Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-ruio09_c16.5
        

               Conread position:
               317-813
               

               Cow position:
               chr8:44703506-44703995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               499
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               278, 335
               

               Conread position:
               377-695
               

               Cow position:
               chr8:4079945-4079623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               9, 18
               

               Conread position:
               380-861
               

               Cow position:
               chr8:1252435-1252905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               486
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 24
               

               Conread position:
               385-867
               

               Cow position:
               chr8:58229678-58230163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               489
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 28
               

               Conread position:
               395-806
               

               Cow position:
               chr8:8902483-8902067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 50
               

               Conread position:
               395-806
               

               Cow position:
               chr8:42649715-42649297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               287
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               12, 222
               

               Conread position:
               395-836
               

               Cow position:
               chr8:12247279-12246834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 144
               

               Conread position:
               396-662
               

               Cow position:
               chr8:26922091-26922376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               400-661
               

               Cow position:
               chr8:13315116-13314844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               95, 23
               

               Conread position:
               404-649
               

               Cow position:
               chr8:42794852-42794607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 137
               

               Conread position:
               405-744
               

               Cow position:
               chr8:25387459-25387802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 57
               

               Conread position:
               410-830
               

               Cow position:
               chr8:33584642-33585083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 50
               

               Conread position:
               413-754
               

               Cow position:
               chr8:11740230-11739900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               233
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               113, 9
               

               Conread position:
               413-804
               

               Cow position:
               chr8:29262277-29262682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 59
               

               Conread position:
               414-867
               

               Cow position:
               chr8:24724755-24725211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               247, 0
               

               Conread position:
               415-554
               

               Cow position:
               chr8:46615284-46615423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               415-595
               

               Cow position:
               chr8:5243194-5243008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               110, 34
               

               Conread position:
               415-616
               

               Cow position:
               chr8:1146657-1146457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               415-619
               

               Cow position:
               chr8:11782036-11782245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               114, 156
               

               Conread position:
               415-635
               

               Cow position:
               chr8:19616077-19616302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               415-640
               

               Cow position:
               chr8:4274173-4274379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               415-649
               

               Cow position:
               chr8:53003952-53003715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               126, 141
               

               Conread position:
               415-650
               

               Cow position:
               chr8:17670270-17670038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               170
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               213, 47
               

               Conread position:
               415-661
               

               Cow position:
               chr8:22518490-22518730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               73, 122
               

               Conread position:
               415-661
               

               Cow position:
               chr8:30483101-30482853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               181
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               229, 0
               

               Conread position:
               415-663
               

               Cow position:
               chr8:17180572-17180328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               415-666
               

               Cow position:
               chr8:55198053-55198301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               231, 0
               

               Conread position:
               415-668
               

               Cow position:
               chr8:36308850-36308589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               60, 241
               

               Conread position:
               415-669
               

               Cow position:
               chr8:7620738-7620484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               187
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               246, 125
               

               Conread position:
               415-682
               

               Cow position:
               chr8:57514-57785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               111, 167
               

               Conread position:
               415-736
               

               Cow position:
               chr8:9985104-9985425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 36
               

               Conread position:
               415-739
               

               Cow position:
               chr8:18289641-18289326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               221
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               118, 211
               

               Conread position:
               415-742
               

               Cow position:
               chr8:18057245-18057573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               250
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               220, 98
               

               Conread position:
               415-742
               

               Cow position:
               chr8:49529630-49529290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               94, 23
               

               Conread position:
               415-746
               

               Cow position:
               chr8:1385800-1386147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               239
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               126, 16
               

               Conread position:
               415-766
               

               Cow position:
               chr8:39048128-39047756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               244
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               114, 58
               

               Conread position:
               415-805
               

               Cow position:
               chr8:40115595-40115205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 122
               

               Conread position:
               415-822
               

               Cow position:
               chr8:38862187-38861784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 284
               

               Conread position:
               415-831
               

               Cow position:
               chr8:8016108-8015700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 68
               

               Conread position:
               415-853
               

               Cow position:
               chr8:4924071-4924512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 390
               

               Conread position:
               415-853
               

               Cow position:
               chr8:46235210-46235647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 238
               

               Conread position:
               415-854
               

               Cow position:
               chr8:35988988-35989446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               415-854
               

               Cow position:
               chr8:43028156-43027711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 207
               

               Conread position:
               415-860
               

               Cow position:
               chr8:36398404-36397965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               246, 8
               

               Conread position:
               415-860
               

               Cow position:
               chr8:51446197-51445751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               244, 64
               

               Conread position:
               415-863
               

               Cow position:
               chr8:54195043-54195491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 156
               

               Conread position:
               415-867
               

               Cow position:
               chr8:9739485-9739940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 122
               

               Conread position:
               415-868
               

               Cow position:
               chr8:47484428-47483960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               475
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 354
               

               Conread position:
               415-869
               

               Cow position:
               chr8:3704129-3704583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 113
               

               Conread position:
               415-869
               

               Cow position:
               chr8:22632873-22633323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 12
               

               Conread position:
               415-877
               

               Cow position:
               chr8:28880362-28880819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               286, 247
               

               Conread position:
               416-669
               

               Cow position:
               chr8:41712375-41712120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               108, 33
               

               Conread position:
               416-757
               

               Cow position:
               chr8:37271106-37271454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               62, 34
               

               Conread position:
               416-777
               

               Cow position:
               chr8:22227917-22227541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               264
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               51, 261
               

               Conread position:
               416-843
               

               Cow position:
               chr8:58417185-58417635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 17
               

               Conread position:
               417-754
               

               Cow position:
               chr8:5041194-5041534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               41, 46
               

               Conread position:
               417-774
               

               Cow position:
               chr8:53430751-53431110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 345
               

               Conread position:
               418-618
               

               Cow position:
               chr8:51338688-51338893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               57, 94
               

               Conread position:
               418-626
               

               Cow position:
               chr8:55359845-55360051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               163
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               418-654
               

               Cow position:
               chr8:21151452-21151212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               185
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               108, 98
               

               Conread position:
               418-718
               

               Cow position:
               chr8:54210111-54210415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 126
               

               Conread position:
               418-719
               

               Cow position:
               chr8:49287986-49287690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 13
               

               Conread position:
               418-746
               

               Cow position:
               chr8:18551779-18551448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               215
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               105, 82
               

               Conread position:
               418-751
               

               Cow position:
               chr8:5877036-5877371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 272
               

               Conread position:
               418-754
               

               Cow position:
               chr8:16957158-16957500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 56
               

               Conread position:
               418-781
               

               Cow position:
               chr8:50432699-50432346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               253
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               70, 9
               

               Conread position:
               418-805
               

               Cow position:
               chr8:12094307-12094692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               262
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               111, 48
               

               Conread position:
               418-859
               

               Cow position:
               chr8:19996209-19995781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               301, 13
               

               Conread position:
               419-546
               

               Cow position:
               chr8:32132397-32132270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               419-595
               

               Cow position:
               chr8:32855267-32855088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               95, 121
               

               Conread position:
               419-626
               

               Cow position:
               chr8:1550222-1550019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               54, 116
               

               Conread position:
               419-626
               

               Cow position:
               chr8:5702926-5702721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               162
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               419-632
               

               Cow position:
               chr8:36921361-36921580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               419-640
               

               Cow position:
               chr8:38711034-38711260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               175
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               123, 220
               

               Conread position:
               419-649
               

               Cow position:
               chr8:8224391-8224165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               139, 108
               

               Conread position:
               419-666
               

               Cow position:
               chr8:19283942-19284188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               419-692
               

               Cow position:
               chr8:20006333-20006053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               44, 34
               

               Conread position:
               419-694
               

               Cow position:
               chr8:17958064-17957787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               113, 143
               

               Conread position:
               419-694
               

               Cow position:
               chr8:51470635-51470355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               66, 49
               

               Conread position:
               419-700
               

               Cow position:
               chr8:24671412-24671127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               104, 8
               

               Conread position:
               419-724
               

               Cow position:
               chr8:33053525-33053829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               200
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               108, 40
               

               Conread position:
               419-728
               

               Cow position:
               chr8:29271720-29271406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               101, 77
               

               Conread position:
               419-738
               

               Cow position:
               chr8:43227495-43227829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 95
               

               Conread position:
               419-741
               

               Cow position:
               chr8:29439647-29439330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               242, 105
               

               Conread position:
               419-742
               

               Cow position:
               chr8:27658055-27658383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               217
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               43, 107
               

               Conread position:
               419-746
               

               Cow position:
               chr8:19317957-19317626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               224
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               104, 156
               

               Conread position:
               419-750
               

               Cow position:
               chr8:24904811-24905152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 47
               

               Conread position:
               419-754
               

               Cow position:
               chr8:12539089-12538748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               228
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               57, 88
               

               Conread position:
               419-754
               

               Cow position:
               chr8:19425573-19425232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               419-754
               

               Cow position:
               chr8:37268668-37269013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               419-754
               

               Cow position:
               chr8:41743156-41743490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               220
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               114, 85
               

               Conread position:
               419-757
               

               Cow position:
               chr8:29370029-29369687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               232
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               93, 181
               

               Conread position:
               419-758
               

               Cow position:
               chr8:52619801-52619458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               39, 44
               

               Conread position:
               419-759
               

               Cow position:
               chr8:18395243-18395584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               245
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               104, 24
               

               Conread position:
               419-759
               

               Cow position:
               chr8:19370148-19370494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               233
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               100, 26
               

               Conread position:
               419-763
               

               Cow position:
               chr8:39807422-39807088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               242, 150
               

               Conread position:
               419-766
               

               Cow position:
               chr8:30031323-30030973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               31, 140
               

               Conread position:
               419-767
               

               Cow position:
               chr8:8531606-8531257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               239, 70
               

               Conread position:
               419-781
               

               Cow position:
               chr8:20634701-20634334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               245
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               101, 286
               

               Conread position:
               419-801
               

               Cow position:
               chr8:25772676-25772294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 49
               

               Conread position:
               419-804
               

               Cow position:
               chr8:21732080-21732469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               275
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               113, 244
               

               Conread position:
               419-823
               

               Cow position:
               chr8:6077017-6076631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 64
               

               Conread position:
               419-831
               

               Cow position:
               chr8:38054413-38054825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 201
               

               Conread position:
               419-836
               

               Cow position:
               chr8:36632483-36632068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 122
               

               Conread position:
               419-837
               

               Cow position:
               chr8:28987236-28987632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               297
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               98, 43
               

               Conread position:
               419-853
               

               Cow position:
               chr8:21195662-21196086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               243, 121
               

               Conread position:
               419-854
               

               Cow position:
               chr8:53214790-53214381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               396, 196
               

               Conread position:
               419-854
               

               Cow position:
               chr8:59250246-59250677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               326, 152
               

               Conread position:
               419-860
               

               Cow position:
               chr8:8514110-8513669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               242, 118
               

               Conread position:
               419-860
               

               Cow position:
               chr8:19423329-19422886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 49
               

               Conread position:
               419-860
               

               Cow position:
               chr8:30158649-30159090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 119
               

               Conread position:
               419-860
               

               Cow position:
               chr8:39739723-39739283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 118
               

               Conread position:
               419-860
               

               Cow position:
               chr8:54572160-54572596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               243, 116
               

               Conread position:
               419-861
               

               Cow position:
               chr8:23111562-23111120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 388
               

               Conread position:
               419-867
               

               Cow position:
               chr8:12198158-12197708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 118
               

               Conread position:
               419-869
               

               Cow position:
               chr8:33993682-33994122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               398, 104
               

               Conread position:
               419-869
               

               Cow position:
               chr8:40033299-40032853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               234, 60
               

               Conread position:
               420-836
               

               Cow position:
               chr8:48081291-48081709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               242, 0
               

               Conread position:
               421-704
               

               Cow position:
               chr8:5679191-5678906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 58
               

               Conread position:
               421-862
               

               Cow position:
               chr8:30245310-30244882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 117
               

               Conread position:
               422-689
               

               Cow position:
               chr8:46126-46393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 46
               

               Conread position:
               422-836
               

               Cow position:
               chr8:11787693-11787280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 9
               

               Conread position:
               423-551
               

               Cow position:
               chr8:13743777-13743649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               423-603
               

               Cow position:
               chr8:24962173-24962357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               423-606
               

               Cow position:
               chr8:34240131-34240319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               424-611
               

               Cow position:
               chr8:4998920-4999109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               6, 142
               

               Conread position:
               424-618
               

               Cow position:
               chr8:45782432-45782239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               424-660
               

               Cow position:
               chr8:53943336-53943101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               102, 80
               

               Conread position:
               424-666
               

               Cow position:
               chr8:47678962-47679206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               424-667
               

               Cow position:
               chr8:23018965-23018722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               237, 41
               

               Conread position:
               424-754
               

               Cow position:
               chr8:24834235-24834576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 252
               

               Conread position:
               424-760
               

               Cow position:
               chr8:37552233-37551887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               37, 29
               

               Conread position:
               424-764
               

               Cow position:
               chr8:40709657-40709992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               118, 33
               

               Conread position:
               424-766
               

               Cow position:
               chr8:28293695-28293361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               332, 189
               

               Conread position:
               424-801
               

               Cow position:
               chr8:19978678-19978298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               64, 136
               

               Conread position:
               424-812
               

               Cow position:
               chr8:33814460-33814846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               238, 338
               

               Conread position:
               424-814
               

               Cow position:
               chr8:19998565-19998174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               206, 105
               

               Conread position:
               424-828
               

               Cow position:
               chr8:833893-834289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               229, 194
               

               Conread position:
               424-854
               

               Cow position:
               chr8:16938932-16938512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               237, 328
               

               Conread position:
               424-855
               

               Cow position:
               chr8:10970364-10970776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 55
               

               Conread position:
               425-837
               

               Cow position:
               chr8:33400674-33400268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               219, 266
               

               Conread position:
               428-624
               

               Cow position:
               chr8:18207713-18207524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               428-648
               

               Cow position:
               chr8:53787784-53788004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               428-689
               

               Cow position:
               chr8:7599237-7599494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               102, 39
               

               Conread position:
               428-801
               

               Cow position:
               chr8:29250338-29249958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               254
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               97, 150
               

               Conread position:
               428-860
               

               Cow position:
               chr8:43168511-43168075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 274
               

               Conread position:
               429-557
               

               Cow position:
               chr8:31763557-31763431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               429-583
               

               Cow position:
               chr8:26386774-26386622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               44, 105
               

               Conread position:
               429-587
               

               Cow position:
               chr8:47751165-47751006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               429-592
               

               Cow position:
               chr8:45130757-45130595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               42, 110
               

               Conread position:
               429-594
               

               Cow position:
               chr8:35562950-35563115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               134, 90
               

               Conread position:
               429-599
               

               Cow position:
               chr8:21848210-21848041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               30, 40
               

               Conread position:
               429-603
               

               Cow position:
               chr8:5893129-5893306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               99, 29
               

               Conread position:
               429-609
               

               Cow position:
               chr8:24128426-24128607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               429-612
               

               Cow position:
               chr8:35924163-35923985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               429-614
               

               Cow position:
               chr8:12779318-12779131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               38, 147
               

               Conread position:
               429-616
               

               Cow position:
               chr8:12290266-12290073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               56, 46
               

               Conread position:
               429-616
               

               Cow position:
               chr8:47461505-47461318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               429-619
               

               Cow position:
               chr8:20338828-20339023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               99, 135
               

               Conread position:
               429-619
               

               Cow position:
               chr8:36364937-36364741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               429-623
               

               Cow position:
               chr8:24948504-24948698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               429-635
               

               Cow position:
               chr8:42136178-42135968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               77, 44
               

               Conread position:
               429-635
               

               Cow position:
               chr8:53865320-53865532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               429-635
               

               Cow position:
               chr8:55090304-55090516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               429-640
               

               Cow position:
               chr8:57943856-57943646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               161
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               191, 0
               

               Conread position:
               429-642
               

               Cow position:
               chr8:1441070-1441289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               429-642
               

               Cow position:
               chr8:30418599-30418811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               163
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               429-643
               

               Cow position:
               chr8:36686449-36686669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               429-644
               

               Cow position:
               chr8:8481398-8481183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               104, 82
               

               Conread position:
               429-647
               

               Cow position:
               chr8:14933176-14932960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               164, 0
               

               Conread position:
               429-647
               

               Cow position:
               chr8:20891852-20892071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               96, 46
               

               Conread position:
               429-649
               

               Cow position:
               chr8:43686873-43687093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 209
               

               Conread position:
               429-649
               

               Cow position:
               chr8:54302501-54302717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               169
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               429-650
               

               Cow position:
               chr8:1169764-1169545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               168
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               429-651
               

               Cow position:
               chr8:34400435-34400652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               175
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               107, 39
               

               Conread position:
               429-653
               

               Cow position:
               chr8:300542-300320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               93, 132
               

               Conread position:
               429-653
               

               Cow position:
               chr8:29918018-29917795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               212, 0
               

               Conread position:
               429-654
               

               Cow position:
               chr8:225879-225649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               178
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               172, 211
               

               Conread position:
               429-654
               

               Cow position:
               chr8:8325586-8325363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               429-654
               

               Cow position:
               chr8:45354531-45354305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               198, 0
               

               Conread position:
               429-656
               

               Cow position:
               chr8:45830384-45830611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 86
               

               Conread position:
               429-658
               

               Cow position:
               chr8:47666587-47666368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               69, 89
               

               Conread position:
               429-660
               

               Cow position:
               chr8:20674275-20674041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               44, 182
               

               Conread position:
               429-660
               

               Cow position:
               chr8:42578583-42578348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               103, 93
               

               Conread position:
               429-661
               

               Cow position:
               chr8:1597047-1596817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               429-661
               

               Cow position:
               chr8:31314218-31314460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               429-661
               

               Cow position:
               chr8:35584060-35583832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               179
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               107, 116
               

               Conread position:
               429-661
               

               Cow position:
               chr8:36504792-36505029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               429-661
               

               Cow position:
               chr8:44005238-44005007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               429-661
               

               Cow position:
               chr8:47128374-47128604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               106, 24
               

               Conread position:
               429-667
               

               Cow position:
               chr8:53608824-53608589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               180
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               231, 151
               

               Conread position:
               429-669
               

               Cow position:
               chr8:61443532-61443779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               429-673
               

               Cow position:
               chr8:49332284-49332035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               179
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               103, 39
               

               Conread position:
               429-680
               

               Cow position:
               chr8:19546319-19546562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               183
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               53, 148
               

               Conread position:
               429-680
               

               Cow position:
               chr8:37433168-37433419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 96
               

               Conread position:
               429-688
               

               Cow position:
               chr8:4499713-4499983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               203
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               45, 20
               

               Conread position:
               429-688
               

               Cow position:
               chr8:43726750-43726484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               100, 76
               

               Conread position:
               429-692
               

               Cow position:
               chr8:22085108-22084845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 71
               

               Conread position:
               429-693
               

               Cow position:
               chr8:53948853-53948594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               429-700
               

               Cow position:
               chr8:8010395-8010675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               102, 60
               

               Conread position:
               429-724
               

               Cow position:
               chr8:4793471-4793763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               64, 176
               

               Conread position:
               429-727
               

               Cow position:
               chr8:759048-758733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               220
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               55, 154
               

               Conread position:
               429-727
               

               Cow position:
               chr8:37482857-37482565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               108, 44
               

               Conread position:
               429-734
               

               Cow position:
               chr8:43439112-43439415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 114
               

               Conread position:
               429-739
               

               Cow position:
               chr8:1936289-1936584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               211, 97
               

               Conread position:
               429-746
               

               Cow position:
               chr8:6087573-6087891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               230
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               255, 44
               

               Conread position:
               429-746
               

               Cow position:
               chr8:42604478-42604794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               29, 34
               

               Conread position:
               429-747
               

               Cow position:
               chr8:29027095-29026776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 94
               

               Conread position:
               429-751
               

               Cow position:
               chr8:32828067-32828387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               105, 132
               

               Conread position:
               429-754
               

               Cow position:
               chr8:3446552-3446235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 199
               

               Conread position:
               429-754
               

               Cow position:
               chr8:5503115-5503449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 295
               

               Conread position:
               429-754
               

               Cow position:
               chr8:24659983-24659658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 208
               

               Conread position:
               429-754
               

               Cow position:
               chr8:37192605-37192934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               237
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               30, 34
               

               Conread position:
               429-758
               

               Cow position:
               chr8:29517343-29517009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               234
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               97, 155
               

               Conread position:
               429-758
               

               Cow position:
               chr8:38573698-38573370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 114
               

               Conread position:
               429-759
               

               Cow position:
               chr8:45878572-45878898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 55
               

               Conread position:
               429-759
               

               Cow position:
               chr8:58636293-58636624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 169
               

               Conread position:
               429-762
               

               Cow position:
               chr8:38596695-38596355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               228, 60
               

               Conread position:
               429-762
               

               Cow position:
               chr8:55710928-55711250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 112
               

               Conread position:
               429-762
               

               Cow position:
               chr8:61606463-61606127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               103, 198
               

               Conread position:
               429-770
               

               Cow position:
               chr8:15569910-15569596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               233, 26
               

               Conread position:
               429-770
               

               Cow position:
               chr8:44651084-44651443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               242
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               101, 151
               

               Conread position:
               429-770
               

               Cow position:
               chr8:58875605-58875941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 74
               

               Conread position:
               429-792
               

               Cow position:
               chr8:5659869-5660234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               29, 34
               

               Conread position:
               429-792
               

               Cow position:
               chr8:41695282-41694913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 268
               

               Conread position:
               429-794
               

               Cow position:
               chr8:61522021-61522370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               250
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               104, 197
               

               Conread position:
               429-797
               

               Cow position:
               chr8:35211640-35211263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 278
               

               Conread position:
               429-801
               

               Cow position:
               chr8:2748943-2749319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               256
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               68, 31
               

               Conread position:
               429-806
               

               Cow position:
               chr8:1589479-1589112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               329, 37
               

               Conread position:
               429-806
               

               Cow position:
               chr8:10081455-10081824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 112
               

               Conread position:
               429-806
               

               Cow position:
               chr8:53451023-53451410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               178, 351
               

               Conread position:
               429-807
               

               Cow position:
               chr8:6438626-6438243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 214
               

               Conread position:
               429-807
               

               Cow position:
               chr8:7355008-7354625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               251
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               97, 83
               

               Conread position:
               429-807
               

               Cow position:
               chr8:8135002-8134605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               429-807
               

               Cow position:
               chr8:18485665-18486048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 242
               

               Conread position:
               429-807
               

               Cow position:
               chr8:29416819-29416433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 39
               

               Conread position:
               429-807
               

               Cow position:
               chr8:38523297-38523669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               268
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               107, 76
               

               Conread position:
               429-807
               

               Cow position:
               chr8:41951143-41951517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               255
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               106, 26
               

               Conread position:
               429-807
               

               Cow position:
               chr8:43981318-43980941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 51
               

               Conread position:
               429-808
               

               Cow position:
               chr8:8781216-8780845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 26
               

               Conread position:
               429-808
               

               Cow position:
               chr8:31954185-31954553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               271
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               136, 39
               

               Conread position:
               429-810
               

               Cow position:
               chr8:12814366-12814746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 33
               

               Conread position:
               429-817
               

               Cow position:
               chr8:13975407-13975806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 183
               

               Conread position:
               429-821
               

               Cow position:
               chr8:61098528-61098129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 261
               

               Conread position:
               429-830
               

               Cow position:
               chr8:45925154-45925542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 55
               

               Conread position:
               429-835
               

               Cow position:
               chr8:24234655-24235058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               233, 244
               

               Conread position:
               429-838
               

               Cow position:
               chr8:33407309-33406915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               233, 216
               

               Conread position:
               429-838
               

               Cow position:
               chr8:55726741-55726345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 211
               

               Conread position:
               429-844
               

               Cow position:
               chr8:33431789-33432191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               231, 52
               

               Conread position:
               429-851
               

               Cow position:
               chr8:4745382-4744955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 268
               

               Conread position:
               429-851
               

               Cow position:
               chr8:28884333-28884776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 0
               

               Conread position:
               429-851
               

               Cow position:
               chr8:42607744-42607336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               233, 68
               

               Conread position:
               429-852
               

               Cow position:
               chr8:50949289-50949719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 208
               

               Conread position:
               429-852
               

               Cow position:
               chr8:53252169-53251738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 245
               

               Conread position:
               429-853
               

               Cow position:
               chr8:35944862-35945294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 109
               

               Conread position:
               429-854
               

               Cow position:
               chr8:1303434-1303850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 100
               

               Conread position:
               429-854
               

               Cow position:
               chr8:4161491-4161081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 66
               

               Conread position:
               429-854
               

               Cow position:
               chr8:28229946-28229518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               231, 208
               

               Conread position:
               429-854
               

               Cow position:
               chr8:36055884-36055456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               198, 378
               

               Conread position:
               429-854
               

               Cow position:
               chr8:46480336-46479922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 101
               

               Conread position:
               429-857
               

               Cow position:
               chr8:24872346-24871925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 115
               

               Conread position:
               429-858
               

               Cow position:
               chr8:1115267-1114845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 55
               

               Conread position:
               429-858
               

               Cow position:
               chr8:60454730-60455144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 51
               

               Conread position:
               429-859
               

               Cow position:
               chr8:1472573-1473008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               221, 109
               

               Conread position:
               429-859
               

               Cow position:
               chr8:11078373-11078820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 352
               

               Conread position:
               429-859
               

               Cow position:
               chr8:21219681-21220107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               231, 105
               

               Conread position:
               429-859
               

               Cow position:
               chr8:46845020-46844583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               290
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               180, 351
               

               Conread position:
               429-860
               

               Cow position:
               chr8:1834425-1834873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 187
               

               Conread position:
               429-860
               

               Cow position:
               chr8:1999151-1999572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 171
               

               Conread position:
               429-860
               

               Cow position:
               chr8:6530949-6531369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 252
               

               Conread position:
               429-860
               

               Cow position:
               chr8:9917416-9917831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 45
               

               Conread position:
               429-860
               

               Cow position:
               chr8:9943002-9942574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               233, 270
               

               Conread position:
               429-860
               

               Cow position:
               chr8:13921958-13922378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 30
               

               Conread position:
               429-860
               

               Cow position:
               chr8:14947784-14947345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 243
               

               Conread position:
               429-860
               

               Cow position:
               chr8:18081042-18081488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 36
               

               Conread position:
               429-860
               

               Cow position:
               chr8:20836648-20837076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 114
               

               Conread position:
               429-860
               

               Cow position:
               chr8:21077127-21077538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               231, 101
               

               Conread position:
               429-860
               

               Cow position:
               chr8:25591342-25591770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 105
               

               Conread position:
               429-860
               

               Cow position:
               chr8:26607456-26607890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 108
               

               Conread position:
               429-860
               

               Cow position:
               chr8:36648925-36648504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 157
               

               Conread position:
               429-860
               

               Cow position:
               chr8:37122479-37122925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               297
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               95, 59
               

               Conread position:
               429-860
               

               Cow position:
               chr8:37881849-37882297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               205, 68
               

               Conread position:
               429-860
               

               Cow position:
               chr8:42424724-42424295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 106
               

               Conread position:
               429-860
               

               Cow position:
               chr8:43858527-43858102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 54
               

               Conread position:
               429-860
               

               Cow position:
               chr8:50708571-50709003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 109
               

               Conread position:
               429-860
               

               Cow position:
               chr8:50957800-50957382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 244
               

               Conread position:
               429-861
               

               Cow position:
               chr8:3891916-3891477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 362
               

               Conread position:
               429-861
               

               Cow position:
               chr8:9640876-9641307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 414
               

               Conread position:
               429-862
               

               Cow position:
               chr8:16297236-16296800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 429
               

               Conread position:
               429-862
               

               Cow position:
               chr8:49720657-49721093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 215
               

               Conread position:
               429-863
               

               Cow position:
               chr8:43191484-43191070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               285
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               233, 100
               

               Conread position:
               429-865
               

               Cow position:
               chr8:52309203-52308768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 90
               

               Conread position:
               429-868
               

               Cow position:
               chr8:13374066-13374504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 54
               

               Conread position:
               430-661
               

               Cow position:
               chr8:37376599-37376366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 15
               

               Conread position:
               430-661
               

               Cow position:
               chr8:51425851-51426071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               112, 50
               

               Conread position:
               430-661
               

               Cow position:
               chr8:52195423-52195656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               162
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               101, 44
               

               Conread position:
               430-666
               

               Cow position:
               chr8:47295268-47295515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               50, 192
               

               Conread position:
               430-685
               

               Cow position:
               chr8:22415938-22416184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               188
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               96, 75
               

               Conread position:
               430-722
               

               Cow position:
               chr8:39845157-39845451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               235, 0
               

               Conread position:
               430-736
               

               Cow position:
               chr8:57042595-57042286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 38
               

               Conread position:
               430-757
               

               Cow position:
               chr8:8200477-8200152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               92, 167
               

               Conread position:
               430-758
               

               Cow position:
               chr8:21323372-21323036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               28, 33
               

               Conread position:
               430-762
               

               Cow position:
               chr8:49600386-49600058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               237
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               105, 25
               

               Conread position:
               430-770
               

               Cow position:
               chr8:26868632-26868291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 107
               

               Conread position:
               430-770
               

               Cow position:
               chr8:45164591-45164259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               232
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               107, 25
               

               Conread position:
               430-799
               

               Cow position:
               chr8:47065624-47065257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 107
               

               Conread position:
               430-806
               

               Cow position:
               chr8:32080149-32079792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               258
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               40, 203
               

               Conread position:
               430-809
               

               Cow position:
               chr8:1509906-1509520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 55
               

               Conread position:
               430-809
               

               Cow position:
               chr8:20648671-20649072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               280
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               100, 62
               

               Conread position:
               430-811
               

               Cow position:
               chr8:31262204-31262603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               279
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               96, 18
               

               Conread position:
               431-619
               

               Cow position:
               chr8:42327568-42327762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               98, 37
               

               Conread position:
               431-646
               

               Cow position:
               chr8:12151304-12151525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               431-660
               

               Cow position:
               chr8:8267510-8267743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               92, 139
               

               Conread position:
               431-660
               

               Cow position:
               chr8:39424883-39424648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               431-722
               

               Cow position:
               chr8:9995426-9995713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               47, 183
               

               Conread position:
               431-751
               

               Cow position:
               chr8:4198303-4198627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 216
               

               Conread position:
               431-751
               

               Cow position:
               chr8:7101389-7101077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               223
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               231, 72
               

               Conread position:
               431-754
               

               Cow position:
               chr8:58643152-58642831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               230, 181
               

               Conread position:
               431-759
               

               Cow position:
               chr8:26650831-26651157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               230, 113
               

               Conread position:
               431-759
               

               Cow position:
               chr8:58857186-58857522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 258
               

               Conread position:
               431-807
               

               Cow position:
               chr8:6746616-6746251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               251
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               153, 37
               

               Conread position:
               431-816
               

               Cow position:
               chr8:33049982-33050372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 188
               

               Conread position:
               431-853
               

               Cow position:
               chr8:3014998-3015417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 108
               

               Conread position:
               431-860
               

               Cow position:
               chr8:41943278-41943705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               384, 109
               

               Conread position:
               431-869
               

               Cow position:
               chr8:11605852-11606291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 238
               

               Conread position:
               432-660
               

               Cow position:
               chr8:15871286-15871054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               433-571
               

               Cow position:
               chr8:27136010-27135879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               111, 35
               

               Conread position:
               433-618
               

               Cow position:
               chr8:4362896-4362709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               433-653
               

               Cow position:
               chr8:931339-931566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               43, 35
               

               Conread position:
               433-754
               

               Cow position:
               chr8:8916626-8916307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               228, 98
               

               Conread position:
               433-754
               

               Cow position:
               chr8:41650714-41651036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 260
               

               Conread position:
               433-783
               

               Cow position:
               chr8:812893-813243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               228, 135
               

               Conread position:
               433-810
               

               Cow position:
               chr8:4310324-4310699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               364, 158
               

               Conread position:
               433-836
               

               Cow position:
               chr8:4797931-4798314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               268
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               268, 159
               

               Conread position:
               433-836
               

               Cow position:
               chr8:50733156-50733561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 104
               

               Conread position:
               433-854
               

               Cow position:
               chr8:40914956-40914536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 231
               

               Conread position:
               433-854
               

               Cow position:
               chr8:45791756-45791335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               228, 124
               

               Conread position:
               434-582
               

               Cow position:
               chr8:38330975-38330829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               434-611
               

               Cow position:
               chr8:32314650-32314482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               434-640
               

               Cow position:
               chr8:19368130-19367924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               168
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               434-645
               

               Cow position:
               chr8:28413102-28412890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 44
               

               Conread position:
               434-660
               

               Cow position:
               chr8:20672657-20672427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               96, 195
               

               Conread position:
               434-669
               

               Cow position:
               chr8:21212321-21212557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 228
               

               Conread position:
               434-751
               

               Cow position:
               chr8:11136165-11135832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 34
               

               Conread position:
               434-751
               

               Cow position:
               chr8:27152456-27152137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               226, 0
               

               Conread position:
               434-765
               

               Cow position:
               chr8:4183011-4183339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               221
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               217, 93
               

               Conread position:
               434-770
               

               Cow position:
               chr8:1323003-1323340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 103
               

               Conread position:
               434-775
               

               Cow position:
               chr8:9169274-9168934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               227, 17
               

               Conread position:
               434-782
               

               Cow position:
               chr8:50734895-50735241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 101
               

               Conread position:
               434-807
               

               Cow position:
               chr8:22103656-22103283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               263
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               108, 21
               

               Conread position:
               434-827
               

               Cow position:
               chr8:18567926-18567529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 262
               

               Conread position:
               434-836
               

               Cow position:
               chr8:42009941-42010350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               284
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               86, 53
               

               Conread position:
               434-860
               

               Cow position:
               chr8:8030975-8030545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 103
               

               Conread position:
               434-860
               

               Cow position:
               chr8:21827215-21826801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 90
               

               Conread position:
               434-860
               

               Cow position:
               chr8:25082793-25083228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 332
               

               Conread position:
               434-860
               

               Cow position:
               chr8:42159725-42160150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 103
               

               Conread position:
               434-864
               

               Cow position:
               chr8:14924903-14924469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               227, 386
               

               Conread position:
               434-867
               

               Cow position:
               chr8:49397698-49398130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 103
               

               Conread position:
               434-877
               

               Cow position:
               chr8:25535110-25535551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 103
               

               Conread position:
               435-647
               

               Cow position:
               chr8:34663154-34663373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               435-727
               

               Cow position:
               chr8:16497851-16497572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               89, 139
               

               Conread position:
               435-747
               

               Cow position:
               chr8:40929881-40930180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 24
               

               Conread position:
               435-762
               

               Cow position:
               chr8:8811807-8812139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               226
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               39, 193
               

               Conread position:
               435-801
               

               Cow position:
               chr8:47469508-47469880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 115
               

               Conread position:
               435-808
               

               Cow position:
               chr8:51044945-51044571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               248
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               38, 230
               

               Conread position:
               435-836
               

               Cow position:
               chr8:2166248-2165847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               226, 353
               

               Conread position:
               435-854
               

               Cow position:
               chr8:46843333-46842911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 106
               

               Conread position:
               436-535
               

               Cow position:
               chr8:45942844-45942943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               82
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               436-551
               

               Cow position:
               chr8:54878411-54878296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               111, 101
               

               Conread position:
               436-555
               

               Cow position:
               chr8:19718853-19718734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               92
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               436-566
               

               Cow position:
               chr8:51068818-51068688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               111, 101
               

               Conread position:
               436-567
               

               Cow position:
               chr8:36344998-36344867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               436-567
               

               Cow position:
               chr8:36779235-36779104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               111, 101
               

               Conread position:
               436-582
               

               Cow position:
               chr8:8020122-8019976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               88, 98
               

               Conread position:
               436-583
               

               Cow position:
               chr8:22234276-22234128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               110
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               111, 101
               

               Conread position:
               436-584
               

               Cow position:
               chr8:47219478-47219626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               111, 101
               

               Conread position:
               436-590
               

               Cow position:
               chr8:46066191-46066345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               436-590
               

               Cow position:
               chr8:48205765-48205921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               436-590
               

               Cow position:
               chr8:56250240-56250086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               111, 101
               

               Conread position:
               436-592
               

               Cow position:
               chr8:11241296-11241452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               111, 101
               

               Conread position:
               436-595
               

               Cow position:
               chr8:54146701-54146860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               436-598
               

               Cow position:
               chr8:45789001-45788839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               436-602
               

               Cow position:
               chr8:25672273-25672439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               111, 101
               

               Conread position:
               436-602
               

               Cow position:
               chr8:49361687-49361849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               113, 50
               

               Conread position:
               436-606
               

               Cow position:
               chr8:46183268-46183438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               111, 101
               

               Conread position:
               436-607
               

               Cow position:
               chr8:51463321-51463490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               97
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               436-619
               

               Cow position:
               chr8:26960358-26960541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               436-621
               

               Cow position:
               chr8:13947493-13947317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               112, 38
               

               Conread position:
               436-625
               

               Cow position:
               chr8:52197799-52197988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               436-626
               

               Cow position:
               chr8:35757047-35756857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               154
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               111, 101
               

               Conread position:
               436-640
               

               Cow position:
               chr8:20564253-20564056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               436-640
               

               Cow position:
               chr8:27600821-27601025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               163
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               107, 102
               

               Conread position:
               436-641
               

               Cow position:
               chr8:10457227-10457431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               165
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 101
               

               Conread position:
               436-641
               

               Cow position:
               chr8:53838914-53839118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 101
               

               Conread position:
               436-642
               

               Cow position:
               chr8:44559530-44559319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               167
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               436-644
               

               Cow position:
               chr8:8987432-8987225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               436-644
               

               Cow position:
               chr8:20783777-20783563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               436-648
               

               Cow position:
               chr8:1011126-1011327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               27, 54
               

               Conread position:
               436-654
               

               Cow position:
               chr8:47868709-47868485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               436-654
               

               Cow position:
               chr8:54069982-54070198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               86, 135
               

               Conread position:
               436-656
               

               Cow position:
               chr8:25616476-25616256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               111, 101
               

               Conread position:
               436-660
               

               Cow position:
               chr8:6329497-6329732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               436-660
               

               Cow position:
               chr8:13559238-13559468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               436-660
               

               Cow position:
               chr8:24868241-24868020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               436-661
               

               Cow position:
               chr8:38043148-38042919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               174
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               436-661
               

               Cow position:
               chr8:45690344-45690125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               436-664
               

               Cow position:
               chr8:27659154-27659374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               162, 0
               

               Conread position:
               436-665
               

               Cow position:
               chr8:19296078-19295847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               95, 172
               

               Conread position:
               436-667
               

               Cow position:
               chr8:46202802-46203038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               106, 32
               

               Conread position:
               436-668
               

               Cow position:
               chr8:40744036-40743796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               183
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               436-669
               

               Cow position:
               chr8:8524799-8525033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 101
               

               Conread position:
               436-669
               

               Cow position:
               chr8:11117973-11117739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               225, 0
               

               Conread position:
               436-669
               

               Cow position:
               chr8:12310725-12310491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               178
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               111, 104
               

               Conread position:
               436-669
               

               Cow position:
               chr8:22058683-22058443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               436-669
               

               Cow position:
               chr8:24686947-24686714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               225, 209
               

               Conread position:
               436-670
               

               Cow position:
               chr8:7607642-7607408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 97
               

               Conread position:
               436-671
               

               Cow position:
               chr8:33652848-33652612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 92
               

               Conread position:
               436-672
               

               Cow position:
               chr8:50210265-50210028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               225, 0
               

               Conread position:
               436-674
               

               Cow position:
               chr8:20080562-20080322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               230, 0
               

               Conread position:
               436-674
               

               Cow position:
               chr8:50684026-50684264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 101
               

               Conread position:
               436-679
               

               Cow position:
               chr8:21220589-21220829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               225, 89
               

               Conread position:
               436-687
               

               Cow position:
               chr8:17315575-17315825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               225, 58
               

               Conread position:
               436-688
               

               Cow position:
               chr8:8484049-8484302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 101
               

               Conread position:
               436-688
               

               Cow position:
               chr8:8609063-8608810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 101
               

               Conread position:
               436-688
               

               Cow position:
               chr8:10752333-10752585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 90
               

               Conread position:
               436-688
               

               Cow position:
               chr8:24404512-24404765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 101
               

               Conread position:
               436-688
               

               Cow position:
               chr8:25614257-25614510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 101
               

               Conread position:
               436-688
               

               Cow position:
               chr8:34047935-34048186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 101
               

               Conread position:
               436-688
               

               Cow position:
               chr8:38402345-38402598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 101
               

               Conread position:
               436-727
               

               Cow position:
               chr8:29878173-29877879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               213
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               135, 89
               

               Conread position:
               436-728
               

               Cow position:
               chr8:44114046-44114338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               225, 104
               

               Conread position:
               436-738
               

               Cow position:
               chr8:17317501-17317804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 101
               

               Conread position:
               436-747
               

               Cow position:
               chr8:14259060-14259363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 51
               

               Conread position:
               436-748
               

               Cow position:
               chr8:28321505-28321818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               225, 0
               

               Conread position:
               436-751
               

               Cow position:
               chr8:53229567-53229879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               224, 22
               

               Conread position:
               436-754
               

               Cow position:
               chr8:3852912-3852593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               225, 0
               

               Conread position:
               436-754
               

               Cow position:
               chr8:4926237-4925917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               93, 246
               

               Conread position:
               436-754
               

               Cow position:
               chr8:42117335-42117652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               225, 74
               

               Conread position:
               436-758
               

               Cow position:
               chr8:2842746-2843069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 101
               

               Conread position:
               436-759
               

               Cow position:
               chr8:20099212-20099536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 32
               

               Conread position:
               436-764
               

               Cow position:
               chr8:46329212-46329547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               225, 174
               

               Conread position:
               436-767
               

               Cow position:
               chr8:741571-741230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 47
               

               Conread position:
               436-767
               

               Cow position:
               chr8:46953662-46953979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               235
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               258, 106
               

               Conread position:
               436-767
               

               Cow position:
               chr8:51880395-51880061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 73
               

               Conread position:
               436-770
               

               Cow position:
               chr8:661036-660701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 106
               

               Conread position:
               436-770
               

               Cow position:
               chr8:3957163-3957498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 101
               

               Conread position:
               436-770
               

               Cow position:
               chr8:6060950-6060615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 98
               

               Conread position:
               436-770
               

               Cow position:
               chr8:14834358-14834022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 101
               

               Conread position:
               436-770
               

               Cow position:
               chr8:22761211-22761546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 101
               

               Conread position:
               436-770
               

               Cow position:
               chr8:24622632-24622294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 101
               

               Conread position:
               436-770
               

               Cow position:
               chr8:39384614-39384279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 101
               

               Conread position:
               436-770
               

               Cow position:
               chr8:46056988-46056658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               225, 201
               

               Conread position:
               436-770
               

               Cow position:
               chr8:60065079-60065414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 101
               

               Conread position:
               436-772
               

               Cow position:
               chr8:46655559-46655892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               226, 32
               

               Conread position:
               436-773
               

               Cow position:
               chr8:8469903-8470238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               265, 46
               

               Conread position:
               436-773
               

               Cow position:
               chr8:59634403-59634065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 101
               

               Conread position:
               436-775
               

               Cow position:
               chr8:55122922-55122584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 212
               

               Conread position:
               436-775
               

               Cow position:
               chr8:59277702-59277363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 32
               

               Conread position:
               436-783
               

               Cow position:
               chr8:11805777-11806126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 139
               

               Conread position:
               436-785
               

               Cow position:
               chr8:21119658-21119303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               103, 56
               

               Conread position:
               436-795
               

               Cow position:
               chr8:21115830-21115472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 9
               

               Conread position:
               436-798
               

               Cow position:
               chr8:1224540-1224177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 101
               

               Conread position:
               436-798
               

               Cow position:
               chr8:21788520-21788159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               226, 106
               

               Conread position:
               436-799
               

               Cow position:
               chr8:46276761-46276400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 101
               

               Conread position:
               436-799
               

               Cow position:
               chr8:51882072-51881708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 101
               

               Conread position:
               436-799
               

               Cow position:
               chr8:51885256-51884892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 101
               

               Conread position:
               436-801
               

               Cow position:
               chr8:20885372-20885006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               225, 256
               

               Conread position:
               436-803
               

               Cow position:
               chr8:4523319-4522958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 32
               

               Conread position:
               436-805
               

               Cow position:
               chr8:8311524-8311152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 101
               

               Conread position:
               436-805
               

               Cow position:
               chr8:47924291-47924662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               225, 0
               

               Conread position:
               436-805
               

               Cow position:
               chr8:59177770-59177400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 101
               

               Conread position:
               436-806
               

               Cow position:
               chr8:4727645-4727274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 101
               

               Conread position:
               436-806
               

               Cow position:
               chr8:30230144-30229773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               251
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               90, 267
               

               Conread position:
               436-807
               

               Cow position:
               chr8:16757879-16757495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               262
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               53, 278
               

               Conread position:
               436-807
               

               Cow position:
               chr8:19443444-19443073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 72
               

               Conread position:
               436-807
               

               Cow position:
               chr8:27368622-27368998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               263
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               88, 207
               

               Conread position:
               436-807
               

               Cow position:
               chr8:43904285-43904683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               264
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               25, 31
               

               Conread position:
               436-807
               

               Cow position:
               chr8:59258009-59257636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 104
               

               Conread position:
               436-808
               

               Cow position:
               chr8:19362165-19362543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 81
               

               Conread position:
               436-808
               

               Cow position:
               chr8:49620423-49620795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               265, 244
               

               Conread position:
               436-810
               

               Cow position:
               chr8:476782-477158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 101
               

               Conread position:
               436-810
               

               Cow position:
               chr8:817438-817814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 101
               

               Conread position:
               436-810
               

               Cow position:
               chr8:7165421-7165797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 101
               

               Conread position:
               436-810
               

               Cow position:
               chr8:7426935-7426560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 101
               

               Conread position:
               436-810
               

               Cow position:
               chr8:13824098-13823722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 101
               

               Conread position:
               436-810
               

               Cow position:
               chr8:21043578-21043954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 101
               

               Conread position:
               436-810
               

               Cow position:
               chr8:21990085-21990460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 32
               

               Conread position:
               436-810
               

               Cow position:
               chr8:22531242-22530867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 101
               

               Conread position:
               436-810
               

               Cow position:
               chr8:25336380-25336004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 101
               

               Conread position:
               436-810
               

               Cow position:
               chr8:33045018-33044642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 101
               

               Conread position:
               436-810
               

               Cow position:
               chr8:33592344-33592719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 101
               

               Conread position:
               436-810
               

               Cow position:
               chr8:35763013-35763389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 101
               

               Conread position:
               436-810
               

               Cow position:
               chr8:35962387-35962763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 101
               

               Conread position:
               436-810
               

               Cow position:
               chr8:36973527-36973903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 101
               

               Conread position:
               436-810
               

               Cow position:
               chr8:39640163-39639787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 21
               

               Conread position:
               436-810
               

               Cow position:
               chr8:51856262-51856638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 101
               

               Conread position:
               436-811
               

               Cow position:
               chr8:11071339-11071716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 101
               

               Conread position:
               436-811
               

               Cow position:
               chr8:12286619-12286245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 71
               

               Conread position:
               436-813
               

               Cow position:
               chr8:9963046-9962665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 181
               

               Conread position:
               436-813
               

               Cow position:
               chr8:26039592-26039950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               254
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               166, 0
               

               Conread position:
               436-821
               

               Cow position:
               chr8:10337498-10337112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 124
               

               Conread position:
               436-822
               

               Cow position:
               chr8:54866942-54866555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 101
               

               Conread position:
               436-823
               

               Cow position:
               chr8:1016552-1016164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 101
               
UCSC Genome Browser
               Conread position:
               436-823
               

               Cow position:
               chr8:50799838-50799449 (view  custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 101
               
UCSC Genome Browser
               
               
               
Conread position: 436-823

               
               
               
Cow position: chr8:56553993-56554382 (view  custom track)

               
               
               
Alignm length: 391

               
               
               
Alignm identity: 290

               
               
               
Alignm E-value: 0

               
               
               
Alignm gaps (pig, cow): 111, 101
UCSC Genome Browser
               
               
               
Conread position: 436-825

               
               
               
Cow position: chr8:16195103-16195487 (view  custom track)

               
               
               
Alignm length: 393

               
               
               
Alignm identity: 242

               
               
               
Alignm E-value: 0

               
               
               
Alignm gaps (pig, cow): 37, 76

               
               
               Conread position:436-828
               
               
               Cow position:chr8:7050864-7050470 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:396
               
               
               Alignm identity:276
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-828
               
               
               Cow position:chr8:17434686-17435078 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:396
               
               
               Alignm identity:291
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 83

               
               
               Conread position:436-828
               
               
               Cow position:chr8:22492382-22491991 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:396
               
               
               Alignm identity:282
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-828
               
               
               Cow position:chr8:27551697-27551303 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:396
               
               
               Alignm identity:288
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-828
               
               
               Cow position:chr8:45340156-45340550 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:396
               
               
               Alignm identity:290
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-829
               
               
               Cow position:chr8:4572331-4571936 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:397
               
               
               Alignm identity:295
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-831
               
               
               Cow position:chr8:12842585-12842992 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:410
               
               
               Alignm identity:306
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):214, 258

               
               
               Conread position:436-831
               
               
               Cow position:chr8:24912063-24911666 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:400
               
               
               Alignm identity:293
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 104

               
               
               Conread position:436-831
               
               
               Cow position:chr8:51060160-51059760 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:402
               
               
               Alignm identity:274
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):17, 389

               
               
               Conread position:436-832
               
               
               Cow position:chr8:58123754-58123360 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:400
               
               
               Alignm identity:292
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):224, 105

               
               
               Conread position:436-833
               
               
               Cow position:chr8:13439684-13439284 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:402
               
               
               Alignm identity:294
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-836
               
               
               Cow position:chr8:1571309-1571711 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:405
               
               
               Alignm identity:289
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-836
               
               
               Cow position:chr8:1810889-1810488 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:403
               
               
               Alignm identity:299
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-836
               
               
               Cow position:chr8:3332677-3332281 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:405
               
               
               Alignm identity:291
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):226, 72

               
               
               Conread position:436-836
               
               
               Cow position:chr8:4473119-4473518 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:409
               
               
               Alignm identity:299
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 104

               
               
               Conread position:436-836
               
               
               Cow position:chr8:6328597-6328999 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:406
               
               
               Alignm identity:299
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-836
               
               
               Cow position:chr8:6464164-6463768 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:403
               
               
               Alignm identity:293
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):225, 106

               
               
               Conread position:436-836
               
               
               Cow position:chr8:7131867-7132269 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:404
               
               
               Alignm identity:295
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-836
               
               
               Cow position:chr8:7415907-7416309 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:404
               
               
               Alignm identity:296
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-836
               
               
               Cow position:chr8:7651362-7651764 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:404
               
               
               Alignm identity:296
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-836
               
               
               Cow position:chr8:8312501-8312105 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:404
               
               
               Alignm identity:293
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):225, 99

               
               
               Conread position:436-836
               
               
               Cow position:chr8:8678322-8677920 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:404
               
               
               Alignm identity:297
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 104

               
               
               Conread position:436-836
               
               
               Cow position:chr8:15761121-15760719 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:404
               
               
               Alignm identity:293
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-836
               
               
               Cow position:chr8:15865699-15866097 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:404
               
               
               Alignm identity:288
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-836
               
               
               Cow position:chr8:21154282-21153880 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:404
               
               
               Alignm identity:298
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-836
               
               
               Cow position:chr8:22331603-22331204 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:404
               
               
               Alignm identity:292
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-836
               
               
               Cow position:chr8:23500580-23500178 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:405
               
               
               Alignm identity:296
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-836
               
               
               Cow position:chr8:23752399-23752797 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:405
               
               
               Alignm identity:282
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):125, 37

               
               
               Conread position:436-836
               
               
               Cow position:chr8:23915550-23915950 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:404
               
               
               Alignm identity:296
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 87

               
               
               Conread position:436-836
               
               
               Cow position:chr8:25093389-25093791 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:404
               
               
               Alignm identity:294
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-836
               
               
               Cow position:chr8:26391069-26390667 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:404
               
               
               Alignm identity:298
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-836
               
               
               Cow position:chr8:27074603-27075005 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:404
               
               
               Alignm identity:294
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-836
               
               
               Cow position:chr8:31165779-31166181 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:403
               
               
               Alignm identity:290
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):225, 0

               
               
               Conread position:436-836
               
               
               Cow position:chr8:36332660-36332258 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:403
               
               
               Alignm identity:288
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):225, 0

               
               
               Conread position:436-836
               
               
               Cow position:chr8:36665162-36664760 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:404
               
               
               Alignm identity:295
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-836
               
               
               Cow position:chr8:40330879-40330480 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:405
               
               
               Alignm identity:287
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-836
               
               
               Cow position:chr8:40585053-40585454 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:404
               
               
               Alignm identity:294
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-836
               
               
               Cow position:chr8:41658826-41658427 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:405
               
               
               Alignm identity:291
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):88, 37

               
               
               Conread position:436-836
               
               
               Cow position:chr8:43109435-43109033 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:403
               
               
               Alignm identity:286
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):225, 0

               
               
               Conread position:436-836
               
               
               Cow position:chr8:46625732-46626134 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:404
               
               
               Alignm identity:294
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-836
               
               
               Cow position:chr8:47777086-47777488 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:405
               
               
               Alignm identity:294
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-836
               
               
               Cow position:chr8:48767278-48767690 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:414
               
               
               Alignm identity:304
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):37, 394

               
               
               Conread position:436-836
               
               
               Cow position:chr8:49934062-49933661 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:404
               
               
               Alignm identity:291
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-836
               
               
               Cow position:chr8:50762378-50762780 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:404
               
               
               Alignm identity:291
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-836
               
               
               Cow position:chr8:50988537-50988133 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:408
               
               
               Alignm identity:291
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):225, 242

               
               
               Conread position:436-836
               
               
               Cow position:chr8:51019174-51018771 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:405
               
               
               Alignm identity:295
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-836
               
               
               Cow position:chr8:51219861-51220263 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:404
               
               
               Alignm identity:298
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-836
               
               
               Cow position:chr8:51427230-51427634 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:407
               
               
               Alignm identity:295
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):112, 101

               
               
               Conread position:436-836
               
               
               Cow position:chr8:51678836-51678435 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:404
               
               
               Alignm identity:290
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 65

               
               
               Conread position:436-836
               
               
               Cow position:chr8:54015800-54016202 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:404
               
               
               Alignm identity:293
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-836
               
               
               Cow position:chr8:55270544-55270142 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:404
               
               
               Alignm identity:295
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-836
               
               
               Cow position:chr8:58034379-58033982 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:406
               
               
               Alignm identity:293
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):222, 75

               
               
               Conread position:436-837
               
               
               Cow position:chr8:4298727-4299134 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:410
               
               
               Alignm identity:283
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):133, 388

               
               
               Conread position:436-837
               
               
               Cow position:chr8:13298473-13298070 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:405
               
               
               Alignm identity:291
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-837
               
               
               Cow position:chr8:18990300-18989901 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:408
               
               
               Alignm identity:296
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):150, 102

               
               
               Conread position:436-840
               
               
               Cow position:chr8:17126548-17126146 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:409
               
               
               Alignm identity:293
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):265, 38

               
               
               Conread position:436-851
               
               
               Cow position:chr8:795223-794806 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:418
               
               
               Alignm identity:298
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):225, 0

               
               
               Conread position:436-851
               
               
               Cow position:chr8:1508349-1507932 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:419
               
               
               Alignm identity:306
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-851
               
               
               Cow position:chr8:9056685-9056268 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:419
               
               
               Alignm identity:308
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-851
               
               
               Cow position:chr8:11901253-11900836 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:419
               
               
               Alignm identity:300
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-851
               
               
               Cow position:chr8:17489035-17488640 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:419
               
               
               Alignm identity:292
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):225, 104

               
               
               Conread position:436-851
               
               
               Cow position:chr8:18296287-18295872 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:419
               
               
               Alignm identity:293
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):110, 98

               
               
               Conread position:436-851
               
               
               Cow position:chr8:18656755-18656339 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:420
               
               
               Alignm identity:308
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):81, 14

               
               
               Conread position:436-851
               
               
               Cow position:chr8:26879523-26879940 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:419
               
               
               Alignm identity:304
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-851
               
               
               Cow position:chr8:29764789-29765199 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:420
               
               
               Alignm identity:313
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):126, 98

               
               
               Conread position:436-851
               
               
               Cow position:chr8:31735911-31736326 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:419
               
               
               Alignm identity:302
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-851
               
               
               Cow position:chr8:34253543-34253960 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:419
               
               
               Alignm identity:301
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):110, 101

               
               
               Conread position:436-851
               
               
               Cow position:chr8:34350820-34351233 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:420
               
               
               Alignm identity:302
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-851
               
               
               Cow position:chr8:38561477-38561068 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:421
               
               
               Alignm identity:296
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):222, 102

               
               
               Conread position:436-851
               
               
               Cow position:chr8:42317284-42316856 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:430
               
               
               Alignm identity:300
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):62, 112

               
               
               Conread position:436-851
               
               
               Cow position:chr8:54245692-54245275 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:419
               
               
               Alignm identity:302
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-853
               
               
               Cow position:chr8:36893381-36892962 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:425
               
               
               Alignm identity:302
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):27, 140

               
               
               Conread position:436-853
               
               
               Cow position:chr8:47656930-47656515 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:421
               
               
               Alignm identity:308
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):225, 326

               
               
               Conread position:436-853
               
               
               Cow position:chr8:56728456-56728880 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:425
               
               
               Alignm identity:302
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):117, 0

               
               
               Conread position:436-854
               
               
               Cow position:chr8:4690382-4690802 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:421
               
               
               Alignm identity:291
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):225, 0

               
               
               Conread position:436-854
               
               
               Cow position:chr8:8971026-8970607 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:422
               
               
               Alignm identity:298
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):225, 32

               
               
               Conread position:436-854
               
               
               Cow position:chr8:14587892-14587473 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:422
               
               
               Alignm identity:306
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):225, 323

               
               
               Conread position:436-854
               
               
               Cow position:chr8:32621465-32621047 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:424
               
               
               Alignm identity:311
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):224, 93

               
               
               Conread position:436-854
               
               
               Cow position:chr8:35529656-35530075 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:423
               
               
               Alignm identity:310
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):225, 245

               
               
               Conread position:436-854
               
               
               Cow position:chr8:38089944-38090363 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:424
               
               
               Alignm identity:314
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):225, 16

               
               
               Conread position:436-854
               
               
               Cow position:chr8:50927120-50926706 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:423
               
               
               Alignm identity:298
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):265, 190

               
               
               Conread position:436-854
               
               
               Cow position:chr8:60067862-60068274 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:424
               
               
               Alignm identity:298
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):225, 245

               
               
               Conread position:436-854
               
               
               Cow position:chr8:61195488-61195065 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:428
               
               
               Alignm identity:308
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):37, 108

               
               
               Conread position:436-857
               
               
               Cow position:chr8:5020984-5021407 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:428
               
               
               Alignm identity:305
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):108, 101

               
               
               Conread position:436-859
               
               
               Cow position:chr8:23137210-23136792 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:428
               
               
               Alignm identity:314
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):22, 31

               
               
               Conread position:436-860
               
               
               Cow position:chr8:656143-655718 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:429
               
               
               Alignm identity:319
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):225, 104

               
               
               Conread position:436-860
               
               
               Cow position:chr8:1499967-1499541 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:428
               
               
               Alignm identity:295
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-860
               
               
               Cow position:chr8:13830952-13830526 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:427
               
               
               Alignm identity:302
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):225, 0

               
               
               Conread position:436-860
               
               
               Cow position:chr8:13930957-13930532 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:428
               
               
               Alignm identity:307
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-860
               
               
               Cow position:chr8:16143653-16144079 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:433
               
               
               Alignm identity:316
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):37, 236

               
               
               Conread position:436-860
               
               
               Cow position:chr8:16939717-16939291 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:429
               
               
               Alignm identity:305
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-860
               
               
               Cow position:chr8:18017054-18017469 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:429
               
               
               Alignm identity:310
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):112, 101

               
               
               Conread position:436-860
               
               
               Cow position:chr8:19053264-19053699 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:441
               
               
               Alignm identity:312
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):61, 259

               
               
               Conread position:436-860
               
               
               Cow position:chr8:26176785-26176360 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:431
               
               
               Alignm identity:306
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 32

               
               
               Conread position:436-860
               
               
               Cow position:chr8:26625401-26625823 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:430
               
               
               Alignm identity:336
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):56, 334

               
               
               Conread position:436-860
               
               
               Cow position:chr8:26671186-26670760 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:428
               
               
               Alignm identity:315
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-860
               
               
               Cow position:chr8:30488919-30488493 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:428
               
               
               Alignm identity:291
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-860
               
               
               Cow position:chr8:31253331-31253763 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:437
               
               
               Alignm identity:307
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):101, 336

               
               
               Conread position:436-860
               
               
               Cow position:chr8:32042772-32043198 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:429
               
               
               Alignm identity:304
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-860
               
               
               Cow position:chr8:32627097-32626670 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:429
               
               
               Alignm identity:306
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):225, 385

               
               
               Conread position:436-860
               
               
               Cow position:chr8:35291243-35290813 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:432
               
               
               Alignm identity:311
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):91, 105

               
               
               Conread position:436-860
               
               
               Cow position:chr8:35473277-35473703 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:429
               
               
               Alignm identity:307
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):225, 245

               
               
               Conread position:436-860
               
               
               Cow position:chr8:43247960-43248387 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:429
               
               
               Alignm identity:306
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):37, 102

               
               
               Conread position:436-860
               
               
               Cow position:chr8:43852577-43852154 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:429
               
               
               Alignm identity:304
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):225, 153

               
               
               Conread position:436-860
               
               
               Cow position:chr8:49879481-49879885 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:429
               
               
               Alignm identity:285
               
               
               Alignm E-value:1e-38
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-860
               
               
               Cow position:chr8:50324802-50325219 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:428
               
               
               Alignm identity:294
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-860
               
               
               Cow position:chr8:55189991-55190417 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:428
               
               
               Alignm identity:308
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-860
               
               
               Cow position:chr8:60115104-60115530 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:427
               
               
               Alignm identity:303
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):225, 0

               
               
               Conread position:436-860
               
               
               Cow position:chr8:60769418-60768992 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:428
               
               
               Alignm identity:305
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-861
               
               
               Cow position:chr8:6588049-6587623 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:429
               
               
               Alignm identity:280
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-861
               
               
               Cow position:chr8:6874829-6875258 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:430
               
               
               Alignm identity:305
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):225, 0

               
               
               Conread position:436-861
               
               
               Cow position:chr8:8697035-8697461 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:428
               
               
               Alignm identity:300
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):225, 46

               
               
               Conread position:436-861
               
               
               Cow position:chr8:18049142-18049550 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:430
               
               
               Alignm identity:326
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):225, 26

               
               
               Conread position:436-861
               
               
               Cow position:chr8:45070908-45071323 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:428
               
               
               Alignm identity:315
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):137, 144

               
               
               Conread position:436-861
               
               
               Cow position:chr8:47752386-47751961 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:431
               
               
               Alignm identity:324
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):99, 32

               
               
               Conread position:436-864
               
               
               Cow position:chr8:26015004-26015429 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:433
               
               
               Alignm identity:312
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):112, 32

               
               
               Conread position:436-864
               
               
               Cow position:chr8:60267366-60267798 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:434
               
               
               Alignm identity:312
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):225, 386

               
               
               Conread position:436-866
               
               
               Cow position:chr8:7275992-7275559 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:435
               
               
               Alignm identity:310
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-866
               
               
               Cow position:chr8:22471949-22471516 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:435
               
               
               Alignm identity:310
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-866
               
               
               Cow position:chr8:40427037-40426604 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:435
               
               
               Alignm identity:311
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-866
               
               
               Cow position:chr8:51687387-51686954 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:435
               
               
               Alignm identity:312
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-867
               
               
               Cow position:chr8:1344988-1344555 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:436
               
               
               Alignm identity:299
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-867
               
               
               Cow position:chr8:1469118-1469552 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:436
               
               
               Alignm identity:306
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-867
               
               
               Cow position:chr8:8382374-8382800 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:436
               
               
               Alignm identity:310
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):37, 102

               
               
               Conread position:436-867
               
               
               Cow position:chr8:16303060-16303494 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:436
               
               
               Alignm identity:312
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-867
               
               
               Cow position:chr8:16384856-16385290 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:436
               
               
               Alignm identity:311
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-867
               
               
               Cow position:chr8:16732625-16732202 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:435
               
               
               Alignm identity:299
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-867
               
               
               Cow position:chr8:22568310-22567876 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:436
               
               
               Alignm identity:313
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-867
               
               
               Cow position:chr8:28251069-28250635 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:436
               
               
               Alignm identity:310
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-867
               
               
               Cow position:chr8:30492306-30492744 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:441
               
               
               Alignm identity:316
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-867
               
               
               Cow position:chr8:35526235-35525802 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:436
               
               
               Alignm identity:309
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-867
               
               
               Cow position:chr8:38048959-38049380 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:436
               
               
               Alignm identity:306
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-867
               
               
               Cow position:chr8:43770354-43770788 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:436
               
               
               Alignm identity:309
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-867
               
               
               Cow position:chr8:51403576-51404009 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:436
               
               
               Alignm identity:313
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-868
               
               
               Cow position:chr8:25071519-25071083 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:439
               
               
               Alignm identity:315
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-868
               
               
               Cow position:chr8:32607399-32606964 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:438
               
               
               Alignm identity:309
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-869
               
               
               Cow position:chr8:8666841-8666404 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:439
               
               
               Alignm identity:313
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):112, 101

               
               
               Conread position:436-869
               
               
               Cow position:chr8:49687697-49687256 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:452
               
               
               Alignm identity:303
               
               
               Alignm E-value:7.00649e-44
               
               
               Alignm gaps (pig, cow):176, 73

               
               
               Conread position:436-869
               
               
               Cow position:chr8:60813672-60813236 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:439
               
               
               Alignm identity:314
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 32

               
               
               Conread position:436-870
               
               
               Cow position:chr8:7094266-7093830 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:438
               
               
               Alignm identity:288
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-871
               
               
               Cow position:chr8:14302682-14303116 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:440
               
               
               Alignm identity:307
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):224, 243

               
               
               Conread position:436-871
               
               
               Cow position:chr8:21312769-21312329 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:442
               
               
               Alignm identity:312
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-871
               
               
               Cow position:chr8:55444466-55444026 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:444
               
               
               Alignm identity:318
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-873
               
               
               Cow position:chr8:47324846-47325287 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:443
               
               
               Alignm identity:316
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-875
               
               
               Cow position:chr8:44017189-44017633 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:446
               
               
               Alignm identity:317
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-877
               
               
               Cow position:chr8:29600548-29600989 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:443
               
               
               Alignm identity:242
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):225, 54

               
               
               Conread position:436-877
               
               
               Cow position:chr8:44500925-44500480 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:447
               
               
               Alignm identity:319
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-878
               
               
               Cow position:chr8:22118504-22118953 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:452
               
               
               Alignm identity:324
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-908
               
               
               Cow position:chr8:26860043-26860515 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:474
               
               
               Alignm identity:124
               
               
               Alignm E-value:6e-32
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-919
               
               
               Cow position:chr8:50430162-50429684 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:487
               
               
               Alignm identity:345
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 101

               
               
               Conread position:436-928
               
               
               Cow position:chr8:15900440-15899948 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:499
               
               
               Alignm identity:346
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 32

               
               
               Conread position:437-588
               
               
               Cow position:chr8:5196098-5196249 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:153
               
               
               Alignm identity:120
               
               
               Alignm E-value:5e-30
               
               
               Alignm gaps (pig, cow):110, 100

               
               
               Conread position:437-592
               
               
               Cow position:chr8:39321456-39321301 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:156
               
               
               Alignm identity:118
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:437-598
               
               
               Cow position:chr8:19988220-19988059 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:163
               
               
               Alignm identity:135
               
               
               Alignm E-value:1e-39
               
               
               Alignm gaps (pig, cow):110, 100

               
               
               Conread position:437-634
               
               
               Cow position:chr8:6747608-6747414 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:198
               
               
               Alignm identity:147
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):20, 0

               
               
               Conread position:437-642
               
               
               Cow position:chr8:42457231-42457440 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:212
               
               
               Alignm identity:153
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):43, 99

               
               
               Conread position:437-647
               
               
               Cow position:chr8:47358746-47358532 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:218
               
               
               Alignm identity:156
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):56, 36

               
               
               Conread position:437-650
               
               
               Cow position:chr8:217931-218144 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:214
               
               
               Alignm identity:166
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:437-650
               
               
               Cow position:chr8:26195700-26195488 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:220
               
               
               Alignm identity:154
               
               
               Alignm E-value:7e-23
               
               
               Alignm gaps (pig, cow):89, 36

               
               
               Conread position:437-659
               
               
               Cow position:chr8:57136140-57136361 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:223
               
               
               Alignm identity:182
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):45, 0

               
               
               Conread position:437-661
               
               
               Cow position:chr8:29030647-29030418 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:231
               
               
               Alignm identity:177
               
               
               Alignm E-value:1.96182e-44
               
               
               Alignm gaps (pig, cow):91, 217

               
               
               Conread position:437-663
               
               
               Cow position:chr8:34287104-34287339 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:236
               
               
               Alignm identity:165
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):91, 0

               
               
               Conread position:437-667
               
               
               Cow position:chr8:55026492-55026725 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:238
               
               
               Alignm identity:175
               
               
               Alignm E-value:9e-36
               
               
               Alignm gaps (pig, cow):104, 48

               
               
               Conread position:437-669
               
               
               Cow position:chr8:16032304-16032077 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:236
               
               
               Alignm identity:184
               
               
               Alignm E-value:1.96182e-44
               
               
               Alignm gaps (pig, cow):169, 77

               
               
               Conread position:437-710
               
               
               Cow position:chr8:39182517-39182242 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:276
               
               
               Alignm identity:210
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):43, 0

               
               
               Conread position:437-752
               
               
               Cow position:chr8:983249-983567 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:322
               
               
               Alignm identity:239
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):106, 25

               
               
               Conread position:437-758
               
               
               Cow position:chr8:16685136-16684818 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:327
               
               
               Alignm identity:209
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):200, 5

               
               
               Conread position:437-758
               
               
               Cow position:chr8:46799776-46799450 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:328
               
               
               Alignm identity:246
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):37, 86

               
               
               Conread position:437-764
               
               
               Cow position:chr8:51861773-51862110 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:339
               
               
               Alignm identity:238
               
               
               Alignm E-value:1.4013e-45
               
               
               Alignm gaps (pig, cow):22, 254

               
               
               Conread position:437-770
               
               
               Cow position:chr8:11318446-11318779 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:336
               
               
               Alignm identity:246
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):110, 31

               
               
               Conread position:437-773
               
               
               Cow position:chr8:48099613-48099277 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:339
               
               
               Alignm identity:261
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 103

               
               
               Conread position:437-792
               
               
               Cow position:chr8:48955442-48955799 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:367
               
               
               Alignm identity:272
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):214, 169

               
               
               Conread position:437-806
               
               
               Cow position:chr8:51684536-51684153 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:390
               
               
               Alignm identity:251
               
               
               Alignm E-value:8e-24
               
               
               Alignm gaps (pig, cow):53, 45

               
               
               Conread position:437-807
               
               
               Cow position:chr8:29028532-29028183 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:371
               
               
               Alignm identity:253
               
               
               Alignm E-value:1e-39
               
               
               Alignm gaps (pig, cow):16, 0

               
               
               Conread position:437-808
               
               
               Cow position:chr8:27534916-27534552 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:376
               
               
               Alignm identity:245
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):49, 78

               
               
               Conread position:437-808
               
               
               Cow position:chr8:42152164-42151774 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:391
               
               
               Alignm identity:258
               
               
               Alignm E-value:9e-36
               
               
               Alignm gaps (pig, cow):89, 0

               
               
               Conread position:437-808
               
               
               Cow position:chr8:47889805-47890163 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:373
               
               
               Alignm identity:264
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):184, 190

               
               
               Conread position:437-809
               
               
               Cow position:chr8:42881058-42880694 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:374
               
               
               Alignm identity:273
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):224, 103

               
               
               Conread position:437-819
               
               
               Cow position:chr8:53320498-53320891 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:394
               
               
               Alignm identity:294
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):43, 0

               
               
               Conread position:437-836
               
               
               Cow position:chr8:11836494-11836888 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:408
               
               
               Alignm identity:296
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):224, 8

               
               
               Conread position:437-836
               
               
               Cow position:chr8:29012186-29012572 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:404
               
               
               Alignm identity:286
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):107, 100

               
               
               Conread position:437-850
               
               
               Cow position:chr8:1107673-1107251 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:436
               
               
               Alignm identity:288
               
               
               Alignm E-value:8e-34
               
               
               Alignm gaps (pig, cow):103, 29

               
               
               Conread position:437-850
               
               
               Cow position:chr8:47861403-47860999 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:417
               
               
               Alignm identity:305
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):35, 184

               
               
               Conread position:437-851
               
               
               Cow position:chr8:21206418-21206824 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:420
               
               
               Alignm identity:321
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):120, 101

               
               
               Conread position:437-854
               
               
               Cow position:chr8:22031096-22031500 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:421
               
               
               Alignm identity:285
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):224, 59

               
               
               Conread position:437-854
               
               
               Cow position:chr8:25627885-25628293 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:423
               
               
               Alignm identity:311
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):22, 26

               
               
               Conread position:437-854
               
               
               Cow position:chr8:41263850-41264250 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:423
               
               
               Alignm identity:282
               
               
               Alignm E-value:1e-37
               
               
               Alignm gaps (pig, cow):38, 76

               
               
               Conread position:437-860
               
               
               Cow position:chr8:21152334-21151921 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:427
               
               
               Alignm identity:292
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):224, 15

               
               
               Conread position:437-860
               
               
               Cow position:chr8:24390670-24390247 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:435
               
               
               Alignm identity:308
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):10, 29

               
               
               Conread position:437-860
               
               
               Cow position:chr8:38357958-38358380 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:425
               
               
               Alignm identity:305
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):225, 91

               
               
               Conread position:437-868
               
               
               Cow position:chr8:19302213-19302647 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:437
               
               
               Alignm identity:316
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):110, 100

               
               
               Conread position:437-932
               
               
               Cow position:chr8:24193519-24194008 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:501
               
               
               Alignm identity:349
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):110, 47

               
               
               Conread position:438-585
               
               
               Cow position:chr8:20040909-20040761 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:149
               
               
               Alignm identity:112
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):5, 0

               
               
               Conread position:438-646
               
               
               Cow position:chr8:36858605-36858396 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:214
               
               
               Alignm identity:164
               
               
               Alignm E-value:1e-38
               
               
               Alignm gaps (pig, cow):32, 14

               
               
               Conread position:438-653
               
               
               Cow position:chr8:26394610-26394827 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:227
               
               
               Alignm identity:164
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):102, 49

               
               
               Conread position:438-664
               
               
               Cow position:chr8:37391870-37391647 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:228
               
               
               Alignm identity:172
               
               
               Alignm E-value:1.99965e-42
               
               
               Alignm gaps (pig, cow):223, 181

               
               
               Conread position:438-668
               
               
               Cow position:chr8:28669914-28670145 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:233
               
               
               Alignm identity:191
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):204, 224

               
               
               Conread position:438-680
               
               
               Cow position:chr8:41720218-41719970 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:250
               
               
               Alignm identity:181
               
               
               Alignm E-value:1e-37
               
               
               Alignm gaps (pig, cow):37, 196

               
               
               Conread position:438-740
               
               
               Cow position:chr8:12453162-12453458 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:305
               
               
               Alignm identity:233
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):223, 120

               
               
               Conread position:438-741
               
               
               Cow position:chr8:32494659-32494946 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:310
               
               
               Alignm identity:217
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):104, 35

               
               
               Conread position:438-770
               
               
               Cow position:chr8:19866552-19866226 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:339
               
               
               Alignm identity:230
               
               
               Alignm E-value:3e-36
               
               
               Alignm gaps (pig, cow):99, 30

               
               
               Conread position:438-777
               
               
               Cow position:chr8:13737978-13738338 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:362
               
               
               Alignm identity:245
               
               
               Alignm E-value:1e-36
               
               
               Alignm gaps (pig, cow):50, 356

               
               
               Conread position:438-807
               
               
               Cow position:chr8:9624291-9624661 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:377
               
               
               Alignm identity:263
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):103, 266

               
               
               Conread position:438-807
               
               
               Cow position:chr8:21078064-21078437 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:378
               
               
               Alignm identity:272
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):97, 52

               
               
               Conread position:438-811
               
               
               Cow position:chr8:50412598-50412223 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:382
               
               
               Alignm identity:260
               
               
               Alignm E-value:2.8026e-45
               
               
               Alignm gaps (pig, cow):93, 127

               
               
               Conread position:438-823
               
               
               Cow position:chr8:8953220-8952833 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:389
               
               
               Alignm identity:282
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):109, 99

               
               
               Conread position:438-837
               
               
               Cow position:chr8:11477866-11478266 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:414
               
               
               Alignm identity:283
               
               
               Alignm E-value:5.99756e-43
               
               
               Alignm gaps (pig, cow):97, 140

               
               
               Conread position:438-851
               
               
               Cow position:chr8:47463521-47463935 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:417
               
               
               Alignm identity:298
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):109, 99

               
               
               Conread position:438-852
               
               
               Cow position:chr8:43478584-43478987 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:419
               
               
               Alignm identity:300
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):215, 176

               
               
               Conread position:438-867
               
               
               Cow position:chr8:31977625-31978046 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:435
               
               
               Alignm identity:305
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):109, 99

               
               
               Conread position:438-868
               
               
               Cow position:chr8:12445411-12444981 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:436
               
               
               Alignm identity:314
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):17, 31

               
               
               Conread position:438-871
               
               
               Cow position:chr8:51444453-51444035 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:437
               
               
               Alignm identity:305
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):223, 70

               
               
               Conread position:439-567
               
               
               Cow position:chr8:4564225-4564099 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:129
               
               
               Alignm identity:103
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):99, 0

               
               
               Conread position:439-592
               
               
               Cow position:chr8:35127811-35127658 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:155
               
               
               Alignm identity:120
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):108, 98

               
               
               Conread position:439-660
               
               
               Cow position:chr8:4784825-4784600 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:231
               
               
               Alignm identity:170
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):84, 10

               
               
               Conread position:439-661
               
               
               Cow position:chr8:1393486-1393712 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:229
               
               
               Alignm identity:161
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):85, 178

               
               
               Conread position:439-661
               
               
               Cow position:chr8:50315587-50315369 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:226
               
               
               Alignm identity:165
               
               
               Alignm E-value:7e-33
               
               
               Alignm gaps (pig, cow):135, 36

               
               
               Conread position:439-672
               
               
               Cow position:chr8:8914713-8914945 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:235
               
               
               Alignm identity:185
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):222, 29

               
               
               Conread position:439-694
               
               
               Cow position:chr8:56452652-56452391 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:263
               
               
               Alignm identity:179
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):90, 177

               
               
               Conread position:439-746
               
               
               Cow position:chr8:31835712-31836012 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:310
               
               
               Alignm identity:205
               
               
               Alignm E-value:5e-30
               
               
               Alignm gaps (pig, cow):105, 89

               
               
               Conread position:439-754
               
               
               Cow position:chr8:7410905-7410587 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:323
               
               
               Alignm identity:217
               
               
               Alignm E-value:3e-35
               
               
               Alignm gaps (pig, cow):93, 194

               
               
               Conread position:439-754
               
               
               Cow position:chr8:56424044-56423729 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:323
               
               
               Alignm identity:213
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):86, 29

               
               
               Conread position:439-772
               
               
               Cow position:chr8:30109800-30110139 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:342
               
               
               Alignm identity:239
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):84, 283

               
               
               Conread position:439-807
               
               
               Cow position:chr8:18791844-18791475 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:376
               
               
               Alignm identity:250
               
               
               Alignm E-value:4e-39
               
               
               Alignm gaps (pig, cow):87, 59

               
               
               Conread position:439-859
               
               
               Cow position:chr8:21224540-21224119 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:429
               
               
               Alignm identity:313
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):210, 250

               
               
               Conread position:439-860
               
               
               Cow position:chr8:2947203-2946780 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:425
               
               
               Alignm identity:304
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):108, 98

               
               
               Conread position:439-861
               
               
               Cow position:chr8:54051847-54052261 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:424
               
               
               Alignm identity:301
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):376, 21

               
               
               Conread position:439-862
               
               
               Cow position:chr8:12302992-12303402 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:428
               
               
               Alignm identity:294
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):222, 65

               
               
               Conread position:439-862
               
               
               Cow position:chr8:37090548-37090130 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:432
               
               
               Alignm identity:319
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):34, 58

               
               
               Conread position:439-867
               
               
               Cow position:chr8:1150262-1149836 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:433
               
               
               Alignm identity:308
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):108, 98

               
               
               Conread position:440-746
               
               
               Cow position:chr8:13150581-13150886 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:312
               
               
               Alignm identity:202
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):89, 172

               
               
               Conread position:440-770
               
               
               Cow position:chr8:672889-673214 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:331
               
               
               Alignm identity:244
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):19, 0

               
               
               Conread position:440-817
               
               
               Cow position:chr8:21948287-21947920 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:384
               
               
               Alignm identity:257
               
               
               Alignm E-value:3e-35
               
               
               Alignm gaps (pig, cow):94, 173

               
               
               Conread position:440-849
               
               
               Cow position:chr8:6794993-6795394 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:418
               
               
               Alignm identity:294
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):138, 40

               
               
               Conread position:441-759
               
               
               Cow position:chr8:6022112-6021781 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:333
               
               
               Alignm identity:231
               
               
               Alignm E-value:1.99993e-41
               
               
               Alignm gaps (pig, cow):101, 253

               
               
               Conread position:441-861
               
               
               Cow position:chr8:16030679-16030262 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:428
               
               
               Alignm identity:282
               
               
               Alignm E-value:2.00386e-43
               
               
               Alignm gaps (pig, cow):14, 176

               
               
               Conread position:442-586
               
               
               Cow position:chr8:43986539-43986682 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:145
               
               
               Alignm identity:109
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):117, 0

               
               
               Conread position:442-606
               
               
               Cow position:chr8:47466402-47466238 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:165
               
               
               Alignm identity:126
               
               
               Alignm E-value:6e-32
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:442-635
               
               
               Cow position:chr8:59656899-59656698 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:202
               
               
               Alignm identity:155
               
               
               Alignm E-value:1e-37
               
               
               Alignm gaps (pig, cow):87, 0

               
               
               Conread position:442-647
               
               
               Cow position:chr8:51303191-51303396 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:212
               
               
               Alignm identity:153
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):36, 127

               
               
               Conread position:442-653
               
               
               Cow position:chr8:23025937-23026147 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:212
               
               
               Alignm identity:156
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):74, 0

               
               
               Conread position:442-654
               
               
               Cow position:chr8:26228432-26228651 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:220
               
               
               Alignm identity:169
               
               
               Alignm E-value:6.00036e-42
               
               
               Alignm gaps (pig, cow):32, 0

               
               
               Conread position:442-667
               
               
               Cow position:chr8:1111447-1111673 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:229
               
               
               Alignm identity:176
               
               
               Alignm E-value:1.96182e-44
               
               
               Alignm gaps (pig, cow):81, 26

               
               
               Conread position:442-670
               
               
               Cow position:chr8:35505181-35504952 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:231
               
               
               Alignm identity:175
               
               
               Alignm E-value:1.96182e-44
               
               
               Alignm gaps (pig, cow):202, 40

               
               
               Conread position:442-677
               
               
               Cow position:chr8:51521854-51522090 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:238
               
               
               Alignm identity:194
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):105, 95

               
               
               Conread position:442-746
               
               
               Cow position:chr8:37132848-37133159 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:314
               
               
               Alignm identity:217
               
               
               Alignm E-value:4e-39
               
               
               Alignm gaps (pig, cow):91, 261

               
               
               Conread position:442-746
               
               
               Cow position:chr8:37977930-37977625 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:312
               
               
               Alignm identity:199
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):81, 210

               
               
               Conread position:442-754
               
               
               Cow position:chr8:19045099-19044786 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:317
               
               
               Alignm identity:215
               
               
               Alignm E-value:1e-37
               
               
               Alignm gaps (pig, cow):84, 52

               
               
               Conread position:442-775
               
               
               Cow position:chr8:22111998-22112332 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:340
               
               
               Alignm identity:250
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):185, 38

               
               
               Conread position:442-805
               
               
               Cow position:chr8:59217835-59218199 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:368
               
               
               Alignm identity:266
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):104, 95

               
               
               Conread position:442-806
               
               
               Cow position:chr8:34876699-34877064 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:373
               
               
               Alignm identity:242
               
               
               Alignm E-value:5e-31
               
               
               Alignm gaps (pig, cow):92, 170

               
               
               Conread position:442-807
               
               
               Cow position:chr8:8102029-8101672 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:373
               
               
               Alignm identity:249
               
               
               Alignm E-value:7e-33
               
               
               Alignm gaps (pig, cow):186, 120

               
               
               Conread position:442-808
               
               
               Cow position:chr8:46214522-46214176 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:373
               
               
               Alignm identity:253
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):65, 181

               
               
               Conread position:442-809
               
               
               Cow position:chr8:60489093-60488726 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:373
               
               
               Alignm identity:277
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):109, 228

               
               
               Conread position:442-810
               
               
               Cow position:chr8:21090340-21089970 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:372
               
               
               Alignm identity:277
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):105, 95

               
               
               Conread position:442-813
               
               
               Cow position:chr8:32967106-32967481 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:378
               
               
               Alignm identity:287
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):205, 244

               
               
               Conread position:442-828
               
               
               Cow position:chr8:42556710-42556320 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:400
               
               
               Alignm identity:281
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):34, 101

               
               
               Conread position:442-831
               
               
               Cow position:chr8:6569551-6569941 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:395
               
               
               Alignm identity:279
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):38, 196

               
               
               Conread position:442-831
               
               
               Cow position:chr8:31958172-31958550 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:392
               
               
               Alignm identity:290
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):218, 11

               
               
               Conread position:442-836
               
               
               Cow position:chr8:10739586-10739198 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:399
               
               
               Alignm identity:300
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):6, 11

               
               
               Conread position:442-836
               
               
               Cow position:chr8:20942385-20942781 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:399
               
               
               Alignm identity:288
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):219, 250

               
               
               Conread position:442-836
               
               
               Cow position:chr8:51702549-51702930 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:399
               
               
               Alignm identity:280
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):219, 87

               
               
               Conread position:442-836
               
               
               Cow position:chr8:54818508-54818115 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:398
               
               
               Alignm identity:294
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):219, 26

               
               
               Conread position:442-837
               
               
               Cow position:chr8:688714-688321 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:399
               
               
               Alignm identity:292
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):47, 99

               
               
               Conread position:442-847
               
               
               Cow position:chr8:24372174-24371779 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:408
               
               
               Alignm identity:297
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):218, 183

               
               
               Conread position:442-850
               
               
               Cow position:chr8:55502115-55502542 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:428
               
               
               Alignm identity:291
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):44, 0

               
               
               Conread position:442-851
               
               
               Cow position:chr8:30135459-30135862 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:425
               
               
               Alignm identity:285
               
               
               Alignm E-value:1e-36
               
               
               Alignm gaps (pig, cow):38, 206

               
               
               Conread position:442-853
               
               
               Cow position:chr8:23471083-23470671 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:415
               
               
               Alignm identity:289
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):219, 91

               
               
               Conread position:442-854
               
               
               Cow position:chr8:22376198-22375785 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:417
               
               
               Alignm identity:304
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):105, 26

               
               
               Conread position:442-859
               
               
               Cow position:chr8:25579076-25579486 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:422
               
               
               Alignm identity:309
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):68, 55

               
               
               Conread position:442-860
               
               
               Cow position:chr8:8873212-8872793 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:422
               
               
               Alignm identity:299
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):105, 95

               
               
               Conread position:442-860
               
               
               Cow position:chr8:15395315-15394910 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:423
               
               
               Alignm identity:310
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):38, 80

               
               
               Conread position:443-860
               
               
               Cow position:chr8:18729975-18730396 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:426
               
               
               Alignm identity:312
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):206, 75

               
               
               Conread position:444-626
               
               
               Cow position:chr8:6724852-6724670 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:183
               
               
               Alignm identity:136
               
               
               Alignm E-value:7e-33
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:444-669
               
               
               Cow position:chr8:26305040-26304821 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:227
               
               
               Alignm identity:167
               
               
               Alignm E-value:3e-35
               
               
               Alignm gaps (pig, cow):218, 66

               
               
               Conread position:444-697
               
               
               Cow position:chr8:39592039-39592282 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:256
               
               
               Alignm identity:197
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):217, 183

               
               
               Conread position:444-751
               
               
               Cow position:chr8:12800699-12801009 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:313
               
               
               Alignm identity:225
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):217, 156

               
               
               Conread position:444-809
               
               
               Cow position:chr8:49962215-49961850 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:379
               
               
               Alignm identity:247
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):80, 67

               
               
               Conread position:444-831
               
               
               Cow position:chr8:23677336-23677705 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:392
               
               
               Alignm identity:271
               
               
               Alignm E-value:2.00386e-43
               
               
               Alignm gaps (pig, cow):29, 69

               
               
               Conread position:444-851
               
               
               Cow position:chr8:40888655-40888257 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:410
               
               
               Alignm identity:290
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):217, 193

               
               
               Conread position:444-853
               
               
               Cow position:chr8:44849612-44849215 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:414
               
               
               Alignm identity:289
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):102, 96

               
               
               Conread position:444-854
               
               
               Cow position:chr8:8313447-8313035 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:420
               
               
               Alignm identity:296
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):54, 197

               
               
               Conread position:444-854
               
               
               Cow position:chr8:15165363-15165764 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:415
               
               
               Alignm identity:292
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):218, 238

               
               
               Conread position:445-619
               
               
               Cow position:chr8:48976822-48976999 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:178
               
               
               Alignm identity:126
               
               
               Alignm E-value:7e-23
               
               
               Alignm gaps (pig, cow):85, 0

               
               
               Conread position:445-641
               
               
               Cow position:chr8:60056701-60056503 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:203
               
               
               Alignm identity:144
               
               
               Alignm E-value:8e-24
               
               
               Alignm gaps (pig, cow):84, 48

               
               
               Conread position:445-661
               
               
               Cow position:chr8:33286330-33286558 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:230
               
               
               Alignm identity:160
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):41, 17

               
               
               Conread position:445-692
               
               
               Cow position:chr8:47578636-47578382 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:255
               
               
               Alignm identity:173
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):88, 0

               
               
               Conread position:445-743
               
               
               Cow position:chr8:11443163-11442859 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:307
               
               
               Alignm identity:195
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):44, 37

               
               
               Conread position:445-752
               
               
               Cow position:chr8:37466246-37466553 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:314
               
               
               Alignm identity:202
               
               
               Alignm E-value:8e-24
               
               
               Alignm gaps (pig, cow):26, 85

               
               
               Conread position:445-775
               
               
               Cow position:chr8:35556009-35555699 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:331
               
               
               Alignm identity:235
               
               
               Alignm E-value:2.8026e-45
               
               
               Alignm gaps (pig, cow):23, 0

               
               
               Conread position:445-778
               
               
               Cow position:chr8:55827636-55827965 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:334
               
               
               Alignm identity:242
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):107, 0

               
               
               Conread position:446-597
               
               
               Cow position:chr8:48513588-48513437 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:152
               
               
               Alignm identity:114
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:446-859
               
               
               Cow position:chr8:33693030-33693461 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:432
               
               
               Alignm identity:298
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):21, 0

               
               
               Conread position:446-876
               
               
               Cow position:chr8:797653-798081 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:439
               
               
               Alignm identity:276
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):64, 99

               
               
               Conread position:447-654
               
               
               Cow position:chr8:42786666-42786462 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:208
               
               
               Alignm identity:160
               
               
               Alignm E-value:4.99997e-41
               
               
               Alignm gaps (pig, cow):70, 0

               
               
               Conread position:447-667
               
               
               Cow position:chr8:47478929-47478716 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:221
               
               
               Alignm identity:169
               
               
               Alignm E-value:1.99993e-41
               
               
               Alignm gaps (pig, cow):121, 0

               
               
               Conread position:447-672
               
               
               Cow position:chr8:47666286-47666064 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:227
               
               
               Alignm identity:178
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):214, 21

               
               
               Conread position:447-696
               
               
               Cow position:chr8:52927473-52927219 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:260
               
               
               Alignm identity:176
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):17, 103

               
               
               Conread position:447-751
               
               
               Cow position:chr8:8879582-8879887 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:316
               
               
               Alignm identity:210
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):71, 26

               
               
               Conread position:447-762
               
               
               Cow position:chr8:12440768-12441081 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:324
               
               
               Alignm identity:219
               
               
               Alignm E-value:5e-31
               
               
               Alignm gaps (pig, cow):82, 134

               
               
               Conread position:447-810
               
               
               Cow position:chr8:8613405-8613770 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:367
               
               
               Alignm identity:270
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):100, 90

               
               
               Conread position:447-810
               
               
               Cow position:chr8:18081721-18082086 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:367
               
               
               Alignm identity:269
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):100, 90

               
               
               Conread position:447-851
               
               
               Cow position:chr8:36375959-36375568 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:408
               
               
               Alignm identity:287
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):26, 112

               
               
               Conread position:447-866
               
               
               Cow position:chr8:46834215-46833798 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:423
               
               
               Alignm identity:268
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):215, 15

               
               
               Conread position:448-660
               
               
               Cow position:chr8:31727028-31727240 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:219
               
               
               Alignm identity:167
               
               
               Alignm E-value:1e-36
               
               
               Alignm gaps (pig, cow):25, 48

               
               
               Conread position:448-684
               
               
               Cow position:chr8:53421726-53421938 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:237
               
               
               Alignm identity:177
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):71, 0

               
               
               Conread position:448-748
               
               
               Cow position:chr8:46952074-46952370 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:302
               
               
               Alignm identity:232
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):213, 111

               
               
               Conread position:449-660
               
               
               Cow position:chr8:16092791-16093003 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:215
               
               
               Alignm identity:168
               
               
               Alignm E-value:1.96182e-44
               
               
               Alignm gaps (pig, cow):36, 90

               
               
               Conread position:449-758
               
               
               Cow position:chr8:49940919-49940609 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:313
               
               
               Alignm identity:236
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):79, 8

               
               
               Conread position:449-848
               
               
               Cow position:chr8:33585755-33586153 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:405
               
               
               Alignm identity:279
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):94, 125

               
               
               Conread position:449-860
               
               
               Cow position:chr8:26600102-26600502 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:421
               
               
               Alignm identity:305
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):201, 33

               
               
               Conread position:450-590
               
               
               Cow position:chr8:39191905-39191765 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:142
               
               
               Alignm identity:110
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):97, 90

               
               
               Conread position:450-746
               
               
               Cow position:chr8:26008124-26008414 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:298
               
               
               Alignm identity:226
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):211, 30

               
               
               Conread position:450-836
               
               
               Cow position:chr8:51602892-51602504 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:391
               
               
               Alignm identity:281
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):212, 242

               
               
               Conread position:450-860
               
               
               Cow position:chr8:31266649-31266237 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:420
               
               
               Alignm identity:301
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):85, 310

               
               
               Conread position:450-872
               
               
               Cow position:chr8:60091484-60091057 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:429
               
               
               Alignm identity:291
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):211, 228

               
               
               Conread position:451-851
               
               
               Cow position:chr8:15972944-15972546 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:409
               
               
               Alignm identity:292
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):134, 193

               
               
               Conread position:452-754
               
               
               Cow position:chr8:16414247-16414545 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:304
               
               
               Alignm identity:231
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):209, 86

               
               
               Conread position:452-781
               
               
               Cow position:chr8:24987994-24988324 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:334
               
               
               Alignm identity:243
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):209, 150

               
               
               Conread position:452-808
               
               
               Cow position:chr8:11226091-11225745 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:357
               
               
               Alignm identity:231
               
               
               Alignm E-value:8e-34
               
               
               Alignm gaps (pig, cow):200, 0

               
               
               Conread position:452-837
               
               
               Cow position:chr8:45493439-45493814 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:392
               
               
               Alignm identity:290
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):209, 33

               
               
               Conread position:452-851
               
               
               Cow position:chr8:41747546-41747135 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:413
               
               
               Alignm identity:287
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):198, 376

               
               
               Conread position:452-853
               
               
               Cow position:chr8:52926175-52925773 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:410
               
               
               Alignm identity:293
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):127, 16

               
               
               Conread position:453-743
               
               
               Cow position:chr8:48084281-48084574 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:298
               
               
               Alignm identity:202
               
               
               Alignm E-value:6e-32
               
               
               Alignm gaps (pig, cow):76, 190

               
               
               Conread position:453-795
               
               
               Cow position:chr8:28379231-28378893 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:349
               
               
               Alignm identity:273
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):103, 243

               
               
               Conread position:454-608
               
               
               Cow position:chr8:59187525-59187684 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:161
               
               
               Alignm identity:118
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):75, 19

               
               
               Conread position:454-854
               
               
               Cow position:chr8:554625-554241 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:403
               
               
               Alignm identity:283
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):208, 36

               
               
               Conread position:455-854
               
               
               Cow position:chr8:38893556-38893953 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:407
               
               
               Alignm identity:299
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):91, 83

               
               
               Conread position:456-743
               
               
               Cow position:chr8:52230158-52229872 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:289
               
               
               Alignm identity:237
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):206, 177

               
               
               Conread position:456-754
               
               
               Cow position:chr8:16648839-16648535 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:307
               
               
               Alignm identity:213
               
               
               Alignm E-value:4e-39
               
               
               Alignm gaps (pig, cow):81, 241

               
               
               Conread position:457-836
               
               
               Cow position:chr8:7171373-7171754 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:383
               
               
               Alignm identity:275
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):90, 77

               
               
               Conread position:457-870
               
               
               Cow position:chr8:24980243-24980662 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:423
               
               
               Alignm identity:298
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):202, 276

               
               
               Conread position:458-851
               
               
               Cow position:chr8:51606965-51606571 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:399
               
               
               Alignm identity:279
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):89, 79

               
               
               Conread position:459-688
               
               
               Cow position:chr8:58590971-58590742 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:232
               
               
               Alignm identity:186
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):88, 58

               
               
               Conread position:459-807
               
               
               Cow position:chr8:29947982-29947647 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:350
               
               
               Alignm identity:252
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):325, 23

               
               
               Conread position:462-649
               
               
               Cow position:chr8:6955573-6955387 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:189
               
               
               Alignm identity:148
               
               
               Alignm E-value:1e-38
               
               
               Alignm gaps (pig, cow):37, 79

               
               
               Conread position:462-836
               
               
               Cow position:chr8:23501820-23501444 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:378
               
               
               Alignm identity:269
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):85, 75

               
               
               Conread position:462-836
               
               
               Cow position:chr8:35824436-35824821 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:390
               
               
               Alignm identity:285
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):87, 76

               
               
               Conread position:462-864
               
               
               Cow position:chr8:53965189-53964790 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:415
               
               
               Alignm identity:291
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):166, 78

               
               
               Conread position:463-661
               
               
               Cow position:chr8:6573866-6573660 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:207
               
               
               Alignm identity:142
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):54, 0

               
               
               Conread position:463-669
               
               
               Cow position:chr8:42749039-42749240 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:209
               
               
               Alignm identity:155
               
               
               Alignm E-value:6e-32
               
               
               Alignm gaps (pig, cow):89, 74

               
               
               Conread position:463-746
               
               
               Cow position:chr8:8278656-8278367 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:293
               
               
               Alignm identity:196
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):78, 231

               
               
               Conread position:463-762
               
               
               Cow position:chr8:54156649-54156952 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:310
               
               
               Alignm identity:225
               
               
               Alignm E-value:1.96182e-44
               
               
               Alignm gaps (pig, cow):66, 164

               
               
               Conread position:463-805
               
               
               Cow position:chr8:61123755-61123404 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:354
               
               
               Alignm identity:229
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):61, 271

               
               
               Conread position:463-813
               
               
               Cow position:chr8:966428-966781 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:358
               
               
               Alignm identity:254
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):70, 304

               
               
               Conread position:465-650
               
               
               Cow position:chr8:25572011-25572203 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:194
               
               
               Alignm identity:145
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):76, 61

               
               
               Conread position:465-661
               
               
               Cow position:chr8:58346345-58346532 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:149
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):11, 59

               
               
               Conread position:466-754
               
               
               Cow position:chr8:6446655-6446362 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:295
               
               
               Alignm identity:212
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):63, 82

               
               
               Conread position:466-860
               
               
               Cow position:chr8:36560508-36560119 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:397
               
               
               Alignm identity:276
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):194, 76

               
               
               Conread position:468-639
               
               
               Cow position:chr8:38897842-38898010 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:175
               
               
               Alignm identity:131
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):148, 101

               
               
               Conread position:468-653
               
               
               Cow position:chr8:32966118-32966308 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:192
               
               
               Alignm identity:141
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):61, 103

               
               
               Conread position:468-677
               
               
               Cow position:chr8:27821162-27821380 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:219
               
               
               Alignm identity:152
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):61, 0

               
               
               Conread position:468-736
               
               
               Cow position:chr8:3982365-3982633 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:270
               
               
               Alignm identity:204
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):193, 168

               
               
               Conread position:468-774
               
               
               Cow position:chr8:31703502-31703195 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:308
               
               
               Alignm identity:221
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):194, 0

               
               
               Conread position:468-777
               
               
               Cow position:chr8:25082047-25082355 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:311
               
               
               Alignm identity:231
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):193, 14

               
               
               Conread position:468-798
               
               
               Cow position:chr8:42442747-42443078 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:336
               
               
               Alignm identity:193
               
               
               Alignm E-value:2.00386e-43
               
               
               Alignm gaps (pig, cow):74, 6

               
               
               Conread position:468-801
               
               
               Cow position:chr8:28120295-28119954 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:345
               
               
               Alignm identity:230
               
               
               Alignm E-value:8e-34
               
               
               Alignm gaps (pig, cow):13, 182

               
               
               Conread position:468-807
               
               
               Cow position:chr8:11566872-11567218 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:353
               
               
               Alignm identity:237
               
               
               Alignm E-value:8e-34
               
               
               Alignm gaps (pig, cow):15, 305

               
               
               Conread position:468-831
               
               
               Cow position:chr8:18549415-18549050 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:368
               
               
               Alignm identity:264
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):80, 69

               
               
               Conread position:468-836
               
               
               Cow position:chr8:5511899-5511527 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:374
               
               
               Alignm identity:267
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):13, 71

               
               
               Conread position:468-838
               
               
               Cow position:chr8:20306539-20306912 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:383
               
               
               Alignm identity:277
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):188, 91

               
               
               Conread position:468-851
               
               
               Cow position:chr8:24237310-24237694 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:395
               
               
               Alignm identity:262
               
               
               Alignm E-value:1e-36
               
               
               Alignm gaps (pig, cow):58, 118

               
               
               Conread position:468-854
               
               
               Cow position:chr8:9688879-9689256 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:389
               
               
               Alignm identity:270
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):335, 186

               
               
               Conread position:468-854
               
               
               Cow position:chr8:38394752-38395139 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:390
               
               
               Alignm identity:283
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):193, 70

               
               
               Conread position:468-854
               
               
               Cow position:chr8:49284070-49283682 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:390
               
               
               Alignm identity:275
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):193, 352

               
               
               Conread position:468-860
               
               
               Cow position:chr8:7167970-7168363 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:400
               
               
               Alignm identity:286
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):79, 69

               
               
               Conread position:469-644
               
               
               Cow position:chr8:38776839-38776665 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:176
               
               
               Alignm identity:134
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):89, 0

               
               
               Conread position:469-660
               
               
               Cow position:chr8:6615401-6615202 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:200
               
               
               Alignm identity:139
               
               
               Alignm E-value:6e-22
               
               
               Alignm gaps (pig, cow):60, 0

               
               
               Conread position:469-836
               
               
               Cow position:chr8:18404186-18404549 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:373
               
               
               Alignm identity:263
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):24, 32

               
               
               Conread position:470-688
               
               
               Cow position:chr8:37217519-37217301 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:222
               
               
               Alignm identity:170
               
               
               Alignm E-value:1.99993e-41
               
               
               Alignm gaps (pig, cow):88, 169

               
               
               Conread position:470-806
               
               
               Cow position:chr8:11768734-11769063 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:338
               
               
               Alignm identity:227
               
               
               Alignm E-value:1e-37
               
               
               Alignm gaps (pig, cow):333, 263

               
               
               Conread position:470-836
               
               
               Cow position:chr8:45824461-45824832 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:374
               
               
               Alignm identity:270
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):191, 222

               
               
               Conread position:470-851
               
               
               Cow position:chr8:48211628-48211249 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:388
               
               
               Alignm identity:277
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):72, 49

               
               
               Conread position:471-661
               
               
               Cow position:chr8:35581085-35580904 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:191
               
               
               Alignm identity:143
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):9, 0

               
               
               Conread position:471-836
               
               
               Cow position:chr8:23038426-23038069 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:368
               
               
               Alignm identity:260
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):190, 238

               
               
               Conread position:472-648
               
               
               Cow position:chr8:18830950-18831125 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:177
               
               
               Alignm identity:146
               
               
               Alignm E-value:1.96182e-44
               
               
               Alignm gaps (pig, cow):91, 0

               
               
               Conread position:473-747
               
               
               Cow position:chr8:60989226-60989487 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:200
               
               
               Alignm E-value:3e-36
               
               
               Alignm gaps (pig, cow):9, 136

               
               
               Conread position:473-860
               
               
               Cow position:chr8:5485310-5484922 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:392
               
               
               Alignm identity:282
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):335, 129

               
               
               Conread position:474-652
               
               
               Cow position:chr8:48756708-48756526 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:132
               
               
               Alignm E-value:6e-22
               
               
               Alignm gaps (pig, cow):52, 102

               
               
               Conread position:475-602
               
               
               Cow position:chr8:2823065-2822938 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:129
               
               
               Alignm identity:99
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):73, 63

               
               
               Conread position:475-718
               
               
               Cow position:chr8:5451014-5450771 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:248
               
               
               Alignm identity:184
               
               
               Alignm E-value:6.00036e-42
               
               
               Alignm gaps (pig, cow):60, 96

               
               
               Conread position:475-764
               
               
               Cow position:chr8:49667749-49668033 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:296
               
               
               Alignm identity:196
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):57, 46

               
               
               Conread position:475-808
               
               
               Cow position:chr8:39936066-39936405 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:341
               
               
               Alignm identity:230
               
               
               Alignm E-value:2e-40
               
               
               Alignm gaps (pig, cow):47, 126

               
               
               Conread position:476-732
               
               
               Cow position:chr8:13322025-13321775 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:260
               
               
               Alignm identity:203
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):9, 58

               
               
               Conread position:476-810
               
               
               Cow position:chr8:1389294-1389626 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:338
               
               
               Alignm identity:240
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):71, 36

               
               
               Conread position:476-837
               
               
               Cow position:chr8:50404819-50405183 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:366
               
               
               Alignm identity:262
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):71, 61

               
               
               Conread position:477-685
               
               
               Cow position:chr8:55550148-55550359 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:215
               
               
               Alignm identity:157
               
               
               Alignm E-value:5e-31
               
               
               Alignm gaps (pig, cow):58, 172

               
               
               Conread position:477-754
               
               
               Cow position:chr8:35192286-35192559 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:179
               
               
               Alignm E-value:7e-23
               
               
               Alignm gaps (pig, cow):175, 47

               
               
               Conread position:477-754
               
               
               Cow position:chr8:35490343-35490068 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:200
               
               
               Alignm E-value:1.99965e-42
               
               
               Alignm gaps (pig, cow):70, 60

               
               
               Conread position:477-836
               
               
               Cow position:chr8:8393101-8392745 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:363
               
               
               Alignm identity:261
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):70, 60

               
               
               Conread position:477-836
               
               
               Cow position:chr8:39320221-39319856 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:372
               
               
               Alignm identity:265
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):36, 223

               
               
               Conread position:477-837
               
               
               Cow position:chr8:19601053-19601413 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:364
               
               
               Alignm identity:260
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):184, 284

               
               
               Conread position:478-851
               
               
               Cow position:chr8:56824456-56824071 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:393
               
               
               Alignm identity:263
               
               
               Alignm E-value:3e-36
               
               
               Alignm gaps (pig, cow):51, 87

               
               
               Conread position:478-860
               
               
               Cow position:chr8:3680107-3680491 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:387
               
               
               Alignm identity:268
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):71, 59

               
               
               Conread position:479-654
               
               
               Cow position:chr8:11611822-11611996 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:176
               
               
               Alignm identity:142
               
               
               Alignm E-value:4.99997e-41
               
               
               Alignm gaps (pig, cow):141, 0

               
               
               Conread position:479-666
               
               
               Cow position:chr8:53478866-53479051 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:191
               
               
               Alignm identity:155
               
               
               Alignm E-value:2e-40
               
               
               Alignm gaps (pig, cow):82, 41

               
               
               Conread position:479-810
               
               
               Cow position:chr8:27162525-27162189 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:338
               
               
               Alignm identity:236
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):164, 216

               
               
               Conread position:479-840
               
               
               Cow position:chr8:21324840-21325190 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:368
               
               
               Alignm identity:265
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):182, 90

               
               
               Conread position:479-860
               
               
               Cow position:chr8:25871295-25871678 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:393
               
               
               Alignm identity:266
               
               
               Alignm E-value:4.99997e-41
               
               
               Alignm gaps (pig, cow):57, 15

               
               
               Conread position:480-647
               
               
               Cow position:chr8:32988007-32988173 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:168
               
               
               Alignm identity:126
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):90, 0

               
               
               Conread position:480-649
               
               
               Cow position:chr8:35597992-35597824 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:170
               
               
               Alignm identity:129
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):161, 0

               
               
               Conread position:480-694
               
               
               Cow position:chr8:52631498-52631714 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:222
               
               
               Alignm identity:155
               
               
               Alignm E-value:9e-25
               
               
               Alignm gaps (pig, cow):46, 202

               
               
               Conread position:480-845
               
               
               Cow position:chr8:45245439-45245081 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:369
               
               
               Alignm identity:281
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):181, 130

               
               
               Conread position:480-867
               
               
               Cow position:chr8:8552901-8552511 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:391
               
               
               Alignm identity:276
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):181, 0

               
               
               Conread position:482-831
               
               
               Cow position:chr8:50283172-50282819 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:355
               
               
               Alignm identity:251
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):65, 58

               
               
               Conread position:482-836
               
               
               Cow position:chr8:5166374-5166013 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:364
               
               
               Alignm identity:256
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):55, 183

               
               
               Conread position:482-853
               
               
               Cow position:chr8:15800372-15799998 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:378
               
               
               Alignm identity:270
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):61, 242

               
               
               Conread position:483-745
               
               
               Cow position:chr8:11590502-11590768 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:272
               
               
               Alignm identity:190
               
               
               Alignm E-value:6e-32
               
               
               Alignm gaps (pig, cow):45, 11

               
               
               Conread position:483-851
               
               
               Cow position:chr8:19520466-19520833 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:373
               
               
               Alignm identity:266
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):64, 54

               
               
               Conread position:484-836
               
               
               Cow position:chr8:7250759-7250405 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:355
               
               
               Alignm identity:251
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):177, 0

               
               
               Conread position:484-852
               
               
               Cow position:chr8:12058291-12058665 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:376
               
               
               Alignm identity:280
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):177, 204

               
               
               Conread position:487-672
               
               
               Cow position:chr8:56795147-56795329 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:186
               
               
               Alignm identity:151
               
               
               Alignm E-value:2.00386e-43
               
               
               Alignm gaps (pig, cow):150, 0

               
               
               Conread position:487-759
               
               
               Cow position:chr8:53059177-53058897 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:189
               
               
               Alignm E-value:7e-23
               
               
               Alignm gaps (pig, cow):40, 30

               
               
               Conread position:487-808
               
               
               Cow position:chr8:10844980-10844658 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:330
               
               
               Alignm identity:214
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):54, 182

               
               
               Conread position:487-836
               
               
               Cow position:chr8:10786062-10786402 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:359
               
               
               Alignm identity:265
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):165, 26

               
               
               Conread position:487-836
               
               
               Cow position:chr8:25525596-25525948 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:354
               
               
               Alignm identity:257
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):174, 334

               
               
               Conread position:487-854
               
               
               Cow position:chr8:17103820-17103475 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:371
               
               
               Alignm identity:249
               
               
               Alignm E-value:5e-31
               
               
               Alignm gaps (pig, cow):117, 62

               
               
               Conread position:487-860
               
               
               Cow position:chr8:15391571-15391211 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:376
               
               
               Alignm identity:270
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):173, 210

               
               
               Conread position:487-860
               
               
               Cow position:chr8:53642850-53642468 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:385
               
               
               Alignm identity:274
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):170, 11

               
               
               Conread position:488-629
               
               
               Cow position:chr8:9682032-9681891 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:142
               
               
               Alignm identity:105
               
               
               Alignm E-value:7e-23
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:488-860
               
               
               Cow position:chr8:39144347-39144701 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:378
               
               
               Alignm identity:268
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):41, 175

               
               
               Conread position:488-862
               
               
               Cow position:chr8:47342316-47342689 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:379
               
               
               Alignm identity:285
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):173, 279

               
               
               Conread position:489-806
               
               
               Cow position:chr8:27677135-27676824 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:323
               
               
               Alignm identity:210
               
               
               Alignm E-value:9e-25
               
               
               Alignm gaps (pig, cow):37, 117

               
               
               Conread position:489-816
               
               
               Cow position:chr8:60324668-60324332 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:343
               
               
               Alignm identity:222
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):40, 166

               
               
               Conread position:489-838
               
               
               Cow position:chr8:10943154-10942803 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:356
               
               
               Alignm identity:267
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):33, 282

               
               
               Conread position:489-860
               
               
               Cow position:chr8:23179960-23179593 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:374
               
               
               Alignm identity:273
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):172, 148

               
               
               Conread position:489-867
               
               
               Cow position:chr8:58896252-58895872 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:383
               
               
               Alignm identity:268
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):58, 48

               
               
               Conread position:489-871
               
               
               Cow position:chr8:41697503-41697116 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:389
               
               
               Alignm identity:277
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):58, 48

               
               
               Conread position:490-823
               
               
               Cow position:chr8:2890125-2890459 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:338
               
               
               Alignm identity:208
               
               
               Alignm E-value:8.40779e-45
               
               
               Alignm gaps (pig, cow):57, 99

               
               
               Conread position:490-847
               
               
               Cow position:chr8:53429361-53429714 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:365
               
               
               Alignm identity:276
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):171, 129

               
               
               Conread position:490-867
               
               
               Cow position:chr8:26591253-26591633 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:382
               
               
               Alignm identity:269
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):57, 47

               
               
               Conread position:491-815
               
               
               Cow position:chr8:49054103-49053777 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:334
               
               
               Alignm identity:231
               
               
               Alignm E-value:4e-38
               
               
               Alignm gaps (pig, cow):35, 22

               
               
               Conread position:492-649
               
               
               Cow position:chr8:57470364-57470208 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:158
               
               
               Alignm identity:118
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):152, 0

               
               
               Conread position:492-675
               
               
               Cow position:chr8:39085027-39084844 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:151
               
               
               Alignm E-value:1.96182e-44
               
               
               Alignm gaps (pig, cow):170, 52

               
               
               Conread position:492-751
               
               
               Cow position:chr8:27286650-27286393 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:262
               
               
               Alignm identity:196
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):169, 123

               
               
               Conread position:492-754
               
               
               Cow position:chr8:56885906-56886172 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:200
               
               
               Alignm E-value:7.00649e-44
               
               
               Alignm gaps (pig, cow):145, 201

               
               
               Conread position:492-766
               
               
               Cow position:chr8:19637710-19637426 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:286
               
               
               Alignm identity:189
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):31, 177

               
               
               Conread position:492-769
               
               
               Cow position:chr8:30323915-30324191 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:221
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):158, 48

               
               
               Conread position:492-792
               
               
               Cow position:chr8:29499487-29499180 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:312
               
               
               Alignm identity:204
               
               
               Alignm E-value:8e-24
               
               
               Alignm gaps (pig, cow):35, 231

               
               
               Conread position:492-794
               
               
               Cow position:chr8:8651683-8651380 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:305
               
               
               Alignm identity:224
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):55, 45

               
               
               Conread position:492-805
               
               
               Cow position:chr8:37652314-37651999 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:317
               
               
               Alignm identity:234
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):55, 45

               
               
               Conread position:492-808
               
               
               Cow position:chr8:40030864-40030559 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:322
               
               
               Alignm identity:214
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):36, 66

               
               
               Conread position:492-810
               
               
               Cow position:chr8:16354798-16355115 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:322
               
               
               Alignm identity:231
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):55, 45

               
               
               Conread position:492-823
               
               
               Cow position:chr8:8066304-8065972 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:335
               
               
               Alignm identity:245
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):55, 45

               
               
               Conread position:492-836
               
               
               Cow position:chr8:12077171-12076825 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:349
               
               
               Alignm identity:243
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):55, 45

               
               
               Conread position:492-836
               
               
               Cow position:chr8:33897317-33896971 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:349
               
               
               Alignm identity:256
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):169, 200

               
               
               Conread position:492-947
               
               
               Cow position:chr8:41694010-41693564 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:459
               
               
               Alignm identity:305
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):55, 48

               
               
               Conread position:493-649
               
               
               Cow position:chr8:28295398-28295242 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:157
               
               
               Alignm identity:129
               
               
               Alignm E-value:1e-38
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:493-654
               
               
               Cow position:chr8:34662252-34662416 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:165
               
               
               Alignm identity:117
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):44, 0

               
               
               Conread position:493-654
               
               
               Cow position:chr8:49277736-49277579 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:162
               
               
               Alignm identity:129
               
               
               Alignm E-value:8e-34
               
               
               Alignm gaps (pig, cow):135, 0

               
               
               Conread position:493-754
               
               
               Cow position:chr8:56581604-56581349 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:264
               
               
               Alignm identity:199
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):167, 77

               
               
               Conread position:493-758
               
               
               Cow position:chr8:35274949-35275220 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:273
               
               
               Alignm identity:186
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):39, 15

               
               
               Conread position:493-851
               
               
               Cow position:chr8:38464598-38464957 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:365
               
               
               Alignm identity:269
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):121, 47

               
               
               Conread position:494-766
               
               
               Cow position:chr8:40109212-40109495 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:190
               
               
               Alignm E-value:4e-27
               
               
               Alignm gaps (pig, cow):29, 0

               
               
               Conread position:494-860
               
               
               Cow position:chr8:24497840-24498201 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:371
               
               
               Alignm identity:267
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):167, 178

               
               
               Conread position:495-813
               
               
               Cow position:chr8:53363256-53362944 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:319
               
               
               Alignm identity:234
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):152, 0

               
               
               Conread position:495-836
               
               
               Cow position:chr8:18635445-18635788 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:345
               
               
               Alignm identity:249
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):52, 42

               
               
               Conread position:496-669
               
               
               Cow position:chr8:27574827-27574652 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:177
               
               
               Alignm identity:137
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):153, 44

               
               
               Conread position:497-766
               
               
               Cow position:chr8:20311122-20311389 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:198
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):29, 147

               
               
               Conread position:498-741
               
               
               Cow position:chr8:1478444-1478209 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:244
               
               
               Alignm identity:175
               
               
               Alignm E-value:3e-35
               
               
               Alignm gaps (pig, cow):99, 0

               
               
               Conread position:498-854
               
               
               Cow position:chr8:10298146-10297790 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:360
               
               
               Alignm identity:247
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):19, 164

               
               
               Conread position:498-867
               
               
               Cow position:chr8:58354048-58354420 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:373
               
               
               Alignm identity:260
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):163, 0

               
               
               Conread position:499-619
               
               
               Cow position:chr8:59643191-59643071 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:121
               
               
               Alignm identity:95
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:500-823
               
               
               Cow position:chr8:4796390-4796695 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:217
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):162, 40

               
               
               Conread position:500-854
               
               
               Cow position:chr8:8006126-8006473 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:358
               
               
               Alignm identity:247
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):161, 75

               
               
               Conread position:501-862
               
               
               Cow position:chr8:51318566-51318927 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:365
               
               
               Alignm identity:259
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):157, 195

               
               
               Conread position:502-836
               
               
               Cow position:chr8:42113210-42112872 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:341
               
               
               Alignm identity:246
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):154, 301

               
               
               Conread position:503-836
               
               
               Cow position:chr8:23915239-23914904 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:337
               
               
               Alignm identity:240
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):44, 34

               
               
               Conread position:504-754
               
               
               Cow position:chr8:12499517-12499266 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:253
               
               
               Alignm identity:192
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):43, 33

               
               
               Conread position:504-858
               
               
               Cow position:chr8:6417621-6417269 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:360
               
               
               Alignm identity:261
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):157, 69

               
               
               Conread position:504-860
               
               
               Cow position:chr8:21960848-21961200 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:359
               
               
               Alignm identity:271
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):157, 196

               
               
               Conread position:505-694
               
               
               Cow position:chr8:27608070-27608259 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:192
               
               
               Alignm identity:157
               
               
               Alignm E-value:2.8026e-45
               
               
               Alignm gaps (pig, cow):95, 171

               
               
               Conread position:506-650
               
               
               Cow position:chr8:58619337-58619195 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:146
               
               
               Alignm identity:118
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):41, 34

               
               
               Conread position:506-796
               
               
               Cow position:chr8:39143591-39143880 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:293
               
               
               Alignm identity:188
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):34, 29

               
               
               Conread position:506-806
               
               
               Cow position:chr8:22154457-22154159 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:302
               
               
               Alignm identity:230
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):155, 258

               
               
               Conread position:506-823
               
               
               Cow position:chr8:18564385-18564062 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:326
               
               
               Alignm identity:232
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):155, 175

               
               
               Conread position:506-854
               
               
               Cow position:chr8:17909894-17909545 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:356
               
               
               Alignm identity:249
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):62, 37

               
               
               Conread position:507-851
               
               
               Cow position:chr8:39065812-39066156 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:348
               
               
               Alignm identity:255
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):154, 254

               
               
               Conread position:508-751
               
               
               Cow position:chr8:30582448-30582208 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:245
               
               
               Alignm identity:192
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):153, 164

               
               
               Conread position:508-854
               
               
               Cow position:chr8:2580059-2579709 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:354
               
               
               Alignm identity:249
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):20, 246

               
               
               Conread position:509-854
               
               
               Cow position:chr8:49221325-49221671 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:352
               
               
               Alignm identity:253
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):38, 31

               
               
               Conread position:510-672
               
               
               Cow position:chr8:1204816-1204974 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:165
               
               
               Alignm identity:126
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):143, 48

               
               
               Conread position:511-672
               
               
               Cow position:chr8:19448990-19449152 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:164
               
               
               Alignm identity:128
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):36, 26

               
               
               Conread position:511-858
               
               
               Cow position:chr8:1187542-1187869 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:353
               
               
               Alignm identity:246
               
               
               Alignm E-value:8e-35
               
               
               Alignm gaps (pig, cow):150, 100

               
               
               Conread position:512-837
               
               
               Cow position:chr8:13660658-13660962 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:326
               
               
               Alignm identity:225
               
               
               Alignm E-value:3e-36
               
               
               Alignm gaps (pig, cow):51, 0

               
               
               Conread position:513-836
               
               
               Cow position:chr8:14628805-14628480 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:328
               
               
               Alignm identity:235
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):34, 24

               
               
               Conread position:514-754
               
               
               Cow position:chr8:8227212-8226972 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:242
               
               
               Alignm identity:182
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):147, 167

               
               
               Conread position:514-867
               
               
               Cow position:chr8:1610412-1610056 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:358
               
               
               Alignm identity:243
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):33, 23

               
               
               Conread position:516-661
               
               
               Cow position:chr8:18762741-18762886 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:147
               
               
               Alignm identity:115
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):46, 95

               
               
               Conread position:516-851
               
               
               Cow position:chr8:10399923-10400244 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:337
               
               
               Alignm identity:240
               
               
               Alignm E-value:2.8026e-45
               
               
               Alignm gaps (pig, cow):198, 112

               
               
               Conread position:517-823
               
               
               Cow position:chr8:53886418-53886719 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:313
               
               
               Alignm identity:213
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):22, 129

               
               
               Conread position:517-837
               
               
               Cow position:chr8:39442067-39442403 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:340
               
               
               Alignm identity:240
               
               
               Alignm E-value:1.99965e-42
               
               
               Alignm gaps (pig, cow):141, 16

               
               
               Conread position:517-861
               
               
               Cow position:chr8:3150095-3149751 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:351
               
               
               Alignm identity:247
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):125, 216

               
               
               Conread position:517-873
               
               
               Cow position:chr8:44000869-44000525 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:358
               
               
               Alignm identity:254
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):145, 5

               
               
               Conread position:520-808
               
               
               Cow position:chr8:6753773-6753492 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:208
               
               
               Alignm E-value:4.99997e-41
               
               
               Alignm gaps (pig, cow):141, 117

               
               
               Conread position:520-858
               
               
               Cow position:chr8:55716369-55716707 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:342
               
               
               Alignm identity:244
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):141, 292

               
               
               Conread position:520-860
               
               
               Cow position:chr8:9230266-9229930 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:346
               
               
               Alignm identity:229
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):141, 24

               
               
               Conread position:521-811
               
               
               Cow position:chr8:41980380-41980672 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:295
               
               
               Alignm identity:211
               
               
               Alignm E-value:1.4013e-45
               
               
               Alignm gaps (pig, cow):26, 12

               
               
               Conread position:523-854
               
               
               Cow position:chr8:1135898-1135576 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:335
               
               
               Alignm identity:229
               
               
               Alignm E-value:1e-37
               
               
               Alignm gaps (pig, cow):137, 97

               
               
               Conread position:524-808
               
               
               Cow position:chr8:52863437-52863711 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:191
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):73, 0

               
               
               Conread position:524-851
               
               
               Cow position:chr8:16972912-16972584 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:332
               
               
               Alignm identity:246
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):137, 158

               
               
               Conread position:525-807
               
               
               Cow position:chr8:12720392-12720665 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:192
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):111, 18

               
               
               Conread position:526-682
               
               
               Cow position:chr8:38845878-38846035 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:158
               
               
               Alignm identity:127
               
               
               Alignm E-value:3e-35
               
               
               Alignm gaps (pig, cow):134, 0

               
               
               Conread position:526-721
               
               
               Cow position:chr8:45147757-45147944 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:196
               
               
               Alignm identity:138
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):95, 0

               
               
               Conread position:526-749
               
               
               Cow position:chr8:6656441-6656213 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:231
               
               
               Alignm identity:174
               
               
               Alignm E-value:1e-39
               
               
               Alignm gaps (pig, cow):123, 206

               
               
               Conread position:526-754
               
               
               Cow position:chr8:8561465-8561236 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:231
               
               
               Alignm identity:171
               
               
               Alignm E-value:2e-40
               
               
               Alignm gaps (pig, cow):21, 14

               
               
               Conread position:526-754
               
               
               Cow position:chr8:45777967-45778195 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:231
               
               
               Alignm identity:178
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):135, 175

               
               
               Conread position:526-828
               
               
               Cow position:chr8:38837966-38838265 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:310
               
               
               Alignm identity:224
               
               
               Alignm E-value:1.99993e-41
               
               
               Alignm gaps (pig, cow):21, 12

               
               
               Conread position:526-830
               
               
               Cow position:chr8:59987600-59987294 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:308
               
               
               Alignm identity:222
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):21, 11

               
               
               Conread position:526-836
               
               
               Cow position:chr8:4614414-4614102 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:314
               
               
               Alignm identity:222
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):21, 11

               
               
               Conread position:526-836
               
               
               Cow position:chr8:34071826-34072138 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:314
               
               
               Alignm identity:225
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):21, 11

               
               
               Conread position:526-836
               
               
               Cow position:chr8:54129242-54128931 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:314
               
               
               Alignm identity:223
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):21, 11

               
               
               Conread position:526-860
               
               
               Cow position:chr8:53822171-53822508 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:340
               
               
               Alignm identity:233
               
               
               Alignm E-value:7.00649e-44
               
               
               Alignm gaps (pig, cow):21, 11

               
               
               Conread position:526-861
               
               
               Cow position:chr8:46847360-46847032 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:338
               
               
               Alignm identity:213
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):135, 252

               
               
               Conread position:526-867
               
               
               Cow position:chr8:22162800-22162456 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:346
               
               
               Alignm identity:247
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):21, 11

               
               
               Conread position:527-808
               
               
               Cow position:chr8:29958051-29958321 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:204
               
               
               Alignm E-value:1e-39
               
               
               Alignm gaps (pig, cow):180, 20

               
               
               Conread position:527-860
               
               
               Cow position:chr8:23109000-23108665 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:338
               
               
               Alignm identity:242
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):21, 10

               
               
               Conread position:527-877
               
               
               Cow position:chr8:51482167-51481813 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:356
               
               
               Alignm identity:241
               
               
               Alignm E-value:8.40779e-45
               
               
               Alignm gaps (pig, cow):21, 10

               
               
               Conread position:528-746
               
               
               Cow position:chr8:17139795-17140016 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:226
               
               
               Alignm identity:153
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):121, 52

               
               
               Conread position:528-754
               
               
               Cow position:chr8:39808186-39808412 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:230
               
               
               Alignm identity:161
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):132, 61

               
               
               Conread position:528-836
               
               
               Cow position:chr8:38254633-38254949 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:318
               
               
               Alignm identity:228
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):57, 298

               
               
               Conread position:529-816
               
               
               Cow position:chr8:47678127-47678433 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:311
               
               
               Alignm identity:212
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):126, 49

               
               
               Conread position:529-837
               
               
               Cow position:chr8:51578884-51579199 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:317
               
               
               Alignm identity:226
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 281

               
               
               Conread position:529-848
               
               
               Cow position:chr8:16387416-16387735 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:232
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):129, 14

               
               
               Conread position:529-851
               
               
               Cow position:chr8:13809834-13810148 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:324
               
               
               Alignm identity:215
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):132, 224

               
               
               Conread position:529-862
               
               
               Cow position:chr8:17047137-17046809 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:336
               
               
               Alignm identity:237
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):132, 41

               
               
               Conread position:530-743
               
               
               Cow position:chr8:39010013-39009799 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:215
               
               
               Alignm identity:148
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):131, 0

               
               
               Conread position:531-670
               
               
               Cow position:chr8:7605651-7605511 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:142
               
               
               Alignm identity:116
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):16, 6

               
               
               Conread position:531-806
               
               
               Cow position:chr8:44127036-44127299 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:186
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):129, 90

               
               
               Conread position:531-860
               
               
               Cow position:chr8:29792870-29792531 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:341
               
               
               Alignm identity:236
               
               
               Alignm E-value:2.00386e-43
               
               
               Alignm gaps (pig, cow):16, 9

               
               
               Conread position:532-770
               
               
               Cow position:chr8:37541551-37541789 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:240
               
               
               Alignm identity:178
               
               
               Alignm E-value:7.00649e-44
               
               
               Alignm gaps (pig, cow):129, 140

               
               
               Conread position:532-831
               
               
               Cow position:chr8:51663747-51663453 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:303
               
               
               Alignm identity:200
               
               
               Alignm E-value:4e-27
               
               
               Alignm gaps (pig, cow):129, 144

               
               
               Conread position:533-764
               
               
               Cow position:chr8:1525072-1525298 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:233
               
               
               Alignm identity:170
               
               
               Alignm E-value:3e-35
               
               
               Alignm gaps (pig, cow):128, 47

               
               
               Conread position:534-751
               
               
               Cow position:chr8:608445-608228 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:220
               
               
               Alignm identity:170
               
               
               Alignm E-value:7.00649e-44
               
               
               Alignm gaps (pig, cow):127, 164

               
               
               Conread position:534-858
               
               
               Cow position:chr8:10699829-10699509 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:329
               
               
               Alignm identity:247
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):127, 164

               
               
               Conread position:534-860
               
               
               Cow position:chr8:6233270-6232947 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:329
               
               
               Alignm identity:251
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):124, 228

               
               
               Conread position:538-808
               
               
               Cow position:chr8:6585569-6585830 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:272
               
               
               Alignm identity:180
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):82, 142

               
               
               Conread position:538-861
               
               
               Cow position:chr8:46743720-46743385 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:345
               
               
               Alignm identity:239
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):111, 149

               
               
               Conread position:539-659
               
               
               Cow position:chr8:28239555-28239435 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:121
               
               
               Alignm identity:95
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:539-860
               
               
               Cow position:chr8:46623895-46623589 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:322
               
               
               Alignm identity:225
               
               
               Alignm E-value:4.99997e-41
               
               
               Alignm gaps (pig, cow):115, 0

               
               
               Conread position:540-676
               
               
               Cow position:chr8:1013767-1013905 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:139
               
               
               Alignm identity:112
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):7, 0

               
               
               Conread position:540-817
               
               
               Cow position:chr8:3433511-3433788 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:191
               
               
               Alignm E-value:1e-37
               
               
               Alignm gaps (pig, cow):269, 120

               
               
               Conread position:540-854
               
               
               Cow position:chr8:46567917-46567601 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:319
               
               
               Alignm identity:223
               
               
               Alignm E-value:2.8026e-45
               
               
               Alignm gaps (pig, cow):121, 152

               
               
               Conread position:542-821
               
               
               Cow position:chr8:58377926-58377651 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:286
               
               
               Alignm identity:202
               
               
               Alignm E-value:3e-35
               
               
               Alignm gaps (pig, cow):119, 82

               
               
               Conread position:543-807
               
               
               Cow position:chr8:55091558-55091835 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:184
               
               
               Alignm E-value:9e-25
               
               
               Alignm gaps (pig, cow):13, 0

               
               
               Conread position:543-869
               
               
               Cow position:chr8:6755312-6754991 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:329
               
               
               Alignm identity:225
               
               
               Alignm E-value:2e-40
               
               
               Alignm gaps (pig, cow):260, 101

               
               
               Conread position:544-732
               
               
               Cow position:chr8:19718720-19718540 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:190
               
               
               Alignm identity:147
               
               
               Alignm E-value:8e-34
               
               
               Alignm gaps (pig, cow):117, 77

               
               
               Conread position:544-746
               
               
               Cow position:chr8:1149237-1149042 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:203
               
               
               Alignm identity:142
               
               
               Alignm E-value:8e-24
               
               
               Alignm gaps (pig, cow):67, 0

               
               
               Conread position:544-751
               
               
               Cow position:chr8:46615760-46615968 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:211
               
               
               Alignm identity:154
               
               
               Alignm E-value:7e-33
               
               
               Alignm gaps (pig, cow):192, 100

               
               
               Conread position:544-758
               
               
               Cow position:chr8:35217989-35218203 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:219
               
               
               Alignm identity:155
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):67, 125

               
               
               Conread position:544-758
               
               
               Cow position:chr8:41418256-41418457 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:217
               
               
               Alignm identity:174
               
               
               Alignm E-value:5.99756e-43
               
               
               Alignm gaps (pig, cow):118, 82

               
               
               Conread position:544-801
               
               
               Cow position:chr8:59061310-59061563 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:260
               
               
               Alignm identity:177
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):118, 48

               
               
               Conread position:544-806
               
               
               Cow position:chr8:46842623-46842369 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:265
               
               
               Alignm identity:179
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):118, 76

               
               
               Conread position:544-807
               
               
               Cow position:chr8:5363719-5363455 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:190
               
               
               Alignm E-value:6.00036e-42
               
               
               Alignm gaps (pig, cow):117, 149

               
               
               Conread position:544-813
               
               
               Cow position:chr8:27955795-27955534 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:272
               
               
               Alignm identity:202
               
               
               Alignm E-value:2.00386e-43
               
               
               Alignm gaps (pig, cow):109, 87

               
               
               Conread position:544-830
               
               
               Cow position:chr8:36679389-36679102 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:289
               
               
               Alignm identity:204
               
               
               Alignm E-value:1.96182e-44
               
               
               Alignm gaps (pig, cow):117, 276

               
               
               Conread position:544-837
               
               
               Cow position:chr8:5449233-5448944 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:298
               
               
               Alignm identity:223
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):116, 143

               
               
               Conread position:544-851
               
               
               Cow position:chr8:35436976-35436672 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:310
               
               
               Alignm identity:205
               
               
               Alignm E-value:6e-32
               
               
               Alignm gaps (pig, cow):117, 137

               
               
               Conread position:544-853
               
               
               Cow position:chr8:4821589-4821283 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:314
               
               
               Alignm identity:222
               
               
               Alignm E-value:5.99756e-43
               
               
               Alignm gaps (pig, cow):77, 140

               
               
               Conread position:544-860
               
               
               Cow position:chr8:10802527-10802214 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:319
               
               
               Alignm identity:230
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):118, 77

               
               
               Conread position:544-861
               
               
               Cow position:chr8:17199800-17199482 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:232
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):7, 145

               
               
               Conread position:544-861
               
               
               Cow position:chr8:47550298-47549982 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:322
               
               
               Alignm identity:240
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):118, 223

               
               
               Conread position:545-654
               
               
               Cow position:chr8:820800-820691 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:110
               
               
               Alignm identity:88
               
               
               Alignm E-value:6e-22
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:546-675
               
               
               Cow position:chr8:55898373-55898246 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:130
               
               
               Alignm identity:102
               
               
               Alignm E-value:8e-24
               
               
               Alignm gaps (pig, cow):102, 0

               
               
               Conread position:546-758
               
               
               Cow position:chr8:47651219-47651010 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:214
               
               
               Alignm identity:155
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):115, 7

               
               
               Conread position:546-830
               
               
               Cow position:chr8:6853240-6853526 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:202
               
               
               Alignm E-value:1.96182e-44
               
               
               Alignm gaps (pig, cow):115, 0

               
               
               Conread position:546-836
               
               
               Cow position:chr8:3587428-3587137 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:294
               
               
               Alignm identity:211
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):115, 13

               
               
               Conread position:546-836
               
               
               Cow position:chr8:33802807-33803099 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:293
               
               
               Alignm identity:209
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):115, 0

               
               
               Conread position:546-847
               
               
               Cow position:chr8:61538200-61537903 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:206
               
               
               Alignm E-value:5e-31
               
               
               Alignm gaps (pig, cow):115, 13

               
               
               Conread position:546-851
               
               
               Cow position:chr8:9740249-9740555 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:308
               
               
               Alignm identity:213
               
               
               Alignm E-value:7.00649e-44
               
               
               Alignm gaps (pig, cow):115, 213

               
               
               Conread position:546-860
               
               
               Cow position:chr8:9834246-9833932 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:319
               
               
               Alignm identity:221
               
               
               Alignm E-value:6.00036e-42
               
               
               Alignm gaps (pig, cow):100, 91

               
               
               Conread position:546-866
               
               
               Cow position:chr8:4613349-4613026 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:324
               
               
               Alignm identity:224
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):115, 0

               
               
               Conread position:547-762
               
               
               Cow position:chr8:38851529-38851741 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:217
               
               
               Alignm identity:164
               
               
               Alignm E-value:1e-39
               
               
               Alignm gaps (pig, cow):115, 5

               
               
               Conread position:547-861
               
               
               Cow position:chr8:12795447-12795765 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:327
               
               
               Alignm identity:227
               
               
               Alignm E-value:9e-36
               
               
               Alignm gaps (pig, cow):84, 160

               
               
               Conread position:548-688
               
               
               Cow position:chr8:50035158-50035298 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:142
               
               
               Alignm identity:114
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):113, 11

               
               
               Conread position:549-869
               
               
               Cow position:chr8:18648444-18648124 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:233
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):112, 132

               
               
               Conread position:550-667
               
               
               Cow position:chr8:31763398-31763281 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:119
               
               
               Alignm identity:95
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):110, 61

               
               
               Conread position:550-837
               
               
               Cow position:chr8:21221845-21222129 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:295
               
               
               Alignm identity:226
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):104, 150

               
               
               Conread position:550-860
               
               
               Cow position:chr8:58183665-58183356 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:313
               
               
               Alignm identity:230
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):112, 226

               
               
               Conread position:550-862
               
               
               Cow position:chr8:6682281-6681963 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:321
               
               
               Alignm identity:234
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):40, 220

               
               
               Conread position:551-747
               
               
               Cow position:chr8:7610281-7610085 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:198
               
               
               Alignm identity:148
               
               
               Alignm E-value:3e-35
               
               
               Alignm gaps (pig, cow):110, 77

               
               
               Conread position:551-830
               
               
               Cow position:chr8:43903412-43903687 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:203
               
               
               Alignm E-value:4e-38
               
               
               Alignm gaps (pig, cow):110, 151

               
               
               Conread position:551-836
               
               
               Cow position:chr8:48080023-48079745 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:198
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):252, 8

               
               
               Conread position:551-860
               
               
               Cow position:chr8:48528314-48528013 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:320
               
               
               Alignm identity:230
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):35, 96

               
               
               Conread position:552-694
               
               
               Cow position:chr8:27681570-27681711 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:143
               
               
               Alignm identity:119
               
               
               Alignm E-value:8e-35
               
               
               Alignm gaps (pig, cow):108, 0

               
               
               Conread position:552-762
               
               
               Cow position:chr8:783394-783185 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:213
               
               
               Alignm identity:160
               
               
               Alignm E-value:1e-36
               
               
               Alignm gaps (pig, cow):109, 13

               
               
               Conread position:552-851
               
               
               Cow position:chr8:47155303-47155001 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:304
               
               
               Alignm identity:212
               
               
               Alignm E-value:5.99756e-43
               
               
               Alignm gaps (pig, cow):109, 269

               
               
               Conread position:553-652
               
               
               Cow position:chr8:34477536-34477635 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:100
               
               
               Alignm identity:83
               
               
               Alignm E-value:6e-22
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:553-754
               
               
               Cow position:chr8:55245725-55245522 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:204
               
               
               Alignm identity:147
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):107, 0

               
               
               Conread position:553-860
               
               
               Cow position:chr8:23121245-23121551 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:311
               
               
               Alignm identity:211
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):108, 187

               
               
               Conread position:554-867
               
               
               Cow position:chr8:26894895-26895210 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:317
               
               
               Alignm identity:218
               
               
               Alignm E-value:2.00386e-43
               
               
               Alignm gaps (pig, cow):108, 286

               
               
               Conread position:555-679
               
               
               Cow position:chr8:40889860-40889734 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:127
               
               
               Alignm identity:98
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):15, 0

               
               
               Conread position:555-758
               
               
               Cow position:chr8:11637774-11637972 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:205
               
               
               Alignm identity:144
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):106, 82

               
               
               Conread position:555-877
               
               
               Cow position:chr8:50814442-50814117 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:327
               
               
               Alignm identity:219
               
               
               Alignm E-value:1e-38
               
               
               Alignm gaps (pig, cow):106, 137

               
               
               Conread position:556-745
               
               
               Cow position:chr8:45287677-45287487 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:191
               
               
               Alignm identity:156
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):105, 0

               
               
               Conread position:556-807
               
               
               Cow position:chr8:61567716-61567469 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:253
               
               
               Alignm identity:188
               
               
               Alignm E-value:1.96182e-44
               
               
               Alignm gaps (pig, cow):106, 43

               
               
               Conread position:556-830
               
               
               Cow position:chr8:36344641-36344349 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:295
               
               
               Alignm identity:207
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):62, 140

               
               
               Conread position:557-759
               
               
               Cow position:chr8:642906-642703 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:205
               
               
               Alignm identity:157
               
               
               Alignm E-value:1e-39
               
               
               Alignm gaps (pig, cow):7, 72

               
               
               Conread position:557-836
               
               
               Cow position:chr8:11823636-11823917 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:198
               
               
               Alignm E-value:5.99756e-43
               
               
               Alignm gaps (pig, cow):104, 0

               
               
               Conread position:557-854
               
               
               Cow position:chr8:18433462-18433171 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:301
               
               
               Alignm identity:204
               
               
               Alignm E-value:6e-32
               
               
               Alignm gaps (pig, cow):104, 202

               
               
               Conread position:558-854
               
               
               Cow position:chr8:38789216-38789507 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:300
               
               
               Alignm identity:220
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):100, 195

               
               
               Conread position:559-729
               
               
               Cow position:chr8:4938238-4938068 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:172
               
               
               Alignm identity:120
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):103, 123

               
               
               Conread position:559-751
               
               
               Cow position:chr8:45133173-45133366 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:195
               
               
               Alignm identity:144
               
               
               Alignm E-value:6e-32
               
               
               Alignm gaps (pig, cow):102, 133

               
               
               Conread position:559-773
               
               
               Cow position:chr8:51675230-51675445 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:217
               
               
               Alignm identity:154
               
               
               Alignm E-value:5e-31
               
               
               Alignm gaps (pig, cow):13, 123

               
               
               Conread position:559-810
               
               
               Cow position:chr8:43241201-43241454 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:254
               
               
               Alignm identity:182
               
               
               Alignm E-value:4.99997e-41
               
               
               Alignm gaps (pig, cow):102, 0

               
               
               Conread position:559-810
               
               
               Cow position:chr8:51662651-51662398 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:254
               
               
               Alignm identity:182
               
               
               Alignm E-value:4.99997e-41
               
               
               Alignm gaps (pig, cow):102, 0

               
               
               Conread position:560-688
               
               
               Cow position:chr8:34233581-34233710 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:130
               
               
               Alignm identity:104
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):101, 0

               
               
               Conread position:560-851
               
               
               Cow position:chr8:59477677-59477969 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:294
               
               
               Alignm identity:202
               
               
               Alignm E-value:5e-40
               
               
               Alignm gaps (pig, cow):101, 118

               
               
               Conread position:560-860
               
               
               Cow position:chr8:20384444-20384730 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:304
               
               
               Alignm identity:206
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):90, 29

               
               
               Conread position:560-861
               
               
               Cow position:chr8:538259-537965 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:304
               
               
               Alignm identity:216
               
               
               Alignm E-value:5.99756e-43
               
               
               Alignm gaps (pig, cow):103, 53

               
               
               Conread position:561-688
               
               
               Cow position:chr8:51483978-51483849 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:130
               
               
               Alignm identity:105
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):11, 0

               
               
               Conread position:561-758
               
               
               Cow position:chr8:23148380-23148182 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:135
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):101, 0

               
               
               Conread position:561-779
               
               
               Cow position:chr8:43729545-43729332 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:220
               
               
               Alignm identity:149
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):198, 82

               
               
               Conread position:561-794
               
               
               Cow position:chr8:13743782-13744014 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:236
               
               
               Alignm identity:167
               
               
               Alignm E-value:7e-33
               
               
               Alignm gaps (pig, cow):100, 159

               
               
               Conread position:561-860
               
               
               Cow position:chr8:32622333-32622030 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:305
               
               
               Alignm identity:209
               
               
               Alignm E-value:1e-38
               
               
               Alignm gaps (pig, cow):9, 261

               
               
               Conread position:562-754
               
               
               Cow position:chr8:39008218-39008410 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:194
               
               
               Alignm identity:137
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):99, 158

               
               
               Conread position:562-806
               
               
               Cow position:chr8:45170717-45170465 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:256
               
               
               Alignm identity:176
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):99, 110

               
               
               Conread position:562-837
               
               
               Cow position:chr8:4563780-4563496 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:286
               
               
               Alignm identity:201
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):18, 251

               
               
               Conread position:562-851
               
               
               Cow position:chr8:9705265-9705548 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:295
               
               
               Alignm identity:218
               
               
               Alignm E-value:1.96182e-44
               
               
               Alignm gaps (pig, cow):97, 75

               
               
               Conread position:562-867
               
               
               Cow position:chr8:53957030-53957338 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:309
               
               
               Alignm identity:211
               
               
               Alignm E-value:1.99993e-41
               
               
               Alignm gaps (pig, cow):99, 0

               
               
               Conread position:563-769
               
               
               Cow position:chr8:33974231-33974436 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:208
               
               
               Alignm identity:156
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):98, 118

               
               
               Conread position:563-836
               
               
               Cow position:chr8:2621377-2621654 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:200
               
               
               Alignm E-value:5.99756e-43
               
               
               Alignm gaps (pig, cow):98, 220

               
               
               Conread position:563-854
               
               
               Cow position:chr8:27296061-27296354 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:295
               
               
               Alignm identity:208
               
               
               Alignm E-value:1.96182e-44
               
               
               Alignm gaps (pig, cow):98, 257

               
               
               Conread position:565-741
               
               
               Cow position:chr8:32132911-32133089 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:179
               
               
               Alignm identity:141
               
               
               Alignm E-value:1e-37
               
               
               Alignm gaps (pig, cow):96, 0

               
               
               Conread position:565-852
               
               
               Cow position:chr8:3887024-3887307 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:210
               
               
               Alignm E-value:1.96182e-44
               
               
               Alignm gaps (pig, cow):97, 27

               
               
               Conread position:565-853
               
               
               Cow position:chr8:5176851-5177129 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:292
               
               
               Alignm identity:214
               
               
               Alignm E-value:2.00386e-43
               
               
               Alignm gaps (pig, cow):98, 48

               
               
               Conread position:566-815
               
               
               Cow position:chr8:28354084-28354330 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:251
               
               
               Alignm identity:180
               
               
               Alignm E-value:1e-38
               
               
               Alignm gaps (pig, cow):95, 188

               
               
               Conread position:566-860
               
               
               Cow position:chr8:58463497-58463789 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:299
               
               
               Alignm identity:195
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):95, 11

               
               
               Conread position:569-810
               
               
               Cow position:chr8:33984264-33984020 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:246
               
               
               Alignm identity:177
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):92, 5

               
               
               Conread position:570-813
               
               
               Cow position:chr8:11974441-11974677 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:247
               
               
               Alignm identity:168
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):90, 42

               
               
               Conread position:570-836
               
               
               Cow position:chr8:9476040-9476309 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:185
               
               
               Alignm E-value:7e-33
               
               
               Alignm gaps (pig, cow):90, 249

               
               
               Conread position:570-854
               
               
               Cow position:chr8:9421521-9421236 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:199
               
               
               Alignm E-value:4e-38
               
               
               Alignm gaps (pig, cow):91, 156

               
               
               Conread position:572-737
               
               
               Cow position:chr8:15186953-15187122 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:172
               
               
               Alignm identity:130
               
               
               Alignm E-value:9e-25
               
               
               Alignm gaps (pig, cow):11, 111

               
               
               Conread position:573-688
               
               
               Cow position:chr8:8640617-8640501 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:117
               
               
               Alignm identity:100
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):88, 0

               
               
               Conread position:573-736
               
               
               Cow position:chr8:3328609-3328779 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:171
               
               
               Alignm identity:128
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):88, 0

               
               
               Conread position:573-807
               
               
               Cow position:chr8:55829667-55829438 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:236
               
               
               Alignm identity:165
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):89, 38

               
               
               Conread position:573-836
               
               
               Cow position:chr8:29469928-29469663 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:186
               
               
               Alignm E-value:4e-39
               
               
               Alignm gaps (pig, cow):88, 0

               
               
               Conread position:573-836
               
               
               Cow position:chr8:53447980-53447713 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:269
               
               
               Alignm identity:187
               
               
               Alignm E-value:3e-35
               
               
               Alignm gaps (pig, cow):77, 249

               
               
               Conread position:573-837
               
               
               Cow position:chr8:32311511-32311778 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:270
               
               
               Alignm identity:199
               
               
               Alignm E-value:2.8026e-45
               
               
               Alignm gaps (pig, cow):88, 105

               
               
               Conread position:573-854
               
               
               Cow position:chr8:11593604-11593321 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:193
               
               
               Alignm E-value:8e-35
               
               
               Alignm gaps (pig, cow):88, 247

               
               
               Conread position:573-860
               
               
               Cow position:chr8:22967973-22967684 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:198
               
               
               Alignm E-value:4e-39
               
               
               Alignm gaps (pig, cow):88, 0

               
               
               Conread position:573-860
               
               
               Cow position:chr8:51031698-51031413 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:293
               
               
               Alignm identity:204
               
               
               Alignm E-value:3e-35
               
               
               Alignm gaps (pig, cow):88, 120

               
               
               Conread position:573-867
               
               
               Cow position:chr8:61953584-61953290 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:299
               
               
               Alignm identity:204
               
               
               Alignm E-value:3e-35
               
               
               Alignm gaps (pig, cow):88, 115

               
               
               Conread position:574-836
               
               
               Cow position:chr8:11604196-11604467 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:275
               
               
               Alignm identity:197
               
               
               Alignm E-value:8e-35
               
               
               Alignm gaps (pig, cow):87, 118

               
               
               Conread position:574-836
               
               
               Cow position:chr8:36250877-36250615 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:265
               
               
               Alignm identity:182
               
               
               Alignm E-value:8e-34
               
               
               Alignm gaps (pig, cow):88, 11

               
               
               Conread position:575-736
               
               
               Cow position:chr8:31795367-31795203 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:165
               
               
               Alignm identity:128
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):86, 0

               
               
               Conread position:575-751
               
               
               Cow position:chr8:8320576-8320750 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:179
               
               
               Alignm identity:128
               
               
               Alignm E-value:6e-22
               
               
               Alignm gaps (pig, cow):86, 107

               
               
               Conread position:575-754
               
               
               Cow position:chr8:24513468-24513289 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:181
               
               
               Alignm identity:148
               
               
               Alignm E-value:2.00386e-43
               
               
               Alignm gaps (pig, cow):87, 17

               
               
               Conread position:575-787
               
               
               Cow position:chr8:26405057-26404856 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:213
               
               
               Alignm identity:164
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):53, 0

               
               
               Conread position:575-830
               
               
               Cow position:chr8:8482266-8482013 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:260
               
               
               Alignm identity:180
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):87, 173

               
               
               Conread position:575-860
               
               
               Cow position:chr8:1372319-1372605 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:191
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):86, 184

               
               
               Conread position:576-819
               
               
               Cow position:chr8:22183241-22183486 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:246
               
               
               Alignm identity:190
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):85, 0

               
               
               Conread position:576-835
               
               
               Cow position:chr8:20355091-20354835 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:262
               
               
               Alignm identity:191
               
               
               Alignm E-value:4.99997e-41
               
               
               Alignm gaps (pig, cow):85, 112

               
               
               Conread position:576-854
               
               
               Cow position:chr8:26386549-26386274 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:197
               
               
               Alignm E-value:5e-31
               
               
               Alignm gaps (pig, cow):75, 160

               
               
               Conread position:577-775
               
               
               Cow position:chr8:39097039-39096839 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:201
               
               
               Alignm identity:147
               
               
               Alignm E-value:7e-33
               
               
               Alignm gaps (pig, cow):14, 0

               
               
               Conread position:577-836
               
               
               Cow position:chr8:5532357-5532101 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:264
               
               
               Alignm identity:190
               
               
               Alignm E-value:3e-36
               
               
               Alignm gaps (pig, cow):84, 104

               
               
               Conread position:577-860
               
               
               Cow position:chr8:20294611-20294890 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:190
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):124, 114

               
               
               Conread position:580-808
               
               
               Cow position:chr8:43986538-43986317 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:230
               
               
               Alignm identity:175
               
               
               Alignm E-value:4.99997e-41
               
               
               Alignm gaps (pig, cow):81, 173

               
               
               Conread position:580-854
               
               
               Cow position:chr8:21268847-21268579 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:198
               
               
               Alignm E-value:1e-38
               
               
               Alignm gaps (pig, cow):82, 57

               
               
               Conread position:581-715
               
               
               Cow position:chr8:3579731-3579596 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:136
               
               
               Alignm identity:111
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):80, 0

               
               
               Conread position:581-775
               
               
               Cow position:chr8:1518225-1518029 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:198
               
               
               Alignm identity:142
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):80, 39

               
               
               Conread position:581-811
               
               
               Cow position:chr8:44125909-44126134 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:233
               
               
               Alignm identity:161
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):64, 149

               
               
               Conread position:582-867
               
               
               Cow position:chr8:3585411-3585699 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:199
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):80, 240

               
               
               Conread position:583-756
               
               
               Cow position:chr8:1666369-1666198 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:174
               
               
               Alignm identity:126
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):89, 0

               
               
               Conread position:583-850
               
               
               Cow position:chr8:45687993-45687732 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:193
               
               
               Alignm E-value:3e-36
               
               
               Alignm gaps (pig, cow):79, 171

               
               
               Conread position:584-836
               
               
               Cow position:chr8:14893513-14893269 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:256
               
               
               Alignm identity:176
               
               
               Alignm E-value:9e-25
               
               
               Alignm gaps (pig, cow):78, 8

               
               
               Conread position:584-870
               
               
               Cow position:chr8:55208282-55208570 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:294
               
               
               Alignm identity:203
               
               
               Alignm E-value:8e-34
               
               
               Alignm gaps (pig, cow):78, 53

               
               
               Conread position:585-750
               
               
               Cow position:chr8:51695113-51694955 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:167
               
               
               Alignm identity:126
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):76, 108

               
               
               Conread position:585-771
               
               
               Cow position:chr8:27366693-27366508 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:188
               
               
               Alignm identity:134
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):75, 102

               
               
               Conread position:585-837
               
               
               Cow position:chr8:38797115-38797364 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:184
               
               
               Alignm E-value:5e-30
               
               
               Alignm gaps (pig, cow):77, 46

               
               
               Conread position:585-854
               
               
               Cow position:chr8:10176470-10176196 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:200
               
               
               Alignm E-value:1.99965e-42
               
               
               Alignm gaps (pig, cow):66, 102

               
               
               Conread position:585-854
               
               
               Cow position:chr8:38572598-38572326 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:203
               
               
               Alignm E-value:5.99756e-43
               
               
               Alignm gaps (pig, cow):77, 57

               
               
               Conread position:585-860
               
               
               Cow position:chr8:58519981-58520243 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:199
               
               
               Alignm E-value:4e-27
               
               
               Alignm gaps (pig, cow):69, 13

               
               
               Conread position:585-975
               
               
               Cow position:chr8:35452042-35452433 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:393
               
               
               Alignm identity:188
               
               
               Alignm E-value:8e-34
               
               
               Alignm gaps (pig, cow):76, 379

               
               
               Conread position:587-810
               
               
               Cow position:chr8:26611413-26611188 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:226
               
               
               Alignm identity:163
               
               
               Alignm E-value:3e-36
               
               
               Alignm gaps (pig, cow):74, 0

               
               
               Conread position:587-827
               
               
               Cow position:chr8:34599814-34600055 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:244
               
               
               Alignm identity:182
               
               
               Alignm E-value:5.99756e-43
               
               
               Alignm gaps (pig, cow):74, 88

               
               
               Conread position:588-724
               
               
               Cow position:chr8:60126518-60126652 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:138
               
               
               Alignm identity:107
               
               
               Alignm E-value:7e-23
               
               
               Alignm gaps (pig, cow):73, 7

               
               
               Conread position:588-793
               
               
               Cow position:chr8:49279496-49279702 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:208
               
               
               Alignm identity:148
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):73, 93

               
               
               Conread position:588-851
               
               
               Cow position:chr8:50937469-50937726 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:188
               
               
               Alignm E-value:5e-31
               
               
               Alignm gaps (pig, cow):73, 88

               
               
               Conread position:588-855
               
               
               Cow position:chr8:35457160-35456896 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:272
               
               
               Alignm identity:198
               
               
               Alignm E-value:2e-40
               
               
               Alignm gaps (pig, cow):74, 35

               
               
               Conread position:588-860
               
               
               Cow position:chr8:9517498-9517227 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:276
               
               
               Alignm identity:184
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):74, 55

               
               
               Conread position:589-852
               
               
               Cow position:chr8:50898417-50898677 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:197
               
               
               Alignm E-value:2.8026e-45
               
               
               Alignm gaps (pig, cow):72, 165

               
               
               Conread position:590-836
               
               
               Cow position:chr8:25380504-25380256 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:249
               
               
               Alignm identity:176
               
               
               Alignm E-value:1e-37
               
               
               Alignm gaps (pig, cow):72, 0

               
               
               Conread position:590-850
               
               
               Cow position:chr8:580391-580137 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:264
               
               
               Alignm identity:188
               
               
               Alignm E-value:8e-35
               
               
               Alignm gaps (pig, cow):47, 83

               
               
               Conread position:590-851
               
               
               Cow position:chr8:24832056-24832316 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:194
               
               
               Alignm E-value:1.99993e-41
               
               
               Alignm gaps (pig, cow):71, 165

               
               
               Conread position:591-823
               
               
               Cow position:chr8:11377899-11378132 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:238
               
               
               Alignm identity:159
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):63, 93

               
               
               Conread position:592-853
               
               
               Cow position:chr8:38973372-38973635 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:265
               
               
               Alignm identity:189
               
               
               Alignm E-value:2e-40
               
               
               Alignm gaps (pig, cow):72, 228

               
               
               Conread position:592-860
               
               
               Cow position:chr8:25455092-25455358 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:189
               
               
               Alignm E-value:9e-36
               
               
               Alignm gaps (pig, cow):71, 90

               
               
               Conread position:592-861
               
               
               Cow position:chr8:48513311-48513057 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:273
               
               
               Alignm identity:197
               
               
               Alignm E-value:6e-32
               
               
               Alignm gaps (pig, cow):70, 29

               
               
               Conread position:592-870
               
               
               Cow position:chr8:35828119-35827847 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:209
               
               
               Alignm E-value:2e-40
               
               
               Alignm gaps (pig, cow):70, 90

               
               
               Conread position:594-860
               
               
               Cow position:chr8:4940622-4940358 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:272
               
               
               Alignm identity:196
               
               
               Alignm E-value:1e-38
               
               
               Alignm gaps (pig, cow):56, 18

               
               
               Conread position:594-861
               
               
               Cow position:chr8:8924657-8924397 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:272
               
               
               Alignm identity:195
               
               
               Alignm E-value:3e-34
               
               
               Alignm gaps (pig, cow):5, 36

               
               
               Conread position:595-800
               
               
               Cow position:chr8:36085479-36085682 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:208
               
               
               Alignm identity:146
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):67, 6

               
               
               Conread position:595-831
               
               
               Cow position:chr8:2822670-2822436 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:241
               
               
               Alignm identity:165
               
               
               Alignm E-value:9e-25
               
               
               Alignm gaps (pig, cow):67, 156

               
               
               Conread position:595-838
               
               
               Cow position:chr8:12697257-12697013 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:247
               
               
               Alignm identity:174
               
               
               Alignm E-value:8e-34
               
               
               Alignm gaps (pig, cow):67, 225

               
               
               Conread position:595-854
               
               
               Cow position:chr8:45981283-45981544 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:264
               
               
               Alignm identity:180
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):66, 97

               
               
               Conread position:595-861
               
               
               Cow position:chr8:54011714-54011983 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:273
               
               
               Alignm identity:187
               
               
               Alignm E-value:5e-30
               
               
               Alignm gaps (pig, cow):67, 97

               
               
               Conread position:596-746
               
               
               Cow position:chr8:20863504-20863354 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:152
               
               
               Alignm identity:112
               
               
               Alignm E-value:7e-23
               
               
               Alignm gaps (pig, cow):66, 47

               
               
               Conread position:596-821
               
               
               Cow position:chr8:36605980-36606207 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:229
               
               
               Alignm identity:163
               
               
               Alignm E-value:7e-33
               
               
               Alignm gaps (pig, cow):67, 191

               
               
               Conread position:596-860
               
               
               Cow position:chr8:22273549-22273814 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:270
               
               
               Alignm identity:186
               
               
               Alignm E-value:6e-32
               
               
               Alignm gaps (pig, cow):40, 95

               
               
               Conread position:597-861
               
               
               Cow position:chr8:2164216-2163950 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:193
               
               
               Alignm E-value:2.8026e-45
               
               
               Alignm gaps (pig, cow):65, 0

               
               
               Conread position:597-867
               
               
               Cow position:chr8:23382063-23381790 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:275
               
               
               Alignm identity:183
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):65, 235

               
               
               Conread position:598-835
               
               
               Cow position:chr8:39321020-39321242 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:240
               
               
               Alignm identity:172
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):63, 39

               
               
               Conread position:598-836
               
               
               Cow position:chr8:45276041-45276281 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:242
               
               
               Alignm identity:166
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):63, 93

               
               
               Conread position:599-871
               
               
               Cow position:chr8:46270145-46269870 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:276
               
               
               Alignm identity:180
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):62, 0

               
               
               Conread position:600-808
               
               
               Cow position:chr8:19204950-19204749 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:211
               
               
               Alignm identity:151
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):60, 143

               
               
               Conread position:600-852
               
               
               Cow position:chr8:24128817-24129067 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:256
               
               
               Alignm identity:177
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):62, 26

               
               
               Conread position:600-860
               
               
               Cow position:chr8:24364242-24363989 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:200
               
               
               Alignm E-value:1.99993e-41
               
               
               Alignm gaps (pig, cow):7, 84

               
               
               Conread position:601-831
               
               
               Cow position:chr8:18415446-18415220 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:234
               
               
               Alignm identity:163
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):61, 15

               
               
               Conread position:601-854
               
               
               Cow position:chr8:54588023-54588273 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:256
               
               
               Alignm identity:173
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):100, 55

               
               
               Conread position:601-867
               
               
               Cow position:chr8:39727305-39727574 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:270
               
               
               Alignm identity:181
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):61, 0

               
               
               Conread position:601-895
               
               
               Cow position:chr8:23588487-23588783 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:297
               
               
               Alignm identity:161
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):61, 0

               
               
               Conread position:604-802
               
               
               Cow position:chr8:1481443-1481642 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:200
               
               
               Alignm identity:139
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):58, 0

               
               
               Conread position:604-853
               
               
               Cow position:chr8:21941523-21941773 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:253
               
               
               Alignm identity:176
               
               
               Alignm E-value:7e-33
               
               
               Alignm gaps (pig, cow):57, 146

               
               
               Conread position:605-764
               
               
               Cow position:chr8:31704298-31704458 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:161
               
               
               Alignm identity:125
               
               
               Alignm E-value:6e-32
               
               
               Alignm gaps (pig, cow):57, 0

               
               
               Conread position:605-854
               
               
               Cow position:chr8:13266270-13266020 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:253
               
               
               Alignm identity:176
               
               
               Alignm E-value:7e-33
               
               
               Alignm gaps (pig, cow):96, 86

               
               
               Conread position:606-759
               
               
               Cow position:chr8:20343181-20343335 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:155
               
               
               Alignm identity:114
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):56, 0

               
               
               Conread position:606-860
               
               
               Cow position:chr8:24471347-24471601 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:187
               
               
               Alignm E-value:1e-38
               
               
               Alignm gaps (pig, cow):56, 172

               
               
               Conread position:607-836
               
               
               Cow position:chr8:20311622-20311853 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:234
               
               
               Alignm identity:169
               
               
               Alignm E-value:3e-34
               
               
               Alignm gaps (pig, cow):55, 85

               
               
               Conread position:607-869
               
               
               Cow position:chr8:45781966-45781702 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:186
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):54, 124

               
               
               Conread position:609-770
               
               
               Cow position:chr8:1946486-1946323 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:164
               
               
               Alignm identity:116
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):53, 0

               
               
               Conread position:609-836
               
               
               Cow position:chr8:25555620-25555391 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:230
               
               
               Alignm identity:156
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):53, 0

               
               
               Conread position:609-861
               
               
               Cow position:chr8:38357147-38356897 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:257
               
               
               Alignm identity:185
               
               
               Alignm E-value:1e-36
               
               
               Alignm gaps (pig, cow):53, 153

               
               
               Conread position:609-862
               
               
               Cow position:chr8:43794929-43795177 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:258
               
               
               Alignm identity:183
               
               
               Alignm E-value:6e-32
               
               
               Alignm gaps (pig, cow):51, 81

               
               
               Conread position:610-853
               
               
               Cow position:chr8:55925889-55926142 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:258
               
               
               Alignm identity:186
               
               
               Alignm E-value:8e-34
               
               
               Alignm gaps (pig, cow):34, 207

               
               
               Conread position:610-861
               
               
               Cow position:chr8:59642796-59642550 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:253
               
               
               Alignm identity:175
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):50, 71

               
               
               Conread position:611-836
               
               
               Cow position:chr8:11869269-11869043 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:229
               
               
               Alignm identity:153
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):51, 77

               
               
               Conread position:612-860
               
               
               Cow position:chr8:8721656-8721905 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:251
               
               
               Alignm identity:165
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):50, 11

               
               
               Conread position:612-860
               
               
               Cow position:chr8:35966326-35966078 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:250
               
               
               Alignm identity:184
               
               
               Alignm E-value:8.40779e-45
               
               
               Alignm gaps (pig, cow):203, 69

               
               
               Conread position:613-727
               
               
               Cow position:chr8:36299935-36300050 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:116
               
               
               Alignm identity:96
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):49, 0

               
               
               Conread position:613-859
               
               
               Cow position:chr8:19642177-19642421 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:249
               
               
               Alignm identity:181
               
               
               Alignm E-value:1e-39
               
               
               Alignm gaps (pig, cow):49, 149

               
               
               Conread position:614-849
               
               
               Cow position:chr8:60775020-60774787 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:238
               
               
               Alignm identity:172
               
               
               Alignm E-value:9e-36
               
               
               Alignm gaps (pig, cow):51, 68

               
               
               Conread position:615-810
               
               
               Cow position:chr8:52976082-52976279 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:198
               
               
               Alignm identity:137
               
               
               Alignm E-value:9e-25
               
               
               Alignm gaps (pig, cow):47, 0

               
               
               Conread position:615-861
               
               
               Cow position:chr8:26960828-26961076 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:258
               
               
               Alignm identity:181
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):47, 146

               
               
               Conread position:615-869
               
               
               Cow position:chr8:42146056-42145815 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:187
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):46, 62

               
               
               Conread position:616-759
               
               
               Cow position:chr8:37286783-37286927 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:145
               
               
               Alignm identity:109
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):46, 0

               
               
               Conread position:616-854
               
               
               Cow position:chr8:55360275-55360510 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:243
               
               
               Alignm identity:168
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):46, 139

               
               
               Conread position:616-862
               
               
               Cow position:chr8:37809917-37809672 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:248
               
               
               Alignm identity:170
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):46, 66

               
               
               Conread position:617-836
               
               
               Cow position:chr8:23218026-23218247 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:222
               
               
               Alignm identity:151
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):45, 0

               
               
               Conread position:617-861
               
               
               Cow position:chr8:22243978-22244219 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:248
               
               
               Alignm identity:170
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):45, 142

               
               
               Conread position:618-812
               
               
               Cow position:chr8:47169667-47169860 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:196
               
               
               Alignm identity:139
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):43, 63

               
               
               Conread position:620-745
               
               
               Cow position:chr8:36741341-36741467 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:127
               
               
               Alignm identity:103
               
               
               Alignm E-value:4e-27
               
               
               Alignm gaps (pig, cow):41, 0

               
               
               Conread position:620-821
               
               
               Cow position:chr8:24201617-24201818 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:205
               
               
               Alignm identity:149
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):42, 61

               
               
               Conread position:620-836
               
               
               Cow position:chr8:16280669-16280886 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:220
               
               
               Alignm identity:150
               
               
               Alignm E-value:8e-24
               
               
               Alignm gaps (pig, cow):42, 14

               
               
               Conread position:620-854
               
               
               Cow position:chr8:53573636-53573402 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:238
               
               
               Alignm identity:162
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):42, 72

               
               
               Conread position:621-847
               
               
               Cow position:chr8:39475155-39475380 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:231
               
               
               Alignm identity:173
               
               
               Alignm E-value:1e-37
               
               
               Alignm gaps (pig, cow):41, 6

               
               
               Conread position:622-837
               
               
               Cow position:chr8:42135635-42135424 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:219
               
               
               Alignm identity:152
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):40, 69

               
               
               Conread position:622-857
               
               
               Cow position:chr8:57985114-57984884 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:237
               
               
               Alignm identity:159
               
               
               Alignm E-value:7e-23
               
               
               Alignm gaps (pig, cow):40, 9

               
               
               Conread position:623-806
               
               
               Cow position:chr8:1833919-1833737 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:137
               
               
               Alignm E-value:5e-30
               
               
               Alignm gaps (pig, cow):39, 68

               
               
               Conread position:623-836
               
               
               Cow position:chr8:5195326-5195111 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:216
               
               
               Alignm identity:147
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):39, 0

               
               
               Conread position:623-837
               
               
               Cow position:chr8:38665244-38665454 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:216
               
               
               Alignm identity:152
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):39, 179

               
               
               Conread position:623-852
               
               
               Cow position:chr8:2814336-2814566 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:234
               
               
               Alignm identity:164
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):11, 75

               
               
               Conread position:623-852
               
               
               Cow position:chr8:2881778-2882007 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:233
               
               
               Alignm identity:157
               
               
               Alignm E-value:8e-24
               
               
               Alignm gaps (pig, cow):11, 132

               
               
               Conread position:623-854
               
               
               Cow position:chr8:42762708-42762486 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:233
               
               
               Alignm identity:164
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):192, 22

               
               
               Conread position:623-860
               
               
               Cow position:chr8:2774501-2774736 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:240
               
               
               Alignm identity:159
               
               
               Alignm E-value:7e-23
               
               
               Alignm gaps (pig, cow):11, 140

               
               
               Conread position:623-862
               
               
               Cow position:chr8:35971564-35971803 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:243
               
               
               Alignm identity:175
               
               
               Alignm E-value:9e-36
               
               
               Alignm gaps (pig, cow):118, 37

               
               
               Conread position:624-837
               
               
               Cow position:chr8:37298197-37298407 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:217
               
               
               Alignm identity:160
               
               
               Alignm E-value:6e-32
               
               
               Alignm gaps (pig, cow):38, 58

               
               
               Conread position:624-867
               
               
               Cow position:chr8:15407963-15407717 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:248
               
               
               Alignm identity:165
               
               
               Alignm E-value:9e-25
               
               
               Alignm gaps (pig, cow):38, 196

               
               
               Conread position:628-860
               
               
               Cow position:chr8:47461586-47461820 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:236
               
               
               Alignm identity:173
               
               
               Alignm E-value:1e-39
               
               
               Alignm gaps (pig, cow):22, 34

               
               
               Conread position:628-867
               
               
               Cow position:chr8:61036059-61035817 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:243
               
               
               Alignm identity:157
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):34, 0

               
               
               Conread position:629-860
               
               
               Cow position:chr8:53485433-53485649 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:232
               
               
               Alignm identity:163
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):11, 0

               
               
               Conread position:629-870
               
               
               Cow position:chr8:53383129-53383363 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:245
               
               
               Alignm identity:171
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):223, 58

               
               
               Conread position:630-869
               
               
               Cow position:chr8:60746372-60746606 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:241
               
               
               Alignm identity:172
               
               
               Alignm E-value:7e-33
               
               
               Alignm gaps (pig, cow):185, 15

               
               
               Conread position:631-759
               
               
               Cow position:chr8:49277441-49277312 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:130
               
               
               Alignm identity:98
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):31, 0

               
               
               Conread position:631-862
               
               
               Cow position:chr8:47665182-47664953 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:235
               
               
               Alignm identity:168
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):30, 146

               
               
               Conread position:631-868
               
               
               Cow position:chr8:19574112-19574352 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:241
               
               
               Alignm identity:158
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):31, 0

               
               
               Conread position:631-869
               
               
               Cow position:chr8:38681609-38681841 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:240
               
               
               Alignm identity:163
               
               
               Alignm E-value:9e-25
               
               
               Alignm gaps (pig, cow):184, 18

               
               
               Conread position:634-852
               
               
               Cow position:chr8:38806726-38806506 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:223
               
               
               Alignm identity:154
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):28, 48

               
               
               Conread position:635-851
               
               
               Cow position:chr8:34799404-34799617 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:220
               
               
               Alignm identity:152
               
               
               Alignm E-value:7e-23
               
               
               Alignm gaps (pig, cow):172, 22

               
               
               Conread position:636-823
               
               
               Cow position:chr8:50451583-50451394 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:190
               
               
               Alignm identity:129
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):26, 0

               
               
               Conread position:637-787
               
               
               Cow position:chr8:49691346-49691195 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:152
               
               
               Alignm identity:109
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):25, 0

               
               
               Conread position:637-810
               
               
               Cow position:chr8:53839983-53840158 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:176
               
               
               Alignm identity:123
               
               
               Alignm E-value:6e-22
               
               
               Alignm gaps (pig, cow):25, 0

               
               
               Conread position:637-811
               
               
               Cow position:chr8:48437670-48437497 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:178
               
               
               Alignm identity:133
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):25, 126

               
               
               Conread position:637-860
               
               
               Cow position:chr8:38780441-38780660 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:229
               
               
               Alignm identity:164
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):25, 89

               
               
               Conread position:638-854
               
               
               Cow position:chr8:39721397-39721610 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:221
               
               
               Alignm identity:156
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):24, 121

               
               
               Conread position:640-811
               
               
               Cow position:chr8:52198229-52198398 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:173
               
               
               Alignm identity:127
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):22, 138

               
               
               Conread position:640-836
               
               
               Cow position:chr8:3848354-3848156 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:137
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):22, 0

               
               
               Conread position:640-854
               
               
               Cow position:chr8:26837446-26837231 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:217
               
               
               Alignm identity:146
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):22, 81

               
               
               Conread position:640-860
               
               
               Cow position:chr8:27648377-27648595 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:222
               
               
               Alignm identity:150
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):22, 173

               
               
               Conread position:642-850
               
               
               Cow position:chr8:45664513-45664715 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:211
               
               
               Alignm identity:150
               
               
               Alignm E-value:9e-25
               
               
               Alignm gaps (pig, cow):161, 8

               
               
               Conread position:643-861
               
               
               Cow position:chr8:31775920-31776141 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:223
               
               
               Alignm identity:154
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):19, 215

               
               
               Conread position:643-862
               
               
               Cow position:chr8:36059577-36059797 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:224
               
               
               Alignm identity:156
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):19, 134

               
               
               Conread position:643-864
               
               
               Cow position:chr8:20339022-20339242 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:226
               
               
               Alignm identity:162
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):19, 114

               
               
               Conread position:644-858
               
               
               Cow position:chr8:844198-843988 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:218
               
               
               Alignm identity:150
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):18, 29

               
               
               Conread position:644-860
               
               
               Cow position:chr8:18207410-18207183 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:230
               
               
               Alignm identity:161
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):5, 152

               
               
               Conread position:644-867
               
               
               Cow position:chr8:16738972-16739197 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:227
               
               
               Alignm identity:150
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):18, 96

               
               
               Conread position:646-854
               
               
               Cow position:chr8:39630512-39630719 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:210
               
               
               Alignm identity:147
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):169, 14

               
               
               Conread position:649-851
               
               
               Cow position:chr8:20564018-20563820 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:206
               
               
               Alignm identity:145
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):154, 11

               
               
               Conread position:649-853
               
               
               Cow position:chr8:10434551-10434752 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:207
               
               
               Alignm identity:145
               
               
               Alignm E-value:9e-25
               
               
               Alignm gaps (pig, cow):12, 79

               
               
               Conread position:649-860
               
               
               Cow position:chr8:225622-225415 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:215
               
               
               Alignm identity:156
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):15, 113

               
               
               Conread position:649-860
               
               
               Cow position:chr8:10263418-10263215 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:213
               
               
               Alignm identity:156
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):38, 11

               
               
               Conread position:649-860
               
               
               Cow position:chr8:37571963-37571752 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:215
               
               
               Alignm identity:154
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):161, 54

               
               
               Conread position:649-860
               
               
               Cow position:chr8:44437510-44437717 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:215
               
               
               Alignm identity:157
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):12, 114

               
               
               Conread position:650-765
               
               
               Cow position:chr8:13634107-13634223 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:117
               
               
               Alignm identity:93
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):12, 0

               
               
               Conread position:650-852
               
               
               Cow position:chr8:25249524-25249728 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:206
               
               
               Alignm identity:144
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):12, 170

               
               
               Conread position:650-861
               
               
               Cow position:chr8:47136267-47136059 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:213
               
               
               Alignm identity:157
               
               
               Alignm E-value:3e-34
               
               
               Alignm gaps (pig, cow):12, 50

               
               
               Conread position:650-861
               
               
               Cow position:chr8:58346553-58346755 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:214
               
               
               Alignm identity:151
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):153, 108

               
               
               Conread position:650-862
               
               
               Cow position:chr8:39039775-39039982 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:214
               
               
               Alignm identity:154
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):165, 10

               
               
               Conread position:650-862
               
               
               Cow position:chr8:48775559-48775771 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:218
               
               
               Alignm identity:151
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):12, 118

               
               
               Conread position:651-838
               
               
               Cow position:chr8:24868001-24867813 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:189
               
               
               Alignm identity:132
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):11, 0

               
               
               Conread position:651-864
               
               
               Cow position:chr8:1393975-1394186 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:219
               
               
               Alignm identity:159
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):11, 41

               
               
               Conread position:652-808
               
               
               Cow position:chr8:32984360-32984207 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:158
               
               
               Alignm identity:116
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):132, 8

               
               
               Conread position:652-859
               
               
               Cow position:chr8:20212759-20212557 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:211
               
               
               Alignm identity:153
               
               
               Alignm E-value:4e-27
               
               
               Alignm gaps (pig, cow):155, 8

               
               
               Conread position:652-867
               
               
               Cow position:chr8:36858354-36858148 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:220
               
               
               Alignm identity:163
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):10, 49

               
               
               Conread position:655-851
               
               
               Cow position:chr8:11612298-11612490 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:140
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):157, 5

               
               
               Conread position:655-851
               
               
               Cow position:chr8:34477865-34478061 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:138
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):31, 5

               
               
               Conread position:660-853
               
               
               Cow position:chr8:57045744-57045551 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:195
               
               
               Alignm identity:142
               
               
               Alignm E-value:5e-31
               
               
               Alignm gaps (pig, cow):152, 158

               
               
               Conread position:660-857
               
               
               Cow position:chr8:2953389-2953580 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:138
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):155, 90

               
               
               Conread position:660-859
               
               
               Cow position:chr8:1023715-1023915 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:203
               
               
               Alignm identity:146
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):50, 20

               
               
               Conread position:660-860
               
               
               Cow position:chr8:17180271-17180080 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:203
               
               
               Alignm identity:144
               
               
               Alignm E-value:6e-22
               
               
               Alignm gaps (pig, cow):31, 102

               
               
               Conread position:660-862
               
               
               Cow position:chr8:43687295-43687497 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:208
               
               
               Alignm identity:152
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):100, 123

               
               
               Conread position:660-868
               
               
               Cow position:chr8:28185902-28185697 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:210
               
               
               Alignm identity:148
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):155, 96

               
               
               Conread position:661-851
               
               
               Cow position:chr8:25349464-25349654 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:192
               
               
               Alignm identity:142
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):150, 155

               
               
               Conread position:661-853
               
               
               Cow position:chr8:32988501-32988687 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:194
               
               
               Alignm identity:138
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):154, 95

               
               
               Conread position:661-854
               
               
               Cow position:chr8:17669985-17669794 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:195
               
               
               Alignm identity:138
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):151, 20

               
               
               Conread position:661-860
               
               
               Cow position:chr8:41627365-41627166 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:203
               
               
               Alignm identity:144
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):146, 99

               
               
               Conread position:667-854
               
               
               Cow position:chr8:20683734-20683915 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:189
               
               
               Alignm identity:134
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):144, 62

               
               
               Conread position:668-870
               
               
               Cow position:chr8:32295976-32295766 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:211
               
               
               Alignm identity:153
               
               
               Alignm E-value:5e-30
               
               
               Alignm gaps (pig, cow):70, 0

               
               
               Conread position:669-860
               
               
               Cow position:chr8:28509728-28509534 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:196
               
               
               Alignm identity:136
               
               
               Alignm E-value:7e-23
               
               
               Alignm gaps (pig, cow):147, 157

               
               
               Conread position:677-854
               
               
               Cow position:chr8:35990818-35990994 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:179
               
               
               Alignm identity:125
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):139, 126

               
               
               Conread position:681-869
               
               
               Cow position:chr8:35504460-35504275 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:191
               
               
               Alignm identity:134
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):134, 80
Show alignments to all cow chromosomes.
Conread position:	317-813
Cow position:	chr8:44703506-44703995 (view UCSC Genome Browser custom track)
Alignm length:	499
Alignm identity:	175
Alignm E-value:	2e-31
Alignm gaps (pig, cow):	278, 335
Conread position:	377-695
Cow position:	chr8:4079945-4079623 (view UCSC Genome Browser custom track)
Alignm length:	328
Alignm identity:	214
Alignm E-value:	3e-25
Alignm gaps (pig, cow):	9, 18
Conread position:	380-861
Cow position:	chr8:1252435-1252905 (view UCSC Genome Browser custom track)
Alignm length:	486
Alignm identity:	341
Alignm E-value:	0
Alignm gaps (pig, cow):	36, 24
Conread position:	385-867
Cow position:	chr8:58229678-58230163 (view UCSC Genome Browser custom track)
Alignm length:	489
Alignm identity:	345
Alignm E-value:	0
Alignm gaps (pig, cow):	10, 28
Conread position:	395-806
Cow position:	chr8:8902483-8902067 (view UCSC Genome Browser custom track)
Alignm length:	422
Alignm identity:	291
Alignm E-value:	0
Alignm gaps (pig, cow):	18, 50
Conread position:	395-836
Cow position:	chr8:12247279-12246834 (view UCSC Genome Browser custom track)
Alignm length:	447
Alignm identity:	311
Alignm E-value:	0
Alignm gaps (pig, cow):	18, 144
Conread position:	396-662
Cow position:	chr8:26922091-26922376 (view UCSC Genome Browser custom track)
Alignm length:	286
Alignm identity:	197
Alignm E-value:	5e-30
Alignm gaps (pig, cow):	58, 0
Conread position:	400-661
Cow position:	chr8:13315116-13314844 (view UCSC Genome Browser custom track)
Alignm length:	279
Alignm identity:	191
Alignm E-value:	3e-24
Alignm gaps (pig, cow):	95, 23
Conread position:	404-649
Cow position:	chr8:42794852-42794607 (view UCSC Genome Browser custom track)
Alignm length:	247
Alignm identity:	191
Alignm E-value:	0
Alignm gaps (pig, cow):	67, 137
Conread position:	405-744
Cow position:	chr8:25387459-25387802 (view UCSC Genome Browser custom track)
Alignm length:	347
Alignm identity:	259
Alignm E-value:	0
Alignm gaps (pig, cow):	33, 57
Conread position:	410-830
Cow position:	chr8:33584642-33585083 (view UCSC Genome Browser custom track)
Alignm length:	448
Alignm identity:	308
Alignm E-value:	0
Alignm gaps (pig, cow):	6, 50
Conread position:	413-754
Cow position:	chr8:11740230-11739900 (view UCSC Genome Browser custom track)
Alignm length:	347
Alignm identity:	233
Alignm E-value:	5e-31
Alignm gaps (pig, cow):	113, 9
Conread position:	413-804
Cow position:	chr8:29262277-29262682 (view UCSC Genome Browser custom track)
Alignm length:	407
Alignm identity:	283
Alignm E-value:	0
Alignm gaps (pig, cow):	105, 59
Conread position:	414-867
Cow position:	chr8:24724755-24725211 (view UCSC Genome Browser custom track)
Alignm length:	457
Alignm identity:	327
Alignm E-value:	0
Alignm gaps (pig, cow):	247, 0
Conread position:	415-554
Cow position:	chr8:46615284-46615423 (view UCSC Genome Browser custom track)
Alignm length:	140
Alignm identity:	109
Alignm E-value:	1e-27
Alignm gaps (pig, cow):	0, 0
Conread position:	415-595
Cow position:	chr8:5243194-5243008 (view UCSC Genome Browser custom track)
Alignm length:	188
Alignm identity:	138
Alignm E-value:	3e-26
Alignm gaps (pig, cow):	110, 34
Conread position:	415-616
Cow position:	chr8:1146657-1146457 (view UCSC Genome Browser custom track)
Alignm length:	202
Alignm identity:	153
Alignm E-value:	4e-39
Alignm gaps (pig, cow):	92, 0
Conread position:	415-619
Cow position:	chr8:11782036-11782245 (view UCSC Genome Browser custom track)
Alignm length:	213
Alignm identity:	147
Alignm E-value:	6e-21
Alignm gaps (pig, cow):	114, 156
Conread position:	415-635
Cow position:	chr8:19616077-19616302 (view UCSC Genome Browser custom track)
Alignm length:	226
Alignm identity:	156
Alignm E-value:	4e-28
Alignm gaps (pig, cow):	114, 0
Conread position:	415-640
Cow position:	chr8:4274173-4274379 (view UCSC Genome Browser custom track)
Alignm length:	226
Alignm identity:	163
Alignm E-value:	3e-24
Alignm gaps (pig, cow):	53, 0