Cow genome map
| Conread name: | Ss1.1-ruio05_f13.5.5 |
| Conread position: | 2-493 |
| Cow position: | chr10:21939121-21938633 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 303 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 101, 94 |
| Conread position: | 3-642 |
| Cow position: | chr10:8996552-8995924 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 553, 0 |
| Conread position: | 3-644 |
| Cow position: | chr10:8996888-8996248 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 624, 0 |
| Conread position: | 11-709 |
| Cow position: | chr10:8996712-8996012 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 424, 409 |
| Conread position: | 15-294 |
| Cow position: | chr10:9031385-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 15-502 |
| Cow position: | chr10:9010352-9009865 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 15-642 |
| Cow position: | chr10:8996624-8995997 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 24-378 |
| Cow position: | chr10:9031310-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 132 |
| Conread position: | 24-625 |
| Cow position: | chr10:9010511-9009910 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 408, 421 |
| Conread position: | 24-705 |
| Cow position: | chr10:8996783-8996100 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 584, 589 |
| Conread position: | 30-462 |
| Cow position: | chr10:9031232-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 36-616 |
| Cow position: | chr10:9010415-9009835 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 69-502 |
| Cow position: | chr10:9031672-9032107 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 273 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 145, 320 |
| Conread position: | 69-625 |
| Cow position: | chr10:9010550-9009994 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 115 |
| Conread position: | 69-637 |
| Cow position: | chr10:21939222-21938656 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 79 |
| Conread position: | 114-546 |
| Cow position: | chr10:9031232-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 44 |
| Conread position: | 210-577 |
| Cow position: | chr10:9031244-9031611 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 213-702 |
| Cow position: | chr10:9010572-9010083 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 309 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 132, 9 |
| Conread position: | 237-534 |
| Cow position: | chr10:9031672-9031980 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 278-625 |
| Cow position: | chr10:9031228-9031575 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 232 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 291-649 |
| Cow position: | chr10:9010580-9010224 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 226 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 337, 0 |
| Conread position: | 294-670 |
| Cow position: | chr10:8996933-8996555 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 341, 0 |
| Conread position: | 311-705 |
| Cow position: | chr10:9031177-9031573 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 334, 317 |
Show alignments to all cow chromosomes.