Cow genome map

Conread name: Ss1.1-ruio05_f13.5.5

Conread position: 2-544
Cow position:
Alignm length: 544
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 338

Conread position: 2-546
Cow position:
Alignm length: 545
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-625
Cow position:
Alignm length: 625
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 76

Conread position: 2-637
Cow position:
Alignm length: 638
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 611, 606

Conread position: 3-467
Cow position:
Alignm length: 465
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-481
Cow position:
Alignm length: 482
Alignm identity: 303
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 341, 336

Conread position: 3-625
Cow position:
Alignm length: 623
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-625
Cow position:
Alignm length: 624
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 344, 337

Conread position: 3-644
Cow position:
Alignm length: 645
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 85

Conread position: 3-659
Cow position:
Alignm length: 657
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 624, 0

Conread position: 3-753
Cow position:
Alignm length: 758
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 157

Conread position: 5-625
Cow position:
Alignm length: 623
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 51

Conread position: 5-626
Cow position:
Alignm length: 623
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 608, 603

Conread position: 5-641
Cow position:
Alignm length: 640
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 244

Conread position: 9-471
Cow position:
Alignm length: 463
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 9-567
Cow position:
Alignm length: 561
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 61

Conread position: 9-625
Cow position:
Alignm length: 618
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 587, 583

Conread position: 9-626
Cow position:
Alignm length: 619
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 495, 506

Conread position: 9-638
Cow position:
Alignm length: 631
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 587, 581

Conread position: 9-644
Cow position:
Alignm length: 637
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 80

Conread position: 15-323
Cow position:
Alignm length: 311
Alignm identity: 209
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 84, 72

Conread position: 15-625
Cow position:
Alignm length: 613
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 398, 24

Conread position: 15-673
Cow position:
Alignm length: 662
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 323, 315

Conread position: 24-306
Cow position:
Alignm length: 285
Alignm identity: 197
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 24, 31

Conread position: 25-698
Cow position:
Alignm length: 676
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 618, 0

Conread position: 44-387
Cow position:
Alignm length: 344
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 111-491
Cow position:
Alignm length: 382
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 68

Conread position: 132-354
Cow position:
Alignm length: 224
Alignm identity: 149
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 131, 121

Conread position: 139-764
Cow position:
Alignm length: 632
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 30

Conread position: 142-685
Cow position:
Alignm length: 549
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 26

Conread position: 214-606
Cow position:
Alignm length: 395
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 125

Conread position: 226-437
Cow position:
Alignm length: 213
Alignm identity: 143
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 121, 99

Conread position: 279-521
Cow position:
Alignm length: 244
Alignm identity: 158
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 152, 130

Conread position: 280-628
Cow position:
Alignm length: 350
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 141

Conread position: 379-599
Cow position:
Alignm length: 223
Alignm identity: 150
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 136, 114

Show alignments to all cow chromosomes.