:
               
228-647
               

               
Cow position:
               
chr6:6744329-6744750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
75, 10
               

               
Conread position:
               
232-671
               

               
Cow position:
               
chr6:16257421-16257850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
71, 129
               

               
Conread position:
               
238-655
               

               
Cow position:
               
chr6:47661261-47661684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
59, 46
               

               
Conread position:
               
250-638
               

               
Cow position:
               
chr6:1908784-1908388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
54, 157
               

               
Conread position:
               
250-664
               

               
Cow position:
               
chr6:19429027-19429445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
55, 156
               

               
Conread position:
               
250-690
               

               
Cow position:
               
chr6:20269639-20269191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
55, 157
               

               
Conread position:
               
251-673
               

               
Cow position:
               
chr6:33177026-33176616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
75, 54
               

               
Conread position:
               
302-637
               

               
Cow position:
               
chr6:38778351-38778019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
42, 118
               

               
Conread position:
               
302-695
               

               
Cow position:
               
chr6:67552310-67551930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
41, 91
               

               
Conread position:
               
308-655
               

               
Cow position:
               
chr6:47377939-47378280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
36, 108
               

               
Conread position:
               
313-615
               

               
Cow position:
               
chr6:47631641-47631939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
29, 88
               

               
Conread position:
               
313-649
               

               
Cow position:
               
chr6:48107665-48107992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
30, 116
               

               
Conread position:
               
313-672
               

               
Cow position:
               
chr6:43587055-43587403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
63, 40
               

               
Conread position:
               
325-621
               

               
Cow position:
               
chr6:15933207-15932920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
15, 117
               

               
Conread position:
               
328-636
               

               
Cow position:
               
chr6:51049578-51049883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
12, 92
               

               
Conread position:
               
330-654
               

               
Cow position:
               
chr6:66975002-66975320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
9, 107
               

               
Conread position:
               
343-695
               

               
Cow position:
               
chr6:47457492-47457841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
29, 93
               

               
Conread position:
               
348-696
               

               
Cow position:
               
chr6:32461896-32461553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
28, 71
               

               
Conread position:
               
351-695
               

               
Cow position:
               
chr6:60936049-60936381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
21, 68
               

               
Conread position:
               
357-610
               

               
Cow position:
               
chr6:7008801-7008554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
39, 59
               

               
Conread position:
               
363-696
               

               
Cow position:
               
chr6:10502597-10502274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
187, 29
               

               
Conread position:
               
365-694
               

               
Cow position:
               
chr6:33469679-33469991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
35, 48
               

               
Conread position:
               
424-675
               

               
Cow position:
               
chr6:15386380-15386134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
19, 95
               

               
Conread position:
               
428-637
               

               
Cow position:
               
chr6:30928838-30928636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
118, 5
               

               
Conread position:
               
428-653
               

               
Cow position:
               
chr6:7128116-7127901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
428-690
               

               
Cow position:
               
chr6:31437017-31437266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
107, 5
               

               
Conread position:
               
428-690
               

               
Cow position:
               
chr6:36466988-36466730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
60, 7
               

               
Conread position:
               
432-696
               

               
Cow position:
               
chr6:13583978-13584236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
64, 15
               

               
Conread position:
               
433-653
               

               
Cow position:
               
chr6:47610448-47610662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
55, 76
               

               
Conread position:
               
433-664
               

               
Cow position:
               
chr6:61547732-61547511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
433-696
               

               
Cow position:
               
chr6:49168210-49167963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
258, 77
               

               
Conread position:
               
434-653
               

               
Cow position:
               
chr6:7075168-7074949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
105, 88
               

               
Conread position:
               
434-682
               

               
Cow position:
               
chr6:49968495-49968739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
436-696
               

               
Cow position:
               
chr6:53211226-53210966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
110, 98
               

               
Conread position:
               
448-696
               

               
Cow position:
               
chr6:62982696-62982942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
98, 59
               

               
Conread position:
               
463-693
               

               
Cow position:
               
chr6:35205819-35205597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
83, 46
               

               
Conread position:
               
477-694
               

               
Cow position:
               
chr6:20837922-20838130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
58, 39
               

               
Conread position:
               
487-696
               

               
Cow position:
               
chr6:16278113-16278317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
63, 25
               

               
Conread position:
               
518-649
               

               
Cow position:
               
chr6:31427745-31427877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
520-692
               

               
Cow position:
               
chr6:31530857-31531032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
524-645
               

               
Cow position:
               
chr6:19575212-19575090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
528-694
               

               
Cow position:
               
chr6:35837439-35837605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
10, 18
               
Show alignments to all cow chromosomes.