Cow genome map
| Conread name: | Ss1.1-ruio09_c16.5 | 
| Conread position: | 314-810 | 
| Cow position: | chr6:56808652-56808154 (view UCSC Genome Browser custom track) | 
| Alignm length: | 499 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 348, 0 | 
| Conread position: | 379-754 | 
| Cow position: | chr6:57397241-57397625 (view UCSC Genome Browser custom track) | 
| Alignm length: | 389 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 153, 44 | 
| Conread position: | 386-836 | 
| Cow position: | chr6:25410115-25410567 (view UCSC Genome Browser custom track) | 
| Alignm length: | 454 | 
| Alignm identity: | 290 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 161, 151 | 
| Conread position: | 387-836 | 
| Cow position: | chr6:10865602-10866051 (view UCSC Genome Browser custom track) | 
| Alignm length: | 453 | 
| Alignm identity: | 323 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 160, 14 | 
| Conread position: | 395-648 | 
| Cow position: | chr6:17326768-17326509 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 14, 203 | 
| Conread position: | 398-751 | 
| Cow position: | chr6:23987218-23986861 (view UCSC Genome Browser custom track) | 
| Alignm length: | 360 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 136, 288 | 
| Conread position: | 402-629 | 
| Cow position: | chr6:7302438-7302663 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 145, 26 | 
| Conread position: | 407-758 | 
| Cow position: | chr6:10337510-10337166 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 222, 171 | 
| Conread position: | 407-811 | 
| Cow position: | chr6:31568168-31567764 (view UCSC Genome Browser custom track) | 
| Alignm length: | 407 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 143, 102 | 
| Conread position: | 413-746 | 
| Cow position: | chr6:49707062-49706728 (view UCSC Genome Browser custom track) | 
| Alignm length: | 335 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 248, 0 | 
| Conread position: | 414-598 | 
| Cow position: | chr6:47923768-47923576 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 414-617 | 
| Cow position: | chr6:57777530-57777327 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 120, 35 | 
| Conread position: | 414-661 | 
| Cow position: | chr6:42617166-42617408 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 65, 99 | 
| Conread position: | 414-745 | 
| Cow position: | chr6:55573575-55573238 (view UCSC Genome Browser custom track) | 
| Alignm length: | 340 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 4e-38 | 
| Alignm gaps (pig, cow): | 109, 36 | 
| Conread position: | 414-746 | 
| Cow position: | chr6:12506040-12505709 (view UCSC Genome Browser custom track) | 
| Alignm length: | 339 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 119, 54 | 
| Conread position: | 414-746 | 
| Cow position: | chr6:38797829-38798168 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 7.9874e-44 | 
| Alignm gaps (pig, cow): | 114, 100 | 
| Conread position: | 414-751 | 
| Cow position: | chr6:32427786-32428120 (view UCSC Genome Browser custom track) | 
| Alignm length: | 343 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 5e-40 | 
| Alignm gaps (pig, cow): | 91, 144 | 
| Conread position: | 414-754 | 
| Cow position: | chr6:58707810-58707453 (view UCSC Genome Browser custom track) | 
| Alignm length: | 358 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 48, 0 | 
| Conread position: | 415-546 | 
| Cow position: | chr6:1498848-1498978 (view UCSC Genome Browser custom track) | 
| Alignm length: | 133 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 100, 105 | 
| Conread position: | 415-565 | 
| Cow position: | chr6:2366606-2366451 (view UCSC Genome Browser custom track) | 
| Alignm length: | 157 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 110, 16 | 
| Conread position: | 415-592 | 
| Cow position: | chr6:60379851-60380028 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 7e-32 | 
| Alignm gaps (pig, cow): | 132, 119 | 
| Conread position: | 415-619 | 
| Cow position: | chr6:47155069-47155269 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 81, 25 | 
| Conread position: | 415-640 | 
| Cow position: | chr6:1468251-1468029 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 78, 155 | 
| Conread position: | 415-648 | 
| Cow position: | chr6:59620178-59620412 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 144, 0 | 
| Conread position: | 415-650 | 
| Cow position: | chr6:11466383-11466143 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 110, 53 | 
| Conread position: | 415-651 | 
| Cow position: | chr6:32665118-32665354 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 132, 122 | 
| Conread position: | 415-664 | 
| Cow position: | chr6:6459797-6460047 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 246, 0 | 
| Conread position: | 415-669 | 
| Cow position: | chr6:89561-89312 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 247, 69 | 
| Conread position: | 415-669 | 
| Cow position: | chr6:1834682-1834934 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 246, 125 | 
| Conread position: | 415-679 | 
| Cow position: | chr6:65866740-65866476 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 57, 126 | 
| Conread position: | 415-688 | 
| Cow position: | chr6:28161097-28161368 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 132, 53 | 
| Conread position: | 415-693 | 
| Cow position: | chr6:50973616-50973340 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 126, 207 | 
| Conread position: | 415-695 | 
| Cow position: | chr6:67950469-67950750 (view UCSC Genome Browser custom track) | 
| Alignm length: | 284 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 251, 75 | 
| Conread position: | 415-727 | 
| Cow position: | chr6:34405297-34404982 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 88, 58 | 
| Conread position: | 415-728 | 
| Cow position: | chr6:6817293-6817605 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 114, 61 | 
| Conread position: | 415-728 | 
| Cow position: | chr6:15471124-15470813 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 116, 53 | 
| Conread position: | 415-737 | 
| Cow position: | chr6:62015184-62015506 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 246, 144 | 
| Conread position: | 415-743 | 
| Cow position: | chr6:17050058-17050388 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 244, 277 | 
| Conread position: | 415-754 | 
| Cow position: | chr6:5302861-5302526 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 112 | 
| Conread position: | 415-773 | 
| Cow position: | chr6:24242973-24243326 (view UCSC Genome Browser custom track) | 
| Alignm length: | 363 | 
| Alignm identity: | 264 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 52, 72 | 
| Conread position: | 415-806 | 
| Cow position: | chr6:43621707-43622094 (view UCSC Genome Browser custom track) | 
| Alignm length: | 393 | 
| Alignm identity: | 282 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 245, 122 | 
| Conread position: | 415-807 | 
| Cow position: | chr6:7253900-7253495 (view UCSC Genome Browser custom track) | 
| Alignm length: | 407 | 
| Alignm identity: | 288 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 133, 103 | 
| Conread position: | 415-807 | 
| Cow position: | chr6:16518336-16517931 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 105, 284 | 
| Conread position: | 415-810 | 
| Cow position: | chr6:49579785-49580182 (view UCSC Genome Browser custom track) | 
| Alignm length: | 399 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 132, 122 | 
| Conread position: | 415-831 | 
| Cow position: | chr6:47039523-47039127 (view UCSC Genome Browser custom track) | 
| Alignm length: | 420 | 
| Alignm identity: | 290 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 245, 143 | 
| Conread position: | 415-836 | 
| Cow position: | chr6:45694551-45694972 (view UCSC Genome Browser custom track) | 
| Alignm length: | 426 | 
| Alignm identity: | 308 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 7, 18 | 
| Conread position: | 415-837 | 
| Cow position: | chr6:52120770-52121195 (view UCSC Genome Browser custom track) | 
| Alignm length: | 434 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 88, 102 | 
| Conread position: | 415-852 | 
| Cow position: | chr6:21312217-21311776 (view UCSC Genome Browser custom track) | 
| Alignm length: | 447 | 
| Alignm identity: | 330 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 107, 75 | 
| Conread position: | 415-853 | 
| Cow position: | chr6:1278973-1278535 (view UCSC Genome Browser custom track) | 
| Alignm length: | 447 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 58, 126 | 
| Conread position: | 415-854 | 
| Cow position: | chr6:27526317-27525877 (view UCSC Genome Browser custom track) | 
| Alignm length: | 443 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 246, 176 | 
| Conread position: | 415-854 | 
| Cow position: | chr6:35873047-35872610 (view UCSC Genome Browser custom track) | 
| Alignm length: | 444 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 245, 142 | 
| Conread position: | 415-854 | 
| Cow position: | chr6:41232152-41232588 (view UCSC Genome Browser custom track) | 
| Alignm length: | 444 | 
| Alignm identity: | 317 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 246, 53 | 
| Conread position: | 415-854 | 
| Cow position: | chr6:52556936-52556501 (view UCSC Genome Browser custom track) | 
| Alignm length: | 445 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 58, 225 | 
| Conread position: | 415-860 | 
| Cow position: | chr6:19719258-19719709 (view UCSC Genome Browser custom track) | 
| Alignm length: | 453 | 
| Alignm identity: | 322 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 132, 122 | 
| Conread position: | 415-860 | 
| Cow position: | chr6:25822460-25822024 (view UCSC Genome Browser custom track) | 
| Alignm length: | 449 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 247, 141 | 
| Conread position: | 415-860 | 
| Cow position: | chr6:41193035-41193482 (view UCSC Genome Browser custom track) | 
| Alignm length: | 452 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 158, 309 | 
| Conread position: | 415-860 | 
| Cow position: | chr6:51674453-51674893 (view UCSC Genome Browser custom track) | 
| Alignm length: | 457 | 
| Alignm identity: | 317 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 243, 53 | 
| Conread position: | 415-860 | 
| Cow position: | chr6:53739979-53740427 (view UCSC Genome Browser custom track) | 
| Alignm length: | 451 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 246, 266 | 
| Conread position: | 415-860 | 
| Cow position: | chr6:67553920-67554366 (view UCSC Genome Browser custom track) | 
| Alignm length: | 450 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 132, 39 | 
| Conread position: | 415-861 | 
| Cow position: | chr6:58439530-58439941 (view UCSC Genome Browser custom track) | 
| Alignm length: | 448 | 
| Alignm identity: | 325 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 50, 136 | 
| Conread position: | 415-862 | 
| Cow position: | chr6:65862224-65862671 (view UCSC Genome Browser custom track) | 
| Alignm length: | 454 | 
| Alignm identity: | 326 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 246, 353 | 
| Conread position: | 415-864 | 
| Cow position: | chr6:11638200-11637767 (view UCSC Genome Browser custom track) | 
| Alignm length: | 453 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 246, 53 | 
| Conread position: | 415-864 | 
| Cow position: | chr6:39358793-39358361 (view UCSC Genome Browser custom track) | 
| Alignm length: | 452 | 
| Alignm identity: | 328 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 247, 72 | 
| Conread position: | 415-869 | 
| Cow position: | chr6:66304300-66303850 (view UCSC Genome Browser custom track) | 
| Alignm length: | 461 | 
| Alignm identity: | 334 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 246, 98 | 
| Conread position: | 416-668 | 
| Cow position: | chr6:15181818-15182066 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 121, 7 | 
| Conread position: | 416-733 | 
| Cow position: | chr6:41868280-41867962 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 110, 204 | 
| Conread position: | 416-817 | 
| Cow position: | chr6:44372409-44372006 (view UCSC Genome Browser custom track) | 
| Alignm length: | 414 | 
| Alignm identity: | 282 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 200 | 
| Conread position: | 416-861 | 
| Cow position: | chr6:3979122-3978682 (view UCSC Genome Browser custom track) | 
| Alignm length: | 452 | 
| Alignm identity: | 333 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 132, 118 | 
| Conread position: | 417-626 | 
| Cow position: | chr6:66453041-66453256 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 108, 0 | 
| Conread position: | 417-860 | 
| Cow position: | chr6:18049489-18049044 (view UCSC Genome Browser custom track) | 
| Alignm length: | 455 | 
| Alignm identity: | 325 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 9, 268 | 
| Conread position: | 418-660 | 
| Cow position: | chr6:52240000-52239752 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 107, 240 | 
| Conread position: | 418-666 | 
| Cow position: | chr6:25773933-25773688 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 6.99949e-42 | 
| Alignm gaps (pig, cow): | 244, 61 | 
| Conread position: | 418-754 | 
| Cow position: | chr6:14306631-14306969 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 108, 9 | 
| Conread position: | 418-759 | 
| Cow position: | chr6:27852165-27851822 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 115, 50 | 
| Conread position: | 418-806 | 
| Cow position: | chr6:6340695-6341082 (view UCSC Genome Browser custom track) | 
| Alignm length: | 398 | 
| Alignm identity: | 265 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 123, 204 | 
| Conread position: | 418-837 | 
| Cow position: | chr6:28558978-28559381 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 240, 151 | 
| Conread position: | 418-860 | 
| Cow position: | chr6:64431489-64431915 (view UCSC Genome Browser custom track) | 
| Alignm length: | 444 | 
| Alignm identity: | 330 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 242, 13 | 
| Conread position: | 418-869 | 
| Cow position: | chr6:42565228-42565681 (view UCSC Genome Browser custom track) | 
| Alignm length: | 459 | 
| Alignm identity: | 342 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 41, 51 | 
| Conread position: | 419-538 | 
| Cow position: | chr6:22332804-22332685 (view UCSC Genome Browser custom track) | 
| Alignm length: | 120 | 
| Alignm identity: | 95 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 419-578 | 
| Cow position: | chr6:54293677-54293842 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 109, 0 | 
| Conread position: | 419-609 | 
| Cow position: | chr6:65898478-65898289 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 108, 0 | 
| Conread position: | 419-613 | 
| Cow position: | chr6:2582302-2582502 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 45, 0 | 
| Conread position: | 419-634 | 
| Cow position: | chr6:7824155-7824374 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 101, 76 | 
| Conread position: | 419-646 | 
| Cow position: | chr6:58880863-58881091 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 116, 67 | 
| Conread position: | 419-648 | 
| Cow position: | chr6:5122813-5122581 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 104, 31 | 
| Conread position: | 419-648 | 
| Cow position: | chr6:38440505-38440740 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 109, 0 | 
| Conread position: | 419-654 | 
| Cow position: | chr6:21541616-21541856 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 113, 0 | 
| Conread position: | 419-658 | 
| Cow position: | chr6:610949-611193 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 111, 42 | 
| Conread position: | 419-660 | 
| Cow position: | chr6:41707154-41707398 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 4e-28 | 
| Alignm gaps (pig, cow): | 101, 122 | 
| Conread position: | 419-664 | 
| Cow position: | chr6:42742293-42742531 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 4e-37 | 
| Alignm gaps (pig, cow): | 31, 64 | 
| Conread position: | 419-670 | 
| Cow position: | chr6:16276423-16276681 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 108, 0 | 
| Conread position: | 419-672 | 
| Cow position: | chr6:44598359-44598105 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 128, 118 | 
| Conread position: | 419-682 | 
| Cow position: | chr6:46283414-46283150 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 5.99994e-41 | 
| Alignm gaps (pig, cow): | 231, 63 | 
| Conread position: | 419-692 | 
| Cow position: | chr6:18955491-18955217 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 231, 263 | 
| Conread position: | 419-693 | 
| Cow position: | chr6:40238540-40238261 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 56, 0 | 
| Conread position: | 419-694 | 
| Cow position: | chr6:1733975-1733696 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 106, 0 | 
| Conread position: | 419-717 | 
| Cow position: | chr6:18905030-18904732 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 69, 109 | 
| Conread position: | 419-732 | 
| Cow position: | chr6:59507883-59508206 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 116, 267 | 
| Conread position: | 419-737 | 
| Cow position: | chr6:32287162-32287480 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 103, 84 | 
| Conread position: | 419-745 | 
| Cow position: | chr6:36826299-36826630 (view UCSC Genome Browser custom track) | 
| Alignm length: | 338 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 69, 35 | 
| Conread position: | 419-764 | 
| Cow position: | chr6:6998940-6999283 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 104, 23 | 
| Conread position: | 419-765 | 
| Cow position: | chr6:42106503-42106164 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 242, 43 | 
| Conread position: | 419-772 | 
| Cow position: | chr6:64815487-64815116 (view UCSC Genome Browser custom track) | 
| Alignm length: | 373 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 110, 364 | 
| Conread position: | 419-773 | 
| Cow position: | chr6:366758-367113 (view UCSC Genome Browser custom track) | 
| Alignm length: | 356 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 242, 0 | 
| Conread position: | 419-816 | 
| Cow position: | chr6:35121713-35121336 (view UCSC Genome Browser custom track) | 
| Alignm length: | 407 | 
| Alignm identity: | 274 | 
| Alignm E-value: | 7e-32 | 
| Alignm gaps (pig, cow): | 56, 209 | 
| Conread position: | 419-820 | 
| Cow position: | chr6:55660191-55659773 (view UCSC Genome Browser custom track) | 
| Alignm length: | 429 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 108, 59 | 
| Conread position: | 419-821 | 
| Cow position: | chr6:8210039-8209650 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 289 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 242, 89 | 
| Conread position: | 419-830 | 
| Cow position: | chr6:19570239-19569832 (view UCSC Genome Browser custom track) | 
| Alignm length: | 414 | 
| Alignm identity: | 298 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 282, 118 | 
| Conread position: | 419-847 | 
| Cow position: | chr6:49411134-49410725 (view UCSC Genome Browser custom track) | 
| Alignm length: | 435 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 235, 54 | 
| Conread position: | 419-854 | 
| Cow position: | chr6:12550810-12551242 (view UCSC Genome Browser custom track) | 
| Alignm length: | 438 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 242, 262 | 
| Conread position: | 419-854 | 
| Cow position: | chr6:13688269-13687839 (view UCSC Genome Browser custom track) | 
| Alignm length: | 446 | 
| Alignm identity: | 324 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 123, 63 | 
| Conread position: | 419-854 | 
| Cow position: | chr6:16593637-16594056 (view UCSC Genome Browser custom track) | 
| Alignm length: | 438 | 
| Alignm identity: | 304 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 384, 54 | 
| Conread position: | 419-854 | 
| Cow position: | chr6:52478901-52478440 (view UCSC Genome Browser custom track) | 
| Alignm length: | 464 | 
| Alignm identity: | 340 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 54, 278 | 
| Conread position: | 419-854 | 
| Cow position: | chr6:64720839-64721267 (view UCSC Genome Browser custom track) | 
| Alignm length: | 442 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 242, 119 | 
| Conread position: | 419-856 | 
| Cow position: | chr6:12623013-12623446 (view UCSC Genome Browser custom track) | 
| Alignm length: | 440 | 
| Alignm identity: | 319 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 243, 280 | 
| Conread position: | 419-860 | 
| Cow position: | chr6:16410746-16411171 (view UCSC Genome Browser custom track) | 
| Alignm length: | 445 | 
| Alignm identity: | 337 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 242, 63 | 
| Conread position: | 419-860 | 
| Cow position: | chr6:28147798-28148232 (view UCSC Genome Browser custom track) | 
| Alignm length: | 444 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 267, 159 | 
| Conread position: | 419-863 | 
| Cow position: | chr6:2012565-2013001 (view UCSC Genome Browser custom track) | 
| Alignm length: | 448 | 
| Alignm identity: | 330 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 132, 90 | 
| Conread position: | 420-649 | 
| Cow position: | chr6:60485231-60485449 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 8e-33 | 
| Alignm gaps (pig, cow): | 162, 112 | 
| Conread position: | 422-754 | 
| Cow position: | chr6:47942990-47943321 (view UCSC Genome Browser custom track) | 
| Alignm length: | 339 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 110, 9 | 
| Conread position: | 422-860 | 
| Cow position: | chr6:48169490-48169925 (view UCSC Genome Browser custom track) | 
| Alignm length: | 441 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 239, 320 | 
| Conread position: | 423-754 | 
| Cow position: | chr6:62211292-62211630 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 103, 43 | 
| Conread position: | 423-850 | 
| Cow position: | chr6:60931356-60930928 (view UCSC Genome Browser custom track) | 
| Alignm length: | 442 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 118, 82 | 
| Conread position: | 424-678 | 
| Cow position: | chr6:46246548-46246304 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 237, 171 | 
| Conread position: | 424-733 | 
| Cow position: | chr6:35590650-35590956 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 98, 89 | 
| Conread position: | 424-754 | 
| Cow position: | chr6:61066628-61066964 (view UCSC Genome Browser custom track) | 
| Alignm length: | 339 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 110, 279 | 
| Conread position: | 424-754 | 
| Cow position: | chr6:62828602-62828280 (view UCSC Genome Browser custom track) | 
| Alignm length: | 335 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 99, 34 | 
| Conread position: | 424-756 | 
| Cow position: | chr6:21694258-21694580 (view UCSC Genome Browser custom track) | 
| Alignm length: | 336 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 120, 56 | 
| Conread position: | 424-775 | 
| Cow position: | chr6:222891-222531 (view UCSC Genome Browser custom track) | 
| Alignm length: | 364 | 
| Alignm identity: | 266 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 39 | 
| Conread position: | 424-851 | 
| Cow position: | chr6:24030922-24031351 (view UCSC Genome Browser custom track) | 
| Alignm length: | 431 | 
| Alignm identity: | 308 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 237, 379 | 
| Conread position: | 429-523 | 
| Cow position: | chr6:5610105-5610011 (view UCSC Genome Browser custom track) | 
| Alignm length: | 95 | 
| Alignm identity: | 80 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 429-531 | 
| Cow position: | chr6:25178623-25178518 (view UCSC Genome Browser custom track) | 
| Alignm length: | 106 | 
| Alignm identity: | 88 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 91, 0 | 
| Conread position: | 429-554 | 
| Cow position: | chr6:50446354-50446229 (view UCSC Genome Browser custom track) | 
| Alignm length: | 126 | 
| Alignm identity: | 95 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 429-555 | 
| Cow position: | chr6:10176801-10176676 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 98 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 429-557 | 
| Cow position: | chr6:10487152-10487277 (view UCSC Genome Browser custom track) | 
| Alignm length: | 130 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 98, 39 | 
| Conread position: | 429-560 | 
| Cow position: | chr6:6201031-6201161 (view UCSC Genome Browser custom track) | 
| Alignm length: | 132 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 85, 0 | 
| Conread position: | 429-582 | 
| Cow position: | chr6:45160832-45160680 (view UCSC Genome Browser custom track) | 
| Alignm length: | 154 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 39, 0 | 
| Conread position: | 429-582 | 
| Cow position: | chr6:50637958-50638111 (view UCSC Genome Browser custom track) | 
| Alignm length: | 154 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 429-592 | 
| Cow position: | chr6:38896320-38896157 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 97, 109 | 
| Conread position: | 429-602 | 
| Cow position: | chr6:51385954-51386135 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 91, 0 | 
| Conread position: | 429-606 | 
| Cow position: | chr6:14148286-14148467 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 104, 39 | 
| Conread position: | 429-610 | 
| Cow position: | chr6:53461469-53461291 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 39, 0 | 
| Conread position: | 429-614 | 
| Cow position: | chr6:14289820-14289630 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 108, 39 | 
| Conread position: | 429-618 | 
| Cow position: | chr6:59277650-59277454 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 429-619 | 
| Cow position: | chr6:28107447-28107255 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 101, 16 | 
| Conread position: | 429-626 | 
| Cow position: | chr6:15783293-15783086 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 7e-32 | 
| Alignm gaps (pig, cow): | 64, 0 | 
| Conread position: | 429-634 | 
| Cow position: | chr6:726436-726235 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 47, 0 | 
| Conread position: | 429-638 | 
| Cow position: | chr6:41466587-41466386 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 108, 90 | 
| Conread position: | 429-640 | 
| Cow position: | chr6:50114398-50114609 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 18, 24 | 
| Conread position: | 429-641 | 
| Cow position: | chr6:828132-827917 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 96, 145 | 
| Conread position: | 429-642 | 
| Cow position: | chr6:34476054-34475843 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 1.99993e-41 | 
| Alignm gaps (pig, cow): | 49, 0 | 
| Conread position: | 429-643 | 
| Cow position: | chr6:31979036-31978823 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 95, 44 | 
| Conread position: | 429-643 | 
| Cow position: | chr6:47988613-47988827 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 429-644 | 
| Cow position: | chr6:18142683-18142890 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 39, 0 | 
| Conread position: | 429-645 | 
| Cow position: | chr6:55141132-55140914 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 97, 39 | 
| Conread position: | 429-649 | 
| Cow position: | chr6:49733487-49733707 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 29, 34 | 
| Conread position: | 429-650 | 
| Cow position: | chr6:1077563-1077332 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 22, 0 | 
| Conread position: | 429-650 | 
| Cow position: | chr6:10570206-10569984 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 30, 34 | 
| Conread position: | 429-650 | 
| Cow position: | chr6:47381372-47381597 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 89, 213 | 
| Conread position: | 429-650 | 
| Cow position: | chr6:54865641-54865422 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 44, 0 | 
| Conread position: | 429-651 | 
| Cow position: | chr6:12406913-12407136 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 46, 179 | 
| Conread position: | 429-654 | 
| Cow position: | chr6:42726967-42726738 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 102, 213 | 
| Conread position: | 429-654 | 
| Cow position: | chr6:65871465-65871695 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 96, 39 | 
| Conread position: | 429-656 | 
| Cow position: | chr6:26914651-26914874 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 51, 0 | 
| Conread position: | 429-657 | 
| Cow position: | chr6:50983735-50983963 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 429-657 | 
| Cow position: | chr6:68048803-68049030 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 129, 0 | 
| Conread position: | 429-660 | 
| Cow position: | chr6:529152-528919 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 108, 24 | 
| Conread position: | 429-660 | 
| Cow position: | chr6:12518780-12519016 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 104, 193 | 
| Conread position: | 429-660 | 
| Cow position: | chr6:16298201-16298444 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 8e-34 | 
| Alignm gaps (pig, cow): | 113, 0 | 
| Conread position: | 429-660 | 
| Cow position: | chr6:47640948-47640714 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 136, 55 | 
| Conread position: | 429-660 | 
| Cow position: | chr6:55944741-55944502 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 48, 33 | 
| Conread position: | 429-661 | 
| Cow position: | chr6:2894782-2895012 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 54, 0 | 
| Conread position: | 429-661 | 
| Cow position: | chr6:3375043-3374807 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 109, 64 | 
| Conread position: | 429-661 | 
| Cow position: | chr6:50685272-50685038 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 93, 136 | 
| Conread position: | 429-667 | 
| Cow position: | chr6:47574487-47574727 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 191, 50 | 
| Conread position: | 429-672 | 
| Cow position: | chr6:40157834-40157587 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 96, 121 | 
| Conread position: | 429-674 | 
| Cow position: | chr6:19443152-19443395 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 7e-32 | 
| Alignm gaps (pig, cow): | 103, 146 | 
| Conread position: | 429-674 | 
| Cow position: | chr6:66550261-66550513 (view UCSC Genome Browser custom track) | 
| Alignm length: | 255 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 114, 39 | 
| Conread position: | 429-676 | 
| Cow position: | chr6:42131275-42131016 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 224 | 
| Conread position: | 429-684 | 
| Cow position: | chr6:16251742-16252003 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 7.9874e-44 | 
| Alignm gaps (pig, cow): | 112, 0 | 
| Conread position: | 429-688 | 
| Cow position: | chr6:4903096-4902843 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 44, 116 | 
| Conread position: | 429-693 | 
| Cow position: | chr6:63094359-63094624 (view UCSC Genome Browser custom track) | 
| Alignm length: | 267 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 118, 109 | 
| Conread position: | 429-695 | 
| Cow position: | chr6:28156571-28156298 (view UCSC Genome Browser custom track) | 
| Alignm length: | 274 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 117, 0 | 
| Conread position: | 429-721 | 
| Cow position: | chr6:21590279-21590562 (view UCSC Genome Browser custom track) | 
| Alignm length: | 298 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 44, 144 | 
| Conread position: | 429-721 | 
| Cow position: | chr6:33949463-33949151 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 8e-33 | 
| Alignm gaps (pig, cow): | 101, 78 | 
| Conread position: | 429-724 | 
| Cow position: | chr6:55762942-55763235 (view UCSC Genome Browser custom track) | 
| Alignm length: | 297 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 233, 270 | 
| Conread position: | 429-725 | 
| Cow position: | chr6:119517-119827 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 63, 50 | 
| Conread position: | 429-726 | 
| Cow position: | chr6:58370119-58370427 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 96, 136 | 
| Conread position: | 429-741 | 
| Cow position: | chr6:66751438-66751749 (view UCSC Genome Browser custom track) | 
| Alignm length: | 325 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 220, 39 | 
| Conread position: | 429-746 | 
| Cow position: | chr6:39301270-39300951 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 51, 96 | 
| Conread position: | 429-750 | 
| Cow position: | chr6:11192886-11192578 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 232, 39 | 
| Conread position: | 429-754 | 
| Cow position: | chr6:4824513-4824841 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 96, 240 | 
| Conread position: | 429-754 | 
| Cow position: | chr6:22216029-22215717 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 146, 99 | 
| Conread position: | 429-754 | 
| Cow position: | chr6:35274921-35274589 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 29, 45 | 
| Conread position: | 429-758 | 
| Cow position: | chr6:9375809-9375492 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 233, 58 | 
| Conread position: | 429-758 | 
| Cow position: | chr6:40497124-40497459 (view UCSC Genome Browser custom track) | 
| Alignm length: | 339 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 86, 39 | 
| Conread position: | 429-758 | 
| Cow position: | chr6:63923540-63923852 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 233, 39 | 
| Conread position: | 429-762 | 
| Cow position: | chr6:19328289-19327964 (view UCSC Genome Browser custom track) | 
| Alignm length: | 343 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 8e-34 | 
| Alignm gaps (pig, cow): | 101, 186 | 
| Conread position: | 429-762 | 
| Cow position: | chr6:25783858-25784198 (view UCSC Genome Browser custom track) | 
| Alignm length: | 342 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 275 | 
| Conread position: | 429-762 | 
| Cow position: | chr6:33509137-33509467 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 235, 23 | 
| Conread position: | 429-762 | 
| Cow position: | chr6:56501865-56502195 (view UCSC Genome Browser custom track) | 
| Alignm length: | 335 | 
| Alignm identity: | 254 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 213, 43 | 
| Conread position: | 429-770 | 
| Cow position: | chr6:61443558-61443209 (view UCSC Genome Browser custom track) | 
| Alignm length: | 353 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 102, 218 | 
| Conread position: | 429-771 | 
| Cow position: | chr6:4155993-4155642 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 103, 185 | 
| Conread position: | 429-773 | 
| Cow position: | chr6:39137193-39137531 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 7.9874e-44 | 
| Alignm gaps (pig, cow): | 232, 73 | 
| Conread position: | 429-787 | 
| Cow position: | chr6:60516282-60516642 (view UCSC Genome Browser custom track) | 
| Alignm length: | 363 | 
| Alignm identity: | 273 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 229, 100 | 
| Conread position: | 429-801 | 
| Cow position: | chr6:38988123-38987754 (view UCSC Genome Browser custom track) | 
| Alignm length: | 375 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 94, 233 | 
| Conread position: | 429-804 | 
| Cow position: | chr6:18977163-18977551 (view UCSC Genome Browser custom track) | 
| Alignm length: | 395 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 28, 83 | 
| Conread position: | 429-805 | 
| Cow position: | chr6:52627162-52627534 (view UCSC Genome Browser custom track) | 
| Alignm length: | 383 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 101, 237 | 
| Conread position: | 429-805 | 
| Cow position: | chr6:54433463-54433081 (view UCSC Genome Browser custom track) | 
| Alignm length: | 392 | 
| Alignm identity: | 261 | 
| Alignm E-value: | 8e-33 | 
| Alignm gaps (pig, cow): | 96, 63 | 
| Conread position: | 429-806 | 
| Cow position: | chr6:643041-642647 (view UCSC Genome Browser custom track) | 
| Alignm length: | 395 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 158, 0 | 
| Conread position: | 429-807 | 
| Cow position: | chr6:6166951-6167324 (view UCSC Genome Browser custom track) | 
| Alignm length: | 386 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 101, 38 | 
| Conread position: | 429-807 | 
| Cow position: | chr6:10695412-10695798 (view UCSC Genome Browser custom track) | 
| Alignm length: | 390 | 
| Alignm identity: | 283 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 210, 139 | 
| Conread position: | 429-807 | 
| Cow position: | chr6:14064105-14063734 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 289 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 233, 44 | 
| Conread position: | 429-807 | 
| Cow position: | chr6:32262439-32262063 (view UCSC Genome Browser custom track) | 
| Alignm length: | 396 | 
| Alignm identity: | 271 | 
| Alignm E-value: | 7e-32 | 
| Alignm gaps (pig, cow): | 106, 56 | 
| Conread position: | 429-807 | 
| Cow position: | chr6:48946818-48946444 (view UCSC Genome Browser custom track) | 
| Alignm length: | 388 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 106, 190 | 
| Conread position: | 429-807 | 
| Cow position: | chr6:52001927-52002295 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 266 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 232, 91 | 
| Conread position: | 429-807 | 
| Cow position: | chr6:57303289-57303669 (view UCSC Genome Browser custom track) | 
| Alignm length: | 387 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 4e-38 | 
| Alignm gaps (pig, cow): | 113, 27 | 
| Conread position: | 429-808 | 
| Cow position: | chr6:2088210-2088590 (view UCSC Genome Browser custom track) | 
| Alignm length: | 386 | 
| Alignm identity: | 263 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 46, 297 | 
| Conread position: | 429-808 | 
| Cow position: | chr6:5501244-5500860 (view UCSC Genome Browser custom track) | 
| Alignm length: | 389 | 
| Alignm identity: | 271 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 135 | 
| Conread position: | 429-808 | 
| Cow position: | chr6:6596137-6596504 (view UCSC Genome Browser custom track) | 
| Alignm length: | 389 | 
| Alignm identity: | 268 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 44, 183 | 
| Conread position: | 429-808 | 
| Cow position: | chr6:13741250-13741623 (view UCSC Genome Browser custom track) | 
| Alignm length: | 381 | 
| Alignm identity: | 298 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 225, 202 | 
| Conread position: | 429-808 | 
| Cow position: | chr6:36918620-36918247 (view UCSC Genome Browser custom track) | 
| Alignm length: | 387 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 108, 172 | 
| Conread position: | 429-808 | 
| Cow position: | chr6:55842620-55842231 (view UCSC Genome Browser custom track) | 
| Alignm length: | 393 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 4e-37 | 
| Alignm gaps (pig, cow): | 89, 265 | 
| Conread position: | 429-808 | 
| Cow position: | chr6:60891097-60890711 (view UCSC Genome Browser custom track) | 
| Alignm length: | 392 | 
| Alignm identity: | 261 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 96, 146 | 
| Conread position: | 429-811 | 
| Cow position: | chr6:22877598-22877230 (view UCSC Genome Browser custom track) | 
| Alignm length: | 383 | 
| Alignm identity: | 288 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 0 | 
| Conread position: | 429-811 | 
| Cow position: | chr6:60673102-60673477 (view UCSC Genome Browser custom track) | 
| Alignm length: | 384 | 
| Alignm identity: | 276 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 233, 63 | 
| Conread position: | 429-813 | 
| Cow position: | chr6:35613858-35613482 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 281 | 
| Alignm E-value: | 8e-34 | 
| Alignm gaps (pig, cow): | 222, 70 | 
| Conread position: | 429-820 | 
| Cow position: | chr6:1914182-1914561 (view UCSC Genome Browser custom track) | 
| Alignm length: | 393 | 
| Alignm identity: | 263 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 220, 108 | 
| Conread position: | 429-821 | 
| Cow position: | chr6:11160480-11160065 (view UCSC Genome Browser custom track) | 
| Alignm length: | 418 | 
| Alignm identity: | 283 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 74, 180 | 
| Conread position: | 429-821 | 
| Cow position: | chr6:29077280-29077670 (view UCSC Genome Browser custom track) | 
| Alignm length: | 400 | 
| Alignm identity: | 286 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 103, 49 | 
| Conread position: | 429-837 | 
| Cow position: | chr6:5958459-5958063 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 25 | 
| Conread position: | 429-837 | 
| Cow position: | chr6:17556931-17557339 (view UCSC Genome Browser custom track) | 
| Alignm length: | 415 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 232, 57 | 
| Conread position: | 429-838 | 
| Cow position: | chr6:7801808-7801409 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 233, 39 | 
| Conread position: | 429-838 | 
| Cow position: | chr6:48567793-48567383 (view UCSC Genome Browser custom track) | 
| Alignm length: | 417 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 130, 331 | 
| Conread position: | 429-840 | 
| Cow position: | chr6:60781906-60781483 (view UCSC Genome Browser custom track) | 
| Alignm length: | 429 | 
| Alignm identity: | 285 | 
| Alignm E-value: | 6.99949e-42 | 
| Alignm gaps (pig, cow): | 97, 11 | 
| Conread position: | 429-849 | 
| Cow position: | chr6:18447961-18447540 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 132, 258 | 
| Conread position: | 429-851 | 
| Cow position: | chr6:1891307-1890873 (view UCSC Genome Browser custom track) | 
| Alignm length: | 445 | 
| Alignm identity: | 288 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 95, 47 | 
| Conread position: | 429-851 | 
| Cow position: | chr6:18987774-18988184 (view UCSC Genome Browser custom track) | 
| Alignm length: | 425 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 232, 49 | 
| Conread position: | 429-852 | 
| Cow position: | chr6:1770641-1770226 (view UCSC Genome Browser custom track) | 
| Alignm length: | 426 | 
| Alignm identity: | 322 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 233, 21 | 
| Conread position: | 429-852 | 
| Cow position: | chr6:10605236-10605660 (view UCSC Genome Browser custom track) | 
| Alignm length: | 429 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 120, 111 | 
| Conread position: | 429-852 | 
| Cow position: | chr6:46666659-46667084 (view UCSC Genome Browser custom track) | 
| Alignm length: | 431 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 208, 146 | 
| Conread position: | 429-853 | 
| Cow position: | chr6:18961968-18961543 (view UCSC Genome Browser custom track) | 
| Alignm length: | 431 | 
| Alignm identity: | 304 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 233, 180 | 
| Conread position: | 429-854 | 
| Cow position: | chr6:1887095-1886690 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 313 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 379, 223 | 
| Conread position: | 429-854 | 
| Cow position: | chr6:8636828-8637249 (view UCSC Genome Browser custom track) | 
| Alignm length: | 429 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 224, 111 | 
| Conread position: | 429-854 | 
| Cow position: | chr6:37634349-37634758 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 232, 39 | 
| Conread position: | 429-857 | 
| Cow position: | chr6:13366851-13367267 (view UCSC Genome Browser custom track) | 
| Alignm length: | 432 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 140, 85 | 
| Conread position: | 429-858 | 
| Cow position: | chr6:606815-607245 (view UCSC Genome Browser custom track) | 
| Alignm length: | 433 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 233, 95 | 
| Conread position: | 429-858 | 
| Cow position: | chr6:5095998-5095569 (view UCSC Genome Browser custom track) | 
| Alignm length: | 438 | 
| Alignm identity: | 317 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 221, 124 | 
| Conread position: | 429-858 | 
| Cow position: | chr6:32121448-32121889 (view UCSC Genome Browser custom track) | 
| Alignm length: | 447 | 
| Alignm identity: | 322 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 52, 339 | 
| Conread position: | 429-859 | 
| Cow position: | chr6:36471015-36470587 (view UCSC Genome Browser custom track) | 
| Alignm length: | 440 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 43, 20 | 
| Conread position: | 429-860 | 
| Cow position: | chr6:16417989-16417558 (view UCSC Genome Browser custom track) | 
| Alignm length: | 436 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 232, 263 | 
| Conread position: | 429-860 | 
| Cow position: | chr6:16737573-16738000 (view UCSC Genome Browser custom track) | 
| Alignm length: | 433 | 
| Alignm identity: | 313 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 232, 252 | 
| Conread position: | 429-860 | 
| Cow position: | chr6:23695550-23695974 (view UCSC Genome Browser custom track) | 
| Alignm length: | 434 | 
| Alignm identity: | 327 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 232, 252 | 
| Conread position: | 429-860 | 
| Cow position: | chr6:34075578-34076007 (view UCSC Genome Browser custom track) | 
| Alignm length: | 444 | 
| Alignm identity: | 322 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 119, 209 | 
| Conread position: | 429-860 | 
| Cow position: | chr6:47339811-47339377 (view UCSC Genome Browser custom track) | 
| Alignm length: | 448 | 
| Alignm identity: | 317 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 104, 340 | 
| Conread position: | 429-860 | 
| Cow position: | chr6:53345349-53345777 (view UCSC Genome Browser custom track) | 
| Alignm length: | 435 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 233, 51 | 
| Conread position: | 429-860 | 
| Cow position: | chr6:56441378-56440945 (view UCSC Genome Browser custom track) | 
| Alignm length: | 436 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 118, 108 | 
| Conread position: | 429-860 | 
| Cow position: | chr6:61575145-61575589 (view UCSC Genome Browser custom track) | 
| Alignm length: | 447 | 
| Alignm identity: | 320 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 39 | 
| Conread position: | 429-861 | 
| Cow position: | chr6:65711379-65711804 (view UCSC Genome Browser custom track) | 
| Alignm length: | 434 | 
| Alignm identity: | 327 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 232, 353 | 
| Conread position: | 429-862 | 
| Cow position: | chr6:10332556-10332109 (view UCSC Genome Browser custom track) | 
| Alignm length: | 450 | 
| Alignm identity: | 337 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 120, 373 | 
| Conread position: | 429-862 | 
| Cow position: | chr6:25358629-25359055 (view UCSC Genome Browser custom track) | 
| Alignm length: | 436 | 
| Alignm identity: | 325 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 232, 261 | 
| Conread position: | 429-863 | 
| Cow position: | chr6:53178189-53178622 (view UCSC Genome Browser custom track) | 
| Alignm length: | 441 | 
| Alignm identity: | 319 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 38, 255 | 
| Conread position: | 429-864 | 
| Cow position: | chr6:14696819-14696384 (view UCSC Genome Browser custom track) | 
| Alignm length: | 443 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 184, 109 | 
| Conread position: | 429-869 | 
| Cow position: | chr6:53933295-53932855 (view UCSC Genome Browser custom track) | 
| Alignm length: | 455 | 
| Alignm identity: | 321 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 181, 50 | 
| Conread position: | 429-869 | 
| Cow position: | chr6:58073589-58074039 (view UCSC Genome Browser custom track) | 
| Alignm length: | 454 | 
| Alignm identity: | 322 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 106, 241 | 
| Conread position: | 429-871 | 
| Cow position: | chr6:57308923-57309370 (view UCSC Genome Browser custom track) | 
| Alignm length: | 450 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 115, 108 | 
| Conread position: | 430-606 | 
| Cow position: | chr6:55289467-55289291 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 5e-40 | 
| Alignm gaps (pig, cow): | 117, 107 | 
| Conread position: | 430-634 | 
| Cow position: | chr6:61842511-61842732 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 21, 0 | 
| Conread position: | 430-640 | 
| Cow position: | chr6:1096034-1095812 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 44, 0 | 
| Conread position: | 430-649 | 
| Cow position: | chr6:30315573-30315351 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 93, 211 | 
| Conread position: | 430-665 | 
| Cow position: | chr6:28503890-28504130 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 6.99949e-42 | 
| Alignm gaps (pig, cow): | 99, 167 | 
| Conread position: | 430-672 | 
| Cow position: | chr6:21396515-21396276 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 231, 180 | 
| Conread position: | 430-683 | 
| Cow position: | chr6:11388911-11388665 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 107, 0 | 
| Conread position: | 430-685 | 
| Cow position: | chr6:54979212-54979468 (view UCSC Genome Browser custom track) | 
| Alignm length: | 258 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 117, 107 | 
| Conread position: | 430-743 | 
| Cow position: | chr6:12977369-12977682 (view UCSC Genome Browser custom track) | 
| Alignm length: | 320 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 100, 36 | 
| Conread position: | 430-758 | 
| Cow position: | chr6:17693107-17692779 (view UCSC Genome Browser custom track) | 
| Alignm length: | 335 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 99, 38 | 
| Conread position: | 430-799 | 
| Cow position: | chr6:2668755-2668384 (view UCSC Genome Browser custom track) | 
| Alignm length: | 374 | 
| Alignm identity: | 275 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 117, 107 | 
| Conread position: | 430-799 | 
| Cow position: | chr6:6471217-6470852 (view UCSC Genome Browser custom track) | 
| Alignm length: | 373 | 
| Alignm identity: | 273 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 232, 127 | 
| Conread position: | 430-807 | 
| Cow position: | chr6:41152217-41152577 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 220, 38 | 
| Conread position: | 430-808 | 
| Cow position: | chr6:64426741-64427118 (view UCSC Genome Browser custom track) | 
| Alignm length: | 384 | 
| Alignm identity: | 262 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 110, 122 | 
| Conread position: | 430-853 | 
| Cow position: | chr6:6721675-6722074 (view UCSC Genome Browser custom track) | 
| Alignm length: | 426 | 
| Alignm identity: | 282 | 
| Alignm E-value: | 9e-35 | 
| Alignm gaps (pig, cow): | 111, 121 | 
| Conread position: | 430-854 | 
| Cow position: | chr6:32211072-32210654 (view UCSC Genome Browser custom track) | 
| Alignm length: | 430 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 184, 61 | 
| Conread position: | 430-860 | 
| Cow position: | chr6:9733278-9732863 (view UCSC Genome Browser custom track) | 
| Alignm length: | 435 | 
| Alignm identity: | 313 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 128, 177 | 
| Conread position: | 430-860 | 
| Cow position: | chr6:10612410-10612833 (view UCSC Genome Browser custom track) | 
| Alignm length: | 443 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 112, 200 | 
| Conread position: | 430-860 | 
| Cow position: | chr6:56080214-56079784 (view UCSC Genome Browser custom track) | 
| Alignm length: | 434 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 117, 107 | 
| Conread position: | 431-567 | 
| Cow position: | chr6:37611677-37611818 (view UCSC Genome Browser custom track) | 
| Alignm length: | 143 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 104, 33 | 
| Conread position: | 431-590 | 
| Cow position: | chr6:2833508-2833357 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 37, 0 | 
| Conread position: | 431-610 | 
| Cow position: | chr6:41677661-41677848 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 98, 0 | 
| Conread position: | 431-634 | 
| Cow position: | chr6:23248554-23248349 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 43, 0 | 
| Conread position: | 431-648 | 
| Cow position: | chr6:52401346-52401564 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 100, 17 | 
| Conread position: | 431-649 | 
| Cow position: | chr6:1510126-1510348 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 4e-28 | 
| Alignm gaps (pig, cow): | 97, 65 | 
| Conread position: | 431-654 | 
| Cow position: | chr6:16103696-16103471 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 0 | 
| Conread position: | 431-654 | 
| Cow position: | chr6:22017476-22017251 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 100, 69 | 
| Conread position: | 431-654 | 
| Cow position: | chr6:44869599-44869376 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 123, 83 | 
| Conread position: | 431-660 | 
| Cow position: | chr6:3118686-3118452 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 42, 170 | 
| Conread position: | 431-661 | 
| Cow position: | chr6:29084696-29084459 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 88, 0 | 
| Conread position: | 431-688 | 
| Cow position: | chr6:52189296-52189034 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 93, 176 | 
| Conread position: | 431-745 | 
| Cow position: | chr6:44510797-44511109 (view UCSC Genome Browser custom track) | 
| Alignm length: | 321 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 7e-32 | 
| Alignm gaps (pig, cow): | 231, 18 | 
| Conread position: | 431-754 | 
| Cow position: | chr6:181838-181515 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 230, 177 | 
| Conread position: | 431-758 | 
| Cow position: | chr6:65891380-65891053 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 5e-40 | 
| Alignm gaps (pig, cow): | 126, 262 | 
| Conread position: | 431-766 | 
| Cow position: | chr6:23401421-23401095 (view UCSC Genome Browser custom track) | 
| Alignm length: | 339 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 122, 33 | 
| Conread position: | 431-766 | 
| Cow position: | chr6:33470815-33471157 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 28, 250 | 
| Conread position: | 431-767 | 
| Cow position: | chr6:50800863-50800512 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 5.99994e-41 | 
| Alignm gaps (pig, cow): | 104, 188 | 
| Conread position: | 431-772 | 
| Cow position: | chr6:47773669-47773316 (view UCSC Genome Browser custom track) | 
| Alignm length: | 356 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 103, 246 | 
| Conread position: | 431-805 | 
| Cow position: | chr6:8145328-8144939 (view UCSC Genome Browser custom track) | 
| Alignm length: | 396 | 
| Alignm identity: | 266 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 106, 183 | 
| Conread position: | 431-805 | 
| Cow position: | chr6:11704747-11705124 (view UCSC Genome Browser custom track) | 
| Alignm length: | 382 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 7.9874e-44 | 
| Alignm gaps (pig, cow): | 96, 21 | 
| Conread position: | 431-805 | 
| Cow position: | chr6:41215944-41216323 (view UCSC Genome Browser custom track) | 
| Alignm length: | 381 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 92, 275 | 
| Conread position: | 431-806 | 
| Cow position: | chr6:54357827-54357448 (view UCSC Genome Browser custom track) | 
| Alignm length: | 388 | 
| Alignm identity: | 275 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 87, 94 | 
| Conread position: | 431-807 | 
| Cow position: | chr6:6187819-6188179 (view UCSC Genome Browser custom track) | 
| Alignm length: | 378 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 42, 99 | 
| Conread position: | 431-808 | 
| Cow position: | chr6:31953127-31952744 (view UCSC Genome Browser custom track) | 
| Alignm length: | 391 | 
| Alignm identity: | 262 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 81, 30 | 
| Conread position: | 431-810 | 
| Cow position: | chr6:20552549-20552169 (view UCSC Genome Browser custom track) | 
| Alignm length: | 383 | 
| Alignm identity: | 274 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 230, 327 | 
| Conread position: | 431-810 | 
| Cow position: | chr6:25218484-25218863 (view UCSC Genome Browser custom track) | 
| Alignm length: | 382 | 
| Alignm identity: | 268 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 230, 37 | 
| Conread position: | 431-810 | 
| Cow position: | chr6:33865538-33865162 (view UCSC Genome Browser custom track) | 
| Alignm length: | 383 | 
| Alignm identity: | 271 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 47, 252 | 
| Conread position: | 431-823 | 
| Cow position: | chr6:58594562-58594162 (view UCSC Genome Browser custom track) | 
| Alignm length: | 409 | 
| Alignm identity: | 282 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 36, 24 | 
| Conread position: | 431-832 | 
| Cow position: | chr6:3719538-3719942 (view UCSC Genome Browser custom track) | 
| Alignm length: | 408 | 
| Alignm identity: | 282 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 230, 261 | 
| Conread position: | 431-836 | 
| Cow position: | chr6:51877458-51877865 (view UCSC Genome Browser custom track) | 
| Alignm length: | 419 | 
| Alignm identity: | 283 | 
| Alignm E-value: | 7.9874e-44 | 
| Alignm gaps (pig, cow): | 42, 121 | 
| Conread position: | 431-853 | 
| Cow position: | chr6:46570680-46571090 (view UCSC Genome Browser custom track) | 
| Alignm length: | 425 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 230, 128 | 
| Conread position: | 431-854 | 
| Cow position: | chr6:36651978-36652393 (view UCSC Genome Browser custom track) | 
| Alignm length: | 432 | 
| Alignm identity: | 296 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 102, 188 | 
| Conread position: | 431-860 | 
| Cow position: | chr6:28811447-28811015 (view UCSC Genome Browser custom track) | 
| Alignm length: | 440 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 28, 32 | 
| Conread position: | 431-861 | 
| Cow position: | chr6:28476721-28477159 (view UCSC Genome Browser custom track) | 
| Alignm length: | 449 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 110 | 
| Conread position: | 432-729 | 
| Cow position: | chr6:24044849-24044548 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 95, 64 | 
| Conread position: | 433-662 | 
| Cow position: | chr6:17344901-17345132 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 169, 106 | 
| Conread position: | 433-854 | 
| Cow position: | chr6:706700-707123 (view UCSC Genome Browser custom track) | 
| Alignm length: | 425 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 228, 387 | 
| Conread position: | 433-854 | 
| Cow position: | chr6:58747767-58748189 (view UCSC Genome Browser custom track) | 
| Alignm length: | 426 | 
| Alignm identity: | 313 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 228, 178 | 
| Conread position: | 434-557 | 
| Cow position: | chr6:8442850-8442727 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 113, 103 | 
| Conread position: | 434-653 | 
| Cow position: | chr6:23532153-23532378 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 46, 0 | 
| Conread position: | 434-660 | 
| Cow position: | chr6:45793359-45793586 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 7e-32 | 
| Alignm gaps (pig, cow): | 107, 34 | 
| Conread position: | 434-660 | 
| Cow position: | chr6:52697323-52697549 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 434-661 | 
| Cow position: | chr6:55143567-55143340 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 434-668 | 
| Cow position: | chr6:479253-479488 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 227, 0 | 
| Conread position: | 434-668 | 
| Cow position: | chr6:539842-540071 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 7.00649e-43 | 
| Alignm gaps (pig, cow): | 26, 110 | 
| Conread position: | 434-688 | 
| Cow position: | chr6:51468020-51468272 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 15, 205 | 
| Conread position: | 434-727 | 
| Cow position: | chr6:19712538-19712249 (view UCSC Genome Browser custom track) | 
| Alignm length: | 295 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 227, 103 | 
| Conread position: | 434-732 | 
| Cow position: | chr6:33451528-33451822 (view UCSC Genome Browser custom track) | 
| Alignm length: | 301 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 152, 128 | 
| Conread position: | 434-754 | 
| Cow position: | chr6:16430861-16430544 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 105, 38 | 
| Conread position: | 434-759 | 
| Cow position: | chr6:39093323-39093627 (view UCSC Genome Browser custom track) | 
| Alignm length: | 329 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 41 | 
| Conread position: | 434-762 | 
| Cow position: | chr6:46681366-46681694 (view UCSC Genome Browser custom track) | 
| Alignm length: | 330 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 217, 227 | 
| Conread position: | 434-831 | 
| Cow position: | chr6:54218225-54218627 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 289 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 82, 251 | 
| Conread position: | 434-836 | 
| Cow position: | chr6:2089965-2090369 (view UCSC Genome Browser custom track) | 
| Alignm length: | 407 | 
| Alignm identity: | 294 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 110, 103 | 
| Conread position: | 434-836 | 
| Cow position: | chr6:22628021-22627617 (view UCSC Genome Browser custom track) | 
| Alignm length: | 407 | 
| Alignm identity: | 290 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 113, 103 | 
| Conread position: | 434-836 | 
| Cow position: | chr6:48422108-48421701 (view UCSC Genome Browser custom track) | 
| Alignm length: | 413 | 
| Alignm identity: | 292 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 104, 265 | 
| Conread position: | 434-853 | 
| Cow position: | chr6:17111459-17111040 (view UCSC Genome Browser custom track) | 
| Alignm length: | 424 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 214, 194 | 
| Conread position: | 434-853 | 
| Cow position: | chr6:17122096-17122512 (view UCSC Genome Browser custom track) | 
| Alignm length: | 424 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 214, 194 | 
| Conread position: | 434-854 | 
| Cow position: | chr6:14839468-14839050 (view UCSC Genome Browser custom track) | 
| Alignm length: | 425 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 87, 104 | 
| Conread position: | 434-860 | 
| Cow position: | chr6:17414896-17414469 (view UCSC Genome Browser custom track) | 
| Alignm length: | 431 | 
| Alignm identity: | 313 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 227, 308 | 
| Conread position: | 434-860 | 
| Cow position: | chr6:31636141-31635712 (view UCSC Genome Browser custom track) | 
| Alignm length: | 443 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 14, 259 | 
| Conread position: | 434-860 | 
| Cow position: | chr6:32916361-32915944 (view UCSC Genome Browser custom track) | 
| Alignm length: | 429 | 
| Alignm identity: | 319 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 227, 30 | 
| Conread position: | 435-644 | 
| Cow position: | chr6:6038551-6038337 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 105, 33 | 
| Conread position: | 435-742 | 
| Cow position: | chr6:5866835-5866513 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 82, 0 | 
| Conread position: | 436-535 | 
| Cow position: | chr6:34386839-34386938 (view UCSC Genome Browser custom track) | 
| Alignm length: | 100 | 
| Alignm identity: | 82 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 436-545 | 
| Cow position: | chr6:15987139-15987246 (view UCSC Genome Browser custom track) | 
| Alignm length: | 110 | 
| Alignm identity: | 90 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 87, 0 | 
| Conread position: | 436-552 | 
| Cow position: | chr6:41567393-41567507 (view UCSC Genome Browser custom track) | 
| Alignm length: | 117 | 
| Alignm identity: | 94 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 101, 0 | 
| Conread position: | 436-556 | 
| Cow position: | chr6:24713665-24713545 (view UCSC Genome Browser custom track) | 
| Alignm length: | 122 | 
| Alignm identity: | 97 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-561 | 
| Cow position: | chr6:22225292-22225166 (view UCSC Genome Browser custom track) | 
| Alignm length: | 128 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 12, 124 | 
| Conread position: | 436-564 | 
| Cow position: | chr6:26324492-26324364 (view UCSC Genome Browser custom track) | 
| Alignm length: | 130 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-565 | 
| Cow position: | chr6:34503816-34503687 (view UCSC Genome Browser custom track) | 
| Alignm length: | 130 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 436-568 | 
| Cow position: | chr6:51544369-51544237 (view UCSC Genome Browser custom track) | 
| Alignm length: | 134 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-577 | 
| Cow position: | chr6:49422189-49422048 (view UCSC Genome Browser custom track) | 
| Alignm length: | 142 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 436-587 | 
| Cow position: | chr6:39897354-39897203 (view UCSC Genome Browser custom track) | 
| Alignm length: | 153 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 7e-32 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-589 | 
| Cow position: | chr6:451555-451402 (view UCSC Genome Browser custom track) | 
| Alignm length: | 155 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 111, 104 | 
| Conread position: | 436-590 | 
| Cow position: | chr6:12389416-12389579 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 44, 0 | 
| Conread position: | 436-595 | 
| Cow position: | chr6:26344402-26344561 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 7e-32 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-596 | 
| Cow position: | chr6:19059982-19060142 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 436-597 | 
| Cow position: | chr6:26697355-26697195 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 144, 0 | 
| Conread position: | 436-598 | 
| Cow position: | chr6:1274149-1273991 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 99, 0 | 
| Conread position: | 436-607 | 
| Cow position: | chr6:41495129-41494958 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-609 | 
| Cow position: | chr6:43086906-43086733 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 37, 68 | 
| Conread position: | 436-610 | 
| Cow position: | chr6:29298925-29299099 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 5e-40 | 
| Alignm gaps (pig, cow): | 110, 101 | 
| Conread position: | 436-610 | 
| Cow position: | chr6:55170179-55170346 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 41, 0 | 
| Conread position: | 436-611 | 
| Cow position: | chr6:55040987-55041162 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 436-612 | 
| Cow position: | chr6:30705084-30705260 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-619 | 
| Cow position: | chr6:51879434-51879625 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 97, 32 | 
| Conread position: | 436-625 | 
| Cow position: | chr6:40760738-40760939 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 51, 0 | 
| Conread position: | 436-628 | 
| Cow position: | chr6:40169469-40169277 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-629 | 
| Cow position: | chr6:18474348-18474155 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-640 | 
| Cow position: | chr6:14949951-14949749 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 4e-38 | 
| Alignm gaps (pig, cow): | 162, 0 | 
| Conread position: | 436-640 | 
| Cow position: | chr6:32335138-32335356 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 69, 0 | 
| Conread position: | 436-641 | 
| Cow position: | chr6:56556903-56556699 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-643 | 
| Cow position: | chr6:62486793-62486581 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 99, 207 | 
| Conread position: | 436-647 | 
| Cow position: | chr6:44131144-44130932 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-649 | 
| Cow position: | chr6:7175565-7175346 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 37, 0 | 
| Conread position: | 436-649 | 
| Cow position: | chr6:55456369-55456148 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 89, 0 | 
| Conread position: | 436-651 | 
| Cow position: | chr6:53918169-53917954 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-652 | 
| Cow position: | chr6:24659391-24659178 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 42, 180 | 
| Conread position: | 436-654 | 
| Cow position: | chr6:7104527-7104310 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 84, 0 | 
| Conread position: | 436-656 | 
| Cow position: | chr6:15182447-15182667 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 7.9874e-44 | 
| Alignm gaps (pig, cow): | 161, 102 | 
| Conread position: | 436-660 | 
| Cow position: | chr6:28136447-28136671 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-660 | 
| Cow position: | chr6:67304340-67304557 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 195, 0 | 
| Conread position: | 436-667 | 
| Cow position: | chr6:1637248-1637015 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 225, 0 | 
| Conread position: | 436-667 | 
| Cow position: | chr6:20515284-20515516 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-669 | 
| Cow position: | chr6:27477561-27477796 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 114, 0 | 
| Conread position: | 436-669 | 
| Cow position: | chr6:28675237-28675472 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-669 | 
| Cow position: | chr6:34494377-34494611 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 224, 0 | 
| Conread position: | 436-669 | 
| Cow position: | chr6:65930929-65931164 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 85 | 
| Conread position: | 436-670 | 
| Cow position: | chr6:34115576-34115810 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 225, 54 | 
| Conread position: | 436-672 | 
| Cow position: | chr6:50571877-50572114 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 225, 0 | 
| Conread position: | 436-687 | 
| Cow position: | chr6:39080626-39080878 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-687 | 
| Cow position: | chr6:45661040-45661294 (view UCSC Genome Browser custom track) | 
| Alignm length: | 258 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 94, 21 | 
| Conread position: | 436-688 | 
| Cow position: | chr6:11185133-11185386 (view UCSC Genome Browser custom track) | 
| Alignm length: | 255 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-688 | 
| Cow position: | chr6:13597460-13597207 (view UCSC Genome Browser custom track) | 
| Alignm length: | 255 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-688 | 
| Cow position: | chr6:14929153-14929405 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-688 | 
| Cow position: | chr6:19707138-19707391 (view UCSC Genome Browser custom track) | 
| Alignm length: | 255 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-688 | 
| Cow position: | chr6:26771413-26771159 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-688 | 
| Cow position: | chr6:45747299-45747045 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 102 | 
| Conread position: | 436-688 | 
| Cow position: | chr6:49444827-49445078 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 225, 245 | 
| Conread position: | 436-688 | 
| Cow position: | chr6:50755582-50755835 (view UCSC Genome Browser custom track) | 
| Alignm length: | 255 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-688 | 
| Cow position: | chr6:59077003-59076749 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-688 | 
| Cow position: | chr6:63714580-63714328 (view UCSC Genome Browser custom track) | 
| Alignm length: | 255 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-689 | 
| Cow position: | chr6:15310304-15310050 (view UCSC Genome Browser custom track) | 
| Alignm length: | 255 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 225, 0 | 
| Conread position: | 436-691 | 
| Cow position: | chr6:8284067-8283812 (view UCSC Genome Browser custom track) | 
| Alignm length: | 258 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 32 | 
| Conread position: | 436-695 | 
| Cow position: | chr6:59296344-59296597 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 225, 101 | 
| Conread position: | 436-696 | 
| Cow position: | chr6:12648084-12648352 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 27, 255 | 
| Conread position: | 436-725 | 
| Cow position: | chr6:21831951-21831660 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 210, 0 | 
| Conread position: | 436-726 | 
| Cow position: | chr6:27887630-27887907 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 8.40779e-45 | 
| Alignm gaps (pig, cow): | 112, 132 | 
| Conread position: | 436-727 | 
| Cow position: | chr6:28322612-28322328 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 225, 87 | 
| Conread position: | 436-737 | 
| Cow position: | chr6:56651960-56651659 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 45, 239 | 
| Conread position: | 436-742 | 
| Cow position: | chr6:42420827-42421127 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 157, 99 | 
| Conread position: | 436-746 | 
| Cow position: | chr6:14932167-14931850 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 5e-40 | 
| Alignm gaps (pig, cow): | 91, 0 | 
| Conread position: | 436-746 | 
| Cow position: | chr6:30892962-30892651 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 103, 199 | 
| Conread position: | 436-746 | 
| Cow position: | chr6:58390315-58390004 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-748 | 
| Cow position: | chr6:3271772-3271457 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 149, 258 | 
| Conread position: | 436-749 | 
| Cow position: | chr6:27240404-27240108 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 107, 100 | 
| Conread position: | 436-751 | 
| Cow position: | chr6:11442261-11441946 (view UCSC Genome Browser custom track) | 
| Alignm length: | 320 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 52 | 
| Conread position: | 436-753 | 
| Cow position: | chr6:25374399-25374081 (view UCSC Genome Browser custom track) | 
| Alignm length: | 320 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-754 | 
| Cow position: | chr6:5851864-5851552 (view UCSC Genome Browser custom track) | 
| Alignm length: | 321 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 225, 67 | 
| Conread position: | 436-754 | 
| Cow position: | chr6:7174941-7174631 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 8.40779e-45 | 
| Alignm gaps (pig, cow): | 44, 60 | 
| Conread position: | 436-754 | 
| Cow position: | chr6:8599347-8599667 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 142, 313 | 
| Conread position: | 436-754 | 
| Cow position: | chr6:11032634-11032315 (view UCSC Genome Browser custom track) | 
| Alignm length: | 321 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-754 | 
| Cow position: | chr6:46584843-46585164 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 128, 122 | 
| Conread position: | 436-754 | 
| Cow position: | chr6:50527211-50527533 (view UCSC Genome Browser custom track) | 
| Alignm length: | 327 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 25, 246 | 
| Conread position: | 436-758 | 
| Cow position: | chr6:19170843-19171167 (view UCSC Genome Browser custom track) | 
| Alignm length: | 327 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 260 | 
| Conread position: | 436-758 | 
| Cow position: | chr6:65016330-65016008 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 225, 123 | 
| Conread position: | 436-762 | 
| Cow position: | chr6:2074207-2074531 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 225, 245 | 
| Conread position: | 436-762 | 
| Cow position: | chr6:51733790-51734116 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 225, 201 | 
| Conread position: | 436-763 | 
| Cow position: | chr6:35132719-35133053 (view UCSC Genome Browser custom track) | 
| Alignm length: | 335 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 0 | 
| Conread position: | 436-766 | 
| Cow position: | chr6:29284248-29284585 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 94, 156 | 
| Conread position: | 436-767 | 
| Cow position: | chr6:31752611-31752941 (view UCSC Genome Browser custom track) | 
| Alignm length: | 333 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-770 | 
| Cow position: | chr6:23879350-23879015 (view UCSC Genome Browser custom track) | 
| Alignm length: | 338 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-770 | 
| Cow position: | chr6:37761948-37762283 (view UCSC Genome Browser custom track) | 
| Alignm length: | 340 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 70, 105 | 
| Conread position: | 436-770 | 
| Cow position: | chr6:43921345-43921680 (view UCSC Genome Browser custom track) | 
| Alignm length: | 337 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-770 | 
| Cow position: | chr6:61051414-61051079 (view UCSC Genome Browser custom track) | 
| Alignm length: | 337 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 104 | 
| Conread position: | 436-770 | 
| Cow position: | chr6:61549018-61548683 (view UCSC Genome Browser custom track) | 
| Alignm length: | 337 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-773 | 
| Cow position: | chr6:64097092-64096754 (view UCSC Genome Browser custom track) | 
| Alignm length: | 340 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-773 | 
| Cow position: | chr6:65818522-65818187 (view UCSC Genome Browser custom track) | 
| Alignm length: | 340 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-774 | 
| Cow position: | chr6:44017119-44016774 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 254 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 13, 263 | 
| Conread position: | 436-780 | 
| Cow position: | chr6:41876492-41876149 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 217, 226 | 
| Conread position: | 436-797 | 
| Cow position: | chr6:1406444-1406081 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-798 | 
| Cow position: | chr6:33884374-33884011 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 274 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-798 | 
| Cow position: | chr6:43039621-43039982 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 266 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 98 | 
| Conread position: | 436-799 | 
| Cow position: | chr6:27152384-27152748 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 266 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-799 | 
| Cow position: | chr6:41158612-41158248 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 272 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-801 | 
| Cow position: | chr6:33921694-33921332 (view UCSC Genome Browser custom track) | 
| Alignm length: | 371 | 
| Alignm identity: | 260 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 141, 214 | 
| Conread position: | 436-805 | 
| Cow position: | chr6:21164012-21164383 (view UCSC Genome Browser custom track) | 
| Alignm length: | 373 | 
| Alignm identity: | 277 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-806 | 
| Cow position: | chr6:3445105-3444744 (view UCSC Genome Browser custom track) | 
| Alignm length: | 373 | 
| Alignm identity: | 270 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 225, 50 | 
| Conread position: | 436-806 | 
| Cow position: | chr6:22043301-22042933 (view UCSC Genome Browser custom track) | 
| Alignm length: | 373 | 
| Alignm identity: | 275 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-806 | 
| Cow position: | chr6:60166792-60166403 (view UCSC Genome Browser custom track) | 
| Alignm length: | 394 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 4e-37 | 
| Alignm gaps (pig, cow): | 92, 266 | 
| Conread position: | 436-807 | 
| Cow position: | chr6:4681310-4681687 (view UCSC Genome Browser custom track) | 
| Alignm length: | 384 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 58, 32 | 
| Conread position: | 436-807 | 
| Cow position: | chr6:38872819-38872448 (view UCSC Genome Browser custom track) | 
| Alignm length: | 375 | 
| Alignm identity: | 275 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 225, 122 | 
| Conread position: | 436-808 | 
| Cow position: | chr6:25790029-25789654 (view UCSC Genome Browser custom track) | 
| Alignm length: | 376 | 
| Alignm identity: | 274 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 0 | 
| Conread position: | 436-808 | 
| Cow position: | chr6:40975873-40976245 (view UCSC Genome Browser custom track) | 
| Alignm length: | 374 | 
| Alignm identity: | 260 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 224, 32 | 
| Conread position: | 436-808 | 
| Cow position: | chr6:46391254-46391621 (view UCSC Genome Browser custom track) | 
| Alignm length: | 376 | 
| Alignm identity: | 277 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 110, 202 | 
| Conread position: | 436-809 | 
| Cow position: | chr6:22804813-22804435 (view UCSC Genome Browser custom track) | 
| Alignm length: | 381 | 
| Alignm identity: | 262 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 90, 170 | 
| Conread position: | 436-809 | 
| Cow position: | chr6:57473954-57474308 (view UCSC Genome Browser custom track) | 
| Alignm length: | 376 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 57, 82 | 
| Conread position: | 436-810 | 
| Cow position: | chr6:14389017-14388641 (view UCSC Genome Browser custom track) | 
| Alignm length: | 378 | 
| Alignm identity: | 276 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-810 | 
| Cow position: | chr6:19103199-19102822 (view UCSC Genome Browser custom track) | 
| Alignm length: | 382 | 
| Alignm identity: | 289 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 102 | 
| Conread position: | 436-810 | 
| Cow position: | chr6:23567899-23567523 (view UCSC Genome Browser custom track) | 
| Alignm length: | 378 | 
| Alignm identity: | 282 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-810 | 
| Cow position: | chr6:27541270-27541646 (view UCSC Genome Browser custom track) | 
| Alignm length: | 378 | 
| Alignm identity: | 280 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-810 | 
| Cow position: | chr6:37736629-37737005 (view UCSC Genome Browser custom track) | 
| Alignm length: | 378 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-810 | 
| Cow position: | chr6:39998772-39998396 (view UCSC Genome Browser custom track) | 
| Alignm length: | 378 | 
| Alignm identity: | 272 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 225, 257 | 
| Conread position: | 436-810 | 
| Cow position: | chr6:41823128-41822752 (view UCSC Genome Browser custom track) | 
| Alignm length: | 378 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-810 | 
| Cow position: | chr6:43999455-43999074 (view UCSC Genome Browser custom track) | 
| Alignm length: | 383 | 
| Alignm identity: | 274 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 106 | 
| Conread position: | 436-810 | 
| Cow position: | chr6:45976208-45976584 (view UCSC Genome Browser custom track) | 
| Alignm length: | 378 | 
| Alignm identity: | 281 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-810 | 
| Cow position: | chr6:46607798-46607424 (view UCSC Genome Browser custom track) | 
| Alignm length: | 378 | 
| Alignm identity: | 282 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 26 | 
| Conread position: | 436-810 | 
| Cow position: | chr6:49963454-49963082 (view UCSC Genome Browser custom track) | 
| Alignm length: | 379 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-810 | 
| Cow position: | chr6:55720877-55721253 (view UCSC Genome Browser custom track) | 
| Alignm length: | 378 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-810 | 
| Cow position: | chr6:63040626-63040250 (view UCSC Genome Browser custom track) | 
| Alignm length: | 378 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-811 | 
| Cow position: | chr6:18649204-18648829 (view UCSC Genome Browser custom track) | 
| Alignm length: | 378 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 54 | 
| Conread position: | 436-811 | 
| Cow position: | chr6:25207145-25207521 (view UCSC Genome Browser custom track) | 
| Alignm length: | 378 | 
| Alignm identity: | 280 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-811 | 
| Cow position: | chr6:45751642-45752018 (view UCSC Genome Browser custom track) | 
| Alignm length: | 378 | 
| Alignm identity: | 277 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-813 | 
| Cow position: | chr6:65261151-65260773 (view UCSC Genome Browser custom track) | 
| Alignm length: | 385 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 96, 213 | 
| Conread position: | 436-823 | 
| Cow position: | chr6:2898471-2898860 (view UCSC Genome Browser custom track) | 
| Alignm length: | 391 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-823 | 
| Cow position: | chr6:10013506-10013895 (view UCSC Genome Browser custom track) | 
| Alignm length: | 391 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-823 | 
| Cow position: | chr6:10266426-10266038 (view UCSC Genome Browser custom track) | 
| Alignm length: | 392 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 225, 306 | 
| Conread position: | 436-823 | 
| Cow position: | chr6:12972105-12972494 (view UCSC Genome Browser custom track) | 
| Alignm length: | 391 | 
| Alignm identity: | 289 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-823 | 
| Cow position: | chr6:20215687-20215298 (view UCSC Genome Browser custom track) | 
| Alignm length: | 391 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-823 | 
| Cow position: | chr6:20581070-20580682 (view UCSC Genome Browser custom track) | 
| Alignm length: | 391 | 
| Alignm identity: | 292 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-823 | 
| Cow position: | chr6:24757789-24757406 (view UCSC Genome Browser custom track) | 
| Alignm length: | 391 | 
| Alignm identity: | 281 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-823 | 
| Cow position: | chr6:25375967-25376357 (view UCSC Genome Browser custom track) | 
| Alignm length: | 392 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-823 | 
| Cow position: | chr6:38061321-38061709 (view UCSC Genome Browser custom track) | 
| Alignm length: | 392 | 
| Alignm identity: | 288 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-823 | 
| Cow position: | chr6:41470626-41471015 (view UCSC Genome Browser custom track) | 
| Alignm length: | 391 | 
| Alignm identity: | 286 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-823 | 
| Cow position: | chr6:41835009-41835398 (view UCSC Genome Browser custom track) | 
| Alignm length: | 391 | 
| Alignm identity: | 282 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-823 | 
| Cow position: | chr6:45666231-45665842 (view UCSC Genome Browser custom track) | 
| Alignm length: | 391 | 
| Alignm identity: | 280 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 225, 256 | 
| Conread position: | 436-823 | 
| Cow position: | chr6:45901284-45900895 (view UCSC Genome Browser custom track) | 
| Alignm length: | 391 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-823 | 
| Cow position: | chr6:54886906-54886517 (view UCSC Genome Browser custom track) | 
| Alignm length: | 391 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-827 | 
| Cow position: | chr6:28791387-28791783 (view UCSC Genome Browser custom track) | 
| Alignm length: | 402 | 
| Alignm identity: | 290 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 25, 119 | 
| Conread position: | 436-828 | 
| Cow position: | chr6:26830236-26830625 (view UCSC Genome Browser custom track) | 
| Alignm length: | 396 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-830 | 
| Cow position: | chr6:28486952-28486555 (view UCSC Genome Browser custom track) | 
| Alignm length: | 401 | 
| Alignm identity: | 285 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-831 | 
| Cow position: | chr6:8205896-8206292 (view UCSC Genome Browser custom track) | 
| Alignm length: | 400 | 
| Alignm identity: | 298 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 225, 256 | 
| Conread position: | 436-831 | 
| Cow position: | chr6:33460651-33461036 (view UCSC Genome Browser custom track) | 
| Alignm length: | 400 | 
| Alignm identity: | 296 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 225, 155 | 
| Conread position: | 436-832 | 
| Cow position: | chr6:12998125-12998522 (view UCSC Genome Browser custom track) | 
| Alignm length: | 400 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-836 | 
| Cow position: | chr6:6557580-6557982 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 289 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-836 | 
| Cow position: | chr6:13489103-13489507 (view UCSC Genome Browser custom track) | 
| Alignm length: | 405 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 225, 0 | 
| Conread position: | 436-836 | 
| Cow position: | chr6:13531373-13531775 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 294 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-836 | 
| Cow position: | chr6:14198356-14198755 (view UCSC Genome Browser custom track) | 
| Alignm length: | 403 | 
| Alignm identity: | 297 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 43 | 
| Conread position: | 436-836 | 
| Cow position: | chr6:16049587-16049192 (view UCSC Genome Browser custom track) | 
| Alignm length: | 406 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-836 | 
| Cow position: | chr6:18418893-18418491 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 292 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-836 | 
| Cow position: | chr6:18503105-18502703 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-836 | 
| Cow position: | chr6:20174091-20174493 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-836 | 
| Cow position: | chr6:24074995-24074605 (view UCSC Genome Browser custom track) | 
| Alignm length: | 405 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 225, 76 | 
| Conread position: | 436-836 | 
| Cow position: | chr6:25095583-25095985 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 294 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-836 | 
| Cow position: | chr6:25363260-25363662 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 293 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-836 | 
| Cow position: | chr6:27173550-27173954 (view UCSC Genome Browser custom track) | 
| Alignm length: | 406 | 
| Alignm identity: | 296 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-836 | 
| Cow position: | chr6:28172776-28173180 (view UCSC Genome Browser custom track) | 
| Alignm length: | 406 | 
| Alignm identity: | 285 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 247 | 
| Conread position: | 436-836 | 
| Cow position: | chr6:33489525-33489124 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 289 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-836 | 
| Cow position: | chr6:36258663-36259065 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 294 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-836 | 
| Cow position: | chr6:38917330-38916928 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 296 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-836 | 
| Cow position: | chr6:39088331-39088729 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 292 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-836 | 
| Cow position: | chr6:40449959-40449556 (view UCSC Genome Browser custom track) | 
| Alignm length: | 405 | 
| Alignm identity: | 290 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 57, 102 | 
| Conread position: | 436-836 | 
| Cow position: | chr6:40814070-40814474 (view UCSC Genome Browser custom track) | 
| Alignm length: | 406 | 
| Alignm identity: | 281 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 112, 386 | 
| Conread position: | 436-836 | 
| Cow position: | chr6:43955261-43955663 (view UCSC Genome Browser custom track) | 
| Alignm length: | 405 | 
| Alignm identity: | 297 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-836 | 
| Cow position: | chr6:45765412-45765010 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 294 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-836 | 
| Cow position: | chr6:45937988-45938390 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-836 | 
| Cow position: | chr6:52482054-52482456 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 296 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-836 | 
| Cow position: | chr6:55361665-55362065 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 296 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-836 | 
| Cow position: | chr6:56888121-56888514 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 288 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-836 | 
| Cow position: | chr6:59052127-59052529 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 293 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-836 | 
| Cow position: | chr6:63177829-63178231 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-837 | 
| Cow position: | chr6:6613999-6614395 (view UCSC Genome Browser custom track) | 
| Alignm length: | 405 | 
| Alignm identity: | 292 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 276, 68 | 
| Conread position: | 436-837 | 
| Cow position: | chr6:65910034-65910431 (view UCSC Genome Browser custom track) | 
| Alignm length: | 406 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 98 | 
| Conread position: | 436-838 | 
| Cow position: | chr6:17865100-17865498 (view UCSC Genome Browser custom track) | 
| Alignm length: | 405 | 
| Alignm identity: | 285 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 367, 38 | 
| Conread position: | 436-851 | 
| Cow position: | chr6:2875327-2874919 (view UCSC Genome Browser custom track) | 
| Alignm length: | 418 | 
| Alignm identity: | 296 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 225, 101 | 
| Conread position: | 436-851 | 
| Cow position: | chr6:6568525-6568116 (view UCSC Genome Browser custom track) | 
| Alignm length: | 420 | 
| Alignm identity: | 293 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-851 | 
| Cow position: | chr6:10044915-10045331 (view UCSC Genome Browser custom track) | 
| Alignm length: | 419 | 
| Alignm identity: | 293 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 126, 101 | 
| Conread position: | 436-851 | 
| Cow position: | chr6:11402029-11402445 (view UCSC Genome Browser custom track) | 
| Alignm length: | 419 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-851 | 
| Cow position: | chr6:35725645-35726067 (view UCSC Genome Browser custom track) | 
| Alignm length: | 431 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 39, 72 | 
| Conread position: | 436-851 | 
| Cow position: | chr6:36901719-36902136 (view UCSC Genome Browser custom track) | 
| Alignm length: | 419 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-851 | 
| Cow position: | chr6:42518528-42518947 (view UCSC Genome Browser custom track) | 
| Alignm length: | 425 | 
| Alignm identity: | 298 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 332 | 
| Conread position: | 436-851 | 
| Cow position: | chr6:55388446-55388862 (view UCSC Genome Browser custom track) | 
| Alignm length: | 419 | 
| Alignm identity: | 308 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-851 | 
| Cow position: | chr6:57521884-57522301 (view UCSC Genome Browser custom track) | 
| Alignm length: | 419 | 
| Alignm identity: | 302 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 225, 385 | 
| Conread position: | 436-852 | 
| Cow position: | chr6:68830002-68830420 (view UCSC Genome Browser custom track) | 
| Alignm length: | 422 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 112, 242 | 
| Conread position: | 436-853 | 
| Cow position: | chr6:8753749-8753331 (view UCSC Genome Browser custom track) | 
| Alignm length: | 422 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 225, 119 | 
| Conread position: | 436-853 | 
| Cow position: | chr6:20451665-20452081 (view UCSC Genome Browser custom track) | 
| Alignm length: | 424 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 95, 123 | 
| Conread position: | 436-854 | 
| Cow position: | chr6:47846-47432 (view UCSC Genome Browser custom track) | 
| Alignm length: | 422 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 112, 104 | 
| Conread position: | 436-854 | 
| Cow position: | chr6:2185793-2185374 (view UCSC Genome Browser custom track) | 
| Alignm length: | 422 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 225, 245 | 
| Conread position: | 436-854 | 
| Cow position: | chr6:6182018-6181597 (view UCSC Genome Browser custom track) | 
| Alignm length: | 423 | 
| Alignm identity: | 304 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 66, 385 | 
| Conread position: | 436-854 | 
| Cow position: | chr6:15137464-15137045 (view UCSC Genome Browser custom track) | 
| Alignm length: | 429 | 
| Alignm identity: | 300 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 134, 75 | 
| Conread position: | 436-854 | 
| Cow position: | chr6:15275532-15275112 (view UCSC Genome Browser custom track) | 
| Alignm length: | 423 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 225, 256 | 
| Conread position: | 436-854 | 
| Cow position: | chr6:28343210-28343622 (view UCSC Genome Browser custom track) | 
| Alignm length: | 423 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 265, 255 | 
| Conread position: | 436-854 | 
| Cow position: | chr6:29210059-29210471 (view UCSC Genome Browser custom track) | 
| Alignm length: | 423 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 56, 236 | 
| Conread position: | 436-854 | 
| Cow position: | chr6:36531984-36532403 (view UCSC Genome Browser custom track) | 
| Alignm length: | 423 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 225, 122 | 
| Conread position: | 436-854 | 
| Cow position: | chr6:40358169-40357748 (view UCSC Genome Browser custom track) | 
| Alignm length: | 423 | 
| Alignm identity: | 294 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 385 | 
| Conread position: | 436-854 | 
| Cow position: | chr6:40549992-40549572 (view UCSC Genome Browser custom track) | 
| Alignm length: | 423 | 
| Alignm identity: | 297 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 225, 256 | 
| Conread position: | 436-854 | 
| Cow position: | chr6:51718264-51718684 (view UCSC Genome Browser custom track) | 
| Alignm length: | 423 | 
| Alignm identity: | 302 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 225, 384 | 
| Conread position: | 436-854 | 
| Cow position: | chr6:54647966-54647547 (view UCSC Genome Browser custom track) | 
| Alignm length: | 426 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 151, 314 | 
| Conread position: | 436-854 | 
| Cow position: | chr6:55040658-55040237 (view UCSC Genome Browser custom track) | 
| Alignm length: | 423 | 
| Alignm identity: | 302 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 226, 385 | 
| Conread position: | 436-854 | 
| Cow position: | chr6:55538566-55538148 (view UCSC Genome Browser custom track) | 
| Alignm length: | 425 | 
| Alignm identity: | 304 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 35, 239 | 
| Conread position: | 436-854 | 
| Cow position: | chr6:55903798-55904212 (view UCSC Genome Browser custom track) | 
| Alignm length: | 423 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 225, 73 | 
| Conread position: | 436-854 | 
| Cow position: | chr6:60877004-60877424 (view UCSC Genome Browser custom track) | 
| Alignm length: | 424 | 
| Alignm identity: | 308 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 108, 100 | 
| Conread position: | 436-854 | 
| Cow position: | chr6:65844764-65845178 (view UCSC Genome Browser custom track) | 
| Alignm length: | 424 | 
| Alignm identity: | 298 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 100 | 
| Conread position: | 436-854 | 
| Cow position: | chr6:66199350-66199762 (view UCSC Genome Browser custom track) | 
| Alignm length: | 423 | 
| Alignm identity: | 285 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 144, 25 | 
| Conread position: | 436-854 | 
| Cow position: | chr6:66566016-66566434 (view UCSC Genome Browser custom track) | 
| Alignm length: | 422 | 
| Alignm identity: | 300 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 226, 50 | 
| Conread position: | 436-858 | 
| Cow position: | chr6:60456390-60456810 (view UCSC Genome Browser custom track) | 
| Alignm length: | 426 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 224, 210 | 
| Conread position: | 436-859 | 
| Cow position: | chr6:9751490-9751068 (view UCSC Genome Browser custom track) | 
| Alignm length: | 438 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 48 | 
| Conread position: | 436-860 | 
| Cow position: | chr6:327654-327221 (view UCSC Genome Browser custom track) | 
| Alignm length: | 435 | 
| Alignm identity: | 304 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-860 | 
| Cow position: | chr6:1797334-1797760 (view UCSC Genome Browser custom track) | 
| Alignm length: | 429 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-860 | 
| Cow position: | chr6:1817306-1816884 (view UCSC Genome Browser custom track) | 
| Alignm length: | 427 | 
| Alignm identity: | 302 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 110, 104 | 
| Conread position: | 436-860 | 
| Cow position: | chr6:7137633-7137208 (view UCSC Genome Browser custom track) | 
| Alignm length: | 429 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-860 | 
| Cow position: | chr6:7466942-7466517 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-860 | 
| Cow position: | chr6:9226227-9226651 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-860 | 
| Cow position: | chr6:9320989-9321419 (view UCSC Genome Browser custom track) | 
| Alignm length: | 432 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-860 | 
| Cow position: | chr6:11869227-11868802 (view UCSC Genome Browser custom track) | 
| Alignm length: | 429 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 32 | 
| Conread position: | 436-860 | 
| Cow position: | chr6:12662624-12662195 (view UCSC Genome Browser custom track) | 
| Alignm length: | 432 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 104 | 
| Conread position: | 436-860 | 
| Cow position: | chr6:13494384-13493956 (view UCSC Genome Browser custom track) | 
| Alignm length: | 429 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 118, 0 | 
| Conread position: | 436-860 | 
| Cow position: | chr6:16645580-16646006 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-860 | 
| Cow position: | chr6:17632061-17631634 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 297 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 225, 0 | 
| Conread position: | 436-860 | 
| Cow position: | chr6:21712415-21712841 (view UCSC Genome Browser custom track) | 
| Alignm length: | 429 | 
| Alignm identity: | 302 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-860 | 
| Cow position: | chr6:28065697-28066127 (view UCSC Genome Browser custom track) | 
| Alignm length: | 434 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 32 | 
| Conread position: | 436-860 | 
| Cow position: | chr6:31520147-31520573 (view UCSC Genome Browser custom track) | 
| Alignm length: | 429 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-860 | 
| Cow position: | chr6:31548870-31548446 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 225, 256 | 
| Conread position: | 436-860 | 
| Cow position: | chr6:42481590-42482013 (view UCSC Genome Browser custom track) | 
| Alignm length: | 427 | 
| Alignm identity: | 293 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-860 | 
| Cow position: | chr6:43188452-43188877 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 222, 245 | 
| Conread position: | 436-860 | 
| Cow position: | chr6:44098647-44099067 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 351, 205 | 
| Conread position: | 436-860 | 
| Cow position: | chr6:46948521-46948947 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 294 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-860 | 
| Cow position: | chr6:49794667-49795093 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 308 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-860 | 
| Cow position: | chr6:51869646-51870069 (view UCSC Genome Browser custom track) | 
| Alignm length: | 427 | 
| Alignm identity: | 308 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 225, 101 | 
| Conread position: | 436-860 | 
| Cow position: | chr6:55239399-55239826 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 225, 0 | 
| Conread position: | 436-860 | 
| Cow position: | chr6:67214304-67214725 (view UCSC Genome Browser custom track) | 
| Alignm length: | 427 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 227, 51 | 
| Conread position: | 436-860 | 
| Cow position: | chr6:67403659-67403233 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-861 | 
| Cow position: | chr6:47540084-47540511 (view UCSC Genome Browser custom track) | 
| Alignm length: | 430 | 
| Alignm identity: | 331 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 144, 400 | 
| Conread position: | 436-861 | 
| Cow position: | chr6:50120226-50119806 (view UCSC Genome Browser custom track) | 
| Alignm length: | 435 | 
| Alignm identity: | 333 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 44 | 
| Conread position: | 436-862 | 
| Cow position: | chr6:1784206-1783796 (view UCSC Genome Browser custom track) | 
| Alignm length: | 430 | 
| Alignm identity: | 327 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 225, 191 | 
| Conread position: | 436-862 | 
| Cow position: | chr6:2607173-2607596 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 327 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 225, 201 | 
| Conread position: | 436-863 | 
| Cow position: | chr6:11288759-11288329 (view UCSC Genome Browser custom track) | 
| Alignm length: | 433 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 201, 258 | 
| Conread position: | 436-864 | 
| Cow position: | chr6:46633819-46634241 (view UCSC Genome Browser custom track) | 
| Alignm length: | 436 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 205 | 
| Conread position: | 436-865 | 
| Cow position: | chr6:43394241-43394655 (view UCSC Genome Browser custom track) | 
| Alignm length: | 434 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 94, 156 | 
| Conread position: | 436-866 | 
| Cow position: | chr6:59834787-59835220 (view UCSC Genome Browser custom track) | 
| Alignm length: | 435 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-867 | 
| Cow position: | chr6:76732-76299 (view UCSC Genome Browser custom track) | 
| Alignm length: | 437 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 37 | 
| Conread position: | 436-867 | 
| Cow position: | chr6:2389968-2389535 (view UCSC Genome Browser custom track) | 
| Alignm length: | 435 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-867 | 
| Cow position: | chr6:2867751-2867317 (view UCSC Genome Browser custom track) | 
| Alignm length: | 436 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 104 | 
| Conread position: | 436-867 | 
| Cow position: | chr6:7449204-7449638 (view UCSC Genome Browser custom track) | 
| Alignm length: | 436 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-867 | 
| Cow position: | chr6:11020367-11020801 (view UCSC Genome Browser custom track) | 
| Alignm length: | 436 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-867 | 
| Cow position: | chr6:11453158-11452724 (view UCSC Genome Browser custom track) | 
| Alignm length: | 436 | 
| Alignm identity: | 313 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-867 | 
| Cow position: | chr6:20268238-20268655 (view UCSC Genome Browser custom track) | 
| Alignm length: | 436 | 
| Alignm identity: | 313 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 87 | 
| Conread position: | 436-867 | 
| Cow position: | chr6:22736997-22736567 (view UCSC Genome Browser custom track) | 
| Alignm length: | 436 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-867 | 
| Cow position: | chr6:24262826-24263260 (view UCSC Genome Browser custom track) | 
| Alignm length: | 436 | 
| Alignm identity: | 308 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-867 | 
| Cow position: | chr6:28184612-28184178 (view UCSC Genome Browser custom track) | 
| Alignm length: | 436 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-867 | 
| Cow position: | chr6:28294116-28293682 (view UCSC Genome Browser custom track) | 
| Alignm length: | 436 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-867 | 
| Cow position: | chr6:34017014-34016580 (view UCSC Genome Browser custom track) | 
| Alignm length: | 437 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-867 | 
| Cow position: | chr6:43049720-43050152 (view UCSC Genome Browser custom track) | 
| Alignm length: | 436 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 225, 252 | 
| Conread position: | 436-867 | 
| Cow position: | chr6:45591854-45592292 (view UCSC Genome Browser custom track) | 
| Alignm length: | 441 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-867 | 
| Cow position: | chr6:45723416-45722974 (view UCSC Genome Browser custom track) | 
| Alignm length: | 444 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 102 | 
| Conread position: | 436-867 | 
| Cow position: | chr6:53271363-53271797 (view UCSC Genome Browser custom track) | 
| Alignm length: | 436 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-867 | 
| Cow position: | chr6:65863033-65863468 (view UCSC Genome Browser custom track) | 
| Alignm length: | 438 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-867 | 
| Cow position: | chr6:67818641-67818207 (view UCSC Genome Browser custom track) | 
| Alignm length: | 436 | 
| Alignm identity: | 313 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-868 | 
| Cow position: | chr6:58075781-58076219 (view UCSC Genome Browser custom track) | 
| Alignm length: | 447 | 
| Alignm identity: | 321 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 103, 207 | 
| Conread position: | 436-871 | 
| Cow position: | chr6:18912025-18911588 (view UCSC Genome Browser custom track) | 
| Alignm length: | 438 | 
| Alignm identity: | 308 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 225, 0 | 
| Conread position: | 436-871 | 
| Cow position: | chr6:19819153-19819591 (view UCSC Genome Browser custom track) | 
| Alignm length: | 440 | 
| Alignm identity: | 317 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-871 | 
| Cow position: | chr6:53542760-53542321 (view UCSC Genome Browser custom track) | 
| Alignm length: | 444 | 
| Alignm identity: | 317 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-872 | 
| Cow position: | chr6:3152921-3153360 (view UCSC Genome Browser custom track) | 
| Alignm length: | 441 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-872 | 
| Cow position: | chr6:13307689-13307256 (view UCSC Genome Browser custom track) | 
| Alignm length: | 443 | 
| Alignm identity: | 300 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 225, 67 | 
| Conread position: | 436-872 | 
| Cow position: | chr6:13945572-13946013 (view UCSC Genome Browser custom track) | 
| Alignm length: | 444 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-873 | 
| Cow position: | chr6:28000687-28000247 (view UCSC Genome Browser custom track) | 
| Alignm length: | 444 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 225, 80 | 
| Conread position: | 436-873 | 
| Cow position: | chr6:44146242-44145797 (view UCSC Genome Browser custom track) | 
| Alignm length: | 447 | 
| Alignm identity: | 317 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 123, 237 | 
| Conread position: | 436-873 | 
| Cow position: | chr6:65921046-65920597 (view UCSC Genome Browser custom track) | 
| Alignm length: | 456 | 
| Alignm identity: | 320 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 32 | 
| Conread position: | 436-875 | 
| Cow position: | chr6:21857445-21857888 (view UCSC Genome Browser custom track) | 
| Alignm length: | 446 | 
| Alignm identity: | 317 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-877 | 
| Cow position: | chr6:58940662-58940220 (view UCSC Genome Browser custom track) | 
| Alignm length: | 445 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 53 | 
| Conread position: | 436-878 | 
| Cow position: | chr6:18803350-18802907 (view UCSC Genome Browser custom track) | 
| Alignm length: | 446 | 
| Alignm identity: | 323 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-922 | 
| Cow position: | chr6:2196393-2196885 (view UCSC Genome Browser custom track) | 
| Alignm length: | 497 | 
| Alignm identity: | 343 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-931 | 
| Cow position: | chr6:19515559-19516055 (view UCSC Genome Browser custom track) | 
| Alignm length: | 501 | 
| Alignm identity: | 346 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 436-958 | 
| Cow position: | chr6:62665484-62666000 (view UCSC Genome Browser custom track) | 
| Alignm length: | 528 | 
| Alignm identity: | 364 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 89, 102 | 
| Conread position: | 436-990 | 
| Cow position: | chr6:30708488-30707933 (view UCSC Genome Browser custom track) | 
| Alignm length: | 557 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 437-540 | 
| Cow position: | chr6:20329067-20329170 (view UCSC Genome Browser custom track) | 
| Alignm length: | 104 | 
| Alignm identity: | 87 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 437-577 | 
| Cow position: | chr6:36892422-36892562 (view UCSC Genome Browser custom track) | 
| Alignm length: | 142 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 110, 101 | 
| Conread position: | 437-622 | 
| Cow position: | chr6:13406042-13406234 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 437-626 | 
| Cow position: | chr6:143798-143610 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 115, 15 | 
| Conread position: | 437-649 | 
| Cow position: | chr6:29239269-29239481 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 200, 66 | 
| Conread position: | 437-649 | 
| Cow position: | chr6:56376830-56376610 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 36, 0 | 
| Conread position: | 437-653 | 
| Cow position: | chr6:16596699-16596917 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 95, 185 | 
| Conread position: | 437-658 | 
| Cow position: | chr6:40139586-40139367 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 7.00649e-43 | 
| Alignm gaps (pig, cow): | 101, 0 | 
| Conread position: | 437-660 | 
| Cow position: | chr6:30826498-30826269 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 5.99994e-41 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 437-660 | 
| Cow position: | chr6:32420650-32420873 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 214, 84 | 
| Conread position: | 437-660 | 
| Cow position: | chr6:45065483-45065249 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 8e-33 | 
| Alignm gaps (pig, cow): | 24, 0 | 
| Conread position: | 437-661 | 
| Cow position: | chr6:44195064-44194825 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 55, 0 | 
| Conread position: | 437-661 | 
| Cow position: | chr6:47977641-47977864 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 31, 0 | 
| Conread position: | 437-661 | 
| Cow position: | chr6:53140834-53140611 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 121, 183 | 
| Conread position: | 437-665 | 
| Cow position: | chr6:39330822-39330594 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 437-668 | 
| Cow position: | chr6:47171757-47171985 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 36, 51 | 
| Conread position: | 437-669 | 
| Cow position: | chr6:3484696-3484463 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 224, 0 | 
| Conread position: | 437-671 | 
| Cow position: | chr6:63252339-63252100 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 151, 0 | 
| Conread position: | 437-673 | 
| Cow position: | chr6:3758852-3759089 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 95, 173 | 
| Conread position: | 437-675 | 
| Cow position: | chr6:51968723-51968963 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 5e-40 | 
| Alignm gaps (pig, cow): | 125, 87 | 
| Conread position: | 437-679 | 
| Cow position: | chr6:10706349-10706104 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 6.99949e-42 | 
| Alignm gaps (pig, cow): | 88, 38 | 
| Conread position: | 437-735 | 
| Cow position: | chr6:20245644-20245943 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 225, 0 | 
| Conread position: | 437-746 | 
| Cow position: | chr6:33895694-33895390 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 89, 40 | 
| Conread position: | 437-754 | 
| Cow position: | chr6:16675377-16675694 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 1.99993e-41 | 
| Alignm gaps (pig, cow): | 101, 198 | 
| Conread position: | 437-759 | 
| Cow position: | chr6:6068127-6067794 (view UCSC Genome Browser custom track) | 
| Alignm length: | 337 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 48 | 
| Conread position: | 437-759 | 
| Cow position: | chr6:22507312-22507629 (view UCSC Genome Browser custom track) | 
| Alignm length: | 325 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 223, 20 | 
| Conread position: | 437-762 | 
| Cow position: | chr6:33466665-33466986 (view UCSC Genome Browser custom track) | 
| Alignm length: | 329 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 110, 31 | 
| Conread position: | 437-773 | 
| Cow position: | chr6:10682302-10682644 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 250 | 
| Conread position: | 437-773 | 
| Cow position: | chr6:20689762-20689431 (view UCSC Genome Browser custom track) | 
| Alignm length: | 338 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 224, 105 | 
| Conread position: | 437-775 | 
| Cow position: | chr6:4389422-4389748 (view UCSC Genome Browser custom track) | 
| Alignm length: | 340 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 225, 31 | 
| Conread position: | 437-780 | 
| Cow position: | chr6:48872646-48872303 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 224, 186 | 
| Conread position: | 437-789 | 
| Cow position: | chr6:37644127-37644479 (view UCSC Genome Browser custom track) | 
| Alignm length: | 362 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 175, 84 | 
| Conread position: | 437-805 | 
| Cow position: | chr6:16625501-16625872 (view UCSC Genome Browser custom track) | 
| Alignm length: | 378 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 80, 251 | 
| Conread position: | 437-808 | 
| Cow position: | chr6:1174941-1174571 (view UCSC Genome Browser custom track) | 
| Alignm length: | 375 | 
| Alignm identity: | 272 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 289, 243 | 
| Conread position: | 437-808 | 
| Cow position: | chr6:45155683-45156037 (view UCSC Genome Browser custom track) | 
| Alignm length: | 374 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 117, 90 | 
| Conread position: | 437-808 | 
| Cow position: | chr6:61162269-61162637 (view UCSC Genome Browser custom track) | 
| Alignm length: | 378 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 78, 229 | 
| Conread position: | 437-810 | 
| Cow position: | chr6:60066033-60066408 (view UCSC Genome Browser custom track) | 
| Alignm length: | 377 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 110, 100 | 
| Conread position: | 437-817 | 
| Cow position: | chr6:12387765-12387386 (view UCSC Genome Browser custom track) | 
| Alignm length: | 388 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 101, 90 | 
| Conread position: | 437-831 | 
| Cow position: | chr6:10598689-10599069 (view UCSC Genome Browser custom track) | 
| Alignm length: | 397 | 
| Alignm identity: | 282 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 103 | 
| Conread position: | 437-836 | 
| Cow position: | chr6:444218-443817 (view UCSC Genome Browser custom track) | 
| Alignm length: | 403 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 110, 100 | 
| Conread position: | 437-836 | 
| Cow position: | chr6:14826910-14827283 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 273 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 224, 52 | 
| Conread position: | 437-837 | 
| Cow position: | chr6:42931536-42931148 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 277 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 250, 118 | 
| Conread position: | 437-838 | 
| Cow position: | chr6:42267426-42267819 (view UCSC Genome Browser custom track) | 
| Alignm length: | 407 | 
| Alignm identity: | 294 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 97, 201 | 
| Conread position: | 437-851 | 
| Cow position: | chr6:33852227-33851826 (view UCSC Genome Browser custom track) | 
| Alignm length: | 423 | 
| Alignm identity: | 293 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 56, 36 | 
| Conread position: | 437-860 | 
| Cow position: | chr6:12629579-12630005 (view UCSC Genome Browser custom track) | 
| Alignm length: | 439 | 
| Alignm identity: | 317 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 179, 31 | 
| Conread position: | 437-860 | 
| Cow position: | chr6:46292769-46292367 (view UCSC Genome Browser custom track) | 
| Alignm length: | 432 | 
| Alignm identity: | 296 | 
| Alignm E-value: | 1.99993e-41 | 
| Alignm gaps (pig, cow): | 36, 93 | 
| Conread position: | 437-862 | 
| Cow position: | chr6:15938284-15937870 (view UCSC Genome Browser custom track) | 
| Alignm length: | 440 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 214, 36 | 
| Conread position: | 437-862 | 
| Cow position: | chr6:36928211-36928637 (view UCSC Genome Browser custom track) | 
| Alignm length: | 433 | 
| Alignm identity: | 317 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 53, 210 | 
| Conread position: | 437-867 | 
| Cow position: | chr6:9235222-9235655 (view UCSC Genome Browser custom track) | 
| Alignm length: | 435 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 110, 100 | 
| Conread position: | 437-869 | 
| Cow position: | chr6:32867645-32867222 (view UCSC Genome Browser custom track) | 
| Alignm length: | 436 | 
| Alignm identity: | 319 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 224, 31 | 
| Conread position: | 437-877 | 
| Cow position: | chr6:51296640-51296217 (view UCSC Genome Browser custom track) | 
| Alignm length: | 447 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 225, 106 | 
| Conread position: | 438-660 | 
| Cow position: | chr6:46251403-46251178 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 96, 17 | 
| Conread position: | 438-661 | 
| Cow position: | chr6:65905009-65905228 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 117, 30 | 
| Conread position: | 438-672 | 
| Cow position: | chr6:19695103-19695338 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 222, 0 | 
| Conread position: | 438-694 | 
| Cow position: | chr6:37829858-37829598 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 91, 47 | 
| Conread position: | 438-747 | 
| Cow position: | chr6:16618731-16619034 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 5e-40 | 
| Alignm gaps (pig, cow): | 223, 74 | 
| Conread position: | 438-754 | 
| Cow position: | chr6:3885796-3885478 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 120, 0 | 
| Conread position: | 438-755 | 
| Cow position: | chr6:39099530-39099204 (view UCSC Genome Browser custom track) | 
| Alignm length: | 329 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 43, 11 | 
| Conread position: | 438-759 | 
| Cow position: | chr6:38770864-38771177 (view UCSC Genome Browser custom track) | 
| Alignm length: | 325 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 35, 129 | 
| Conread position: | 438-805 | 
| Cow position: | chr6:27093876-27093508 (view UCSC Genome Browser custom track) | 
| Alignm length: | 371 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 109, 99 | 
| Conread position: | 438-805 | 
| Cow position: | chr6:28700854-28700485 (view UCSC Genome Browser custom track) | 
| Alignm length: | 371 | 
| Alignm identity: | 270 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 109, 99 | 
| Conread position: | 438-807 | 
| Cow position: | chr6:38594940-38594577 (view UCSC Genome Browser custom track) | 
| Alignm length: | 376 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 54, 125 | 
| Conread position: | 438-808 | 
| Cow position: | chr6:24583680-24583302 (view UCSC Genome Browser custom track) | 
| Alignm length: | 381 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 79, 34 | 
| Conread position: | 438-851 | 
| Cow position: | chr6:12947791-12947378 (view UCSC Genome Browser custom track) | 
| Alignm length: | 416 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 223, 99 | 
| Conread position: | 438-851 | 
| Cow position: | chr6:38994087-38993665 (view UCSC Genome Browser custom track) | 
| Alignm length: | 424 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 5, 389 | 
| Conread position: | 438-851 | 
| Cow position: | chr6:47674685-47675098 (view UCSC Genome Browser custom track) | 
| Alignm length: | 417 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 109, 30 | 
| Conread position: | 438-858 | 
| Cow position: | chr6:24961728-24962126 (view UCSC Genome Browser custom track) | 
| Alignm length: | 422 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 113, 90 | 
| Conread position: | 438-860 | 
| Cow position: | chr6:4864974-4864568 (view UCSC Genome Browser custom track) | 
| Alignm length: | 429 | 
| Alignm identity: | 300 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 222, 49 | 
| Conread position: | 438-860 | 
| Cow position: | chr6:9737553-9737134 (view UCSC Genome Browser custom track) | 
| Alignm length: | 429 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 156, 245 | 
| Conread position: | 438-860 | 
| Cow position: | chr6:28112127-28111707 (view UCSC Genome Browser custom track) | 
| Alignm length: | 427 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 118, 124 | 
| Conread position: | 438-861 | 
| Cow position: | chr6:66235050-66235464 (view UCSC Genome Browser custom track) | 
| Alignm length: | 429 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 223, 30 | 
| Conread position: | 438-867 | 
| Cow position: | chr6:40251093-40250662 (view UCSC Genome Browser custom track) | 
| Alignm length: | 434 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 109, 99 | 
| Conread position: | 438-867 | 
| Cow position: | chr6:40278763-40279195 (view UCSC Genome Browser custom track) | 
| Alignm length: | 434 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 108, 99 | 
| Conread position: | 438-869 | 
| Cow position: | chr6:40031755-40032181 (view UCSC Genome Browser custom track) | 
| Alignm length: | 435 | 
| Alignm identity: | 327 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 129, 46 | 
| Conread position: | 439-554 | 
| Cow position: | chr6:7131285-7131170 (view UCSC Genome Browser custom track) | 
| Alignm length: | 116 | 
| Alignm identity: | 91 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 439-646 | 
| Cow position: | chr6:44098395-44098606 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 93, 18 | 
| Conread position: | 439-654 | 
| Cow position: | chr6:44375451-44375671 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 96, 175 | 
| Conread position: | 439-654 | 
| Cow position: | chr6:48327918-48328135 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 91, 29 | 
| Conread position: | 439-660 | 
| Cow position: | chr6:13717374-13717601 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 19, 24 | 
| Conread position: | 439-675 | 
| Cow position: | chr6:51970304-51970062 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 87, 159 | 
| Conread position: | 439-688 | 
| Cow position: | chr6:50625171-50625427 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 65, 29 | 
| Conread position: | 439-727 | 
| Cow position: | chr6:41357363-41357649 (view UCSC Genome Browser custom track) | 
| Alignm length: | 296 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 90, 51 | 
| Conread position: | 439-748 | 
| Cow position: | chr6:16765830-16765520 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 221, 0 | 
| Conread position: | 439-752 | 
| Cow position: | chr6:26654826-26655134 (view UCSC Genome Browser custom track) | 
| Alignm length: | 321 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 42, 51 | 
| Conread position: | 439-754 | 
| Cow position: | chr6:6839298-6839612 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 5e-40 | 
| Alignm gaps (pig, cow): | 85, 213 | 
| Conread position: | 439-754 | 
| Cow position: | chr6:21584203-21583875 (view UCSC Genome Browser custom track) | 
| Alignm length: | 333 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 84, 72 | 
| Conread position: | 439-754 | 
| Cow position: | chr6:42008787-42008468 (view UCSC Genome Browser custom track) | 
| Alignm length: | 325 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 4e-28 | 
| Alignm gaps (pig, cow): | 69, 55 | 
| Conread position: | 439-767 | 
| Cow position: | chr6:19115486-19115806 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 30, 143 | 
| Conread position: | 439-792 | 
| Cow position: | chr6:27365879-27366232 (view UCSC Genome Browser custom track) | 
| Alignm length: | 362 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 98, 248 | 
| Conread position: | 439-807 | 
| Cow position: | chr6:6944123-6943751 (view UCSC Genome Browser custom track) | 
| Alignm length: | 383 | 
| Alignm identity: | 265 | 
| Alignm E-value: | 8.40779e-45 | 
| Alignm gaps (pig, cow): | 51, 151 | 
| Conread position: | 439-811 | 
| Cow position: | chr6:31688824-31688455 (view UCSC Genome Browser custom track) | 
| Alignm length: | 384 | 
| Alignm identity: | 265 | 
| Alignm E-value: | 5e-40 | 
| Alignm gaps (pig, cow): | 96, 188 | 
| Conread position: | 439-867 | 
| Cow position: | chr6:52424583-52425014 (view UCSC Genome Browser custom track) | 
| Alignm length: | 434 | 
| Alignm identity: | 308 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 108, 98 | 
| Conread position: | 440-661 | 
| Cow position: | chr6:66433482-66433700 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 7.9874e-44 | 
| Alignm gaps (pig, cow): | 98, 0 | 
| Conread position: | 440-770 | 
| Cow position: | chr6:26667311-26666980 (view UCSC Genome Browser custom track) | 
| Alignm length: | 333 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 107, 97 | 
| Conread position: | 441-719 | 
| Cow position: | chr6:66169938-66170221 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 85, 160 | 
| Conread position: | 442-635 | 
| Cow position: | chr6:57680821-57680623 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 93, 25 | 
| Conread position: | 442-643 | 
| Cow position: | chr6:22663149-22662941 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 7e-32 | 
| Alignm gaps (pig, cow): | 84, 0 | 
| Conread position: | 442-654 | 
| Cow position: | chr6:19044905-19045115 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 0 | 
| Conread position: | 442-672 | 
| Cow position: | chr6:34030959-34031179 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 7e-32 | 
| Alignm gaps (pig, cow): | 17, 21 | 
| Conread position: | 442-746 | 
| Cow position: | chr6:7009308-7009587 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 93, 0 | 
| Conread position: | 442-758 | 
| Cow position: | chr6:19429026-19429345 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 85, 295 | 
| Conread position: | 442-759 | 
| Cow position: | chr6:28977484-28977146 (view UCSC Genome Browser custom track) | 
| Alignm length: | 339 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 5e-40 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 442-770 | 
| Cow position: | chr6:17456435-17456758 (view UCSC Genome Browser custom track) | 
| Alignm length: | 333 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 8e-33 | 
| Alignm gaps (pig, cow): | 84, 124 | 
| Conread position: | 442-770 | 
| Cow position: | chr6:45617879-45617546 (view UCSC Genome Browser custom track) | 
| Alignm length: | 336 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 105, 20 | 
| Conread position: | 442-808 | 
| Cow position: | chr6:4468329-4468685 (view UCSC Genome Browser custom track) | 
| Alignm length: | 376 | 
| Alignm identity: | 264 | 
| Alignm E-value: | 8.40779e-45 | 
| Alignm gaps (pig, cow): | 138, 36 | 
| Conread position: | 442-828 | 
| Cow position: | chr6:54202329-54201941 (view UCSC Genome Browser custom track) | 
| Alignm length: | 391 | 
| Alignm identity: | 285 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 105, 95 | 
| Conread position: | 442-835 | 
| Cow position: | chr6:28180398-28180013 (view UCSC Genome Browser custom track) | 
| Alignm length: | 398 | 
| Alignm identity: | 275 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 40 | 
| Conread position: | 442-836 | 
| Cow position: | chr6:3575002-3575400 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 289 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 97 | 
| Conread position: | 442-836 | 
| Cow position: | chr6:44578829-44578439 (view UCSC Genome Browser custom track) | 
| Alignm length: | 397 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 219, 233 | 
| Conread position: | 442-847 | 
| Cow position: | chr6:8562286-8562687 (view UCSC Genome Browser custom track) | 
| Alignm length: | 408 | 
| Alignm identity: | 292 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 219, 37 | 
| Conread position: | 442-847 | 
| Cow position: | chr6:27870320-27870743 (view UCSC Genome Browser custom track) | 
| Alignm length: | 429 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 7.00649e-43 | 
| Alignm gaps (pig, cow): | 91, 132 | 
| Conread position: | 442-847 | 
| Cow position: | chr6:35181682-35181291 (view UCSC Genome Browser custom track) | 
| Alignm length: | 409 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 25, 99 | 
| Conread position: | 442-854 | 
| Cow position: | chr6:9322704-9323136 (view UCSC Genome Browser custom track) | 
| Alignm length: | 435 | 
| Alignm identity: | 297 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 313 | 
| Conread position: | 442-854 | 
| Cow position: | chr6:46465393-46465797 (view UCSC Genome Browser custom track) | 
| Alignm length: | 415 | 
| Alignm identity: | 296 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 220, 317 | 
| Conread position: | 442-860 | 
| Cow position: | chr6:11169276-11169678 (view UCSC Genome Browser custom track) | 
| Alignm length: | 422 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 219, 45 | 
| Conread position: | 442-860 | 
| Cow position: | chr6:32269287-32268896 (view UCSC Genome Browser custom track) | 
| Alignm length: | 426 | 
| Alignm identity: | 288 | 
| Alignm E-value: | 8e-33 | 
| Alignm gaps (pig, cow): | 86, 32 | 
| Conread position: | 442-860 | 
| Cow position: | chr6:46224970-46224552 (view UCSC Genome Browser custom track) | 
| Alignm length: | 422 | 
| Alignm identity: | 297 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 105, 95 | 
| Conread position: | 442-861 | 
| Cow position: | chr6:51834968-51835378 (view UCSC Genome Browser custom track) | 
| Alignm length: | 423 | 
| Alignm identity: | 317 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 109, 97 | 
| Conread position: | 442-864 | 
| Cow position: | chr6:16659457-16659872 (view UCSC Genome Browser custom track) | 
| Alignm length: | 431 | 
| Alignm identity: | 273 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 139, 111 | 
| Conread position: | 443-672 | 
| Cow position: | chr6:60441711-60441932 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 9e-35 | 
| Alignm gaps (pig, cow): | 217, 143 | 
| Conread position: | 443-754 | 
| Cow position: | chr6:3449767-3449452 (view UCSC Genome Browser custom track) | 
| Alignm length: | 321 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 15, 20 | 
| Conread position: | 443-754 | 
| Cow position: | chr6:41445539-41445238 (view UCSC Genome Browser custom track) | 
| Alignm length: | 313 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 219, 86 | 
| Conread position: | 443-800 | 
| Cow position: | chr6:41557044-41557397 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 9e-35 | 
| Alignm gaps (pig, cow): | 98, 210 | 
| Conread position: | 443-804 | 
| Cow position: | chr6:60017640-60017990 (view UCSC Genome Browser custom track) | 
| Alignm length: | 363 | 
| Alignm identity: | 263 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 280, 36 | 
| Conread position: | 443-807 | 
| Cow position: | chr6:19145392-19145023 (view UCSC Genome Browser custom track) | 
| Alignm length: | 377 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 84, 64 | 
| Conread position: | 443-854 | 
| Cow position: | chr6:47026043-47026452 (view UCSC Genome Browser custom track) | 
| Alignm length: | 425 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 1.99993e-41 | 
| Alignm gaps (pig, cow): | 98, 131 | 
| Conread position: | 443-860 | 
| Cow position: | chr6:16699837-16700245 (view UCSC Genome Browser custom track) | 
| Alignm length: | 421 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 218, 99 | 
| Conread position: | 443-861 | 
| Cow position: | chr6:67187262-67187662 (view UCSC Genome Browser custom track) | 
| Alignm length: | 420 | 
| Alignm identity: | 308 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 50, 175 | 
| Conread position: | 444-601 | 
| Cow position: | chr6:15702884-15702728 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 104, 83 | 
| Conread position: | 444-649 | 
| Cow position: | chr6:39957928-39958138 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 78, 18 | 
| Conread position: | 444-678 | 
| Cow position: | chr6:61136735-61136967 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 8.40779e-45 | 
| Alignm gaps (pig, cow): | 217, 193 | 
| Conread position: | 444-757 | 
| Cow position: | chr6:65011864-65012169 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 217, 143 | 
| Conread position: | 444-765 | 
| Cow position: | chr6:33177026-33176712 (view UCSC Genome Browser custom track) | 
| Alignm length: | 325 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 217, 73 | 
| Conread position: | 444-821 | 
| Cow position: | chr6:49626922-49627297 (view UCSC Genome Browser custom track) | 
| Alignm length: | 381 | 
| Alignm identity: | 264 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 206, 98 | 
| Conread position: | 444-836 | 
| Cow position: | chr6:49684999-49684605 (view UCSC Genome Browser custom track) | 
| Alignm length: | 396 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 103, 93 | 
| Conread position: | 444-860 | 
| Cow position: | chr6:63197606-63197185 (view UCSC Genome Browser custom track) | 
| Alignm length: | 429 | 
| Alignm identity: | 283 | 
| Alignm E-value: | 6.99949e-42 | 
| Alignm gaps (pig, cow): | 84, 21 | 
| Conread position: | 445-679 | 
| Cow position: | chr6:65934941-65934710 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 97, 23 | 
| Conread position: | 445-810 | 
| Cow position: | chr6:17935458-17935091 (view UCSC Genome Browser custom track) | 
| Alignm length: | 369 | 
| Alignm identity: | 268 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 102, 92 | 
| Conread position: | 445-817 | 
| Cow position: | chr6:28519265-28519637 (view UCSC Genome Browser custom track) | 
| Alignm length: | 379 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 87, 39 | 
| Conread position: | 445-837 | 
| Cow position: | chr6:12515719-12516105 (view UCSC Genome Browser custom track) | 
| Alignm length: | 401 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 90, 69 | 
| Conread position: | 446-647 | 
| Cow position: | chr6:62921676-62921472 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 446-648 | 
| Cow position: | chr6:35435166-35435372 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 91, 0 | 
| Conread position: | 446-661 | 
| Cow position: | chr6:45279586-45279365 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 34, 0 | 
| Conread position: | 447-660 | 
| Cow position: | chr6:12100157-12100370 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 4e-38 | 
| Alignm gaps (pig, cow): | 26, 112 | 
| Conread position: | 447-764 | 
| Cow position: | chr6:13694019-13693697 (view UCSC Genome Browser custom track) | 
| Alignm length: | 329 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 82, 179 | 
| Conread position: | 447-819 | 
| Cow position: | chr6:6079341-6078961 (view UCSC Genome Browser custom track) | 
| Alignm length: | 385 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 91, 202 | 
| Conread position: | 447-836 | 
| Cow position: | chr6:33863326-33863717 (view UCSC Genome Browser custom track) | 
| Alignm length: | 393 | 
| Alignm identity: | 285 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 90 | 
| Conread position: | 447-837 | 
| Cow position: | chr6:67544722-67544339 (view UCSC Genome Browser custom track) | 
| Alignm length: | 394 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 213, 312 | 
| Conread position: | 447-860 | 
| Cow position: | chr6:8194860-8195277 (view UCSC Genome Browser custom track) | 
| Alignm length: | 419 | 
| Alignm identity: | 290 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 90 | 
| Conread position: | 448-622 | 
| Cow position: | chr6:41534204-41534382 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 89, 166 | 
| Conread position: | 448-850 | 
| Cow position: | chr6:23891113-23891524 (view UCSC Genome Browser custom track) | 
| Alignm length: | 423 | 
| Alignm identity: | 274 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 87, 213 | 
| Conread position: | 448-860 | 
| Cow position: | chr6:26412952-26413360 (view UCSC Genome Browser custom track) | 
| Alignm length: | 423 | 
| Alignm identity: | 298 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 44, 76 | 
| Conread position: | 449-645 | 
| Cow position: | chr6:53811287-53811484 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 22, 107 | 
| Conread position: | 449-650 | 
| Cow position: | chr6:23366208-23366000 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 80, 0 | 
| Conread position: | 449-660 | 
| Cow position: | chr6:29484684-29484895 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 5.99994e-41 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 449-727 | 
| Cow position: | chr6:38233565-38233834 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 166, 30 | 
| Conread position: | 449-751 | 
| Cow position: | chr6:55266052-55265754 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 99, 19 | 
| Conread position: | 449-767 | 
| Cow position: | chr6:66513495-66513184 (view UCSC Genome Browser custom track) | 
| Alignm length: | 320 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 26, 77 | 
| Conread position: | 449-770 | 
| Cow position: | chr6:47848133-47847807 (view UCSC Genome Browser custom track) | 
| Alignm length: | 330 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 77, 19 | 
| Conread position: | 449-813 | 
| Cow position: | chr6:619114-619493 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 77, 0 | 
| Conread position: | 449-847 | 
| Cow position: | chr6:56842732-56843122 (view UCSC Genome Browser custom track) | 
| Alignm length: | 401 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 213, 232 | 
| Conread position: | 449-851 | 
| Cow position: | chr6:24125700-24125311 (view UCSC Genome Browser custom track) | 
| Alignm length: | 407 | 
| Alignm identity: | 283 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 213, 85 | 
| Conread position: | 451-746 | 
| Cow position: | chr6:35180768-35180465 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 79, 118 | 
| Conread position: | 451-750 | 
| Cow position: | chr6:46205594-46205892 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 210, 15 | 
| Conread position: | 451-762 | 
| Cow position: | chr6:3561871-3562181 (view UCSC Genome Browser custom track) | 
| Alignm length: | 320 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 80, 11 | 
| Conread position: | 451-862 | 
| Cow position: | chr6:24781995-24781573 (view UCSC Genome Browser custom track) | 
| Alignm length: | 424 | 
| Alignm identity: | 308 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 75, 237 | 
| Conread position: | 453-617 | 
| Cow position: | chr6:42731944-42731781 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 94, 9 | 
| Conread position: | 453-650 | 
| Cow position: | chr6:6100150-6099954 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 5e-40 | 
| Alignm gaps (pig, cow): | 72, 0 | 
| Conread position: | 453-718 | 
| Cow position: | chr6:12578150-12578420 (view UCSC Genome Browser custom track) | 
| Alignm length: | 273 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 50, 114 | 
| Conread position: | 453-853 | 
| Cow position: | chr6:43789644-43789247 (view UCSC Genome Browser custom track) | 
| Alignm length: | 405 | 
| Alignm identity: | 293 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 248, 127 | 
| Conread position: | 454-649 | 
| Cow position: | chr6:56885538-56885733 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 7.9874e-44 | 
| Alignm gaps (pig, cow): | 93, 83 | 
| Conread position: | 454-745 | 
| Cow position: | chr6:24988402-24988113 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 1.99993e-41 | 
| Alignm gaps (pig, cow): | 84, 0 | 
| Conread position: | 454-833 | 
| Cow position: | chr6:10649446-10649071 (view UCSC Genome Browser custom track) | 
| Alignm length: | 388 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 71, 10 | 
| Conread position: | 454-851 | 
| Cow position: | chr6:3095381-3094980 (view UCSC Genome Browser custom track) | 
| Alignm length: | 403 | 
| Alignm identity: | 285 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 85 | 
| Conread position: | 454-861 | 
| Cow position: | chr6:444905-445301 (view UCSC Genome Browser custom track) | 
| Alignm length: | 414 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 361, 46 | 
| Conread position: | 454-873 | 
| Cow position: | chr6:65870604-65871023 (view UCSC Genome Browser custom track) | 
| Alignm length: | 424 | 
| Alignm identity: | 297 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 208, 14 | 
| Conread position: | 455-692 | 
| Cow position: | chr6:64039690-64039935 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 65, 7 | 
| Conread position: | 455-860 | 
| Cow position: | chr6:35103742-35103353 (view UCSC Genome Browser custom track) | 
| Alignm length: | 408 | 
| Alignm identity: | 289 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 206, 17 | 
| Conread position: | 457-660 | 
| Cow position: | chr6:66873909-66874111 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 4e-37 | 
| Alignm gaps (pig, cow): | 5, 0 | 
| Conread position: | 457-859 | 
| Cow position: | chr6:41824248-41823842 (view UCSC Genome Browser custom track) | 
| Alignm length: | 407 | 
| Alignm identity: | 290 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 204, 0 | 
| Conread position: | 459-810 | 
| Cow position: | chr6:6578192-6577839 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 88, 78 | 
| Conread position: | 461-770 | 
| Cow position: | chr6:31081634-31081943 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 200, 76 | 
| Conread position: | 462-667 | 
| Cow position: | chr6:40774784-40774581 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 8.40779e-45 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 462-668 | 
| Cow position: | chr6:53968898-53968688 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 68, 16 | 
| Conread position: | 462-740 | 
| Cow position: | chr6:39995522-39995234 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 46, 74 | 
| Conread position: | 462-785 | 
| Cow position: | chr6:64895667-64895989 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 64, 139 | 
| Conread position: | 463-644 | 
| Cow position: | chr6:240457-240641 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 72, 0 | 
| Conread position: | 463-686 | 
| Cow position: | chr6:2324616-2324382 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 27, 0 | 
| Conread position: | 463-770 | 
| Cow position: | chr6:51150632-51150938 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 74 | 
| Conread position: | 464-611 | 
| Cow position: | chr6:15944113-15943960 (view UCSC Genome Browser custom track) | 
| Alignm length: | 154 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 62, 0 | 
| Conread position: | 464-669 | 
| Cow position: | chr6:48578975-48578765 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 71, 205 | 
| Conread position: | 464-753 | 
| Cow position: | chr6:48107613-48107907 (view UCSC Genome Browser custom track) | 
| Alignm length: | 297 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 63, 153 | 
| Conread position: | 464-860 | 
| Cow position: | chr6:62925413-62925017 (view UCSC Genome Browser custom track) | 
| Alignm length: | 409 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 68, 125 | 
| Conread position: | 468-644 | 
| Cow position: | chr6:49694030-49694202 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 76, 0 | 
| Conread position: | 468-647 | 
| Cow position: | chr6:51581804-51581623 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 5.99994e-41 | 
| Alignm gaps (pig, cow): | 19, 0 | 
| Conread position: | 468-648 | 
| Cow position: | chr6:3928863-3929054 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 65, 103 | 
| Conread position: | 468-649 | 
| Cow position: | chr6:46866197-46866021 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 24, 0 | 
| Conread position: | 468-650 | 
| Cow position: | chr6:28080351-28080171 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 51, 31 | 
| Conread position: | 468-660 | 
| Cow position: | chr6:457891-457699 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 9e-35 | 
| Alignm gaps (pig, cow): | 143, 120 | 
| Conread position: | 468-660 | 
| Cow position: | chr6:49685151-49685342 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 11, 0 | 
| Conread position: | 468-661 | 
| Cow position: | chr6:43788925-43788739 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 31, 0 | 
| Conread position: | 468-672 | 
| Cow position: | chr6:28636437-28636232 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 79, 69 | 
| Conread position: | 468-694 | 
| Cow position: | chr6:19809270-19809494 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 180, 193 | 
| Conread position: | 468-745 | 
| Cow position: | chr6:55205849-55205570 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 54, 11 | 
| Conread position: | 468-758 | 
| Cow position: | chr6:27942626-27942918 (view UCSC Genome Browser custom track) | 
| Alignm length: | 298 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 4e-37 | 
| Alignm gaps (pig, cow): | 62, 17 | 
| Conread position: | 468-807 | 
| Cow position: | chr6:23889071-23888733 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 62, 11 | 
| Conread position: | 468-807 | 
| Cow position: | chr6:44906069-44906418 (view UCSC Genome Browser custom track) | 
| Alignm length: | 353 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 12, 205 | 
| Conread position: | 468-808 | 
| Cow position: | chr6:23003817-23003484 (view UCSC Genome Browser custom track) | 
| Alignm length: | 349 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 9e-35 | 
| Alignm gaps (pig, cow): | 59, 149 | 
| Conread position: | 468-810 | 
| Cow position: | chr6:19843014-19843358 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 79, 69 | 
| Conread position: | 468-810 | 
| Cow position: | chr6:53448638-53448983 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 74, 325 | 
| Conread position: | 468-811 | 
| Cow position: | chr6:31192736-31192391 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 79, 69 | 
| Conread position: | 468-836 | 
| Cow position: | chr6:1910907-1911279 (view UCSC Genome Browser custom track) | 
| Alignm length: | 374 | 
| Alignm identity: | 271 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 11, 71 | 
| Conread position: | 468-836 | 
| Cow position: | chr6:5751573-5751941 (view UCSC Genome Browser custom track) | 
| Alignm length: | 373 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 79, 69 | 
| Conread position: | 468-854 | 
| Cow position: | chr6:2110523-2110138 (view UCSC Genome Browser custom track) | 
| Alignm length: | 390 | 
| Alignm identity: | 271 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 193, 152 | 
| Conread position: | 468-854 | 
| Cow position: | chr6:24327550-24327167 (view UCSC Genome Browser custom track) | 
| Alignm length: | 396 | 
| Alignm identity: | 304 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 74, 237 | 
| Conread position: | 468-860 | 
| Cow position: | chr6:757963-758358 (view UCSC Genome Browser custom track) | 
| Alignm length: | 397 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 57, 70 | 
| Conread position: | 468-860 | 
| Cow position: | chr6:66363654-66363263 (view UCSC Genome Browser custom track) | 
| Alignm length: | 398 | 
| Alignm identity: | 293 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 74, 300 | 
| Conread position: | 468-867 | 
| Cow position: | chr6:40912809-40912416 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 79, 69 | 
| Conread position: | 468-867 | 
| Cow position: | chr6:62323441-62323034 (view UCSC Genome Browser custom track) | 
| Alignm length: | 409 | 
| Alignm identity: | 282 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 79, 69 | 
| Conread position: | 468-869 | 
| Cow position: | chr6:17090177-17090591 (view UCSC Genome Browser custom track) | 
| Alignm length: | 419 | 
| Alignm identity: | 282 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 14, 226 | 
| Conread position: | 468-869 | 
| Cow position: | chr6:32125658-32126054 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 298 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 193, 321 | 
| Conread position: | 469-649 | 
| Cow position: | chr6:28415108-28414929 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 10, 144 | 
| Conread position: | 470-759 | 
| Cow position: | chr6:52216162-52215872 (view UCSC Genome Browser custom track) | 
| Alignm length: | 297 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 6.99949e-42 | 
| Alignm gaps (pig, cow): | 179, 214 | 
| Conread position: | 470-759 | 
| Cow position: | chr6:52235653-52235363 (view UCSC Genome Browser custom track) | 
| Alignm length: | 297 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 6.99949e-42 | 
| Alignm gaps (pig, cow): | 179, 214 | 
| Conread position: | 470-854 | 
| Cow position: | chr6:34842966-34842581 (view UCSC Genome Browser custom track) | 
| Alignm length: | 388 | 
| Alignm identity: | 277 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 189, 289 | 
| Conread position: | 471-738 | 
| Cow position: | chr6:21732517-21732247 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 7.00649e-43 | 
| Alignm gaps (pig, cow): | 63, 207 | 
| Conread position: | 471-853 | 
| Cow position: | chr6:49399023-49398641 (view UCSC Genome Browser custom track) | 
| Alignm length: | 386 | 
| Alignm identity: | 277 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 134, 281 | 
| Conread position: | 472-836 | 
| Cow position: | chr6:57384099-57384478 (view UCSC Genome Browser custom track) | 
| Alignm length: | 384 | 
| Alignm identity: | 266 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 149, 319 | 
| Conread position: | 473-662 | 
| Cow position: | chr6:30473876-30474071 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 53, 0 | 
| Conread position: | 473-727 | 
| Cow position: | chr6:62979652-62979395 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 9e-35 | 
| Alignm gaps (pig, cow): | 71, 184 | 
| Conread position: | 473-810 | 
| Cow position: | chr6:37331558-37331891 (view UCSC Genome Browser custom track) | 
| Alignm length: | 345 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 66, 165 | 
| Conread position: | 473-821 | 
| Cow position: | chr6:49442702-49443027 (view UCSC Genome Browser custom track) | 
| Alignm length: | 352 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 5e-40 | 
| Alignm gaps (pig, cow): | 189, 82 | 
| Conread position: | 473-860 | 
| Cow position: | chr6:9009003-9008631 (view UCSC Genome Browser custom track) | 
| Alignm length: | 389 | 
| Alignm identity: | 286 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 342, 34 | 
| Conread position: | 474-831 | 
| Cow position: | chr6:6768873-6769227 (view UCSC Genome Browser custom track) | 
| Alignm length: | 362 | 
| Alignm identity: | 265 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 11, 268 | 
| Conread position: | 475-773 | 
| Cow position: | chr6:50802585-50802277 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 56, 268 | 
| Conread position: | 476-836 | 
| Cow position: | chr6:48290546-48290903 (view UCSC Genome Browser custom track) | 
| Alignm length: | 364 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 71, 61 | 
| Conread position: | 476-853 | 
| Cow position: | chr6:56849595-56849985 (view UCSC Genome Browser custom track) | 
| Alignm length: | 402 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 8.40779e-45 | 
| Alignm gaps (pig, cow): | 50, 300 | 
| Conread position: | 476-860 | 
| Cow position: | chr6:68340200-68339815 (view UCSC Genome Browser custom track) | 
| Alignm length: | 388 | 
| Alignm identity: | 283 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 71, 61 | 
| Conread position: | 476-867 | 
| Cow position: | chr6:23426792-23427186 (view UCSC Genome Browser custom track) | 
| Alignm length: | 396 | 
| Alignm identity: | 276 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 71, 61 | 
| Conread position: | 477-810 | 
| Cow position: | chr6:14690555-14690886 (view UCSC Genome Browser custom track) | 
| Alignm length: | 337 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 190, 63 | 
| Conread position: | 477-820 | 
| Cow position: | chr6:20056226-20056572 (view UCSC Genome Browser custom track) | 
| Alignm length: | 352 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 8e-34 | 
| Alignm gaps (pig, cow): | 53, 93 | 
| Conread position: | 477-867 | 
| Cow position: | chr6:5367085-5366692 (view UCSC Genome Browser custom track) | 
| Alignm length: | 395 | 
| Alignm identity: | 271 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 70, 60 | 
| Conread position: | 477-871 | 
| Cow position: | chr6:14225593-14225196 (view UCSC Genome Browser custom track) | 
| Alignm length: | 399 | 
| Alignm identity: | 286 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 70, 60 | 
| Conread position: | 478-672 | 
| Cow position: | chr6:7111989-7111796 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 80, 143 | 
| Conread position: | 478-759 | 
| Cow position: | chr6:24652579-24652299 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 214, 178 | 
| Conread position: | 478-806 | 
| Cow position: | chr6:2405176-2404853 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 51, 137 | 
| Conread position: | 479-688 | 
| Cow position: | chr6:1293663-1293452 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 1.99993e-41 | 
| Alignm gaps (pig, cow): | 184, 138 | 
| Conread position: | 479-758 | 
| Cow position: | chr6:43345852-43345578 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 177, 0 | 
| Conread position: | 479-759 | 
| Cow position: | chr6:1866283-1866564 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 77, 164 | 
| Conread position: | 479-836 | 
| Cow position: | chr6:58031724-58032081 (view UCSC Genome Browser custom track) | 
| Alignm length: | 363 | 
| Alignm identity: | 262 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 9, 159 | 
| Conread position: | 479-853 | 
| Cow position: | chr6:67430287-67429911 (view UCSC Genome Browser custom track) | 
| Alignm length: | 378 | 
| Alignm identity: | 263 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 183, 341 | 
| Conread position: | 479-860 | 
| Cow position: | chr6:21004256-21004652 (view UCSC Genome Browser custom track) | 
| Alignm length: | 400 | 
| Alignm identity: | 289 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 193 | 
| Conread position: | 480-661 | 
| Cow position: | chr6:30159440-30159627 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 46, 0 | 
| Conread position: | 480-679 | 
| Cow position: | chr6:31927653-31927850 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 181, 128 | 
| Conread position: | 480-747 | 
| Cow position: | chr6:27815876-27815625 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 72, 12 | 
| Conread position: | 480-759 | 
| Cow position: | chr6:31879764-31879490 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 52, 28 | 
| Conread position: | 480-810 | 
| Cow position: | chr6:17364757-17364426 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 57 | 
| Conread position: | 480-829 | 
| Cow position: | chr6:23117797-23117445 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 5, 341 | 
| Conread position: | 480-833 | 
| Cow position: | chr6:7994877-7994512 (view UCSC Genome Browser custom track) | 
| Alignm length: | 373 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 68, 40 | 
| Conread position: | 480-837 | 
| Cow position: | chr6:6343026-6343385 (view UCSC Genome Browser custom track) | 
| Alignm length: | 367 | 
| Alignm identity: | 276 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 48, 13 | 
| Conread position: | 480-867 | 
| Cow position: | chr6:46371841-46371453 (view UCSC Genome Browser custom track) | 
| Alignm length: | 393 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 57 | 
| Conread position: | 481-860 | 
| Cow position: | chr6:33302015-33302391 (view UCSC Genome Browser custom track) | 
| Alignm length: | 386 | 
| Alignm identity: | 290 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 181, 136 | 
| Conread position: | 482-756 | 
| Cow position: | chr6:24965565-24965285 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 60, 169 | 
| Conread position: | 482-808 | 
| Cow position: | chr6:46161919-46161592 (view UCSC Genome Browser custom track) | 
| Alignm length: | 329 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 180, 200 | 
| Conread position: | 482-810 | 
| Cow position: | chr6:62038148-62038476 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 11, 57 | 
| Conread position: | 482-827 | 
| Cow position: | chr6:21719173-21718828 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 254 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 179, 55 | 
| Conread position: | 482-854 | 
| Cow position: | chr6:11721173-11720799 (view UCSC Genome Browser custom track) | 
| Alignm length: | 376 | 
| Alignm identity: | 268 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 179, 338 | 
| Conread position: | 483-791 | 
| Cow position: | chr6:6060951-6060640 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 178, 0 | 
| Conread position: | 483-851 | 
| Cow position: | chr6:19427050-19427425 (view UCSC Genome Browser custom track) | 
| Alignm length: | 377 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 57, 184 | 
| Conread position: | 484-773 | 
| Cow position: | chr6:32854652-32854373 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 53, 25 | 
| Conread position: | 484-799 | 
| Cow position: | chr6:68272514-68272205 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 177, 102 | 
| Conread position: | 484-822 | 
| Cow position: | chr6:126351-126012 (view UCSC Genome Browser custom track) | 
| Alignm length: | 342 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 63, 53 | 
| Conread position: | 484-860 | 
| Cow position: | chr6:37389066-37389444 (view UCSC Genome Browser custom track) | 
| Alignm length: | 381 | 
| Alignm identity: | 270 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 63, 53 | 
| Conread position: | 487-801 | 
| Cow position: | chr6:59597267-59597583 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 175, 0 | 
| Conread position: | 487-810 | 
| Cow position: | chr6:4948552-4948877 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 174, 0 | 
| Conread position: | 487-831 | 
| Cow position: | chr6:64304014-64303693 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 59, 51 | 
| Conread position: | 487-851 | 
| Cow position: | chr6:10253831-10254210 (view UCSC Genome Browser custom track) | 
| Alignm length: | 388 | 
| Alignm identity: | 260 | 
| Alignm E-value: | 8e-33 | 
| Alignm gaps (pig, cow): | 157, 52 | 
| Conread position: | 487-852 | 
| Cow position: | chr6:45690999-45690618 (view UCSC Genome Browser custom track) | 
| Alignm length: | 385 | 
| Alignm identity: | 260 | 
| Alignm E-value: | 4e-38 | 
| Alignm gaps (pig, cow): | 139, 207 | 
| Conread position: | 487-861 | 
| Cow position: | chr6:55688661-55689021 (view UCSC Genome Browser custom track) | 
| Alignm length: | 379 | 
| Alignm identity: | 264 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 174, 50 | 
| Conread position: | 487-867 | 
| Cow position: | chr6:11034497-11034114 (view UCSC Genome Browser custom track) | 
| Alignm length: | 386 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 50 | 
| Conread position: | 488-688 | 
| Cow position: | chr6:26915994-26916195 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 59, 49 | 
| Conread position: | 488-770 | 
| Cow position: | chr6:27401471-27401190 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 59, 49 | 
| Conread position: | 488-851 | 
| Cow position: | chr6:9741926-9742291 (view UCSC Genome Browser custom track) | 
| Alignm length: | 367 | 
| Alignm identity: | 264 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 59, 49 | 
| Conread position: | 489-630 | 
| Cow position: | chr6:16288844-16288703 (view UCSC Genome Browser custom track) | 
| Alignm length: | 143 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 69, 49 | 
| Conread position: | 489-651 | 
| Cow position: | chr6:59687357-59687519 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 8e-33 | 
| Alignm gaps (pig, cow): | 39, 141 | 
| Conread position: | 489-656 | 
| Cow position: | chr6:31048937-31048769 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 69, 49 | 
| Conread position: | 489-770 | 
| Cow position: | chr6:17352241-17351959 (view UCSC Genome Browser custom track) | 
| Alignm length: | 284 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 58, 48 | 
| Conread position: | 489-864 | 
| Cow position: | chr6:24004153-24004528 (view UCSC Genome Browser custom track) | 
| Alignm length: | 391 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 36, 211 | 
| Conread position: | 490-689 | 
| Cow position: | chr6:31739158-31739364 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 8.40779e-45 | 
| Alignm gaps (pig, cow): | 163, 0 | 
| Conread position: | 491-759 | 
| Cow position: | chr6:68252398-68252667 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 170, 0 | 
| Conread position: | 492-644 | 
| Cow position: | chr6:20170755-20170912 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 34, 0 | 
| Conread position: | 492-660 | 
| Cow position: | chr6:63054289-63054128 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 157, 50 | 
| Conread position: | 492-669 | 
| Cow position: | chr6:33855432-33855607 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 169, 144 | 
| Conread position: | 492-693 | 
| Cow position: | chr6:15328543-15328749 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 38, 123 | 
| Conread position: | 492-694 | 
| Cow position: | chr6:28509471-28509678 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 31, 17 | 
| Conread position: | 492-727 | 
| Cow position: | chr6:33215757-33215528 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 218, 42 | 
| Conread position: | 492-733 | 
| Cow position: | chr6:37597980-37598215 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 133, 48 | 
| Conread position: | 492-769 | 
| Cow position: | chr6:19842012-19841731 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 35, 15 | 
| Conread position: | 492-805 | 
| Cow position: | chr6:65041217-65040903 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 55, 45 | 
| Conread position: | 492-807 | 
| Cow position: | chr6:37390624-37390947 (view UCSC Genome Browser custom track) | 
| Alignm length: | 325 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 45, 188 | 
| Conread position: | 492-810 | 
| Cow position: | chr6:53052344-53052664 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 55, 45 | 
| Conread position: | 492-835 | 
| Cow position: | chr6:16706625-16706958 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 254 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 169, 151 | 
| Conread position: | 492-836 | 
| Cow position: | chr6:3157611-3157265 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 56, 45 | 
| Conread position: | 492-836 | 
| Cow position: | chr6:5944686-5944340 (view UCSC Genome Browser custom track) | 
| Alignm length: | 350 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 170, 200 | 
| Conread position: | 492-851 | 
| Cow position: | chr6:6642970-6642629 (view UCSC Genome Browser custom track) | 
| Alignm length: | 362 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 166, 52 | 
| Conread position: | 493-659 | 
| Cow position: | chr6:32300943-32300777 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 54, 44 | 
| Conread position: | 493-766 | 
| Cow position: | chr6:40450391-40450658 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 9e-35 | 
| Alignm gaps (pig, cow): | 168, 31 | 
| Conread position: | 493-813 | 
| Cow position: | chr6:6123825-6124140 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 44, 14 | 
| Conread position: | 493-836 | 
| Cow position: | chr6:40320311-40320643 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 5e-40 | 
| Alignm gaps (pig, cow): | 169, 101 | 
| Conread position: | 493-851 | 
| Cow position: | chr6:61631997-61631637 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 268 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 169, 144 | 
| Conread position: | 494-694 | 
| Cow position: | chr6:55453106-55452897 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 30, 0 | 
| Conread position: | 494-807 | 
| Cow position: | chr6:25407787-25407465 (view UCSC Genome Browser custom track) | 
| Alignm length: | 329 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 149, 46 | 
| Conread position: | 494-836 | 
| Cow position: | chr6:61257630-61257971 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 167, 43 | 
| Conread position: | 494-866 | 
| Cow position: | chr6:64338005-64337630 (view UCSC Genome Browser custom track) | 
| Alignm length: | 377 | 
| Alignm identity: | 262 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 53, 43 | 
| Conread position: | 495-770 | 
| Cow position: | chr6:14631207-14631485 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 52, 42 | 
| Conread position: | 495-836 | 
| Cow position: | chr6:8207729-8207387 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 166, 42 | 
| Conread position: | 496-854 | 
| Cow position: | chr6:65874335-65873978 (view UCSC Genome Browser custom track) | 
| Alignm length: | 362 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 162, 71 | 
| Conread position: | 496-860 | 
| Cow position: | chr6:14958723-14958365 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 159, 87 | 
| Conread position: | 496-860 | 
| Cow position: | chr6:24237584-24237218 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 51, 41 | 
| Conread position: | 496-860 | 
| Cow position: | chr6:25217706-25217358 (view UCSC Genome Browser custom track) | 
| Alignm length: | 367 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 166, 113 | 
| Conread position: | 497-653 | 
| Cow position: | chr6:14897138-14896988 (view UCSC Genome Browser custom track) | 
| Alignm length: | 157 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 19, 0 | 
| Conread position: | 497-667 | 
| Cow position: | chr6:46860578-46860409 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 7e-32 | 
| Alignm gaps (pig, cow): | 161, 0 | 
| Conread position: | 497-811 | 
| Cow position: | chr6:180743-180432 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 164, 184 | 
| Conread position: | 498-633 | 
| Cow position: | chr6:51525967-51525832 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 498-660 | 
| Cow position: | chr6:21870059-21869892 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 78, 19 | 
| Conread position: | 499-748 | 
| Cow position: | chr6:42416465-42416713 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 49, 39 | 
| Conread position: | 499-767 | 
| Cow position: | chr6:4164769-4164508 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 499-810 | 
| Cow position: | chr6:33147685-33147990 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 162, 41 | 
| Conread position: | 500-807 | 
| Cow position: | chr6:46565145-46564841 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 44, 82 | 
| Conread position: | 500-836 | 
| Cow position: | chr6:45130300-45129962 (view UCSC Genome Browser custom track) | 
| Alignm length: | 340 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 47, 37 | 
| Conread position: | 501-622 | 
| Cow position: | chr6:21184184-21184305 (view UCSC Genome Browser custom track) | 
| Alignm length: | 122 | 
| Alignm identity: | 97 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 501-660 | 
| Cow position: | chr6:53553118-53553276 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 4e-37 | 
| Alignm gaps (pig, cow): | 11, 0 | 
| Conread position: | 501-836 | 
| Cow position: | chr6:55610614-55610280 (view UCSC Genome Browser custom track) | 
| Alignm length: | 342 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 35, 174 | 
| Conread position: | 501-854 | 
| Cow position: | chr6:47383626-47383981 (view UCSC Genome Browser custom track) | 
| Alignm length: | 358 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 161, 90 | 
| Conread position: | 501-861 | 
| Cow position: | chr6:62331293-62330934 (view UCSC Genome Browser custom track) | 
| Alignm length: | 364 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 46, 36 | 
| Conread position: | 502-762 | 
| Cow position: | chr6:66431464-66431723 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 31, 166 | 
| Conread position: | 502-860 | 
| Cow position: | chr6:55594019-55594373 (view UCSC Genome Browser custom track) | 
| Alignm length: | 363 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 159, 53 | 
| Conread position: | 502-862 | 
| Cow position: | chr6:8804918-8804549 (view UCSC Genome Browser custom track) | 
| Alignm length: | 379 | 
| Alignm identity: | 272 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 146, 114 | 
| Conread position: | 503-770 | 
| Cow position: | chr6:14891206-14890938 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 44, 34 | 
| Conread position: | 504-801 | 
| Cow position: | chr6:37487675-37487377 (view UCSC Genome Browser custom track) | 
| Alignm length: | 301 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 157, 55 | 
| Conread position: | 504-851 | 
| Cow position: | chr6:55608185-55607841 (view UCSC Genome Browser custom track) | 
| Alignm length: | 356 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 25, 264 | 
| Conread position: | 505-694 | 
| Cow position: | chr6:52209296-52209485 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 5e-40 | 
| Alignm gaps (pig, cow): | 45, 35 | 
| Conread position: | 505-751 | 
| Cow position: | chr6:1944358-1944601 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 7.00649e-43 | 
| Alignm gaps (pig, cow): | 123, 187 | 
| Conread position: | 506-664 | 
| Cow position: | chr6:1889507-1889346 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 33, 0 | 
| Conread position: | 506-767 | 
| Cow position: | chr6:16397553-16397292 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 25, 35 | 
| Conread position: | 506-804 | 
| Cow position: | chr6:16492277-16491994 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 155, 58 | 
| Conread position: | 506-805 | 
| Cow position: | chr6:41961342-41961039 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 23, 180 | 
| Conread position: | 507-669 | 
| Cow position: | chr6:5462645-5462486 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 154, 85 | 
| Conread position: | 507-851 | 
| Cow position: | chr6:14133587-14133933 (view UCSC Genome Browser custom track) | 
| Alignm length: | 349 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 30 | 
| Conread position: | 507-862 | 
| Cow position: | chr6:52248492-52248149 (view UCSC Genome Browser custom track) | 
| Alignm length: | 362 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 5e-40 | 
| Alignm gaps (pig, cow): | 140, 58 | 
| Conread position: | 508-773 | 
| Cow position: | chr6:54447803-54447531 (view UCSC Genome Browser custom track) | 
| Alignm length: | 275 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 67, 131 | 
| Conread position: | 508-852 | 
| Cow position: | chr6:18080885-18080535 (view UCSC Genome Browser custom track) | 
| Alignm length: | 351 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 8.40779e-45 | 
| Alignm gaps (pig, cow): | 43, 0 | 
| Conread position: | 508-854 | 
| Cow position: | chr6:1264240-1264579 (view UCSC Genome Browser custom track) | 
| Alignm length: | 351 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 153, 173 | 
| Conread position: | 510-654 | 
| Cow position: | chr6:15923592-15923448 (view UCSC Genome Browser custom track) | 
| Alignm length: | 145 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 511-837 | 
| Cow position: | chr6:52431399-52431070 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 71, 255 | 
| Conread position: | 514-738 | 
| Cow position: | chr6:22921024-22921249 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 147, 0 | 
| Conread position: | 514-853 | 
| Cow position: | chr6:6569758-6570095 (view UCSC Genome Browser custom track) | 
| Alignm length: | 343 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 147, 240 | 
| Conread position: | 515-836 | 
| Cow position: | chr6:43604409-43604732 (view UCSC Genome Browser custom track) | 
| Alignm length: | 325 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 22 | 
| Conread position: | 515-877 | 
| Cow position: | chr6:596098-595731 (view UCSC Genome Browser custom track) | 
| Alignm length: | 369 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 22 | 
| Conread position: | 516-652 | 
| Cow position: | chr6:28100877-28100741 (view UCSC Genome Browser custom track) | 
| Alignm length: | 137 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 516-661 | 
| Cow position: | chr6:54164259-54164114 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 33, 133 | 
| Conread position: | 517-673 | 
| Cow position: | chr6:47150055-47150213 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 65, 42 | 
| Conread position: | 520-725 | 
| Cow position: | chr6:16230540-16230737 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 141, 101 | 
| Conread position: | 520-810 | 
| Cow position: | chr6:50423757-50423470 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 6.99949e-42 | 
| Alignm gaps (pig, cow): | 141, 161 | 
| Conread position: | 520-836 | 
| Cow position: | chr6:875682-875363 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 54 | 
| Conread position: | 520-836 | 
| Cow position: | chr6:12927766-12928075 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 141, 105 | 
| Conread position: | 520-836 | 
| Cow position: | chr6:62851636-62851319 (view UCSC Genome Browser custom track) | 
| Alignm length: | 321 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 9e-35 | 
| Alignm gaps (pig, cow): | 28, 17 | 
| Conread position: | 520-873 | 
| Cow position: | chr6:2546887-2547238 (view UCSC Genome Browser custom track) | 
| Alignm length: | 357 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 141, 51 | 
| Conread position: | 521-685 | 
| Cow position: | chr6:33918495-33918328 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 25, 72 | 
| Conread position: | 521-751 | 
| Cow position: | chr6:61268979-61269202 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 140, 116 | 
| Conread position: | 521-766 | 
| Cow position: | chr6:42693011-42693255 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 135, 21 | 
| Conread position: | 521-852 | 
| Cow position: | chr6:31535912-31535599 (view UCSC Genome Browser custom track) | 
| Alignm length: | 333 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 4e-28 | 
| Alignm gaps (pig, cow): | 294, 42 | 
| Conread position: | 521-861 | 
| Cow position: | chr6:24902492-24902164 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 261 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 286, 35 | 
| Conread position: | 522-647 | 
| Cow position: | chr6:44623129-44623004 (view UCSC Genome Browser custom track) | 
| Alignm length: | 126 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 522-854 | 
| Cow position: | chr6:323665-323328 (view UCSC Genome Browser custom track) | 
| Alignm length: | 340 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 138, 305 | 
| Conread position: | 523-826 | 
| Cow position: | chr6:41162055-41161745 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 27, 17 | 
| Conread position: | 524-646 | 
| Cow position: | chr6:51398079-51398197 (view UCSC Genome Browser custom track) | 
| Alignm length: | 123 | 
| Alignm identity: | 97 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 104, 0 | 
| Conread position: | 524-836 | 
| Cow position: | chr6:58761741-58762058 (view UCSC Genome Browser custom track) | 
| Alignm length: | 320 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 23, 5 | 
| Conread position: | 525-836 | 
| Cow position: | chr6:13605581-13605268 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 12 | 
| Conread position: | 525-836 | 
| Cow position: | chr6:13619823-13619510 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 12 | 
| Conread position: | 526-695 | 
| Cow position: | chr6:34608886-34608715 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 5e-40 | 
| Alignm gaps (pig, cow): | 39, 0 | 
| Conread position: | 526-805 | 
| Cow position: | chr6:39797930-39797649 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 135, 0 | 
| Conread position: | 526-810 | 
| Cow position: | chr6:1957122-1956836 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 8.40779e-45 | 
| Alignm gaps (pig, cow): | 21, 11 | 
| Conread position: | 526-810 | 
| Cow position: | chr6:38053538-38053824 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 21, 11 | 
| Conread position: | 526-822 | 
| Cow position: | chr6:15882025-15881729 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 21, 11 | 
| Conread position: | 526-828 | 
| Cow position: | chr6:45210943-45211247 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 21, 11 | 
| Conread position: | 526-836 | 
| Cow position: | chr6:19737326-19737638 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 21, 11 | 
| Conread position: | 526-836 | 
| Cow position: | chr6:27939576-27939888 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 21, 11 | 
| Conread position: | 526-836 | 
| Cow position: | chr6:40710174-40710486 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 21, 11 | 
| Conread position: | 526-836 | 
| Cow position: | chr6:55582348-55582036 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 21, 11 | 
| Conread position: | 526-836 | 
| Cow position: | chr6:62592911-62592598 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 135, 0 | 
| Conread position: | 526-852 | 
| Cow position: | chr6:67968982-67968641 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 85, 161 | 
| Conread position: | 526-863 | 
| Cow position: | chr6:35842310-35842637 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 132, 146 | 
| Conread position: | 527-652 | 
| Cow position: | chr6:7157104-7157229 (view UCSC Genome Browser custom track) | 
| Alignm length: | 126 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 527-867 | 
| Cow position: | chr6:43389715-43390058 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 20, 10 | 
| Conread position: | 528-766 | 
| Cow position: | chr6:37393062-37392825 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 156, 133 | 
| Conread position: | 528-808 | 
| Cow position: | chr6:55474901-55475174 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 132, 144 | 
| Conread position: | 529-689 | 
| Cow position: | chr6:21608149-21608304 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 8e-33 | 
| Alignm gaps (pig, cow): | 13, 0 | 
| Conread position: | 529-762 | 
| Cow position: | chr6:57574213-57574443 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 18, 34 | 
| Conread position: | 529-806 | 
| Cow position: | chr6:51071356-51071638 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 131, 158 | 
| Conread position: | 529-807 | 
| Cow position: | chr6:14706759-14706488 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 132, 7 | 
| Conread position: | 529-807 | 
| Cow position: | chr6:48655410-48655143 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 4e-28 | 
| Alignm gaps (pig, cow): | 133, 30 | 
| Conread position: | 529-808 | 
| Cow position: | chr6:48468454-48468733 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 87, 218 | 
| Conread position: | 529-835 | 
| Cow position: | chr6:12844962-12845267 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 99, 159 | 
| Conread position: | 529-836 | 
| Cow position: | chr6:47304980-47305296 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 132, 141 | 
| Conread position: | 529-851 | 
| Cow position: | chr6:15305241-15305552 (view UCSC Genome Browser custom track) | 
| Alignm length: | 325 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 132, 108 | 
| Conread position: | 529-851 | 
| Cow position: | chr6:63047229-63047550 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 133, 72 | 
| Conread position: | 529-852 | 
| Cow position: | chr6:10106348-10106019 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 110, 295 | 
| Conread position: | 529-854 | 
| Cow position: | chr6:8318513-8318189 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 125, 106 | 
| Conread position: | 529-868 | 
| Cow position: | chr6:35990574-35990245 (view UCSC Genome Browser custom track) | 
| Alignm length: | 349 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 7.9874e-44 | 
| Alignm gaps (pig, cow): | 101, 26 | 
| Conread position: | 530-813 | 
| Cow position: | chr6:24649508-24649787 (view UCSC Genome Browser custom track) | 
| Alignm length: | 287 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 199, 34 | 
| Conread position: | 530-828 | 
| Cow position: | chr6:10107303-10107602 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 7 | 
| Conread position: | 530-851 | 
| Cow position: | chr6:26925737-26925415 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 132, 158 | 
| Conread position: | 530-867 | 
| Cow position: | chr6:33897573-33897243 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 4e-38 | 
| Alignm gaps (pig, cow): | 17, 7 | 
| Conread position: | 530-868 | 
| Cow position: | chr6:452284-452626 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 17, 10 | 
| Conread position: | 531-860 | 
| Cow position: | chr6:456835-457159 (view UCSC Genome Browser custom track) | 
| Alignm length: | 339 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 80, 57 | 
| Conread position: | 532-654 | 
| Cow position: | chr6:67218977-67219099 (view UCSC Genome Browser custom track) | 
| Alignm length: | 123 | 
| Alignm identity: | 94 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 532-754 | 
| Cow position: | chr6:58605937-58606159 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 130, 148 | 
| Conread position: | 535-693 | 
| Cow position: | chr6:35260506-35260665 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 126, 0 | 
| Conread position: | 535-742 | 
| Cow position: | chr6:66532144-66531939 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 96, 161 | 
| Conread position: | 535-867 | 
| Cow position: | chr6:36299520-36299185 (view UCSC Genome Browser custom track) | 
| Alignm length: | 337 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 27, 13 | 
| Conread position: | 536-770 | 
| Cow position: | chr6:68663253-68663015 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 1.99993e-41 | 
| Alignm gaps (pig, cow): | 11, 160 | 
| Conread position: | 537-823 | 
| Cow position: | chr6:41033722-41034010 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 537-836 | 
| Cow position: | chr6:32054874-32054577 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 125, 100 | 
| Conread position: | 540-675 | 
| Cow position: | chr6:1228960-1228823 (view UCSC Genome Browser custom track) | 
| Alignm length: | 138 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 7, 0 | 
| Conread position: | 541-666 | 
| Cow position: | chr6:7538978-7539103 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 98 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 121, 13 | 
| Conread position: | 541-860 | 
| Cow position: | chr6:44078181-44078497 (view UCSC Genome Browser custom track) | 
| Alignm length: | 327 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 4e-38 | 
| Alignm gaps (pig, cow): | 122, 34 | 
| Conread position: | 543-754 | 
| Cow position: | chr6:22746321-22746532 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 18, 74 | 
| Conread position: | 544-688 | 
| Cow position: | chr6:37148489-37148633 (view UCSC Genome Browser custom track) | 
| Alignm length: | 145 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 544-808 | 
| Cow position: | chr6:54806890-54807155 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 8.40779e-45 | 
| Alignm gaps (pig, cow): | 118, 0 | 
| Conread position: | 544-810 | 
| Cow position: | chr6:17871065-17871333 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 117, 0 | 
| Conread position: | 544-854 | 
| Cow position: | chr6:28276329-28276639 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 8.40779e-45 | 
| Alignm gaps (pig, cow): | 117, 11 | 
| Conread position: | 544-854 | 
| Cow position: | chr6:36195881-36196186 (view UCSC Genome Browser custom track) | 
| Alignm length: | 313 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 118, 218 | 
| Conread position: | 544-860 | 
| Cow position: | chr6:28482681-28483000 (view UCSC Genome Browser custom track) | 
| Alignm length: | 320 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 544-860 | 
| Cow position: | chr6:54867186-54867494 (view UCSC Genome Browser custom track) | 
| Alignm length: | 321 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 117, 36 | 
| Conread position: | 544-861 | 
| Cow position: | chr6:59577016-59577334 (view UCSC Genome Browser custom track) | 
| Alignm length: | 321 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 110, 117 | 
| Conread position: | 545-669 | 
| Cow position: | chr6:16060104-16059979 (view UCSC Genome Browser custom track) | 
| Alignm length: | 126 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 116, 0 | 
| Conread position: | 545-805 | 
| Cow position: | chr6:26837716-26837460 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 4e-38 | 
| Alignm gaps (pig, cow): | 117, 68 | 
| Conread position: | 545-817 | 
| Cow position: | chr6:60152704-60152974 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 105, 117 | 
| Conread position: | 545-821 | 
| Cow position: | chr6:48794337-48794058 (view UCSC Genome Browser custom track) | 
| Alignm length: | 281 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 31, 276 | 
| Conread position: | 545-860 | 
| Cow position: | chr6:10176630-10176316 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 116, 92 | 
| Conread position: | 546-693 | 
| Cow position: | chr6:58589705-58589850 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 115, 91 | 
| Conread position: | 546-754 | 
| Cow position: | chr6:36603838-36604042 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 116, 152 | 
| Conread position: | 546-810 | 
| Cow position: | chr6:10536120-10535854 (view UCSC Genome Browser custom track) | 
| Alignm length: | 267 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 115, 0 | 
| Conread position: | 546-823 | 
| Cow position: | chr6:37217437-37217716 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 115, 0 | 
| Conread position: | 546-823 | 
| Cow position: | chr6:57796228-57795950 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 115, 275 | 
| Conread position: | 546-829 | 
| Cow position: | chr6:34111265-34110980 (view UCSC Genome Browser custom track) | 
| Alignm length: | 287 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 97, 90 | 
| Conread position: | 546-836 | 
| Cow position: | chr6:7216501-7216789 (view UCSC Genome Browser custom track) | 
| Alignm length: | 295 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 115, 146 | 
| Conread position: | 546-836 | 
| Cow position: | chr6:68871110-68870818 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 115, 0 | 
| Conread position: | 546-854 | 
| Cow position: | chr6:54980771-54981083 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 116, 275 | 
| Conread position: | 546-860 | 
| Cow position: | chr6:43404259-43404574 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 115, 285 | 
| Conread position: | 547-762 | 
| Cow position: | chr6:31151768-31151985 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 179, 115 | 
| Conread position: | 547-837 | 
| Cow position: | chr6:54140489-54140767 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 6.99949e-42 | 
| Alignm gaps (pig, cow): | 258, 12 | 
| Conread position: | 547-866 | 
| Cow position: | chr6:8526966-8527288 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 115, 0 | 
| Conread position: | 548-746 | 
| Cow position: | chr6:34924425-34924233 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 37, 0 | 
| Conread position: | 549-816 | 
| Cow position: | chr6:10459410-10459676 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 6.99949e-42 | 
| Alignm gaps (pig, cow): | 52, 0 | 
| Conread position: | 550-799 | 
| Cow position: | chr6:38776274-38776524 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 111, 0 | 
| Conread position: | 550-847 | 
| Cow position: | chr6:26728853-26728557 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 110, 131 | 
| Conread position: | 550-859 | 
| Cow position: | chr6:3936220-3936521 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 4e-37 | 
| Alignm gaps (pig, cow): | 112, 87 | 
| Conread position: | 551-694 | 
| Cow position: | chr6:62808833-62808976 (view UCSC Genome Browser custom track) | 
| Alignm length: | 145 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 9e-35 | 
| Alignm gaps (pig, cow): | 110, 140 | 
| Conread position: | 551-858 | 
| Cow position: | chr6:50446085-50445782 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 110, 131 | 
| Conread position: | 552-746 | 
| Cow position: | chr6:55387872-55388067 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 110, 53 | 
| Conread position: | 552-831 | 
| Cow position: | chr6:63716080-63716354 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 109, 129 | 
| Conread position: | 552-837 | 
| Cow position: | chr6:19681841-19681565 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 7.00649e-43 | 
| Alignm gaps (pig, cow): | 253, 106 | 
| Conread position: | 552-860 | 
| Cow position: | chr6:28148519-28148815 (view UCSC Genome Browser custom track) | 
| Alignm length: | 313 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 9, 119 | 
| Conread position: | 552-861 | 
| Cow position: | chr6:5672905-5673222 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 7.00649e-43 | 
| Alignm gaps (pig, cow): | 110, 55 | 
| Conread position: | 553-808 | 
| Cow position: | chr6:12116374-12116122 (view UCSC Genome Browser custom track) | 
| Alignm length: | 258 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 109, 27 | 
| Conread position: | 553-821 | 
| Cow position: | chr6:57685835-57686099 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 109, 199 | 
| Conread position: | 553-853 | 
| Cow position: | chr6:561296-561597 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 97, 84 | 
| Conread position: | 554-824 | 
| Cow position: | chr6:62578610-62578883 (view UCSC Genome Browser custom track) | 
| Alignm length: | 274 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 108, 0 | 
| Conread position: | 556-831 | 
| Cow position: | chr6:57597320-57597042 (view UCSC Genome Browser custom track) | 
| Alignm length: | 287 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 65, 144 | 
| Conread position: | 559-694 | 
| Cow position: | chr6:21302301-21302434 (view UCSC Genome Browser custom track) | 
| Alignm length: | 137 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 102, 78 | 
| Conread position: | 559-773 | 
| Cow position: | chr6:6239849-6240068 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 94, 0 | 
| Conread position: | 559-808 | 
| Cow position: | chr6:1538486-1538727 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 5.99994e-41 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 560-836 | 
| Cow position: | chr6:44535998-44535726 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 38, 96 | 
| Conread position: | 560-854 | 
| Cow position: | chr6:47625275-47624988 (view UCSC Genome Browser custom track) | 
| Alignm length: | 297 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 101, 25 | 
| Conread position: | 560-860 | 
| Cow position: | chr6:20231142-20230848 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 102, 140 | 
| Conread position: | 560-861 | 
| Cow position: | chr6:60859620-60859318 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 5.99994e-41 | 
| Alignm gaps (pig, cow): | 101, 77 | 
| Conread position: | 561-782 | 
| Cow position: | chr6:54841219-54840993 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 9e-35 | 
| Alignm gaps (pig, cow): | 56, 174 | 
| Conread position: | 562-746 | 
| Cow position: | chr6:32461881-32461696 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 562-761 | 
| Cow position: | chr6:13345228-13345028 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 99, 0 | 
| Conread position: | 562-802 | 
| Cow position: | chr6:6117871-6117628 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 77, 207 | 
| Conread position: | 562-820 | 
| Cow position: | chr6:30285374-30285630 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 100, 115 | 
| Conread position: | 563-680 | 
| Cow position: | chr6:37468428-37468309 (view UCSC Genome Browser custom track) | 
| Alignm length: | 120 | 
| Alignm identity: | 94 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 99, 0 | 
| Conread position: | 563-853 | 
| Cow position: | chr6:12500543-12500834 (view UCSC Genome Browser custom track) | 
| Alignm length: | 296 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 92, 220 | 
| Conread position: | 563-860 | 
| Cow position: | chr6:12337671-12337969 (view UCSC Genome Browser custom track) | 
| Alignm length: | 304 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 118 | 
| Conread position: | 564-684 | 
| Cow position: | chr6:50042793-50042914 (view UCSC Genome Browser custom track) | 
| Alignm length: | 122 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 97, 0 | 
| Conread position: | 564-822 | 
| Cow position: | chr6:52308021-52308287 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 86, 134 | 
| Conread position: | 564-860 | 
| Cow position: | chr6:43014494-43014196 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 9e-35 | 
| Alignm gaps (pig, cow): | 97, 0 | 
| Conread position: | 566-860 | 
| Cow position: | chr6:46557747-46558034 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 96, 107 | 
| Conread position: | 569-747 | 
| Cow position: | chr6:1104356-1104178 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 94, 49 | 
| Conread position: | 569-805 | 
| Cow position: | chr6:61452203-61452436 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 47, 59 | 
| Conread position: | 570-801 | 
| Cow position: | chr6:68127147-68127379 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 90, 0 | 
| Conread position: | 570-827 | 
| Cow position: | chr6:611261-611507 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 179, 8 | 
| Conread position: | 570-862 | 
| Cow position: | chr6:21587728-21587436 (view UCSC Genome Browser custom track) | 
| Alignm length: | 295 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 92, 280 | 
| Conread position: | 573-695 | 
| Cow position: | chr6:7010413-7010292 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 87, 64 | 
| Conread position: | 573-722 | 
| Cow position: | chr6:67044667-67044816 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 88, 34 | 
| Conread position: | 573-738 | 
| Cow position: | chr6:50527766-50527600 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 88, 0 | 
| Conread position: | 573-746 | 
| Cow position: | chr6:56596971-56597145 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 4e-28 | 
| Alignm gaps (pig, cow): | 88, 0 | 
| Conread position: | 573-792 | 
| Cow position: | chr6:60344055-60344270 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 4e-28 | 
| Alignm gaps (pig, cow): | 36, 142 | 
| Conread position: | 573-813 | 
| Cow position: | chr6:60467724-60467956 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 88, 108 | 
| Conread position: | 573-852 | 
| Cow position: | chr6:7312288-7312568 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 8e-33 | 
| Alignm gaps (pig, cow): | 89, 48 | 
| Conread position: | 573-860 | 
| Cow position: | chr6:21300825-21300536 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 5e-40 | 
| Alignm gaps (pig, cow): | 89, 119 | 
| Conread position: | 574-798 | 
| Cow position: | chr6:45775700-45775475 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 88, 108 | 
| Conread position: | 574-853 | 
| Cow position: | chr6:55956407-55956135 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 229, 93 | 
| Conread position: | 574-860 | 
| Cow position: | chr6:31525749-31526023 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 88, 63 | 
| Conread position: | 575-860 | 
| Cow position: | chr6:56926895-56927182 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 86, 117 | 
| Conread position: | 576-735 | 
| Cow position: | chr6:41214386-41214548 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 85, 0 | 
| Conread position: | 576-808 | 
| Cow position: | chr6:5329854-5330076 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 85, 96 | 
| Conread position: | 577-801 | 
| Cow position: | chr6:53401071-53401285 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 82, 0 | 
| Conread position: | 577-869 | 
| Cow position: | chr6:60239681-60239400 (view UCSC Genome Browser custom track) | 
| Alignm length: | 295 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 11, 16 | 
| Conread position: | 579-860 | 
| Cow position: | chr6:63272915-63272632 (view UCSC Genome Browser custom track) | 
| Alignm length: | 290 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 5e-40 | 
| Alignm gaps (pig, cow): | 79, 106 | 
| Conread position: | 580-754 | 
| Cow position: | chr6:23545763-23545588 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 81, 0 | 
| Conread position: | 580-762 | 
| Cow position: | chr6:19508728-19508545 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 68, 83 | 
| Conread position: | 580-853 | 
| Cow position: | chr6:58172891-58173156 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 81, 57 | 
| Conread position: | 580-860 | 
| Cow position: | chr6:55577869-55578146 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 82, 112 | 
| Conread position: | 581-854 | 
| Cow position: | chr6:12389803-12390073 (view UCSC Genome Browser custom track) | 
| Alignm length: | 275 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 80, 91 | 
| Conread position: | 581-860 | 
| Cow position: | chr6:60057961-60057674 (view UCSC Genome Browser custom track) | 
| Alignm length: | 295 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 9e-35 | 
| Alignm gaps (pig, cow): | 85, 101 | 
| Conread position: | 583-805 | 
| Cow position: | chr6:15882847-15883070 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 84, 181 | 
| Conread position: | 583-830 | 
| Cow position: | chr6:61489053-61489293 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 78, 42 | 
| Conread position: | 583-854 | 
| Cow position: | chr6:40264487-40264226 (view UCSC Genome Browser custom track) | 
| Alignm length: | 274 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 83, 25 | 
| Conread position: | 584-838 | 
| Cow position: | chr6:34235728-34235476 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 14, 170 | 
| Conread position: | 585-756 | 
| Cow position: | chr6:6136597-6136770 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 76, 108 | 
| Conread position: | 585-767 | 
| Cow position: | chr6:32497659-32497840 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 77, 51 | 
| Conread position: | 585-770 | 
| Cow position: | chr6:12913778-12913592 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 7e-32 | 
| Alignm gaps (pig, cow): | 76, 0 | 
| Conread position: | 585-825 | 
| Cow position: | chr6:68685185-68685424 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 15, 76 | 
| Conread position: | 585-853 | 
| Cow position: | chr6:47519759-47520023 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 77, 96 | 
| Conread position: | 585-859 | 
| Cow position: | chr6:54369188-54368919 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 75, 52 | 
| Conread position: | 585-860 | 
| Cow position: | chr6:34196440-34196170 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 77, 166 | 
| Conread position: | 585-860 | 
| Cow position: | chr6:38257447-38257170 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 76, 0 | 
| Conread position: | 585-867 | 
| Cow position: | chr6:47387204-47387491 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 76, 238 | 
| Conread position: | 586-751 | 
| Cow position: | chr6:7131162-7130996 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 7e-32 | 
| Alignm gaps (pig, cow): | 76, 0 | 
| Conread position: | 586-754 | 
| Cow position: | chr6:47640091-47639922 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 76, 93 | 
| Conread position: | 587-781 | 
| Cow position: | chr6:20951669-20951864 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 73, 0 | 
| Conread position: | 587-854 | 
| Cow position: | chr6:26696897-26696629 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 75, 95 | 
| Conread position: | 588-821 | 
| Cow position: | chr6:19330043-19329810 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 74, 49 | 
| Conread position: | 588-860 | 
| Cow position: | chr6:62479454-62479183 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 74, 94 | 
| Conread position: | 590-745 | 
| Cow position: | chr6:6201161-6201310 (view UCSC Genome Browser custom track) | 
| Alignm length: | 157 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 72, 47 | 
| Conread position: | 591-832 | 
| Cow position: | chr6:41265273-41265522 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 69, 49 | 
| Conread position: | 591-854 | 
| Cow position: | chr6:69500044-69500298 (view UCSC Genome Browser custom track) | 
| Alignm length: | 267 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 70, 132 | 
| Conread position: | 592-807 | 
| Cow position: | chr6:51387481-51387693 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 70, 58 | 
| Conread position: | 592-836 | 
| Cow position: | chr6:41798590-41798344 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 594-828 | 
| Cow position: | chr6:61629987-61629750 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 67, 180 | 
| Conread position: | 594-851 | 
| Cow position: | chr6:32778812-32778553 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 68, 0 | 
| Conread position: | 595-693 | 
| Cow position: | chr6:25072452-25072551 (view UCSC Genome Browser custom track) | 
| Alignm length: | 100 | 
| Alignm identity: | 83 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 66, 0 | 
| Conread position: | 595-810 | 
| Cow position: | chr6:53960292-53960076 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 67, 10 | 
| Conread position: | 595-860 | 
| Cow position: | chr6:7694634-7694368 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 40, 60 | 
| Conread position: | 596-797 | 
| Cow position: | chr6:32024618-32024420 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 7e-32 | 
| Alignm gaps (pig, cow): | 66, 19 | 
| Conread position: | 596-856 | 
| Cow position: | chr6:21534778-21535032 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 66, 158 | 
| Conread position: | 597-862 | 
| Cow position: | chr6:22332678-22332411 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 64, 224 | 
| Conread position: | 598-829 | 
| Cow position: | chr6:13597171-13596938 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 64, 0 | 
| Conread position: | 600-769 | 
| Cow position: | chr6:3591849-3592016 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 62, 37 | 
| Conread position: | 600-777 | 
| Cow position: | chr6:60274500-60274324 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 8e-34 | 
| Alignm gaps (pig, cow): | 62, 82 | 
| Conread position: | 600-836 | 
| Cow position: | chr6:1273634-1273402 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 61, 183 | 
| Conread position: | 600-836 | 
| Cow position: | chr6:44705618-44705380 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 4e-28 | 
| Alignm gaps (pig, cow): | 62, 0 | 
| Conread position: | 600-867 | 
| Cow position: | chr6:32298745-32298476 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 62, 159 | 
| Conread position: | 601-836 | 
| Cow position: | chr6:25348046-25347809 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 601-854 | 
| Cow position: | chr6:2833151-2832900 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 60, 161 | 
| Conread position: | 601-866 | 
| Cow position: | chr6:54899827-54900095 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 602-807 | 
| Cow position: | chr6:47150504-47150706 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 7e-32 | 
| Alignm gaps (pig, cow): | 60, 160 | 
| Conread position: | 603-831 | 
| Cow position: | chr6:52562442-52562216 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 180, 47 | 
| Conread position: | 604-770 | 
| Cow position: | chr6:1331699-1331532 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 58, 0 | 
| Conread position: | 604-823 | 
| Cow position: | chr6:62418803-62418582 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 58, 0 | 
| Conread position: | 604-830 | 
| Cow position: | chr6:57149228-57149001 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 61, 91 | 
| Conread position: | 604-861 | 
| Cow position: | chr6:42961640-42961381 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 8e-34 | 
| Alignm gaps (pig, cow): | 58, 246 | 
| Conread position: | 604-861 | 
| Cow position: | chr6:50746704-50746967 (view UCSC Genome Browser custom track) | 
| Alignm length: | 267 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 46, 119 | 
| Conread position: | 604-861 | 
| Cow position: | chr6:51471193-51471452 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 41, 33 | 
| Conread position: | 604-861 | 
| Cow position: | chr6:54365596-54365350 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 7e-32 | 
| Alignm gaps (pig, cow): | 58, 94 | 
| Conread position: | 604-866 | 
| Cow position: | chr6:60473861-60474116 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 57, 164 | 
| Conread position: | 604-869 | 
| Cow position: | chr6:13603194-13603456 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 57, 142 | 
| Conread position: | 605-858 | 
| Cow position: | chr6:48281723-48281976 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 57, 163 | 
| Conread position: | 605-867 | 
| Cow position: | chr6:43896944-43896679 (view UCSC Genome Browser custom track) | 
| Alignm length: | 267 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 57, 87 | 
| Conread position: | 608-801 | 
| Cow position: | chr6:53799149-53798959 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 54, 102 | 
| Conread position: | 608-851 | 
| Cow position: | chr6:59688571-59688326 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 53, 73 | 
| Conread position: | 608-862 | 
| Cow position: | chr6:35471795-35471538 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 54, 92 | 
| Conread position: | 609-801 | 
| Cow position: | chr6:54735472-54735663 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 52, 88 | 
| Conread position: | 609-867 | 
| Cow position: | chr6:11455923-11455662 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 53, 0 | 
| Conread position: | 610-836 | 
| Cow position: | chr6:5280226-5280002 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 52, 6 | 
| Conread position: | 610-837 | 
| Cow position: | chr6:59277207-59276977 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 52, 87 | 
| Conread position: | 612-807 | 
| Cow position: | chr6:35769747-35769555 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 52, 150 | 
| Conread position: | 612-823 | 
| Cow position: | chr6:42731937-42732149 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 50, 209 | 
| Conread position: | 612-823 | 
| Cow position: | chr6:43430128-43429916 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 50, 209 | 
| Conread position: | 612-860 | 
| Cow position: | chr6:40713763-40713520 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 4e-38 | 
| Alignm gaps (pig, cow): | 50, 14 | 
| Conread position: | 613-770 | 
| Cow position: | chr6:33579686-33579528 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 49, 0 | 
| Conread position: | 613-860 | 
| Cow position: | chr6:61515461-61515211 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 49, 69 | 
| Conread position: | 614-823 | 
| Cow position: | chr6:64131527-64131738 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 48, 0 | 
| Conread position: | 615-836 | 
| Cow position: | chr6:11772171-11771951 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 47, 13 | 
| Conread position: | 615-860 | 
| Cow position: | chr6:54293849-54294088 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 8e-34 | 
| Alignm gaps (pig, cow): | 47, 139 | 
| Conread position: | 615-867 | 
| Cow position: | chr6:2453847-2454103 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 47, 0 | 
| Conread position: | 616-823 | 
| Cow position: | chr6:55289632-55289841 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 46, 0 | 
| Conread position: | 620-835 | 
| Cow position: | chr6:22788198-22788415 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 42, 71 | 
| Conread position: | 620-836 | 
| Cow position: | chr6:52462769-52462987 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 42, 0 | 
| Conread position: | 620-860 | 
| Cow position: | chr6:3952268-3952498 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 42, 70 | 
| Conread position: | 620-860 | 
| Cow position: | chr6:30016124-30015882 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 42, 201 | 
| Conread position: | 620-860 | 
| Cow position: | chr6:46628235-46627990 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 41, 61 | 
| Conread position: | 621-836 | 
| Cow position: | chr6:57857624-57857839 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 40, 135 | 
| Conread position: | 622-860 | 
| Cow position: | chr6:64449137-64449372 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 40, 86 | 
| Conread position: | 623-823 | 
| Cow position: | chr6:11097702-11097904 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 39, 0 | 
| Conread position: | 623-835 | 
| Cow position: | chr6:17068074-17067863 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 20, 60 | 
| Conread position: | 623-867 | 
| Cow position: | chr6:65839128-65838881 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 39, 0 | 
| Conread position: | 623-884 | 
| Cow position: | chr6:21254788-21255053 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 39, 0 | 
| Conread position: | 624-836 | 
| Cow position: | chr6:21230716-21230927 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 38, 13 | 
| Conread position: | 625-808 | 
| Cow position: | chr6:11829914-11830100 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 37, 0 | 
| Conread position: | 625-810 | 
| Cow position: | chr6:46637930-46638117 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 37, 0 | 
| Conread position: | 628-807 | 
| Cow position: | chr6:3719257-3719075 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 8e-33 | 
| Alignm gaps (pig, cow): | 34, 0 | 
| Conread position: | 628-810 | 
| Cow position: | chr6:23849940-23849756 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 33, 0 | 
| Conread position: | 628-836 | 
| Cow position: | chr6:15776673-15776883 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 34, 0 | 
| Conread position: | 628-854 | 
| Cow position: | chr6:53710867-53711089 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 22, 56 | 
| Conread position: | 628-861 | 
| Cow position: | chr6:65676008-65676234 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 7e-32 | 
| Alignm gaps (pig, cow): | 34, 133 | 
| Conread position: | 630-860 | 
| Cow position: | chr6:38207741-38207511 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 18, 31 | 
| Conread position: | 631-810 | 
| Cow position: | chr6:28642980-28643161 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 31, 0 | 
| Conread position: | 631-810 | 
| Cow position: | chr6:28674972-28674791 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 31, 0 | 
| Conread position: | 631-837 | 
| Cow position: | chr6:54132573-54132774 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 31, 11 | 
| Conread position: | 631-838 | 
| Cow position: | chr6:20329775-20329983 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 31, 188 | 
| Conread position: | 631-860 | 
| Cow position: | chr6:15242590-15242812 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 176, 36 | 
| Conread position: | 631-867 | 
| Cow position: | chr6:3937406-3937645 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 31, 0 | 
| Conread position: | 632-836 | 
| Cow position: | chr6:1002479-1002277 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 30, 39 | 
| Conread position: | 632-854 | 
| Cow position: | chr6:38853903-38853681 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 8e-33 | 
| Alignm gaps (pig, cow): | 33, 172 | 
| Conread position: | 633-836 | 
| Cow position: | chr6:52177141-52176937 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 29, 7 | 
| Conread position: | 634-853 | 
| Cow position: | chr6:54991235-54991030 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 27, 48 | 
| Conread position: | 635-823 | 
| Cow position: | chr6:54947124-54947313 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 27, 11 | 
| Conread position: | 635-830 | 
| Cow position: | chr6:14886919-14886722 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 27, 0 | 
| Conread position: | 637-852 | 
| Cow position: | chr6:61113510-61113729 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 25, 0 | 
| Conread position: | 637-854 | 
| Cow position: | chr6:3621873-3622092 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 25, 45 | 
| Conread position: | 637-854 | 
| Cow position: | chr6:26915090-26915304 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 25, 116 | 
| Conread position: | 637-861 | 
| Cow position: | chr6:7103475-7103249 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 50, 30 | 
| Conread position: | 638-852 | 
| Cow position: | chr6:20098203-20097992 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 4e-28 | 
| Alignm gaps (pig, cow): | 24, 124 | 
| Conread position: | 640-851 | 
| Cow position: | chr6:13040215-13040428 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 22, 61 | 
| Conread position: | 640-851 | 
| Cow position: | chr6:61978418-61978203 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 21, 157 | 
| Conread position: | 640-866 | 
| Cow position: | chr6:52022089-52021860 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 22, 0 | 
| Conread position: | 640-867 | 
| Cow position: | chr6:6808609-6808378 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 22, 0 | 
| Conread position: | 641-836 | 
| Cow position: | chr6:41622947-41622750 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 21, 0 | 
| Conread position: | 643-853 | 
| Cow position: | chr6:3929088-3929291 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 6, 18 | 
| Conread position: | 644-851 | 
| Cow position: | chr6:54885146-54884939 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 17, 125 | 
| Conread position: | 644-860 | 
| Cow position: | chr6:39994692-39994481 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 130, 16 | 
| Conread position: | 644-860 | 
| Cow position: | chr6:45160523-45160314 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 5, 17 | 
| Conread position: | 646-867 | 
| Cow position: | chr6:27854289-27854513 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 16, 0 | 
| Conread position: | 648-847 | 
| Cow position: | chr6:130393-130194 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 14, 34 | 
| Conread position: | 648-861 | 
| Cow position: | chr6:20605707-20605917 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 13, 0 | 
| Conread position: | 649-781 | 
| Cow position: | chr6:16288646-16288516 (view UCSC Genome Browser custom track) | 
| Alignm length: | 134 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 13, 33 | 
| Conread position: | 649-781 | 
| Cow position: | chr6:31048734-31048603 (view UCSC Genome Browser custom track) | 
| Alignm length: | 134 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 13, 113 | 
| Conread position: | 649-849 | 
| Cow position: | chr6:68049208-68049406 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 13, 33 | 
| Conread position: | 649-854 | 
| Cow position: | chr6:60350527-60350321 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 13, 155 | 
| Conread position: | 649-860 | 
| Cow position: | chr6:67950731-67950932 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 13, 105 | 
| Conread position: | 649-861 | 
| Cow position: | chr6:14201470-14201681 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 13, 121 | 
| Conread position: | 649-870 | 
| Cow position: | chr6:44194773-44194554 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 7e-32 | 
| Alignm gaps (pig, cow): | 13, 102 | 
| Conread position: | 650-795 | 
| Cow position: | chr6:65846674-65846527 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 12, 0 | 
| Conread position: | 650-808 | 
| Cow position: | chr6:67304575-67304733 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 12, 32 | 
| Conread position: | 650-837 | 
| Cow position: | chr6:14949706-14949521 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 160, 11 | 
| Conread position: | 650-851 | 
| Cow position: | chr6:15301044-15300847 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 12, 105 | 
| Conread position: | 650-853 | 
| Cow position: | chr6:53460798-53460599 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 11, 32 | 
| Conread position: | 650-854 | 
| Cow position: | chr6:51581486-51581279 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 650-860 | 
| Cow position: | chr6:37148972-37149168 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 165, 41 | 
| Conread position: | 650-870 | 
| Cow position: | chr6:30826261-30826039 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 12, 32 | 
| Conread position: | 651-851 | 
| Cow position: | chr6:53651815-53652013 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 35, 110 | 
| Conread position: | 651-860 | 
| Cow position: | chr6:7190343-7190139 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 168, 9 | 
| Conread position: | 652-830 | 
| Cow position: | chr6:51398578-51398752 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 163, 8 | 
| Conread position: | 652-852 | 
| Cow position: | chr6:21542095-21542292 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 10, 107 | 
| Conread position: | 652-861 | 
| Cow position: | chr6:55282513-55282306 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 5, 9 | 
| Conread position: | 653-836 | 
| Cow position: | chr6:59302048-59301864 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 162, 0 | 
| Conread position: | 653-859 | 
| Cow position: | chr6:388947-389150 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 10, 65 | 
| Conread position: | 653-860 | 
| Cow position: | chr6:38614602-38614796 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 7, 0 | 
| Conread position: | 654-837 | 
| Cow position: | chr6:23248186-23248002 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 9, 166 | 
| Conread position: | 657-810 | 
| Cow position: | chr6:21184736-21184887 (view UCSC Genome Browser custom track) | 
| Alignm length: | 155 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 5, 94 | 
| Conread position: | 659-851 | 
| Cow position: | chr6:59015779-59015587 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 28, 130 | 
| Conread position: | 660-851 | 
| Cow position: | chr6:6460326-6460514 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 155, 21 | 
| Conread position: | 660-854 | 
| Cow position: | chr6:8965874-8966065 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 4e-28 | 
| Alignm gaps (pig, cow): | 31, 0 | 
| Conread position: | 660-854 | 
| Cow position: | chr6:21110753-21110939 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 27, 102 | 
| Conread position: | 660-859 | 
| Cow position: | chr6:48344112-48344311 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 41, 35 | 
| Conread position: | 660-860 | 
| Cow position: | chr6:32420919-32421120 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 143, 159 | 
| Conread position: | 660-860 | 
| Cow position: | chr6:60442203-60442399 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 142, 21 | 
| Conread position: | 660-861 | 
| Cow position: | chr6:54430603-54430806 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 148, 197 | 
| Conread position: | 661-864 | 
| Cow position: | chr6:17997530-17997329 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 154, 100 | 
| Conread position: | 661-869 | 
| Cow position: | chr6:66453586-66453791 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 155, 72 | 
| Conread position: | 662-861 | 
| Cow position: | chr6:59620455-59620649 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 145, 104 | 
| Conread position: | 664-869 | 
| Cow position: | chr6:24515405-24515205 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 145, 97 | 
| Conread position: | 665-860 | 
| Cow position: | chr6:53139140-53138941 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 138, 155 | 
| Conread position: | 668-852 | 
| Cow position: | chr6:7989621-7989437 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 135, 31 | 
| Conread position: | 669-860 | 
| Cow position: | chr6:61137158-61137354 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 34, 12 | 
| Conread position: | 670-859 | 
| Cow position: | chr6:38641292-38641473 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 86, 0 | 
| Conread position: | 670-860 | 
| Cow position: | chr6:6098488-6098303 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 145, 90 | 
| Conread position: | 672-837 | 
| Cow position: | chr6:51463820-51463654 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 143, 131 | 
| Conread position: | 673-860 | 
| Cow position: | chr6:66131105-66131286 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 130, 72 | 
| Conread position: | 712-860 | 
| Cow position: | chr6:44984162-44984310 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 103, 52 | 
| Conread position: | 714-860 | 
| Cow position: | chr6:12543095-12542953 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 104, 47 | 
Show alignments to all cow chromosomes.
