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Cow genome map

           
Conread name:
           
Ss1.1-ruio05_f13.5.5
        

               
Conread position:
               
1-221
               

               
Cow position:
               
chr18:50271924-50272144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-303
               

               
Cow position:
               
chr18:50282053-50282355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-396
               

               
Cow position:
               
chr18:42827615-42828015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
310, 0
               

               
Conread position:
               
1-467
               

               
Cow position:
               
chr18:50058824-50058360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 264
               

               
Conread position:
               
1-558
               

               
Cow position:
               
chr18:1418045-1418602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 157
               

               
Conread position:
               
1-558
               

               
Cow position:
               
chr18:49032499-49031945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
420, 429
               

               
Conread position:
               
1-581
               

               
Cow position:
               
chr18:55018091-55018671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 11
               

               
Conread position:
               
1-599
               

               
Cow position:
               
chr18:50848882-50849480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-625
               

               
Cow position:
               
chr18:49033003-49032379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-625
               

               
Cow position:
               
chr18:49033087-49032463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 157
               

               
Conread position:
               
1-625
               

               
Cow position:
               
chr18:49033171-49032547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 157
               

               
Conread position:
               
1-625
               

               
Cow position:
               
chr18:50099102-50099726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
349, 333
               

               
Conread position:
               
1-625
               

               
Cow position:
               
chr18:55018007-55018631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 95
               

               
Conread position:
               
1-625
               

               
Cow position:
               
chr18:56433346-56433966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
271, 5
               

               
Conread position:
               
1-631
               

               
Cow position:
               
chr18:50848546-50849176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
437, 444
               

               
Conread position:
               
1-637
               

               
Cow position:
               
chr18:49032751-49032115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 188
               

               
Conread position:
               
1-638
               

               
Cow position:
               
chr18:42792183-42792820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-638
               

               
Cow position:
               
chr18:56329640-56329004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
626, 0
               

               
Conread position:
               
1-644
               

               
Cow position:
               
chr18:42791679-42792321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
627, 0
               

               
Conread position:
               
1-648
               

               
Cow position:
               
chr18:54992779-54993424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
651
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 11
               

               
Conread position:
               
1-649
               

               
Cow position:
               
chr18:50848210-50848856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
651
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 94
               

               
Conread position:
               
1-669
               

               
Cow position:
               
chr18:50022532-50021855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
683
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 109
               

               
Conread position:
               
1-673
               

               
Cow position:
               
chr18:50848630-50849304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
676
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 147
               

               
Conread position:
               
1-691
               

               
Cow position:
               
chr18:53498012-53498707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
703
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 170
               

               
Conread position:
               
2-374
               

               
Cow position:
               
chr18:44397891-44397519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 247
               

               
Conread position:
               
2-384
               

               
Cow position:
               
chr18:43168172-43168554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 156
               

               
Conread position:
               
2-387
               

               
Cow position:
               
chr18:50281970-50282355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
28, 35
               

               
Conread position:
               
2-389
               

               
Cow position:
               
chr18:53586367-53585980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
343, 337
               

               
Conread position:
               
2-406
               

               
Cow position:
               
chr18:53586283-53585879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
92, 86
               

               
Conread position:
               
2-412
               

               
Cow position:
               
chr18:50021768-50021357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
27, 81
               

               
Conread position:
               
2-424
               

               
Cow position:
               
chr18:50271757-50272177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
339, 330
               

               
Conread position:
               
2-463
               

               
Cow position:
               
chr18:56329303-56328842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 35
               

               
Conread position:
               
2-473
               

               
Cow position:
               
chr18:50295484-50295950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 172
               

               
Conread position:
               
2-474
               

               
Cow position:
               
chr18:55066814-55066343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
98, 94
               

               
Conread position:
               
2-491
               

               
Cow position:
               
chr18:51751955-51751470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
380, 419
               

               
Conread position:
               
2-502
               

               
Cow position:
               
chr18:50083914-50084416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 12
               

               
Conread position:
               
2-530
               

               
Cow position:
               
chr18:50848967-50849495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 156
               

               
Conread position:
               
2-541
               

               
Cow position:
               
chr18:43168004-43168543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-545
               

               
Cow position:
               
chr18:42792352-42792895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-545
               

               
Cow position:
               
chr18:51400660-51401203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
491, 509
               

               
Conread position:
               
2-555
               

               
Cow position:
               
chr18:56128669-56129221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 35
               

               
Conread position:
               
2-580
               

               
Cow position:
               
chr18:54966995-54967573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 178
               

               
Conread position:
               
2-581
               

               
Cow position:
               
chr18:54993368-54993945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 82
               

               
Conread position:
               
2-604
               

               
Cow position:
               
chr18:42693836-42693234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
563, 552
               

               
Conread position:
               
2-625
               

               
Cow position:
               
chr18:40075067-40075690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 10
               

               
Conread position:
               
2-625
               

               
Cow position:
               
chr18:42792268-42792891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 156
               

               
Conread position:
               
2-625
               

               
Cow position:
               
chr18:49032834-49032211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
624
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-625
               

               
Cow position:
               
chr18:53509282-53509905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 274
               

               
Conread position:
               
2-625
               

               
Cow position:
               
chr18:53525736-53526359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 274
               

               
Conread position:
               
2-625
               

               
Cow position:
               
chr18:53586619-53585996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 10
               

               
Conread position:
               
2-625
               

               
Cow position:
               
chr18:53586703-53586080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 182
               

               
Conread position:
               
2-625
               

               
Cow position:
               
chr18:54967499-54968117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 76
               

               
Conread position:
               
2-625
               

               
Cow position:
               
chr18:54979520-54980143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 169
               

               
Conread position:
               
2-626
               

               
Cow position:
               
chr18:49032582-49031961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
343, 347
               

               
Conread position:
               
2-626
               

               
Cow position:
               
chr18:51367970-51367347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
262, 156
               

               
Conread position:
               
2-627
               

               
Cow position:
               
chr18:41197871-41198496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 167
               

               
Conread position:
               
2-627
               

               
Cow position:
               
chr18:42675529-42674904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 37
               

               
Conread position:
               
2-627
               

               
Cow position:
               
chr18:44398311-44397686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-627
               

               
Cow position:
               
chr18:50099438-50100064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 432
               

               
Conread position:
               
2-627
               

               
Cow position:
               
chr18:50848463-50849088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
443, 435
               

               
Conread position:
               
2-627
               

               
Cow position:
               
chr18:52427593-52428218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
517, 500
               

               
Conread position:
               
2-630
               

               
Cow position:
               
chr18:53635496-53634870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 35
               

               
Conread position:
               
2-638
               

               
Cow position:
               
chr18:50059495-50058859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 146
               

               
Conread position:
               
2-644
               

               
Cow position:
               
chr18:50245868-50246510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 16
               

               
Conread position:
               
2-644
               

               
Cow position:
               
chr18:52432942-52433583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
645
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
416, 424
               

               
Conread position:
               
2-644
               

               
Cow position:
               
chr18:56329555-56328914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
643
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
625, 0
               

               
Conread position:
               
2-644
               

               
Cow position:
               
chr18:56329723-56329082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 35
               

               
Conread position:
               
2-669
               

               
Cow position:
               
chr18:43093782-43093125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
673
               

               
Alignm identity:
               
467
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 58
               

               
Conread position:
               
2-670
               

               
Cow position:
               
chr18:42791428-42792098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
672
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
641, 626
               

               
Conread position:
               
2-670
               

               
Cow position:
               
chr18:49032918-49032248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
672
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 146
               

               
Conread position:
               
2-672
               

               
Cow position:
               
chr18:41197787-41198459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
676
               

               
Alignm identity:
               
472
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
419, 443
               

               
Conread position:
               
2-689
               

               
Cow position:
               
chr18:50059663-50058974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
690
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
633, 0
               

               
Conread position:
               
2-700
               

               
Cow position:
               
chr18:44398395-44397695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
702
               

               
Alignm identity:
               
475
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
429, 418
               

               
Conread position:
               
2-701
               

               
Cow position:
               
chr18:44254095-44253398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
705
               

               
Alignm identity:
               
460
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 177
               

               
Conread position:
               
2-708
               

               
Cow position:
               
chr18:42791848-42792556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
710
               

               
Alignm identity:
               
485
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
644, 625
               

               
Conread position:
               
2-709
               

               
Cow position:
               
chr18:43093458-43092751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
713
               

               
Alignm identity:
               
505
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
351, 339
               

               
Conread position:
               
2-711
               

               
Cow position:
               
chr18:50059075-50058366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
713
               

               
Alignm identity:
               
473
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
519, 499
               

               
Conread position:
               
2-777
               

               
Cow position:
               
chr18:50848715-50849492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
785
               

               
Alignm identity:
               
527
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 67
               

               
Conread position:
               
3-211
               

               
Cow position:
               
chr18:42837303-42837095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
91, 72
               

               
Conread position:
               
3-226
               

               
Cow position:
               
chr18:14453075-14452852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
99, 106
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr18:42744084-42743793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-303
               

               
Cow position:
               
chr18:42792605-42792905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-312
               

               
Cow position:
               
chr18:56247356-56247051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
279, 208
               

               
Conread position:
               
3-320
               

               
Cow position:
               
chr18:51839096-51838779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-335
               

               
Cow position:
               
chr18:50246542-50246871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
290, 0
               

               
Conread position:
               
3-373
               

               
Cow position:
               
chr18:51765281-51764911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-391
               

               
Cow position:
               
chr18:52447993-52448382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
295, 0
               

               
Conread position:
               
3-436
               

               
Cow position:
               
chr18:51812335-51811904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
425, 0
               

               
Conread position:
               
3-455
               

               
Cow position:
               
chr18:51765365-51764914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 155
               

               
Conread position:
               
3-460
               

               
Cow position:
               
chr18:42744252-42743795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 85
               

               
Conread position:
               
3-470
               

               
Cow position:
               
chr18:51400745-51401212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 9
               

               
Conread position:
               
3-471
               

               
Cow position:
               
chr18:41198292-41198760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 172
               

               
Conread position:
               
3-502
               

               
Cow position:
               
chr18:51789092-51788595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
435, 406
               

               
Conread position:
               
3-524
               

               
Cow position:
               
chr18:42827533-42828058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 155
               

               
Conread position:
               
3-543
               

               
Cow position:
               
chr18:50048674-50048140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 176
               

               
Conread position:
               
3-548
               

               
Cow position:
               
chr18:56329386-56328841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-559
               

               
Cow position:
               
chr18:51752038-51751486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
345, 323
               

               
Conread position:
               
3-586
               

               
Cow position:
               
chr18:40324503-40323921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
561, 0
               

               
Conread position:
               
3-587
               

               
Cow position:
               
chr18:50083831-50084417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
453, 478
               

               
Conread position:
               
3-625
               

               
Cow position:
               
chr18:50848380-50849002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
397, 402
               

               
Conread position:
               
3-626
               

               
Cow position:
               
chr18:41949051-41948428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 81
               

               
Conread position:
               
3-626
               

               
Cow position:
               
chr18:42744672-42744049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 91
               

               
Conread position:
               
3-626
               

               
Cow position:
               
chr18:43022690-43022067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 29
               

               
Conread position:
               
3-627
               

               
Cow position:
               
chr18:42675192-42674568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 96
               

               
Conread position:
               
3-627
               

               
Cow position:
               
chr18:44398226-44397602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-627
               

               
Cow position:
               
chr18:50059578-50058954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 228
               

               
Conread position:
               
3-627
               

               
Cow position:
               
chr18:51400577-51401201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 180
               

               
Conread position:
               
3-627
               

               
Cow position:
               
chr18:51765617-51764993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 155
               

               
Conread position:
               
3-627
               

               
Cow position:
               
chr18:51789512-51788888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 179
               

               
Conread position:
               
3-627
               

               
Cow position:
               
chr18:51969068-51969672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 106
               

               
Conread position:
               
3-627
               

               
Cow position:
               
chr18:52446985-52447609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 34
               

               
Conread position:
               
3-627
               

               
Cow position:
               
chr18:52447405-52448029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-627
               

               
Cow position:
               
chr18:53635663-53635039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 34
               

               
Conread position:
               
3-627
               

               
Cow position:
               
chr18:56128502-56129126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 34
               

               
Conread position:
               
3-628
               

               
Cow position:
               
chr18:41948883-41948260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 176
               

               
Conread position:
               
3-628
               

               
Cow position:
               
chr18:43167921-43168546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-631
               

               
Cow position:
               
chr18:42675024-42674396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 85
               

               
Conread position:
               
3-633
               

               
Cow position:
               
chr18:51765869-51765239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 260
               

               
Conread position:
               
3-637
               

               
Cow position:
               
chr18:43093706-43093075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
515, 24
               

               
Conread position:
               
3-638
               

               
Cow position:
               
chr18:41197704-41198339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
467
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-638
               

               
Cow position:
               
chr18:43022942-43022307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 92
               

               
Conread position:
               
3-638
               

               
Cow position:
               
chr18:51400325-51400960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-644
               

               
Cow position:
               
chr18:43093541-43092901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
643
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
429, 434
               

               
Conread position:
               
3-644
               

               
Cow position:
               
chr18:51812671-51812031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 155
               

               
Conread position:
               
3-644
               

               
Cow position:
               
chr18:51813007-51812367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
645
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 34
               

               
Conread position:
               
3-649
               

               
Cow position:
               
chr18:42791093-42791737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
650
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 81
               

               
Conread position:
               
3-649
               

               
Cow position:
               
chr18:42791765-42792409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
649
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
442, 434
               

               
Conread position:
               
3-649
               

               
Cow position:
               
chr18:42837891-42837247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 155
               

               
Conread position:
               
3-649
               

               
Cow position:
               
chr18:43175479-43174835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
651
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 89
               

               
Conread position:
               
3-687
               

               
Cow position:
               
chr18:53586871-53586184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
693
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 107
               

               
Conread position:
               
3-698
               

               
Cow position:
               
chr18:52447153-52447850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
700
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 155
               

               
Conread position:
               
3-708
               

               
Cow position:
               
chr18:42791345-42792052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
711
               

               
Alignm identity:
               
474
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 155
               

               
Conread position:
               
4-227
               

               
Cow position:
               
chr18:42792690-42792913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-315
               

               
Cow position:
               
chr18:1418300-1418611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-418
               

               
Cow position:
               
chr18:42837554-42837140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-501
               

               
Cow position:
               
chr18:50271675-50272171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
344, 336
               

               
Conread position:
               
4-551
               

               
Cow position:
               
chr18:42744335-42743788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-559
               

               
Cow position:
               
chr18:56316179-56316734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-625
               

               
Cow position:
               
chr18:50083580-50084201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-625
               

               
Cow position:
               
chr18:50281720-50282341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 21
               

               
Conread position:
               
4-625
               

               
Cow position:
               
chr18:54992700-54993319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 10
               

               
Conread position:
               
4-638
               

               
Cow position:
               
chr18:50049093-50048459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 94
               

               
Conread position:
               
4-648
               

               
Cow position:
               
chr18:54979440-54980080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
339, 10
               

               
Conread position:
               
4-670
               

               
Cow position:
               
chr18:50099021-50099689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
674
               

               
Alignm identity:
               
459
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
336, 346
               

               
Conread position:
               
4-671
               

               
Cow position:
               
chr18:50083328-50083997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
674
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 251
               

               
Conread position:
               
4-700
               

               
Cow position:
               
chr18:42694170-42693472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
702
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 239
               

               
Conread position:
               
4-700
               

               
Cow position:
               
chr18:50083496-50084194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
703
               

               
Alignm identity:
               
484
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 80
               

               
Conread position:
               
5-502
               

               
Cow position:
               
chr18:50251049-50251543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 5
               

               
Conread position:
               
5-538
               

               
Cow position:
               
chr18:50083749-50084282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 177
               

               
Conread position:
               
5-552
               

               
Cow position:
               
chr18:40075153-40075701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 242
               

               
Conread position:
               
5-586
               

               
Cow position:
               
chr18:50031019-50030436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 80
               

               
Conread position:
               
5-587
               

               
Cow position:
               
chr18:50083665-50084247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 177
               

               
Conread position:
               
5-599
               

               
Cow position:
               
chr18:42693497-42692908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
471, 266
               

               
Conread position:
               
5-618
               

               
Cow position:
               
chr18:50295319-50295930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
591, 549
               

               
Conread position:
               
5-623
               

               
Cow position:
               
chr18:50022356-50021734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 56
               

               
Conread position:
               
5-625
               

               
Cow position:
               
chr18:14453973-14453353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 168
               

               
Conread position:
               
5-638
               

               
Cow position:
               
chr18:42693917-42693285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
637
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 174
               

               
Conread position:
               
5-638
               

               
Cow position:
               
chr18:50030938-50030306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 83
               

               
Conread position:
               
5-639
               

               
Cow position:
               
chr18:50048840-50048213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 35
               

               
Conread position:
               
5-643
               

               
Cow position:
               
chr18:50022272-50021629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
649
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 341
               

               
Conread position:
               
5-644
               

               
Cow position:
               
chr18:50245788-50246426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 81
               

               
Conread position:
               
5-669
               

               
Cow position:
               
chr18:41197958-41198624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
670
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 164
               

               
Conread position:
               
5-700
               

               
Cow position:
               
chr18:41197622-41198319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
698
               

               
Alignm identity:
               
484
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
635, 0
               

               
Conread position:
               
5-700
               

               
Cow position:
               
chr18:42675691-42674997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
700
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
646, 158
               

               
Conread position:
               
5-705
               

               
Cow position:
               
chr18:43167755-43168457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
704
               

               
Alignm identity:
               
481
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
638, 623
               

               
Conread position:
               
5-705
               

               
Cow position:
               
chr18:43167839-43168541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
706
               

               
Alignm identity:
               
481
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 153
               

               
Conread position:
               
6-388
               

               
Cow position:
               
chr18:33092722-33092346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
296, 0
               

               
Conread position:
               
6-418
               

               
Cow position:
               
chr18:53560394-53560802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
261, 256
               

               
Conread position:
               
6-471
               

               
Cow position:
               
chr18:42792440-42792905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 152
               

               
Conread position:
               
6-552
               

               
Cow position:
               
chr18:42827452-42828003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
456, 461
               

               
Conread position:
               
6-556
               

               
Cow position:
               
chr18:53586530-53585981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 18
               

               
Conread position:
               
6-586
               

               
Cow position:
               
chr18:54980028-54980607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 73
               

               
Conread position:
               
6-586
               

               
Cow position:
               
chr18:56128253-56128833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
437, 431
               

               
Conread position:
               
6-596
               

               
Cow position:
               
chr18:51765950-51765360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 253
               

               
Conread position:
               
6-598
               

               
Cow position:
               
chr18:50048923-50048331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 50
               

               
Conread position:
               
6-598
               

               
Cow position:
               
chr18:51839429-51838837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
6-606
               

               
Cow position:
               
chr18:53635912-53635312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 90
               

               
Conread position:
               
6-625
               

               
Cow position:
               
chr18:1417966-1418585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
6-625
               

               
Cow position:
               
chr18:42791600-42792219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
6-625
               

               
Cow position:
               
chr18:50083414-50084033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
6-626
               

               
Cow position:
               
chr18:51752203-51751583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
624
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 169
               

               
Conread position:
               
6-627
               

               
Cow position:
               
chr18:42791936-42792557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 164
               

               
Conread position:
               
6-627
               

               
Cow position:
               
chr18:50098939-50099560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 54
               

               
Conread position:
               
6-627
               

               
Cow position:
               
chr18:50295236-50295857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
624
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 117
               

               
Conread position:
               
6-631
               

               
Cow position:
               
chr18:56493891-56494517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 89
               

               
Conread position:
               
6-638
               

               
Cow position:
               
chr18:50271509-50272141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
635
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 82
               

               
Conread position:
               
6-643
               

               
Cow position:
               
chr18:42694000-42693364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 256
               

               
Conread position:
               
6-643
               

               
Cow position:
               
chr18:50022016-50021377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 85
               

               
Conread position:
               
6-644
               

               
Cow position:
               
chr18:42791264-42791901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 90
               

               
Conread position:
               
6-644
               

               
Cow position:
               
chr18:43167672-43168309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 35
               

               
Conread position:
               
6-644
               

               
Cow position:
               
chr18:50281638-50282275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 29
               

               
Conread position:
               
6-670
               

               
Cow position:
               
chr18:50083246-50083912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
670
               

               
Alignm identity:
               
453
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 33
               

               
Conread position:
               
6-671
               

               
Cow position:
               
chr18:50059407-50058740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
669
               

               
Alignm identity:
               
457
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
640, 621
               

               
Conread position:
               
6-702
               

               
Cow position:
               
chr18:42791516-42792214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
700
               

               
Alignm identity:
               
472
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
439, 431
               

               
Conread position:
               
6-702
               

               
Cow position:
               
chr18:50059239-50058541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
701
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
255, 240
               

               
Conread position:
               
7-625
               

               
Cow position:
               
chr18:50059322-50058704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 151
               

               
Conread position:
               
7-625
               

               
Cow position:
               
chr18:54993289-54993907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
621
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
255, 239
               

               
Conread position:
               
8-294
               

               
Cow position:
               
chr18:42984754-42984468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
92, 71
               

               
Conread position:
               
8-476
               

               
Cow position:
               
chr18:56316267-56316735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 150
               

               
Conread position:
               
8-586
               

               
Cow position:
               
chr18:53587033-53586455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 101
               

               
Conread position:
               
8-589
               

               
Cow position:
               
chr18:54980114-54980694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 71
               

               
Conread position:
               
8-619
               

               
Cow position:
               
chr18:42694082-42693471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
561, 553
               

               
Conread position:
               
8-627
               

               
Cow position:
               
chr18:53610333-53609714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 29
               

               
Conread position:
               
9-226
               

               
Cow position:
               
chr18:43053408-43053191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
9-294
               

               
Cow position:
               
chr18:44240564-44240849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
9-340
               

               
Cow position:
               
chr18:51367544-51367213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
29, 24
               

               
Conread position:
               
9-375
               

               
Cow position:
               
chr18:42984837-42984471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 148
               

               
Conread position:
               
9-375
               

               
Cow position:
               
chr18:44240480-44240846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
9-383
               

               
Cow position:
               
chr18:42837465-42837091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 79
               

               
Conread position:
               
9-383
               

               
Cow position:
               
chr18:43048593-43048221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
158, 166
               

               
Conread position:
               
9-384
               

               
Cow position:
               
chr18:42674766-42674391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
9-384
               

               
Cow position:
               
chr18:43022348-43021973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 75
               

               
Conread position:
               
9-474
               

               
Cow position:
               
chr18:44184415-44183950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 167
               

               
Conread position:
               
9-481
               

               
Cow position:
               
chr18:52428524-52428996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
9-481
               

               
Cow position:
               
chr18:52433705-52434177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
9-503
               

               
Cow position:
               
chr18:42837633-42837139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
421, 402
               

               
Conread position:
               
9-503
               

               
Cow position:
               
chr18:42959912-42959427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 83
               

               
Conread position:
               
9-516
               

               
Cow position:
               
chr18:51812413-51811906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 241
               

               
Conread position:
               
9-556
               

               
Cow position:
               
chr18:43174969-43174431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 149
               

               
Conread position:
               
9-559
               

               
Cow position:
               
chr18:52428440-52428990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
486, 509
               

               
Conread position:
               
9-559
               

               
Cow position:
               
chr18:52433621-52434171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
486, 509
               

               
Conread position:
               
9-580
               

               
Cow position:
               
chr18:51766031-51765460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 61
               

               
Conread position:
               
9-581
               

               
Cow position:
               
chr18:53509457-53510027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 155
               

               
Conread position:
               
9-586
               

               
Cow position:
               
chr18:53525911-53526486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 168
               

               
Conread position:
               
9-588
               

               
Cow position:
               
chr18:42960332-42959753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
333, 339
               

               
Conread position:
               
9-592
               

               
Cow position:
               
chr18:51789170-51788589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 171
               

               
Conread position:
               
9-595
               

               
Cow position:
               
chr18:56247678-56247102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 149
               

               
Conread position:
               
9-601
               

               
Cow position:
               
chr18:44253504-44252926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 75
               

               
Conread position:
               
9-618
               

               
Cow position:
               
chr18:52447747-52448357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 184
               

               
Conread position:
               
9-625
               

               
Cow position:
               
chr18:41948961-41948345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
9-627
               

               
Cow position:
               
chr18:33064467-33063849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 168
               

               
Conread position:
               
9-627
               

               
Cow position:
               
chr18:41949213-41948595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 149
               

               
Conread position:
               
9-627
               

               
Cow position:
               
chr18:42744414-42743796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
621
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 180
               

               
Conread position:
               
9-627
               

               
Cow position:
               
chr18:42792023-42792641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
621
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
412, 421
               

               
Conread position:
               
9-627
               

               
Cow position:
               
chr18:42792107-42792725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
9-627
               

               
Cow position:
               
chr18:44253588-44252984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
337, 215
               

               
Conread position:
               
9-627
               

               
Cow position:
               
chr18:50049174-50048554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 439
               

               
Conread position:
               
9-627
               

               
Cow position:
               
chr18:51789590-51788972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 173
               

               
Conread position:
               
9-627
               

               
Cow position:
               
chr18:51812749-51812131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 173
               

               
Conread position:
               
9-627
               

               
Cow position:
               
chr18:52428020-52428638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 84
               

               
Conread position:
               
9-627
               

               
Cow position:
               
chr18:52428188-52428806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 169
               

               
Conread position:
               
9-627
               

               
Cow position:
               
chr18:52447075-52447693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
621
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 243
               

               
Conread position:
               
9-627
               

               
Cow position:
               
chr18:52447243-52447861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
9-644
               

               
Cow position:
               
chr18:51400415-51401049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
618, 0
               

               
Conread position:
               
9-644
               

               
Cow position:
               
chr18:51789758-51789124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 161
               

               
Conread position:
               
9-649
               

               
Cow position:
               
chr18:43175137-43174499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
647
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 75
               

               
Conread position:
               
9-668
               

               
Cow position:
               
chr18:40086295-40085644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
665
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
255, 79
               

               
Conread position:
               
9-671
               

               
Cow position:
               
chr18:40324581-40323918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
669
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
344, 333
               

               
Conread position:
               
9-684
               

               
Cow position:
               
chr18:43175221-43174544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
680
               

               
Alignm identity:
               
467
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
353, 340
               

               
Conread position:
               
9-688
               

               
Cow position:
               
chr18:41949297-41948616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
682
               

               
Alignm identity:
               
471
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
634, 0
               

               
Conread position:
               
9-693
               

               
Cow position:
               
chr18:42744582-42743896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
688
               

               
Alignm identity:
               
471
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
636, 619
               

               
Conread position:
               
9-695
               

               
Cow position:
               
chr18:43120188-43119500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
691
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 149
               

               
Conread position:
               
9-700
               

               
Cow position:
               
chr18:41949129-41948436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
694
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
634, 0
               

               
Conread position:
               
9-700
               

               
Cow position:
               
chr18:51812917-51812224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
697
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 88
               

               
Conread position:
               
9-702
               

               
Cow position:
               
chr18:44154148-44153472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
696
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
631, 169
               

               
Conread position:
               
9-702
               

               
Cow position:
               
chr18:44253756-44253075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
699
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 170
               

               
Conread position:
               
9-704
               

               
Cow position:
               
chr18:51368467-51367769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
701
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 239
               

               
Conread position:
               
9-709
               

               
Cow position:
               
chr18:43175557-43174855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
705
               

               
Alignm identity:
               
457
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 75
               

               
Conread position:
               
9-769
               

               
Cow position:
               
chr18:52447495-52448258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
765
               

               
Alignm identity:
               
505
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 184
               

               
Conread position:
               
10-336
               

               
Cow position:
               
chr18:51969727-51970043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
264, 78
               

               
Conread position:
               
10-385
               

               
Cow position:
               
chr18:33063962-33063587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
219, 214
               

               
Conread position:
               
10-467
               

               
Cow position:
               
chr18:44397967-44397510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
10-557
               

               
Cow position:
               
chr18:33092886-33092345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
85, 78
               

               
Conread position:
               
10-606
               

               
Cow position:
               
chr18:53560231-53560822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 5
               

               
Conread position:
               
10-621
               

               
Cow position:
               
chr18:33064382-33063771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
613
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
421, 410
               

               
Conread position:
               
10-625
               

               
Cow position:
               
chr18:33065054-33064439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 81
               

               
Conread position:
               
10-626
               

               
Cow position:
               
chr18:44240145-44240761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 74
               

               
Conread position:
               
10-627
               

               
Cow position:
               
chr18:42985424-42984807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 161
               

               
Conread position:
               
10-627
               

               
Cow position:
               
chr18:43120271-43119654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 239
               

               
Conread position:
               
10-627
               

               
Cow position:
               
chr18:52433034-52433651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
327, 332
               

               
Conread position:
               
10-628
               

               
Cow position:
               
chr18:42985088-42984470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 65
               

               
Conread position:
               
10-720
               

               
Cow position:
               
chr18:42985172-42984456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
723
               

               
Alignm identity:
               
490
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 75
               

               
Conread position:
               
11-503
               

               
Cow position:
               
chr18:51367710-51367218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
419, 409
               

               
Conread position:
               
11-546
               

               
Cow position:
               
chr18:43022514-43021979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 64
               

               
Conread position:
               
11-546
               

               
Cow position:
               
chr18:44240314-44240849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
421, 433
               

               
Conread position:
               
11-586
               

               
Cow position:
               
chr18:50250970-50251543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 173
               

               
Conread position:
               
11-625
               

               
Cow position:
               
chr18:50848136-50848750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 114
               

               
Conread position:
               
11-638
               

               
Cow position:
               
chr18:44239810-44240437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 147
               

               
Conread position:
               
11-646
               

               
Cow position:
               
chr18:42959994-42959368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
637
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
610, 235
               

               
Conread position:
               
11-700
               

               
Cow position:
               
chr18:40086461-40085780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
699
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 168
               

               
Conread position:
               
11-700
               

               
Cow position:
               
chr18:43023018-43022327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
694
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 245
               

               
Conread position:
               
11-709
               

               
Cow position:
               
chr18:43022766-43022066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
703
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 241
               

               
Conread position:
               
11-709
               

               
Cow position:
               
chr18:44240062-44240762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
701
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
632, 0
               

               
Conread position:
               
12-407
               

               
Cow position:
               
chr18:44153659-44153267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
251, 64
               

               
Conread position:
               
12-512
               

               
Cow position:
               
chr18:40086126-40085633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 85
               

               
Conread position:
               
12-544
               

               
Cow position:
               
chr18:49022784-49023316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 137
               

               
Conread position:
               
12-627
               

               
Cow position:
               
chr18:51812830-51812215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
12-627
               

               
Cow position:
               
chr18:56247759-56247152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 0
               

               
Conread position:
               
12-642
               

               
Cow position:
               
chr18:43175050-43174430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
635
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 169
               

               
Conread position:
               
12-644
               

               
Cow position:
               
chr18:49022616-49023247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
615, 0
               

               
Conread position:
               
12-644
               

               
Cow position:
               
chr18:51789671-51789040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
616, 0
               

               
Conread position:
               
12-668
               

               
Cow position:
               
chr18:52012471-52011815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
666
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
246, 23
               

               
Conread position:
               
13-588
               

               
Cow position:
               
chr18:55523531-55524106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 69
               

               
Conread position:
               
13-625
               

               
Cow position:
               
chr18:50049000-50048388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 19
               

               
Conread position:
               
13-644
               

               
Cow position:
               
chr18:43167511-43168141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
614, 0
               

               
Conread position:
               
14-499
               

               
Cow position:
               
chr18:44153898-44153425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 170
               

               
Conread position:
               
14-556
               

               
Cow position:
               
chr18:50099787-50100329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
328, 318
               

               
Conread position:
               
14-556
               

               
Cow position:
               
chr18:50271601-50272143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
14-625
               

               
Cow position:
               
chr18:53559898-53560509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 169
               

               
Conread position:
               
14-627
               

               
Cow position:
               
chr18:50099367-50099980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 70
               

               
Conread position:
               
14-698
               

               
Cow position:
               
chr18:52446912-52447598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
689
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
453, 447
               

               
Conread position:
               
15-384
               

               
Cow position:
               
chr18:50246470-50246839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
15-385
               

               
Cow position:
               
chr18:40075332-40075702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
15-386
               

               
Cow position:
               
chr18:42744156-42743785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 237
               

               
Conread position:
               
15-492
               

               
Cow position:
               
chr18:56494069-56494543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 167
               

               
Conread position:
               
15-521
               

               
Cow position:
               
chr18:51874197-51874703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 155
               

               
Conread position:
               
15-552
               

               
Cow position:
               
chr18:42674928-42674391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 143
               

               
Conread position:
               
15-560
               

               
Cow position:
               
chr18:55523785-55524330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 65
               

               
Conread position:
               
15-574
               

               
Cow position:
               
chr18:56433944-56434493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 78
               

               
Conread position:
               
15-586
               

               
Cow position:
               
chr18:51367790-51367219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 69
               

               
Conread position:
               
15-621
               

               
Cow position:
               
chr18:56329962-56329356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
15-625
               

               
Cow position:
               
chr18:42837963-42837353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
15-625
               

               
Cow position:
               
chr18:50099284-50099894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
478, 487
               

               
Conread position:
               
15-625
               

               
Cow position:
               
chr18:54979617-54980227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 262
               

               
Conread position:
               
15-625
               

               
Cow position:
               
chr18:56330130-56329520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
613
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 143
               

               
Conread position:
               
15-627
               

               
Cow position:
               
chr18:44184913-44184301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
421, 414
               

               
Conread position:
               
15-627
               

               
Cow position:
               
chr18:50099620-50100232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
322, 335
               

               
Conread position:
               
15-627
               

               
Cow position:
               
chr18:52428362-52428974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 69
               

               
Conread position:
               
15-627
               

               
Cow position:
               
chr18:52433543-52434155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
415, 405
               

               
Conread position:
               
15-627
               

               
Cow position:
               
chr18:53560067-53560679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 81
               

               
Conread position:
               
15-638
               

               
Cow position:
               
chr18:40086712-40086088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 31
               

               
Conread position:
               
15-638
               

               
Cow position:
               
chr18:50099200-50099823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 231
               

               
Conread position:
               
15-643
               

               
Cow position:
               
chr18:33064713-33064086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 76
               

               
Conread position:
               
15-644
               

               
Cow position:
               
chr18:40324659-40324031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
634
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 50
               

               
Conread position:
               
15-644
               

               
Cow position:
               
chr18:50246134-50246762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 154
               

               
Conread position:
               
15-644
               

               
Cow position:
               
chr18:50250894-50251516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 43
               

               
Conread position:
               
15-648
               

               
Cow position:
               
chr18:54966924-54967555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
328, 312
               

               
Conread position:
               
15-654
               

               
Cow position:
               
chr18:41198136-41198775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
15-657
               

               
Cow position:
               
chr18:52428110-52428751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 69
               

               
Conread position:
               
15-670
               

               
Cow position:
               
chr18:50246050-50246707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
661
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
430, 408
               

               
Conread position:
               
15-688
               

               
Cow position:
               
chr18:56433857-56434525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
682
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 166
               

               
Conread position:
               
15-689
               

               
Cow position:
               
chr18:44153975-44153317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
681
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 69
               

               
Conread position:
               
15-702
               

               
Cow position:
               
chr18:41197548-41198237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
691
               

               
Alignm identity:
               
492
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
618, 613
               

               
Conread position:
               
18-321
               

               
Cow position:
               
chr18:33063870-33063566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
290, 0
               

               
Conread position:
               
18-381
               

               
Cow position:
               
chr18:40306985-40307348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
18-402
               

               
Cow position:
               
chr18:53571955-53572326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
67, 44
               

               
Conread position:
               
18-586
               

               
Cow position:
               
chr18:40306313-40306881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
422, 414
               

               
Conread position:
               
18-594
               

               
Cow position:
               
chr18:55008703-55009279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 55
               

               
Conread position:
               
18-625
               

               
Cow position:
               
chr18:22634534-22635139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
45, 63
               

               
Conread position:
               
18-625
               

               
Cow position:
               
chr18:33064626-33064019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
592, 583
               

               
Conread position:
               
18-625
               

               
Cow position:
               
chr18:33064794-33064187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 151
               

               
Conread position:
               
18-625
               

               
Cow position:
               
chr18:53559986-53560593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 140
               

               
Conread position:
               
18-625
               

               
Cow position:
               
chr18:53560154-53560761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 78
               

               
Conread position:
               
18-626
               

               
Cow position:
               
chr18:44253995-44253391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
18-627
               

               
Cow position:
               
chr18:33092962-33092359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
533, 0
               

               
Conread position:
               
18-644
               

               
Cow position:
               
chr18:49033322-49032697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 140
               

               
Conread position:
               
18-648
               

               
Cow position:
               
chr18:54979873-54980500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
634
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 6
               

               
Conread position:
               
18-669
               

               
Cow position:
               
chr18:41198055-41198708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
654
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
625, 0
               

               
Conread position:
               
19-458
               

               
Cow position:
               
chr18:22634786-22635224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
249, 5
               

               
Conread position:
               
19-469
               

               
Cow position:
               
chr18:40075249-40075702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 429
               

               
Conread position:
               
19-503
               

               
Cow position:
               
chr18:56434442-56434926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
87, 91
               

               
Conread position:
               
19-553
               

               
Cow position:
               
chr18:54968014-54968549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 91
               

               
Conread position:
               
19-580
               

               
Cow position:
               
chr18:54993218-54993778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 5
               

               
Conread position:
               
19-621
               

               
Cow position:
               
chr18:55523705-55524307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 158
               

               
Conread position:
               
19-621
               

               
Cow position:
               
chr18:56248098-56247489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 192
               

               
Conread position:
               
19-625
               

               
Cow position:
               
chr18:40074916-40075522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 76
               

               
Conread position:
               
19-625
               

               
Cow position:
               
chr18:53587109-53586500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
613
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 168
               

               
Conread position:
               
19-625
               

               
Cow position:
               
chr18:54992882-54993487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 5
               

               
Conread position:
               
19-625
               

               
Cow position:
               
chr18:56434275-56434879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 5
               

               
Conread position:
               
19-627
               

               
Cow position:
               
chr18:33093045-33092437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
328, 314
               

               
Conread position:
               
19-627
               

               
Cow position:
               
chr18:50059142-50058534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
19-627
               

               
Cow position:
               
chr18:55018194-55018802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 5
               

               
Conread position:
               
19-630
               

               
Cow position:
               
chr18:53498372-53498981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 77
               

               
Conread position:
               
19-644
               

               
Cow position:
               
chr18:43167601-43168225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
608, 0
               

               
Conread position:
               
19-644
               

               
Cow position:
               
chr18:50245718-50246342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 163
               

               
Conread position:
               
19-644
               

               
Cow position:
               
chr18:51367872-51367246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 63
               

               
Conread position:
               
19-644
               

               
Cow position:
               
chr18:51368541-51367917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
634
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 25
               

               
Conread position:
               
19-649
               

               
Cow position:
               
chr18:40086959-40086329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 69
               

               
Conread position:
               
19-687
               

               
Cow position:
               
chr18:55017773-55018443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
675
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 153
               

               
Conread position:
               
20-481
               

               
Cow position:
               
chr18:51970318-51970771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
143, 55
               

               
Conread position:
               
20-543
               

               
Cow position:
               
chr18:14454042-14453519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 70
               

               
Conread position:
               
20-565
               

               
Cow position:
               
chr18:51839331-51838786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
20-586
               

               
Cow position:
               
chr18:53525838-53526404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 224
               

               
Conread position:
               
20-598
               

               
Cow position:
               
chr18:53509384-53509962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 241
               

               
Conread position:
               
20-627
               

               
Cow position:
               
chr18:52447590-52448197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 151
               

               
Conread position:
               
21-386
               

               
Cow position:
               
chr18:49021798-49022164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
287, 307
               

               
Conread position:
               
21-491
               

               
Cow position:
               
chr18:44153723-44153267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
327, 57
               

               
Conread position:
               
21-492
               

               
Cow position:
               
chr18:51969572-51970032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
21-555
               

               
Cow position:
               
chr18:44184487-44183953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 158
               

               
Conread position:
               
21-559
               

               
Cow position:
               
chr18:51969488-51970015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 130
               

               
Conread position:
               
21-618
               

               
Cow position:
               
chr18:42724525-42723928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
262, 268
               

               
Conread position:
               
21-625
               

               
Cow position:
               
chr18:42724777-42724173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
158, 153
               

               
Conread position:
               
21-627
               

               
Cow position:
               
chr18:51751852-51751253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
225, 241
               

               
Conread position:
               
21-627
               

               
Cow position:
               
chr18:51969404-51969999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 137
               

               
Conread position:
               
21-700
               

               
Cow position:
               
chr18:43175293-43174612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
684
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 153
               

               
Conread position:
               
22-416
               

               
Cow position:
               
chr18:53610067-53609674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
369, 378
               

               
Conread position:
               
22-552
               

               
Cow position:
               
chr18:50246309-50246839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
423, 415
               

               
Conread position:
               
22-619
               

               
Cow position:
               
chr18:50245973-50246570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 34
               

               
Conread position:
               
22-623
               

               
Cow position:
               
chr18:55008791-55009390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 97
               

               
Conread position:
               
22-626
               

               
Cow position:
               
chr18:44239989-44240593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 136
               

               
Conread position:
               
22-627
               

               
Cow position:
               
chr18:56128353-56128958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
423, 411
               

               
Conread position:
               
22-628
               

               
Cow position:
               
chr18:43022587-43021981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 68
               

               
Conread position:
               
22-628
               

               
Cow position:
               
chr18:44240241-44240847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 136
               

               
Conread position:
               
22-628
               

               
Cow position:
               
chr18:50099711-50100317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
328, 311
               

               
Conread position:
               
22-631
               

               
Cow position:
               
chr18:50246225-50246834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 245
               

               
Conread position:
               
22-638
               

               
Cow position:
               
chr18:43022839-43022223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 157
               

               
Conread position:
               
22-638
               

               
Cow position:
               
chr18:44184822-44184206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
320, 330
               

               
Conread position:
               
22-649
               

               
Cow position:
               
chr18:41949368-41948743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
606, 0
               

               
Conread position:
               
22-701
               

               
Cow position:
               
chr18:44184654-44183971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
686
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 162
               

               
Conread position:
               
23-229
               

               
Cow position:
               
chr18:43119670-43119464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
23-306
               

               
Cow position:
               
chr18:44397786-44397503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
23-307
               

               
Cow position:
               
chr18:14453139-14452855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
163, 170
               

               
Conread position:
               
23-399
               

               
Cow position:
               
chr18:55523961-55524337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
62, 77
               

               
Conread position:
               
23-433
               

               
Cow position:
               
chr18:43048663-43048256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 302
               

               
Conread position:
               
23-550
               

               
Cow position:
               
chr18:44398038-44397511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
406, 412
               

               
Conread position:
               
23-552
               

               
Cow position:
               
chr18:49021632-49022162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
447, 491
               

               
Conread position:
               
23-561
               

               
Cow position:
               
chr18:44253335-44252808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 71
               

               
Conread position:
               
23-625
               

               
Cow position:
               
chr18:1417815-1418417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
362, 354
               

               
Conread position:
               
23-625
               

               
Cow position:
               
chr18:44184569-44183967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 83
               

               
Conread position:
               
23-625
               

               
Cow position:
               
chr18:53636063-53635461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 166
               

               
Conread position:
               
23-625
               

               
Cow position:
               
chr18:54979793-54980395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 86
               

               
Conread position:
               
23-626
               

               
Cow position:
               
chr18:42675088-42674485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
23-626
               

               
Cow position:
               
chr18:44398122-44397519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 85
               

               
Conread position:
               
23-626
               

               
Cow position:
               
chr18:49032645-49032042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 134
               

               
Conread position:
               
23-627
               

               
Cow position:
               
chr18:42675340-42674736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
414, 401
               

               
Conread position:
               
23-627
               

               
Cow position:
               
chr18:42985243-42984639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 146
               

               
Conread position:
               
23-627
               

               
Cow position:
               
chr18:43023090-43022486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
578, 571
               

               
Conread position:
               
23-627
               

               
Cow position:
               
chr18:50099544-50100148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
313, 321
               

               
Conread position:
               
23-627
               

               
Cow position:
               
chr18:52427866-52428470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 50
               

               
Conread position:
               
23-627
               

               
Cow position:
               
chr18:52433215-52433819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
328, 311
               

               
Conread position:
               
23-628
               

               
Cow position:
               
chr18:42837703-42837098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
575, 569
               

               
Conread position:
               
23-638
               

               
Cow position:
               
chr18:42675424-42674810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
330, 318
               

               
Conread position:
               
23-638
               

               
Cow position:
               
chr18:42837787-42837172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
412, 401
               

               
Conread position:
               
23-638
               

               
Cow position:
               
chr18:42985495-42984880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 147
               

               
Conread position:
               
23-638
               

               
Cow position:
               
chr18:44154302-44153694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 69
               

               
Conread position:
               
23-653
               

               
Cow position:
               
chr18:42827385-42828021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
541, 610
               

               
Conread position:
               
23-657
               

               
Cow position:
               
chr18:52433299-52433932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
637
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 61
               

               
Conread position:
               
23-671
               

               
Cow position:
               
chr18:40075004-40075654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
654
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 109
               

               
Conread position:
               
23-700
               

               
Cow position:
               
chr18:40324735-40324056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
686
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 61
               

               
Conread position:
               
23-700
               

               
Cow position:
               
chr18:54967184-54967860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
685
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
68, 50
               

               
Conread position:
               
23-701
               

               
Cow position:
               
chr18:42790945-42791625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
686
               

               
Alignm identity:
               
477
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 135
               

               
Conread position:
               
23-769
               

               
Cow position:
               
chr18:52447341-52448090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
753
               

               
Alignm identity:
               
494
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 18
               

               
Conread position:
               
24-413
               

               
Cow position:
               
chr18:51969657-51970037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
59, 67
               

               
Conread position:
               
24-445
               

               
Cow position:
               
chr18:51367613-51367193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 133
               

               
Conread position:
               
24-469
               

               
Cow position:
               
chr18:14453786-14453341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
24-474
               

               
Cow position:
               
chr18:52011957-52011504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
150, 157
               

               
Conread position:
               
24-475
               

               
Cow position:
               
chr18:55018450-55018900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 85
               

               
Conread position:
               
24-489
               

               
Cow position:
               
chr18:14453222-14452756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 65
               

               
Conread position:
               
24-491
               

               
Cow position:
               
chr18:54968104-54968570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
77, 85
               

               
Conread position:
               
24-513
               

               
Cow position:
               
chr18:52447930-52448421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 169
               

               
Conread position:
               
24-544
               

               
Cow position:
               
chr18:40306823-40307343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 158
               

               
Conread position:
               
24-558
               

               
Cow position:
               
chr18:56434363-56434895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 60
               

               
Conread position:
               
24-586
               

               
Cow position:
               
chr18:33064872-33064310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 160
               

               
Conread position:
               
24-586
               

               
Cow position:
               
chr18:51765512-51764950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 37
               

               
Conread position:
               
24-586
               

               
Cow position:
               
chr18:51838636-51838084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
37, 32
               

               
Conread position:
               
24-592
               

               
Cow position:
               
chr18:40306235-40306803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 12
               

               
Conread position:
               
24-608
               

               
Cow position:
               
chr18:51812482-51811898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
24-608
               

               
Cow position:
               
chr18:51874129-51874706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 30
               

               
Conread position:
               
24-618
               

               
Cow position:
               
chr18:51368621-51368026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 51
               

               
Conread position:
               
24-621
               

               
Cow position:
               
chr18:52012209-52011612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 235
               

               
Conread position:
               
24-625
               

               
Cow position:
               
chr18:49022712-49023313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
574, 564
               

               
Conread position:
               
24-625
               

               
Cow position:
               
chr18:50271443-50272044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
24-625
               

               
Cow position:
               
chr18:52012377-52011776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 157
               

               
Conread position:
               
24-625
               

               
Cow position:
               
chr18:53559824-53560425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 72
               

               
Conread position:
               
24-625
               

               
Cow position:
               
chr18:54967854-54968453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 85
               

               
Conread position:
               
24-625
               

               
Cow position:
               
chr18:54967938-54968537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
75, 64
               

               
Conread position:
               
24-625
               

               
Cow position:
               
chr18:54979962-54980563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 222
               

               
Conread position:
               
24-625
               

               
Cow position:
               
chr18:54993138-54993739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 55
               

               
Conread position:
               
24-625
               

               
Cow position:
               
chr18:55018282-55018882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 152
               

               
Conread position:
               
24-625
               

               
Cow position:
               
chr18:55067044-55066443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 85
               

               
Conread position:
               
24-625
               

               
Cow position:
               
chr18:55523458-55524059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 223
               

               
Conread position:
               
24-625
               

               
Cow position:
               
chr18:55523626-55524227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 74
               

               
Conread position:
               
24-625
               

               
Cow position:
               
chr18:56316115-56316716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
322, 303
               

               
Conread position:
               
24-626
               

               
Cow position:
               
chr18:51874045-51874640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
412, 114
               

               
Conread position:
               
24-626
               

               
Cow position:
               
chr18:55066960-55066358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 74
               

               
Conread position:
               
24-627
               

               
Cow position:
               
chr18:33064284-33063681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
323, 315
               

               
Conread position:
               
24-627
               

               
Cow position:
               
chr18:52428287-52428890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 69
               

               
Conread position:
               
24-638
               

               
Cow position:
               
chr18:51789323-51788709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 64
               

               
Conread position:
               
24-638
               

               
Cow position:
               
chr18:51789407-51788793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 134
               

               
Conread position:
               
24-644
               

               
Cow position:
               
chr18:50059725-50059106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
624
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
387, 368
               

               
Conread position:
               
24-648
               

               
Cow position:
               
chr18:54992970-54993592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 168
               

               
Conread position:
               
24-649
               

               
Cow position:
               
chr18:33064200-33063576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
603, 0
               

               
Conread position:
               
24-657
               

               
Cow position:
               
chr18:51812566-51811934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
634
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
612, 0
               

               
Conread position:
               
24-670
               

               
Cow position:
               
chr18:42791198-42791846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
651
               

               
Alignm identity:
               
453
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 150
               

               
Conread position:
               
24-680
               

               
Cow position:
               
chr18:42744483-42743825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
659
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
619, 0
               

               
Conread position:
               
24-687
               

               
Cow position:
               
chr18:55017862-55018527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
671
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 240
               

               
Conread position:
               
24-700
               

               
Cow position:
               
chr18:42675255-42674577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
682
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
317, 328
               

               
Conread position:
               
24-700
               

               
Cow position:
               
chr18:42985326-42984648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
681
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
325, 303
               

               
Conread position:
               
24-700
               

               
Cow position:
               
chr18:52447678-52448357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
682
               

               
Alignm identity:
               
474
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
403, 396
               

               
Conread position:
               
24-700
               

               
Cow position:
               
chr18:53586765-53586087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
682
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 244
               

               
Conread position:
               
24-735
               

               
Cow position:
               
chr18:55008541-55009259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
721
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 240
               

               
Conread position:
               
24-764
               

               
Cow position:
               
chr18:43093604-43092861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
748
               

               
Alignm identity:
               
507
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 158
               

               
Conread position:
               
25-626
               

               
Cow position:
               
chr18:22634623-22635224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 167
               

               
Conread position:
               
25-627
               

               
Cow position:
               
chr18:44239740-44240342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 65
               

               
Conread position:
               
25-638
               

               
Cow position:
               
chr18:42985577-42984964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 59
               

               
Conread position:
               
26-649
               

               
Cow position:
               
chr18:43120339-43119718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 131
               

               
Conread position:
               
26-711
               

               
Cow position:
               
chr18:44154470-44153784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
697
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 149
               

               
Conread position:
               
29-625
               

               
Cow position:
               
chr18:53525678-53526275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 405
               

               
Conread position:
               
29-626
               

               
Cow position:
               
chr18:56248172-56247565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
315, 266
               

               
Conread position:
               
29-627
               

               
Cow position:
               
chr18:51789905-51789308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
29-627
               

               
Cow position:
               
chr18:51813064-51812467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 16
               

               
Conread position:
               
29-627
               

               
Cow position:
               
chr18:53509224-53509823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 417
               

               
Conread position:
               
29-640
               

               
Cow position:
               
chr18:51752347-51751738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 16
               

               
Conread position:
               
29-653
               

               
Cow position:
               
chr18:51766094-51765472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 16
               

               
Conread position:
               
30-532
               

               
Cow position:
               
chr18:43048740-43048240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 58
               

               
Conread position:
               
30-553
               

               
Cow position:
               
chr18:55066870-55066347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 154
               

               
Conread position:
               
30-580
               

               
Cow position:
               
chr18:55523380-55523930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
306, 319
               

               
Conread position:
               
30-627
               

               
Cow position:
               
chr18:50022586-50021983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 54
               

               
Conread position:
               
30-656
               

               
Cow position:
               
chr18:56247825-56247208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 11
               

               
Conread position:
               
30-672
               

               
Cow position:
               
chr18:40324812-40324168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
647
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 48
               

               
Conread position:
               
31-644
               

               
Cow position:
               
chr18:51969330-51969931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 59
               

               
Conread position:
               
32-601
               

               
Cow position:
               
chr18:44253901-44253333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 126
               

               
Conread position:
               
32-625
               

               
Cow position:
               
chr18:50848325-50848918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
452, 457
               

               
Conread position:
               
32-668
               

               
Cow position:
               
chr18:33064947-33064310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 5
               

               
Conread position:
               
34-471
               

               
Cow position:
               
chr18:14453296-14452859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 54
               

               
Conread position:
               
34-625
               

               
Cow position:
               
chr18:55523300-55523891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
315, 300
               

               
Conread position:
               
34-644
               

               
Cow position:
               
chr18:50848078-50848684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
613
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 60
               

               
Conread position:
               
34-647
               

               
Cow position:
               
chr18:40306497-40307108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
593, 0
               

               
Conread position:
               
35-388
               

               
Cow position:
               
chr18:56128954-56129305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
179, 0
               

               
Conread position:
               
35-465
               

               
Cow position:
               
chr18:40306918-40307348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
400, 386
               

               
Conread position:
               
35-593
               

               
Cow position:
               
chr18:40306582-40307140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 61
               

               
Conread position:
               
35-619
               

               
Cow position:
               
chr18:55497629-55497045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
65, 61
               

               
Conread position:
               
35-625
               

               
Cow position:
               
chr18:53610474-53609884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 212
               

               
Conread position:
               
35-625
               

               
Cow position:
               
chr18:56128114-56128704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 153
               

               
Conread position:
               
35-631
               

               
Cow position:
               
chr18:40306750-40307346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
35-644
               

               
Cow position:
               
chr18:49022305-49022911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 49
               

               
Conread position:
               
35-648
               

               
Cow position:
               
chr18:54993065-54993676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
621
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 53
               

               
Conread position:
               
35-700
               

               
Cow position:
               
chr18:43094001-43093346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
672
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 135
               

               
Conread position:
               
36-391
               

               
Cow position:
               
chr18:55066696-55066341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
36-546
               

               
Cow position:
               
chr18:51765416-51764906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 122
               

               
Conread position:
               
36-584
               

               
Cow position:
               
chr18:52012113-52011565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 58
               

               
Conread position:
               
36-584
               

               
Cow position:
               
chr18:53610221-53609674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
128, 107
               

               
Conread position:
               
36-599
               

               
Cow position:
               
chr18:56330025-56329462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 140
               

               
Conread position:
               
36-602
               

               
Cow position:
               
chr18:53635714-53635150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
553, 0
               

               
Conread position:
               
36-617
               

               
Cow position:
               
chr18:54967113-54967694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 241
               

               
Conread position:
               
36-625
               

               
Cow position:
               
chr18:55017958-55018547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 152
               

               
Conread position:
               
36-625
               

               
Cow position:
               
chr18:55067116-55066527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 60
               

               
Conread position:
               
36-625
               

               
Cow position:
               
chr18:56329773-56329184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
36-625
               

               
Cow position:
               
chr18:56329857-56329268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
396, 409
               

               
Conread position:
               
36-626
               

               
Cow position:
               
chr18:51400526-51401116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 228
               

               
Conread position:
               
36-627
               

               
Cow position:
               
chr18:51765752-51765161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 143
               

               
Conread position:
               
36-627
               

               
Cow position:
               
chr18:51839483-51838892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 143
               

               
Conread position:
               
36-627
               

               
Cow position:
               
chr18:53635546-53634956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
533, 511
               

               
Conread position:
               
36-627
               

               
Cow position:
               
chr18:56329437-56328846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
396, 408
               

               
Conread position:
               
36-630
               

               
Cow position:
               
chr18:53610137-53609539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
66, 60
               

               
Conread position:
               
36-648
               

               
Cow position:
               
chr18:53559752-53560362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
404, 396
               

               
Conread position:
               
36-689
               

               
Cow position:
               
chr18:51789815-51789160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
659
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 146
               

               
Conread position:
               
37-644
               

               
Cow position:
               
chr18:52427544-52428150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
402, 372
               

               
Conread position:
               
39-625
               

               
Cow position:
               
chr18:33065109-33064523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 167
               

               
Conread position:
               
39-625
               

               
Cow position:
               
chr18:54966864-54967450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
322, 294
               

               
Conread position:
               
39-649
               

               
Cow position:
               
chr18:56493841-56494449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 51
               

               
Conread position:
               
40-625
               

               
Cow position:
               
chr18:56316047-56316632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 51
               

               
Conread position:
               
41-625
               

               
Cow position:
               
chr18:42744718-42744134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
557, 551
               

               
Conread position:
               
42-588
               

               
Cow position:
               
chr18:51838786-51838245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
187, 182
               

               
Conread position:
               
43-586
               

               
Cow position:
               
chr18:56128037-56128581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 379
               

               
Conread position:
               
43-594
               

               
Cow position:
               
chr18:53636128-53635576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 379
               

               
Conread position:
               
43-627
               

               
Cow position:
               
chr18:40324881-40324299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 10
               

               
Conread position:
               
43-627
               

               
Cow position:
               
chr18:49033382-49032797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
43-644
               

               
Cow position:
               
chr18:44398439-44397838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 378
               

               
Conread position:
               
44-625
               

               
Cow position:
               
chr18:33093103-33092523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
303, 16
               

               
Conread position:
               
44-625
               

               
Cow position:
               
chr18:56330185-56329604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
44-672
               

               
Cow position:
               
chr18:50049225-50048591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 118
               

               
Conread position:
               
45-587
               

               
Cow position:
               
chr18:53610380-53609838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
296, 292
               

               
Conread position:
               
45-625
               

               
Cow position:
               
chr18:40306171-40306752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
46-347
               

               
Cow position:
               
chr18:51873703-51874005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
46-627
               

               
Cow position:
               
chr18:50295192-50295773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
506, 514
               

               
Conread position:
               
46-644
               

               
Cow position:
               
chr18:51839557-51838960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
392, 399
               

               
Conread position:
               
47-649
               

               
Cow position:
               
chr18:49021492-49022089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
48-625
               

               
Cow position:
               
chr18:49022234-49022809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
39, 49
               

               
Conread position:
               
50-692
               

               
Cow position:
               
chr18:51400288-51400932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
645
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
585, 0
               

               
Conread position:
               
51-588
               

               
Cow position:
               
chr18:53610542-53610005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 48
               

               
Conread position:
               
51-625
               

               
Cow position:
               
chr18:1417927-1418501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
248, 242
               

               
Conread position:
               
51-669
               

               
Cow position:
               
chr18:41197501-41198120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
621
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
592, 5
               

               
Conread position:
               
58-627
               

               
Cow position:
               
chr18:40074874-40075440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 36
               

               
Conread position:
               
59-627
               

               
Cow position:
               
chr18:53559691-53560259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
40, 28
               

               
Conread position:
               
60-649
               

               
Cow position:
               
chr18:43175590-43175003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 117
               

               
Conread position:
               
64-644
               

               
Cow position:
               
chr18:50098913-50099492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
278, 270
               

               
Conread position:
               
68-311
               

               
Cow position:
               
chr18:43053433-43053190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
68-625
               

               
Cow position:
               
chr18:54979418-54979975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
287, 273
               

               
Conread position:
               
68-625
               

               
Cow position:
               
chr18:54992678-54993235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
104, 120
               

               
Conread position:
               
69-587
               

               
Cow position:
               
chr18:55497679-55497161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
286, 279
               

               
Conread position:
               
75-621
               

               
Cow position:
               
chr18:43094207-43093676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
454, 46
               

               
Conread position:
               
84-637
               

               
Cow position:
               
chr18:43167417-43167968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
18, 73
               

               
Conread position:
               
87-644
               

               
Cow position:
               
chr18:53587122-53586566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 9
               

               
Conread position:
               
90-673
               

               
Cow position:
               
chr18:50271425-50272010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
467, 456
               

               
Conread position:
               
93-644
               

               
Cow position:
               
chr18:42960332-42959782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
340, 327
               

               
Conread position:
               
99-649
               

               
Cow position:
               
chr18:41949375-41948827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
529, 0
               

               
Conread position:
               
99-657
               

               
Cow position:
               
chr18:44184913-44184356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
552, 529
               

               
Conread position:
               
99-701
               

               
Cow position:
               
chr18:42837963-42837357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
536, 0
               

               
Conread position:
               
100-627
               

               
Cow position:
               
chr18:50245715-50246242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 45
               

               
Conread position:
               
101-627
               

               
Cow position:
               
chr18:44398464-44397938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
102-644
               

               
Cow position:
               
chr18:50049251-50048706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 240
               

               
Conread position:
               
103-699
               

               
Cow position:
               
chr18:40086959-40086359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 55
               

               
Conread position:
               
104-638
               

               
Cow position:
               
chr18:14454042-14453508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
346, 323
               

               
Conread position:
               
108-449
               

               
Cow position:
               
chr18:56267478-56267137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
62, 67
               

               
Conread position:
               
109-627
               

               
Cow position:
               
chr18:52432881-52433399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 137
               

               
Conread position:
               
109-708
               

               
Cow position:
               
chr18:52427532-52428133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 137
               

               
Conread position:
               
113-670
               

               
Cow position:
               
chr18:33093119-33092560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 310
               

               
Conread position:
               
114-437
               

               
Cow position:
               
chr18:51873689-51874011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
114-646
               

               
Cow position:
               
chr18:43048740-43048210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
464, 420
               

               
Conread position:
               
116-700
               

               
Cow position:
               
chr18:42744727-42744141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
530, 512
               

               
Conread position:
               
119-559
               

               
Cow position:
               
chr18:14453295-14452855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 129
               

               
Conread position:
               
120-588
               

               
Cow position:
               
chr18:42724594-42724126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
120-627
               

               
Cow position:
               
chr18:55067116-55066609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 64
               

               
Conread position:
               
122-625
               

               
Cow position:
               
chr18:33065110-33064607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
120, 135
               

               
Conread position:
               
126-644
               

               
Cow position:
               
chr18:51400280-51400797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 49
               

               
Conread position:
               
130-644
               

               
Cow position:
               
chr18:43120403-43119890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 28
               

               
Conread position:
               
132-627
               

               
Cow position:
               
chr18:51969029-51969506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 47
               

               
Conread position:
               
135-669
               

               
Cow position:
               
chr18:41197500-41198036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
508, 492
               

               
Conread position:
               
138-627
               

               
Cow position:
               
chr18:53559686-53560175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 34
               

               
Conread position:
               
138-648
               

               
Cow position:
               
chr18:53571823-53572318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
45, 34
               

               
Conread position:
               
141-638
               

               
Cow position:
               
chr18:50098906-50099403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 285
               

               
Conread position:
               
149-670
               

               
Cow position:
               
chr18:42790903-42791426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 178
               

               
Conread position:
               
151-391
               

               
Cow position:
               
chr18:43053434-43053194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
20, 28
               

               
Conread position:
               
151-583
               

               
Cow position:
               
chr18:54979417-54979849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
34, 23
               

               
Conread position:
               
151-626
               

               
Cow position:
               
chr18:54992677-54993152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
34, 23
               

               
Conread position:
               
153-625
               

               
Cow position:
               
chr18:50031123-50030652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
326, 179
               

               
Conread position:
               
159-625
               

               
Cow position:
               
chr18:50281623-50282089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 179
               

               
Conread position:
               
172-636
               

               
Cow position:
               
chr18:41949386-41948922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
393, 389
               

               
Conread position:
               
176-701
               

               
Cow position:
               
chr18:42837970-42837441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
459, 506
               

               
Conread position:
               
184-469
               

               
Cow position:
               
chr18:51873674-51873959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
17, 27
               

               
Conread position:
               
185-475
               

               
Cow position:
               
chr18:43053485-43053194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
187-627
               

               
Cow position:
               
chr18:43175706-43175275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
188-638
               

               
Cow position:
               
chr18:51970318-51970760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
139, 60
               

               
Conread position:
               
200-556
               

               
Cow position:
               
chr18:56264973-56264624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
144, 32
               

               
Conread position:
               
200-638
               

               
Cow position:
               
chr18:42960471-42960039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
202-627
               

               
Cow position:
               
chr18:51874055-51874473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
312, 104
               

               
Conread position:
               
202-656
               

               
Cow position:
               
chr18:43175850-43175415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
449, 64
               

               
Conread position:
               
203-555
               

               
Cow position:
               
chr18:51970416-51970761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
237, 130
               

               
Conread position:
               
203-625
               

               
Cow position:
               
chr18:53497965-53498390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
312, 46
               

               
Conread position:
               
203-627
               

               
Cow position:
               
chr18:14453295-14452871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 57
               

               
Conread position:
               
204-627
               

               
Cow position:
               
chr18:1417828-1418251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 94
               

               
Conread position:
               
205-638
               

               
Cow position:
               
chr18:44398444-44398011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 16
               

               
Conread position:
               
206-638
               

               
Cow position:
               
chr18:42960546-42960123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
155, 51
               

               
Conread position:
               
206-649
               

               
Cow position:
               
chr18:43094163-43093725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
430, 51
               

               
Conread position:
               
207-627
               

               
Cow position:
               
chr18:33065109-33064689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
167, 159
               

               
Conread position:
               
209-627
               

               
Cow position:
               
chr18:40324966-40324551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 12
               

               
Conread position:
               
212-586
               

               
Cow position:
               
chr18:40306170-40306545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
221-625
               

               
Cow position:
               
chr18:54992663-54993067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
37, 47
               

               
Conread position:
               
221-648
               

               
Cow position:
               
chr18:54979403-54979828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
37, 47
               

               
Conread position:
               
237-637
               

               
Cow position:
               
chr18:53587140-53586741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
64, 27
               

               
Conread position:
               
259-627
               

               
Cow position:
               
chr18:51368805-51368437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
101, 63
               

               
Conread position:
               
261-644
               

               
Cow position:
               
chr18:51400247-51400629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
367, 0
               

               
Conread position:
               
262-688
               

               
Cow position:
               
chr18:51400164-51400592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
373, 399
               

               
Conread position:
               
272-702
               

               
Cow position:
               
chr18:42790858-42791290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 165
               

               
Conread position:
               
275-587
               

               
Cow position:
               
chr18:56128102-56128414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
275-708
               

               
Cow position:
               
chr18:43023090-43022655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
360, 407
               

               
Conread position:
               
276-588
               

               
Cow position:
               
chr18:56330205-56329893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
154, 144
               

               
Conread position:
               
276-625
               

               
Cow position:
               
chr18:51368621-51368271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
62, 51
               

               
Conread position:
               
277-708
               

               
Cow position:
               
chr18:44239740-44240173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
196, 203
               

               
Conread position:
               
281-625
               

               
Cow position:
               
chr18:50022587-50022240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
65, 58
               

               
Conread position:
               
281-633
               

               
Cow position:
               
chr18:43048741-43048389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 58
               

               
Conread position:
               
282-599
               

               
Cow position:
               
chr18:51873689-51874005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
288-551
               

               
Cow position:
               
chr18:51751340-51751081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
164, 188
               

               
Conread position:
               
288-628
               

               
Cow position:
               
chr18:55067116-55066776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 53
               

               
Conread position:
               
288-631
               

               
Cow position:
               
chr18:53525686-53526029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
142, 132
               

               
Conread position:
               
289-560
               

               
Cow position:
               
chr18:43053464-43053193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
291-586
               

               
Cow position:
               
chr18:50251789-50252082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
147, 101
               

               
Conread position:
               
291-638
               

               
Cow position:
               
chr18:50250839-50251175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
294-638
               

               
Cow position:
               
chr18:51838786-51838444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
284, 196
               

               
Conread position:
               
308-644
               

               
Cow position:
               
chr18:50098905-50099240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
319, 0
               

               
Conread position:
               
309-641
               

               
Cow position:
               
chr18:56128052-56128383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
301, 291
               

               
Conread position:
               
312-628
               

               
Cow position:
               
chr18:53559692-53560008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
40, 29
               

               
Conread position:
               
333-700
               

               
Cow position:
               
chr18:42837981-42837612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
310, 361
               

               
Conread position:
               
345-638
               

               
Cow position:
               
chr18:44184919-44184626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
345-644
               

               
Cow position:
               
chr18:44154487-44154186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
108, 286
               

               
Conread position:
               
350-626
               

               
Cow position:
               
chr18:44239729-44240005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
83, 70
               

               
Conread position:
               
350-649
               

               
Cow position:
               
chr18:42985588-42985291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
250, 240
               

               
Conread position:
               
359-638
               

               
Cow position:
               
chr18:1417815-1418094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
67, 76
               

               
Conread position:
               
366-701
               

               
Cow position:
               
chr18:51873689-51874025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
64, 16
               

               
Conread position:
               
370-638
               

               
Cow position:
               
chr18:40306161-40306429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
21, 11
               

               
Conread position:
               
372-591
               

               
Cow position:
               
chr18:51969018-51969236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
396-638
               

               
Cow position:
               
chr18:56316067-56316309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
402-638
               

               
Cow position:
               
chr18:43053435-43053199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
434-627
               

               
Cow position:
               
chr18:51874035-51874221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
453-700
               

               
Cow position:
               
chr18:43048737-43048488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
190, 0
               
Show alignments to all cow chromosomes.