Cow genome map
| Conread name: | Ss1.1-ruio05_f13.5.5 |
| Conread position: | 2-541 |
| Cow position: | chr21:12608468-12607929 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 334 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 267, 250 |
| Conread position: | 2-604 |
| Cow position: | chr21:12608888-12608286 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 146 |
| Conread position: | 3-303 |
| Cow position: | chr21:34222841-34222541 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 199 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 161, 155 |
| Conread position: | 3-586 |
| Cow position: | chr21:12608803-12608220 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 353 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 61, 67 |
| Conread position: | 5-621 |
| Cow position: | chr21:12608633-12608017 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 371 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 65, 59 |
| Conread position: | 15-471 |
| Cow position: | chr21:34222997-34222541 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 342, 336 |
| Conread position: | 15-625 |
| Cow position: | chr21:12608707-12608097 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 63 |
| Conread position: | 20-502 |
| Cow position: | chr21:34223076-34222594 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 221 |
| Conread position: | 24-597 |
| Cow position: | chr21:34223153-34222584 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 40 |
| Conread position: | 29-594 |
| Cow position: | chr21:12658815-12659382 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 349 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 13, 131 |
| Conread position: | 44-587 |
| Cow position: | chr21:12608930-12608387 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 331 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 295, 283 |
| Conread position: | 45-541 |
| Cow position: | chr21:12659505-12660001 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 299 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 307, 303 |
| Conread position: | 212-621 |
| Cow position: | chr21:34223052-34222643 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 265 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 155, 151 |
| Conread position: | 272-625 |
| Cow position: | chr21:34223076-34222723 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 227 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 186, 160 |
Show alignments to all cow chromosomes.