Cow genome map

Conread name: Ss1.1-ruio05_f13.5.5

Conread position: 1-491
Cow position:
Alignm length: 491
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-627
Cow position:
Alignm length: 628
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 18

Conread position: 1-644
Cow position:
Alignm length: 644
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 627, 0

Conread position: 1-700
Cow position:
Alignm length: 703
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 645, 627

Conread position: 1-708
Cow position:
Alignm length: 711
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 644, 626

Conread position: 2-415
Cow position:
Alignm length: 416
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 87

Conread position: 2-627
Cow position:
Alignm length: 628
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 508, 498

Conread position: 3-158
Cow position:
Alignm length: 156
Alignm identity: 114
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-418
Cow position:
Alignm length: 419
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 83

Conread position: 3-552
Cow position:
Alignm length: 553
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 75

Conread position: 3-645
Cow position:
Alignm length: 643
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 625, 0

Conread position: 4-627
Cow position:
Alignm length: 625
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 52

Conread position: 4-644
Cow position:
Alignm length: 641
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 624, 0

Conread position: 4-649
Cow position:
Alignm length: 646
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 4-671
Cow position:
Alignm length: 672
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 99

Conread position: 4-704
Cow position:
Alignm length: 705
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 154

Conread position: 5-619
Cow position:
Alignm length: 615
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-639
Cow position:
Alignm length: 636
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 582, 590

Conread position: 5-644
Cow position:
Alignm length: 641
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 266

Conread position: 5-734
Cow position:
Alignm length: 736
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 82

Conread position: 6-613
Cow position:
Alignm length: 609
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 589, 584

Conread position: 6-626
Cow position:
Alignm length: 621
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-704
Cow position:
Alignm length: 704
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 434, 439

Conread position: 8-625
Cow position:
Alignm length: 620
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 419, 412

Conread position: 9-419
Cow position:
Alignm length: 413
Alignm identity: 244
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 152, 139

Conread position: 9-627
Cow position:
Alignm length: 622
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 66

Conread position: 9-645
Cow position:
Alignm length: 641
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 79

Conread position: 12-626
Cow position:
Alignm length: 616
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 146

Conread position: 14-644
Cow position:
Alignm length: 634
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 144

Conread position: 15-399
Cow position:
Alignm length: 386
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 93

Conread position: 15-621
Cow position:
Alignm length: 608
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 408, 420

Conread position: 15-625
Cow position:
Alignm length: 613
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 237

Conread position: 15-669
Cow position:
Alignm length: 658
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 630, 613

Conread position: 22-708
Cow position:
Alignm length: 692
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 324, 317

Conread position: 23-558
Cow position:
Alignm length: 537
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 526, 0

Conread position: 34-701
Cow position:
Alignm length: 674
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 19

Conread position: 41-626
Cow position:
Alignm length: 587
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 389, 9

Conread position: 65-644
Cow position:
Alignm length: 581
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 92

Conread position: 69-419
Cow position:
Alignm length: 351
Alignm identity: 209
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 95-644
Cow position:
Alignm length: 551
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 335, 319

Conread position: 129-700
Cow position:
Alignm length: 574
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 514, 0

Conread position: 208-618
Cow position:
Alignm length: 412
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 390, 382

Conread position: 292-625
Cow position:
Alignm length: 334
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 309-649
Cow position:
Alignm length: 341
Alignm identity: 222
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 319, 0

Show alignments to all cow chromosomes.