Cow genome map

Conread name: Ss1.1-ruio05_f13.5.5

Conread position: 2-294
Cow position:
Alignm length: 294
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 248

Conread position: 2-496
Cow position:
Alignm length: 495
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-627
Cow position:
Alignm length: 628
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 156

Conread position: 2-632
Cow position:
Alignm length: 634
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 246

Conread position: 2-644
Cow position:
Alignm length: 643
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 626, 0

Conread position: 3-407
Cow position:
Alignm length: 408
Alignm identity: 261
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 255, 264

Conread position: 3-617
Cow position:
Alignm length: 615
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-628
Cow position:
Alignm length: 626
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-702
Cow position:
Alignm length: 708
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 27

Conread position: 3-760
Cow position:
Alignm length: 764
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 429, 442

Conread position: 4-214
Cow position:
Alignm length: 211
Alignm identity: 141
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 4-625
Cow position:
Alignm length: 625
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 4-627
Cow position:
Alignm length: 624
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 4-708
Cow position:
Alignm length: 707
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 639, 0

Conread position: 4-765
Cow position:
Alignm length: 766
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 657, 623

Conread position: 5-627
Cow position:
Alignm length: 624
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 440, 432

Conread position: 5-649
Cow position:
Alignm length: 645
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-700
Cow position:
Alignm length: 702
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 166

Conread position: 6-383
Cow position:
Alignm length: 378
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-627
Cow position:
Alignm length: 625
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 85

Conread position: 6-644
Cow position:
Alignm length: 639
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 622, 0

Conread position: 6-644
Cow position:
Alignm length: 641
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 152

Conread position: 6-644
Cow position:
Alignm length: 639
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 622, 0

Conread position: 6-701
Cow position:
Alignm length: 706
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 177

Conread position: 6-702
Cow position:
Alignm length: 699
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 637, 0

Conread position: 8-644
Cow position:
Alignm length: 637
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 620, 0

Conread position: 9-551
Cow position:
Alignm length: 545
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 159

Conread position: 12-627
Cow position:
Alignm length: 616
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 15-324
Cow position:
Alignm length: 311
Alignm identity: 194
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 254, 247

Conread position: 15-547
Cow position:
Alignm length: 537
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 242

Conread position: 15-631
Cow position:
Alignm length: 618
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 583, 577

Conread position: 15-644
Cow position:
Alignm length: 631
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 26

Conread position: 15-644
Cow position:
Alignm length: 631
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 268

Conread position: 15-672
Cow position:
Alignm length: 661
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 593, 598

Conread position: 18-688
Cow position:
Alignm length: 679
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 163

Conread position: 18-700
Cow position:
Alignm length: 690
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 57

Conread position: 19-386
Cow position:
Alignm length: 369
Alignm identity: 239
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 324, 5

Conread position: 23-378
Cow position:
Alignm length: 358
Alignm identity: 236
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 148, 159

Conread position: 23-455
Cow position:
Alignm length: 436
Alignm identity: 283
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 79, 53

Conread position: 23-502
Cow position:
Alignm length: 481
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 135

Conread position: 24-634
Cow position:
Alignm length: 611
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 604, 0

Conread position: 24-639
Cow position:
Alignm length: 620
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 64

Conread position: 31-644
Cow position:
Alignm length: 618
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 69

Conread position: 48-701
Cow position:
Alignm length: 659
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 595, 579

Conread position: 63-542
Cow position:
Alignm length: 484
Alignm identity: 300
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 273, 288

Conread position: 65-644
Cow position:
Alignm length: 581
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 228

Conread position: 101-625
Cow position:
Alignm length: 527
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 57

Conread position: 151-631
Cow position:
Alignm length: 483
Alignm identity: 305
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 348, 269

Conread position: 231-711
Cow position:
Alignm length: 482
Alignm identity: 296
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 430, 271

Conread position: 269-672
Cow position:
Alignm length: 407
Alignm identity: 263
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 78, 58

Conread position: 280-700
Cow position:
Alignm length: 427
Alignm identity: 274
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 20, 29

Show alignments to all cow chromosomes.