Cow genome map

Conread name: Ss1.1-ruio09_c16.5

Conread position: 392-754
Cow position: chrX:47379975-47379603 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 364

Conread position: 395-806
Cow position: chrX:20652905-20653312 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 279
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 162, 19

Conread position: 395-807
Cow position: chrX:19228572-19228149 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 302
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 87, 16

Conread position: 396-758
Cow position: chrX:508654-508286 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 249
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 130, 115

Conread position: 405-758
Cow position: chrX:5246765-5247132 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 255
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 132, 18

Conread position: 412-658
Cow position: chrX:8541989-8542237 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 178
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 33, 19

Conread position: 412-660
Cow position: chrX:1499110-1499364 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 183
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 132, 0

Conread position: 412-860
Cow position: chrX:18118948-18118500 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 5

Conread position: 414-575
Cow position: chrX:23908650-23908486 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 128, 17

Conread position: 414-662
Cow position: chrX:37066794-37067046 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 175
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 112, 203

Conread position: 414-745
Cow position: chrX:12437711-12437384 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 164

Conread position: 414-754
Cow position: chrX:1518924-1518574 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 241
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 12, 0

Conread position: 414-806
Cow position: chrX:34009268-34009663 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 267
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 123, 290

Conread position: 414-828
Cow position: chrX:16706323-16706742 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 409

Conread position: 414-851
Cow position: chrX:24482846-24482410 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 126

Conread position: 414-851
Cow position: chrX:45373759-45373329 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 154

Conread position: 414-860
Cow position: chrX:31261112-31260660 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 54

Conread position: 414-867
Cow position: chrX:24413554-24414010 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 126

Conread position: 415-602
Cow position: chrX:21596062-21596249 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 52, 18

Conread position: 415-634
Cow position: chrX:33707923-33708139 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 122, 58

Conread position: 415-641
Cow position: chrX:5277393-5277165 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 160
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 119, 58

Conread position: 415-648
Cow position: chrX:6043964-6043727 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 164
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 117, 90

Conread position: 415-648
Cow position: chrX:25425658-25425896 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 173
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 111, 211

Conread position: 415-650
Cow position: chrX:40788672-40788917 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 175
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 66, 115

Conread position: 415-669
Cow position: chrX:37572689-37572944 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 0

Conread position: 415-672
Cow position: chrX:8869860-8869601 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 122

Conread position: 415-675
Cow position: chrX:37955423-37955688 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 189
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 120, 38

Conread position: 415-688
Cow position: chrX:9235183-9235456 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 189
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 109, 7

Conread position: 415-688
Cow position: chrX:16040155-16039881 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 122

Conread position: 415-694
Cow position: chrX:3405831-3405552 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 268

Conread position: 415-694
Cow position: chrX:20654095-20654384 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 195
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 59, 25

Conread position: 415-746
Cow position: chrX:1655013-1655334 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 212
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 246, 38

Conread position: 415-746
Cow position: chrX:19636437-19636766 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 238
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 114, 70

Conread position: 415-746
Cow position: chrX:31777910-31777577 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 222
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 95, 47

Conread position: 415-754
Cow position: chrX:4665096-4664752 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 234
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 43, 48

Conread position: 415-754
Cow position: chrX:20504287-20504627 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 251
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 120, 49

Conread position: 415-758
Cow position: chrX:18896902-18896551 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 238
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 64, 133

Conread position: 415-799
Cow position: chrX:30836898-30837286 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 122

Conread position: 415-805
Cow position: chrX:25281965-25281552 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 281
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 110, 135

Conread position: 415-807
Cow position: chrX:5127454-5127831 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 265
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 118, 58

Conread position: 415-810
Cow position: chrX:30940706-30941103 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 122

Conread position: 415-823
Cow position: chrX:29864906-29864494 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 266

Conread position: 415-830
Cow position: chrX:8782269-8782686 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 122

Conread position: 415-830
Cow position: chrX:27105784-27106200 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 16

Conread position: 415-836
Cow position: chrX:1550472-1550898 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 408

Conread position: 415-836
Cow position: chrX:2479102-2478680 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 276

Conread position: 415-836
Cow position: chrX:27498292-27498716 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 406

Conread position: 415-837
Cow position: chrX:17794518-17794927 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 224

Conread position: 415-853
Cow position: chrX:40269001-40269448 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 413

Conread position: 415-854
Cow position: chrX:32094926-32094484 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 278

Conread position: 415-858
Cow position: chrX:878845-878412 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 228

Conread position: 415-860
Cow position: chrX:160953-161380 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 283

Conread position: 415-860
Cow position: chrX:22077852-22078299 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 122

Conread position: 415-860
Cow position: chrX:36250339-36249894 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 125

Conread position: 415-860
Cow position: chrX:39714076-39714521 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 91

Conread position: 415-860
Cow position: chrX:41879405-41878965 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 195

Conread position: 415-864
Cow position: chrX:39546455-39546003 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 289

Conread position: 415-867
Cow position: chrX:10351386-10351841 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 122

Conread position: 415-872
Cow position: chrX:25575484-25575946 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 268

Conread position: 416-649
Cow position: chrX:41754242-41754479 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 171
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 110, 7

Conread position: 416-660
Cow position: chrX:9854800-9855050 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 185
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 107, 15

Conread position: 416-660
Cow position: chrX:9953642-9953891 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 188
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 113, 15

Conread position: 416-767
Cow position: chrX:9898813-9898463 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 15

Conread position: 417-585
Cow position: chrX:21794461-21794624 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 51, 0

Conread position: 417-722
Cow position: chrX:47965472-47965152 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 92

Conread position: 417-737
Cow position: chrX:13460382-13460057 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 216
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 109, 47

Conread position: 417-746
Cow position: chrX:16530449-16530783 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 226
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 38, 10

Conread position: 417-838
Cow position: chrX:11083083-11082669 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 45

Conread position: 418-646
Cow position: chrX:19127721-19127471 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 178
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 83, 222

Conread position: 418-648
Cow position: chrX:24174426-24174191 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 160
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 49, 112

Conread position: 418-649
Cow position: chrX:28214862-28215098 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 164
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 112, 75

Conread position: 418-654
Cow position: chrX:6695822-6695581 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 190

Conread position: 418-660
Cow position: chrX:22623980-22624225 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 173
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 124, 231

Conread position: 418-687
Cow position: chrX:19622836-19623112 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 187
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 109, 266

Conread position: 418-696
Cow position: chrX:44367304-44367584 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 198
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 108, 9

Conread position: 418-738
Cow position: chrX:33172440-33172109 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 226
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 109, 9

Conread position: 418-746
Cow position: chrX:23514947-23514614 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 219
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 114, 46

Conread position: 418-746
Cow position: chrX:28666447-28666113 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 213
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 110, 63

Conread position: 418-754
Cow position: chrX:37105697-37106038 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 214
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 106, 0

Conread position: 418-766
Cow position: chrX:41701447-41701795 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 238
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 48, 197

Conread position: 418-770
Cow position: chrX:3121339-3120981 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 246
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 112, 34

Conread position: 418-806
Cow position: chrX:18293467-18293843 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 264
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 118, 33

Conread position: 418-869
Cow position: chrX:13648256-13647807 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 328

Conread position: 418-869
Cow position: chrX:20698071-20697628 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 44

Conread position: 419-564
Cow position: chrX:35272896-35273042 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 123, 0

Conread position: 419-596
Cow position: chrX:35260505-35260683 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 141
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 161, 0

Conread position: 419-615
Cow position: chrX:38642549-38642750 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 122, 0

Conread position: 419-641
Cow position: chrX:21191402-21191629 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 154
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 104, 45

Conread position: 419-644
Cow position: chrX:5069960-5069735 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 152
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 125, 66

Conread position: 419-644
Cow position: chrX:37781550-37781331 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 419-647
Cow position: chrX:38940905-38941134 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 34, 0

Conread position: 419-653
Cow position: chrX:22590769-22591007 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 159
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 48, 39

Conread position: 419-653
Cow position: chrX:44901673-44901911 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 174
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 106, 221

Conread position: 419-660
Cow position: chrX:38934783-38935027 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 177
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 34, 0

Conread position: 419-660
Cow position: chrX:48310856-48310610 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 183
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 122, 178

Conread position: 419-661
Cow position: chrX:33538455-33538699 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 419-669
Cow position: chrX:31385246-31385495 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 228

Conread position: 419-691
Cow position: chrX:39383553-39383277 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 181
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 104, 65

Conread position: 419-695
Cow position: chrX:38852688-38852962 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 218

Conread position: 419-696
Cow position: chrX:42540128-42540410 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 190
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 118, 0

Conread position: 419-699
Cow position: chrX:2463171-2462894 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 190
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 104, 126

Conread position: 419-704
Cow position: chrX:20538805-20539085 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 201
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 46, 109

Conread position: 419-741
Cow position: chrX:525205-525528 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 63

Conread position: 419-751
Cow position: chrX:27240261-27240600 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 229
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 107, 61

Conread position: 419-754
Cow position: chrX:10409558-10409217 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 224
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 39, 48

Conread position: 419-754
Cow position: chrX:16229448-16229110 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 219
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 121, 81

Conread position: 419-754
Cow position: chrX:41106488-41106144 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 224
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 103, 0

Conread position: 419-758
Cow position: chrX:37949314-37949645 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 237
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 39, 44

Conread position: 419-759
Cow position: chrX:13138686-13138341 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 229
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 37, 26

Conread position: 419-766
Cow position: chrX:26845034-26845396 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 243
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 85, 0

Conread position: 419-767
Cow position: chrX:41304214-41303868 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 241
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 116, 72

Conread position: 419-772
Cow position: chrX:4325962-4325614 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 249
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 110, 49

Conread position: 419-772
Cow position: chrX:20383008-20382663 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 253
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 106, 126

Conread position: 419-775
Cow position: chrX:32182507-32182141 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 251
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 35, 61

Conread position: 419-792
Cow position: chrX:23932702-23932336 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 236
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 39, 50

Conread position: 419-793
Cow position: chrX:36294663-36295033 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 240
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 32, 189

Conread position: 419-797
Cow position: chrX:7677498-7677877 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 53

Conread position: 419-805
Cow position: chrX:529327-529713 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 266

Conread position: 419-805
Cow position: chrX:33803492-33803097 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 189

Conread position: 419-805
Cow position: chrX:41192218-41192598 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 244

Conread position: 419-806
Cow position: chrX:38140511-38140119 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 264
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 49, 194

Conread position: 419-808
Cow position: chrX:42086392-42086780 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 70

Conread position: 419-810
Cow position: chrX:7755430-7755823 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 118

Conread position: 419-810
Cow position: chrX:29760228-29760621 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 118

Conread position: 419-815
Cow position: chrX:9252642-9252255 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 0

Conread position: 419-821
Cow position: chrX:45430494-45430088 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 283

Conread position: 419-828
Cow position: chrX:16713726-16714136 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 0

Conread position: 419-829
Cow position: chrX:16046676-16047090 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 119

Conread position: 419-836
Cow position: chrX:13177931-13177522 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 85

Conread position: 419-836
Cow position: chrX:14819242-14819662 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 14

Conread position: 419-838
Cow position: chrX:13912622-13913020 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 284
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 59, 71

Conread position: 419-847
Cow position: chrX:34990589-34990989 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 297
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 237, 100

Conread position: 419-851
Cow position: chrX:20582560-20582986 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 26

Conread position: 419-854
Cow position: chrX:31949400-31948976 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 32

Conread position: 419-854
Cow position: chrX:35388378-35387941 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 386

Conread position: 419-860
Cow position: chrX:18244511-18244957 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 128

Conread position: 419-860
Cow position: chrX:31489040-31489487 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 283

Conread position: 419-863
Cow position: chrX:7571432-7571872 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 338

Conread position: 419-864
Cow position: chrX:1810631-1810189 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 118

Conread position: 419-864
Cow position: chrX:41526982-41526549 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 288
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 436, 47

Conread position: 419-867
Cow position: chrX:5280324-5279874 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 118

Conread position: 419-867
Cow position: chrX:5423537-5423086 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 118

Conread position: 419-867
Cow position: chrX:27422752-27422302 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 118

Conread position: 419-868
Cow position: chrX:18222942-18223391 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 118

Conread position: 419-871
Cow position: chrX:9085804-9085347 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 118

Conread position: 420-727
Cow position: chrX:27019735-27020040 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 162

Conread position: 420-762
Cow position: chrX:26787854-26788197 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 226
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 100, 34

Conread position: 421-867
Cow position: chrX:7742925-7742477 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 25

Conread position: 423-641
Cow position: chrX:33493265-33493483 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 423-647
Cow position: chrX:11846321-11846547 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 156
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 103, 84

Conread position: 423-661
Cow position: chrX:38548943-38549184 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 184
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 127, 56

Conread position: 424-614
Cow position: chrX:10960192-10960389 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 150
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 101, 0

Conread position: 424-646
Cow position: chrX:20131356-20131124 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 162
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 62, 0

Conread position: 424-654
Cow position: chrX:9635719-9635481 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 171
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 124, 0

Conread position: 424-669
Cow position: chrX:13404817-13404565 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 28

Conread position: 424-695
Cow position: chrX:10256608-10256338 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 184

Conread position: 424-695
Cow position: chrX:23819690-23819419 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 186
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 102, 38

Conread position: 424-727
Cow position: chrX:48243917-48243614 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 48

Conread position: 424-746
Cow position: chrX:20970453-20970780 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 218
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 108, 272

Conread position: 424-754
Cow position: chrX:41306100-41305768 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 228
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 102, 255

Conread position: 424-759
Cow position: chrX:165422-165761 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 212
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 105, 30

Conread position: 424-766
Cow position: chrX:18459928-18459580 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 230
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 37, 45

Conread position: 424-773
Cow position: chrX:12111124-12110771 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 226
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 92, 135

Conread position: 424-860
Cow position: chrX:11655611-11656059 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 389

Conread position: 426-754
Cow position: chrX:40322449-40322781 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 220
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 101, 74

Conread position: 426-773
Cow position: chrX:5676164-5675818 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 241
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 114, 52

Conread position: 428-808
Cow position: chrX:23696884-23696494 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 261
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 108, 179

Conread position: 429-523
Cow position: chrX:11632186-11632280 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 81
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 429-532
Cow position: chrX:1958450-1958346 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 429-532
Cow position: chrX:16514708-16514606 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 97, 0

Conread position: 429-536
Cow position: chrX:40559724-40559617 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 429-541
Cow position: chrX:40187517-40187629 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 429-555
Cow position: chrX:31435866-31435991 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 105, 0

Conread position: 429-567
Cow position: chrX:6235118-6234980 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 429-574
Cow position: chrX:18215470-18215616 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 123
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 63, 128

Conread position: 429-585
Cow position: chrX:31251804-31251960 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 429-597
Cow position: chrX:42281936-42282111 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 45, 0

Conread position: 429-607
Cow position: chrX:17231039-17231217 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 429-608
Cow position: chrX:37118441-37118623 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 108, 22

Conread position: 429-614
Cow position: chrX:8518611-8518799 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 29, 40

Conread position: 429-618
Cow position: chrX:37831934-37831739 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 151
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 95, 39

Conread position: 429-619
Cow position: chrX:729333-729135 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 105, 39

Conread position: 429-629
Cow position: chrX:18989000-18989205 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 103, 39

Conread position: 429-638
Cow position: chrX:21662634-21662843 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 107

Conread position: 429-640
Cow position: chrX:13429923-13429720 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 149
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 59, 39

Conread position: 429-646
Cow position: chrX:3471261-3471483 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 50, 0

Conread position: 429-647
Cow position: chrX:5648859-5648638 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 166
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 23, 90

Conread position: 429-647
Cow position: chrX:6766206-6765981 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 157
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 429-647
Cow position: chrX:19878572-19878794 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 159
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 96, 126

Conread position: 429-647
Cow position: chrX:46701547-46701336 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 147
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 429-648
Cow position: chrX:3145542-3145762 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 112, 13

Conread position: 429-648
Cow position: chrX:16324714-16324489 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 174
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 97, 0

Conread position: 429-648
Cow position: chrX:24366413-24366193 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 210

Conread position: 429-649
Cow position: chrX:8517143-8517367 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 171
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 112, 39

Conread position: 429-649
Cow position: chrX:42381890-42381669 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 81

Conread position: 429-650
Cow position: chrX:3582731-3582957 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 169
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 111, 39

Conread position: 429-650
Cow position: chrX:28993609-28993385 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 154
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 98, 45

Conread position: 429-650
Cow position: chrX:40496062-40495838 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 149
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 115, 0

Conread position: 429-652
Cow position: chrX:25816716-25816496 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 0

Conread position: 429-653
Cow position: chrX:11855708-11855929 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 172
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 208, 0

Conread position: 429-653
Cow position: chrX:17265512-17265283 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 177
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 104, 16

Conread position: 429-653
Cow position: chrX:23969896-23970121 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 429-653
Cow position: chrX:25404818-25404592 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 145, 39

Conread position: 429-653
Cow position: chrX:38840388-38840620 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 173
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 96, 215

Conread position: 429-654
Cow position: chrX:7424966-7425194 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 167
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 88, 21

Conread position: 429-654
Cow position: chrX:29602501-29602285 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 39, 0

Conread position: 429-654
Cow position: chrX:29875467-29875231 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 168
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 97, 219

Conread position: 429-656
Cow position: chrX:27679890-27680127 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 183
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 90, 138

Conread position: 429-658
Cow position: chrX:6279071-6278848 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 172
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 88, 0

Conread position: 429-658
Cow position: chrX:19929968-19930198 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 174
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 112, 16

Conread position: 429-659
Cow position: chrX:31745958-31745726 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 0

Conread position: 429-660
Cow position: chrX:2701298-2701064 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 166
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 101, 146

Conread position: 429-660
Cow position: chrX:6835723-6835488 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 159
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 100, 202

Conread position: 429-660
Cow position: chrX:34543303-34543533 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 429-660
Cow position: chrX:41067372-41067609 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 429-660
Cow position: chrX:42530956-42530715 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 175
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 36, 219

Conread position: 429-660
Cow position: chrX:44961252-44961485 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 172
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 219, 0

Conread position: 429-660
Cow position: chrX:47243766-47243533 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 176

Conread position: 429-661
Cow position: chrX:25163332-25163564 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 178
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 104, 165

Conread position: 429-661
Cow position: chrX:25436393-25436157 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 173
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 104, 14

Conread position: 429-665
Cow position: chrX:39757572-39757809 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 108

Conread position: 429-667
Cow position: chrX:4750833-4750601 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 45

Conread position: 429-667
Cow position: chrX:17200326-17200581 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 183
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 56, 0

Conread position: 429-668
Cow position: chrX:24260074-24259833 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 173
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 117, 212

Conread position: 429-669
Cow position: chrX:13266291-13266044 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 51

Conread position: 429-669
Cow position: chrX:24309580-24309343 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 166
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 237, 95

Conread position: 429-675
Cow position: chrX:158295-158048 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 184
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 108, 146

Conread position: 429-688
Cow position: chrX:6406885-6407142 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 28

Conread position: 429-688
Cow position: chrX:16222165-16222424 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 108

Conread position: 429-689
Cow position: chrX:39292204-39291944 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 252

Conread position: 429-691
Cow position: chrX:10920431-10920167 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 185
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 43, 65

Conread position: 429-691
Cow position: chrX:17892082-17892345 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 111

Conread position: 429-699
Cow position: chrX:35025346-35025613 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 39

Conread position: 429-719
Cow position: chrX:41594743-41594443 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 213
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 106, 265

Conread position: 429-721
Cow position: chrX:47654843-47655132 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 40

Conread position: 429-742
Cow position: chrX:31728997-31729309 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 272

Conread position: 429-743
Cow position: chrX:34564839-34565146 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 206

Conread position: 429-746
Cow position: chrX:389045-389362 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 213
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 102, 55

Conread position: 429-746
Cow position: chrX:18684318-18684632 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 219
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 98, 146

Conread position: 429-751
Cow position: chrX:29049516-29049830 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 14

Conread position: 429-751
Cow position: chrX:44873995-44873688 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 228
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 267, 129

Conread position: 429-754
Cow position: chrX:3807932-3808273 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 283

Conread position: 429-756
Cow position: chrX:2351601-2351929 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 0

Conread position: 429-758
Cow position: chrX:14974199-14973865 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 244
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 68, 196

Conread position: 429-758
Cow position: chrX:33003790-33004125 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 213
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 98, 67

Conread position: 429-758
Cow position: chrX:33614936-33615274 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 230
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 40, 0

Conread position: 429-759
Cow position: chrX:28588510-28588840 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 50

Conread position: 429-762
Cow position: chrX:19595804-19596146 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 234
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 94, 114

Conread position: 429-762
Cow position: chrX:40279341-40279696 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 243
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 102, 136

Conread position: 429-764
Cow position: chrX:21862131-21861795 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 154

Conread position: 429-770
Cow position: chrX:28513612-28513952 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 50

Conread position: 429-775
Cow position: chrX:9651507-9651160 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 0

Conread position: 429-775
Cow position: chrX:12290276-12290622 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 324, 179

Conread position: 429-775
Cow position: chrX:44192904-44192567 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 112

Conread position: 429-787
Cow position: chrX:19437548-19437182 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 246
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 103, 37

Conread position: 429-799
Cow position: chrX:24173626-24173258 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 97

Conread position: 429-800
Cow position: chrX:32871247-32870876 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 233

Conread position: 429-801
Cow position: chrX:10415986-10415619 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 149

Conread position: 429-801
Cow position: chrX:30823055-30823428 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 215

Conread position: 429-801
Cow position: chrX:33822637-33823011 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 261
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 101, 51

Conread position: 429-806
Cow position: chrX:42841519-42841134 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 258
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 105, 16

Conread position: 429-807
Cow position: chrX:27485942-27486324 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 223

Conread position: 429-808
Cow position: chrX:2465744-2465361 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 264
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 100, 11

Conread position: 429-808
Cow position: chrX:3161474-3161099 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 57

Conread position: 429-808
Cow position: chrX:4630161-4629770 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 139

Conread position: 429-808
Cow position: chrX:9299308-9298920 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 270
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 87, 282

Conread position: 429-808
Cow position: chrX:25302196-25301836 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 265
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 183, 39

Conread position: 429-810
Cow position: chrX:22888197-22888581 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 108

Conread position: 429-811
Cow position: chrX:34840232-34839860 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 270
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 113, 180

Conread position: 429-817
Cow position: chrX:1978032-1978439 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 279
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 111, 14

Conread position: 429-817
Cow position: chrX:9538081-9538487 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 277
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 103, 52

Conread position: 429-817
Cow position: chrX:9837657-9838067 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 278
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 91, 52

Conread position: 429-817
Cow position: chrX:25329559-25329938 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 272
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 101, 55

Conread position: 429-818
Cow position: chrX:23414849-23414435 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 277
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 64, 272

Conread position: 429-820
Cow position: chrX:6012567-6012177 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 11

Conread position: 429-825
Cow position: chrX:13058098-13058515 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 69

Conread position: 429-830
Cow position: chrX:15114210-15114613 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 102

Conread position: 429-837
Cow position: chrX:37071939-37072352 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 258

Conread position: 429-838
Cow position: chrX:502045-501635 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 147

Conread position: 429-838
Cow position: chrX:26626156-26625725 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 396

Conread position: 429-848
Cow position: chrX:15140009-15139590 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 39

Conread position: 429-851
Cow position: chrX:1055853-1055436 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 55

Conread position: 429-851
Cow position: chrX:12309847-12309427 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 91

Conread position: 429-851
Cow position: chrX:15531613-15531192 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 108

Conread position: 429-851
Cow position: chrX:35409213-35409616 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 53

Conread position: 429-851
Cow position: chrX:37489265-37489687 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 66

Conread position: 429-852
Cow position: chrX:14884423-14883999 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 151

Conread position: 429-852
Cow position: chrX:35937525-35937121 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 71

Conread position: 429-853
Cow position: chrX:15007612-15007189 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 307

Conread position: 429-854
Cow position: chrX:917838-917404 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 262

Conread position: 429-854
Cow position: chrX:4123374-4123799 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 122

Conread position: 429-854
Cow position: chrX:13785844-13785402 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 338

Conread position: 429-854
Cow position: chrX:25337740-25338146 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 25

Conread position: 429-854
Cow position: chrX:30162549-30162958 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 28

Conread position: 429-854
Cow position: chrX:32743084-32743496 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 45

Conread position: 429-858
Cow position: chrX:7805915-7806345 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 193

Conread position: 429-859
Cow position: chrX:40452681-40452243 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 50

Conread position: 429-860
Cow position: chrX:151442-151872 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 84

Conread position: 429-860
Cow position: chrX:10412432-10412019 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 39

Conread position: 429-860
Cow position: chrX:10428079-10428511 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 108

Conread position: 429-860
Cow position: chrX:17497635-17498052 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 325

Conread position: 429-860
Cow position: chrX:20340351-20339922 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 109

Conread position: 429-860
Cow position: chrX:23986787-23987216 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 108

Conread position: 429-860
Cow position: chrX:27705132-27705554 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 81

Conread position: 429-860
Cow position: chrX:27997189-27997618 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 108

Conread position: 429-860
Cow position: chrX:35288193-35288621 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 205

Conread position: 429-860
Cow position: chrX:38051893-38051462 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 108

Conread position: 429-860
Cow position: chrX:38072228-38071797 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 202

Conread position: 429-860
Cow position: chrX:38227554-38227126 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 324

Conread position: 429-861
Cow position: chrX:7277472-7277879 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 39

Conread position: 429-861
Cow position: chrX:35609525-35609956 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 332

Conread position: 429-862
Cow position: chrX:3654147-3654576 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 101

Conread position: 429-862
Cow position: chrX:30133769-30133352 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 132

Conread position: 429-862
Cow position: chrX:34441908-34441483 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 208

Conread position: 429-864
Cow position: chrX:42470398-42469972 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 321

Conread position: 429-865
Cow position: chrX:45658541-45658105 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 108

Conread position: 429-866
Cow position: chrX:11073670-11073219 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 21

Conread position: 429-867
Cow position: chrX:15329192-15329626 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 252

Conread position: 429-868
Cow position: chrX:4633318-4632874 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 203

Conread position: 429-868
Cow position: chrX:28866445-28866027 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 24

Conread position: 429-868
Cow position: chrX:38963652-38964083 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 90

Conread position: 429-869
Cow position: chrX:29289116-29289558 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 39

Conread position: 429-869
Cow position: chrX:32128455-32128012 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 266

Conread position: 429-870
Cow position: chrX:11674594-11675046 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 60

Conread position: 429-872
Cow position: chrX:3154716-3154265 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 296
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 110, 261

Conread position: 429-996
Cow position: chrX:9153899-9154468 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 108

Conread position: 430-564
Cow position: chrX:5392035-5391901 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 430-612
Cow position: chrX:30354930-30355117 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 99, 57

Conread position: 430-641
Cow position: chrX:45992786-45993001 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 37, 0

Conread position: 430-649
Cow position: chrX:39125855-39126073 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 99, 19

Conread position: 430-661
Cow position: chrX:17631293-17631059 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 170
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 87, 69

Conread position: 430-672
Cow position: chrX:18247884-18248122 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 173
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 57, 106

Conread position: 430-715
Cow position: chrX:38067173-38066887 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 0

Conread position: 430-742
Cow position: chrX:19447813-19447492 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 221
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 96, 0

Conread position: 430-766
Cow position: chrX:11377109-11377451 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 230
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 111, 185

Conread position: 430-808
Cow position: chrX:14908551-14908933 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 167

Conread position: 430-810
Cow position: chrX:30965641-30966023 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 107

Conread position: 430-810
Cow position: chrX:32331171-32331549 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 107

Conread position: 430-836
Cow position: chrX:28058254-28057847 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 38

Conread position: 430-851
Cow position: chrX:15260079-15259656 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 107

Conread position: 430-860
Cow position: chrX:671470-671037 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 108

Conread position: 430-860
Cow position: chrX:21686159-21686586 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 108

Conread position: 430-861
Cow position: chrX:35223842-35224263 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 248

Conread position: 430-871
Cow position: chrX:20742527-20742972 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 15

Conread position: 431-626
Cow position: chrX:46698535-46698335 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 50, 118

Conread position: 431-632
Cow position: chrX:21501159-21501365 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 144
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 92, 62

Conread position: 431-648
Cow position: chrX:9911233-9911009 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 94, 193

Conread position: 431-660
Cow position: chrX:6203048-6203279 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 171
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 94, 37

Conread position: 431-662
Cow position: chrX:29031920-29032155 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 176
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 95, 209

Conread position: 431-688
Cow position: chrX:40180330-40180072 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 107

Conread position: 431-725
Cow position: chrX:37760394-37760702 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 225
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 88, 242

Conread position: 431-746
Cow position: chrX:25150728-25151052 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 217
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 92, 0

Conread position: 431-795
Cow position: chrX:626503-626141 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 212

Conread position: 431-807
Cow position: chrX:24826873-24827245 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 262
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 19, 231

Conread position: 431-838
Cow position: chrX:45501685-45502096 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 235

Conread position: 431-854
Cow position: chrX:27516077-27516490 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 53

Conread position: 431-860
Cow position: chrX:12115582-12116013 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 220

Conread position: 431-862
Cow position: chrX:29780286-29780714 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 309

Conread position: 431-865
Cow position: chrX:29876515-29876098 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 295
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 111, 211

Conread position: 432-686
Cow position: chrX:21973479-21973736 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 170
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 94, 218

Conread position: 433-654
Cow position: chrX:17609916-17609693 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 159
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 96, 46

Conread position: 433-669
Cow position: chrX:22603896-22603659 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 0

Conread position: 433-728
Cow position: chrX:42728488-42728791 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 199
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 11, 0

Conread position: 433-746
Cow position: chrX:30139241-30138927 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 104

Conread position: 433-751
Cow position: chrX:39698870-39699189 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 110

Conread position: 433-806
Cow position: chrX:27323317-27322955 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 262
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 104, 40

Conread position: 433-812
Cow position: chrX:38391272-38390904 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 253
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 93, 9

Conread position: 433-836
Cow position: chrX:2932177-2931771 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 104

Conread position: 433-860
Cow position: chrX:14801275-14800846 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 104

Conread position: 433-860
Cow position: chrX:21592830-21593255 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 35

Conread position: 433-869
Cow position: chrX:47144619-47145066 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 298
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 129, 102

Conread position: 434-567
Cow position: chrX:5639393-5639259 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 116, 0

Conread position: 434-585
Cow position: chrX:29907658-29907507 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 86, 97

Conread position: 434-640
Cow position: chrX:27002204-27002409 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 144
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 110, 53

Conread position: 434-642
Cow position: chrX:23988085-23988289 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 434-651
Cow position: chrX:20675643-20675861 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 0

Conread position: 434-661
Cow position: chrX:4553900-4554143 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 168
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 91, 0

Conread position: 434-661
Cow position: chrX:15038266-15038030 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 168
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 156, 0

Conread position: 434-694
Cow position: chrX:22449458-22449724 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 0

Conread position: 434-727
Cow position: chrX:24788166-24787883 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 42

Conread position: 434-754
Cow position: chrX:26878205-26878530 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 32

Conread position: 434-770
Cow position: chrX:24320728-24320395 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 103

Conread position: 434-775
Cow position: chrX:13922986-13923304 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 243
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 227, 45

Conread position: 434-805
Cow position: chrX:2524191-2523813 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 271

Conread position: 434-807
Cow position: chrX:18990230-18989882 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 264
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 221, 34

Conread position: 434-807
Cow position: chrX:24193661-24194022 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 263
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 92, 17

Conread position: 434-808
Cow position: chrX:33631698-33632095 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 262
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 39, 178

Conread position: 434-810
Cow position: chrX:37061247-37060869 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 103

Conread position: 434-828
Cow position: chrX:30531486-30531088 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 94

Conread position: 434-836
Cow position: chrX:22538410-22538008 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 343

Conread position: 434-836
Cow position: chrX:29777586-29777989 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 103

Conread position: 434-851
Cow position: chrX:19022765-19022346 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 0

Conread position: 434-854
Cow position: chrX:16703215-16703636 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 34

Conread position: 434-854
Cow position: chrX:30143740-30143319 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 106

Conread position: 434-860
Cow position: chrX:16465844-16466273 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 387

Conread position: 434-860
Cow position: chrX:24200739-24201154 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 86

Conread position: 434-860
Cow position: chrX:27446239-27446663 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 41

Conread position: 434-860
Cow position: chrX:29903286-29903715 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 103

Conread position: 434-860
Cow position: chrX:37816133-37816560 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 34

Conread position: 434-860
Cow position: chrX:44054348-44054774 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 204

Conread position: 434-867
Cow position: chrX:30822128-30822564 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 103

Conread position: 434-868
Cow position: chrX:5871861-5872296 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 62

Conread position: 435-629
Cow position: chrX:32329567-32329760 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 149
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 89, 0

Conread position: 435-660
Cow position: chrX:7513036-7513262 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 0

Conread position: 435-759
Cow position: chrX:4415394-4415712 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 236
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 96, 191

Conread position: 435-808
Cow position: chrX:41049652-41050034 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 113

Conread position: 435-810
Cow position: chrX:6652526-6652150 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 33

Conread position: 436-535
Cow position: chrX:10465331-10465430 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 436-553
Cow position: chrX:39730594-39730477 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 111, 101

Conread position: 436-556
Cow position: chrX:3081585-3081465 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 111, 101

Conread position: 436-556
Cow position: chrX:9227535-9227415 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 436-565
Cow position: chrX:30060434-30060563 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 97
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 436-567
Cow position: chrX:16782826-16782957 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 436-567
Cow position: chrX:38007432-38007301 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 99
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 436-574
Cow position: chrX:29859401-29859263 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 111, 101

Conread position: 436-576
Cow position: chrX:18551452-18551592 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 111, 101

Conread position: 436-576
Cow position: chrX:38584273-38584413 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 111, 101

Conread position: 436-578
Cow position: chrX:2293054-2292912 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 111, 101

Conread position: 436-587
Cow position: chrX:865942-866093 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 436-588
Cow position: chrX:21459059-21458907 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 121
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 111, 101

Conread position: 436-591
Cow position: chrX:19333599-19333444 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 124
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 111, 101

Conread position: 436-595
Cow position: chrX:36202937-36203094 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 103, 0

Conread position: 436-596
Cow position: chrX:34797580-34797740 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 436-602
Cow position: chrX:18194236-18194402 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 111, 94

Conread position: 436-602
Cow position: chrX:23451909-23451745 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 42, 0

Conread position: 436-605
Cow position: chrX:2579965-2580133 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 111, 26

Conread position: 436-609
Cow position: chrX:16808289-16808117 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 142
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 111, 19

Conread position: 436-616
Cow position: chrX:9072760-9072945 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 91, 32

Conread position: 436-617
Cow position: chrX:9641886-9641705 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 141
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 111, 101

Conread position: 436-619
Cow position: chrX:6581480-6581663 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 149
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 111, 101

Conread position: 436-626
Cow position: chrX:20954074-20954262 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 147
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 37, 16

Conread position: 436-629
Cow position: chrX:20726306-20726499 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 157
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 436-634
Cow position: chrX:23666729-23666927 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 95, 69

Conread position: 436-638
Cow position: chrX:44568537-44568742 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 20, 179

Conread position: 436-639
Cow position: chrX:28706648-28706851 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 122
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 111, 101

Conread position: 436-641
Cow position: chrX:35441091-35441302 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 91, 0

Conread position: 436-641
Cow position: chrX:38961300-38961096 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-643
Cow position: chrX:12980801-12980594 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 436-647
Cow position: chrX:22901119-22900902 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 167
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 43, 107

Conread position: 436-647
Cow position: chrX:36975390-36975601 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 436-648
Cow position: chrX:13030095-13029883 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 163
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 436-648
Cow position: chrX:18488168-18487956 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-649
Cow position: chrX:42499528-42499306 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 168
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 92, 0

Conread position: 436-650
Cow position: chrX:13928207-13927995 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 159
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 111, 32

Conread position: 436-650
Cow position: chrX:16086578-16086364 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 436-653
Cow position: chrX:26752373-26752154 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 166
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 56, 0

Conread position: 436-654
Cow position: chrX:38999442-38999661 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 99, 177

Conread position: 436-655
Cow position: chrX:22409174-22408950 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 157
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 90, 0

Conread position: 436-656
Cow position: chrX:17663372-17663146 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 174
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 104, 0

Conread position: 436-657
Cow position: chrX:3596521-3596300 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-659
Cow position: chrX:30688611-30688834 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-660
Cow position: chrX:30825194-30825418 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-661
Cow position: chrX:28624213-28623991 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 167
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 53, 46

Conread position: 436-667
Cow position: chrX:43980291-43980529 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 176
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 98, 191

Conread position: 436-669
Cow position: chrX:2048649-2048889 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 181
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 202, 0

Conread position: 436-669
Cow position: chrX:28503882-28504106 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 173
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 111, 102

Conread position: 436-679
Cow position: chrX:37905551-37905809 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 178
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 69, 0

Conread position: 436-684
Cow position: chrX:12691113-12690864 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-685
Cow position: chrX:41114743-41115000 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 177
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 52, 47

Conread position: 436-686
Cow position: chrX:40224697-40224447 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-687
Cow position: chrX:2715168-2715420 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-687
Cow position: chrX:12008136-12007884 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 0

Conread position: 436-688
Cow position: chrX:11461325-11461074 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 80

Conread position: 436-688
Cow position: chrX:19399324-19399577 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-688
Cow position: chrX:22521675-22521422 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-688
Cow position: chrX:22522285-22522032 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-688
Cow position: chrX:23341447-23341199 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 78

Conread position: 436-688
Cow position: chrX:28313971-28314224 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-688
Cow position: chrX:34993716-34993978 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 192
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 99, 235

Conread position: 436-688
Cow position: chrX:39185719-39185972 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-691
Cow position: chrX:15232087-15231826 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 127

Conread position: 436-691
Cow position: chrX:17291476-17291731 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 163
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 111, 101

Conread position: 436-691
Cow position: chrX:30093818-30093564 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 201

Conread position: 436-692
Cow position: chrX:42530360-42530109 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 32

Conread position: 436-698
Cow position: chrX:26728401-26728663 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 162
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 111, 101

Conread position: 436-715
Cow position: chrX:10440296-10440013 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 78

Conread position: 436-717
Cow position: chrX:7572926-7573207 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 200
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 225, 32

Conread position: 436-727
Cow position: chrX:48423481-48423773 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-728
Cow position: chrX:14030564-14030854 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-728
Cow position: chrX:36794540-36794833 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 256

Conread position: 436-746
Cow position: chrX:15308457-15308142 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 200
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 22, 31

Conread position: 436-751
Cow position: chrX:23135123-23135434 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 0

Conread position: 436-751
Cow position: chrX:24467579-24467263 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-751
Cow position: chrX:36514008-36514314 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 157

Conread position: 436-754
Cow position: chrX:5566278-5565960 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 217
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 73, 82

Conread position: 436-754
Cow position: chrX:6558396-6558718 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-754
Cow position: chrX:10822075-10821753 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 207
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 78, 32

Conread position: 436-754
Cow position: chrX:16853843-16853524 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 104

Conread position: 436-754
Cow position: chrX:18451533-18451214 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-754
Cow position: chrX:24006281-24005962 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 223
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 93, 32

Conread position: 436-754
Cow position: chrX:26506395-26506079 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-754
Cow position: chrX:26617375-26617056 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-754
Cow position: chrX:29912885-29913204 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 0

Conread position: 436-754
Cow position: chrX:30052923-30052604 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-758
Cow position: chrX:3208015-3207693 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 232
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 101, 9

Conread position: 436-758
Cow position: chrX:9403648-9403986 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 0

Conread position: 436-760
Cow position: chrX:27749463-27749139 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-767
Cow position: chrX:20801318-20801656 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 32

Conread position: 436-770
Cow position: chrX:6454242-6454576 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 60

Conread position: 436-770
Cow position: chrX:7097004-7097338 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-770
Cow position: chrX:10915584-10915919 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 101

Conread position: 436-770
Cow position: chrX:15620986-15620650 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-770
Cow position: chrX:15718131-15717800 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 172

Conread position: 436-770
Cow position: chrX:21343940-21344275 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-770
Cow position: chrX:22568471-22568138 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-770
Cow position: chrX:28559288-28558956 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 90

Conread position: 436-770
Cow position: chrX:40591232-40591567 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-773
Cow position: chrX:20957561-20957897 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 238
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 99, 170

Conread position: 436-773
Cow position: chrX:41790886-41790561 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 72

Conread position: 436-773
Cow position: chrX:41846988-41846650 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 24

Conread position: 436-775
Cow position: chrX:2486084-2485745 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 71

Conread position: 436-775
Cow position: chrX:3569997-3570335 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 256

Conread position: 436-777
Cow position: chrX:22115739-22115394 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 84

Conread position: 436-780
Cow position: chrX:32144616-32144272 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 15

Conread position: 436-782
Cow position: chrX:41122616-41122962 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 103

Conread position: 436-788
Cow position: chrX:47368702-47368350 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 241
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 91, 203

Conread position: 436-798
Cow position: chrX:3096209-3095861 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 104

Conread position: 436-799
Cow position: chrX:37403477-37403112 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-801
Cow position: chrX:22811432-22811797 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 244

Conread position: 436-801
Cow position: chrX:23316874-23316509 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 200

Conread position: 436-805
Cow position: chrX:5408601-5408971 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 98

Conread position: 436-805
Cow position: chrX:16279195-16279566 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 100

Conread position: 436-805
Cow position: chrX:16735070-16735441 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-805
Cow position: chrX:19109495-19109124 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-805
Cow position: chrX:23109310-23109676 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 14

Conread position: 436-805
Cow position: chrX:24735490-24735855 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 32

Conread position: 436-805
Cow position: chrX:32623106-32623498 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 114

Conread position: 436-805
Cow position: chrX:36535189-36534818 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 0

Conread position: 436-806
Cow position: chrX:12360434-12360806 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-806
Cow position: chrX:12458243-12458615 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 102

Conread position: 436-806
Cow position: chrX:24447358-24447718 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 46

Conread position: 436-807
Cow position: chrX:16733204-16732818 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 262
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 99, 32

Conread position: 436-807
Cow position: chrX:47317952-47318323 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-808
Cow position: chrX:24169774-24169395 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 129

Conread position: 436-810
Cow position: chrX:1976051-1975675 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-810
Cow position: chrX:5646558-5646182 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-810
Cow position: chrX:5892774-5893150 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-810
Cow position: chrX:9128602-9128978 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-810
Cow position: chrX:10923025-10922649 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-810
Cow position: chrX:11566460-11566836 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-810
Cow position: chrX:11715916-11715540 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 0

Conread position: 436-810
Cow position: chrX:15781127-15781503 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-810
Cow position: chrX:16074134-16074498 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 101

Conread position: 436-810
Cow position: chrX:17783045-17783421 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-810
Cow position: chrX:19774934-19774558 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-810
Cow position: chrX:20098868-20099244 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-810
Cow position: chrX:21768350-21768726 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-810
Cow position: chrX:22609046-22608670 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-810
Cow position: chrX:27759253-27759629 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 98

Conread position: 436-810
Cow position: chrX:28555889-28555513 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 0

Conread position: 436-810
Cow position: chrX:30196843-30197219 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-810
Cow position: chrX:30816723-30816347 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-810
Cow position: chrX:37772888-37772511 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-810
Cow position: chrX:43510962-43511341 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 205

Conread position: 436-811
Cow position: chrX:3157164-3157540 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-811
Cow position: chrX:18950194-18949823 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 79

Conread position: 436-814
Cow position: chrX:35633208-35632831 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 56

Conread position: 436-816
Cow position: chrX:44019240-44019626 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 252
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 14, 245

Conread position: 436-823
Cow position: chrX:3387652-3388040 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 385

Conread position: 436-823
Cow position: chrX:6196208-6195819 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-823
Cow position: chrX:12001601-12001212 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-823
Cow position: chrX:15346423-15346034 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-823
Cow position: chrX:22557047-22557436 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-823
Cow position: chrX:31605230-31605619 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-823
Cow position: chrX:36195638-36196027 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 102

Conread position: 436-826
Cow position: chrX:12466041-12466431 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 300

Conread position: 436-828
Cow position: chrX:10528228-10527835 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-828
Cow position: chrX:34761612-34762006 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-829
Cow position: chrX:28646437-28646046 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 358, 104

Conread position: 436-830
Cow position: chrX:8483636-8484020 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-830
Cow position: chrX:36729930-36730326 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-831
Cow position: chrX:1331482-1331878 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 32

Conread position: 436-831
Cow position: chrX:4905444-4905048 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 105

Conread position: 436-831
Cow position: chrX:24280480-24280884 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 392

Conread position: 436-831
Cow position: chrX:24317612-24318003 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 17

Conread position: 436-831
Cow position: chrX:24587908-24587511 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 245

Conread position: 436-831
Cow position: chrX:30180380-30179985 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 104

Conread position: 436-833
Cow position: chrX:29915679-29915281 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 182

Conread position: 436-836
Cow position: chrX:361907-361505 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-836
Cow position: chrX:1781451-1781854 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-836
Cow position: chrX:2160311-2160713 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 100

Conread position: 436-836
Cow position: chrX:2417937-2417536 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 32

Conread position: 436-836
Cow position: chrX:2664555-2664957 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-836
Cow position: chrX:5306147-5306547 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 37

Conread position: 436-836
Cow position: chrX:5599432-5599030 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-836
Cow position: chrX:5866692-5867093 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-836
Cow position: chrX:7311539-7311941 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-836
Cow position: chrX:9011873-9012275 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-836
Cow position: chrX:11358519-11358117 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-836
Cow position: chrX:11949947-11949549 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 256

Conread position: 436-836
Cow position: chrX:16478461-16478850 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 101

Conread position: 436-836
Cow position: chrX:17055115-17055517 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 104

Conread position: 436-836
Cow position: chrX:17995005-17995407 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-836
Cow position: chrX:18024586-18024987 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-836
Cow position: chrX:18898105-18897708 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 104

Conread position: 436-836
Cow position: chrX:20021123-20021511 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-836
Cow position: chrX:21833430-21833833 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 385

Conread position: 436-836
Cow position: chrX:23121929-23122334 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 183

Conread position: 436-836
Cow position: chrX:24509413-24509815 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-836
Cow position: chrX:28518175-28517777 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 32

Conread position: 436-836
Cow position: chrX:29169795-29169386 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 106

Conread position: 436-836
Cow position: chrX:29849085-29848685 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 256

Conread position: 436-836
Cow position: chrX:30159449-30159063 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 71

Conread position: 436-836
Cow position: chrX:33763890-33764292 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 0

Conread position: 436-836
Cow position: chrX:37958043-37958445 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-836
Cow position: chrX:38151234-38151637 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 245

Conread position: 436-836
Cow position: chrX:41488619-41488217 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-836
Cow position: chrX:44168764-44168361 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-837
Cow position: chrX:6543803-6544200 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 49

Conread position: 436-837
Cow position: chrX:11819910-11820300 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 14

Conread position: 436-838
Cow position: chrX:21227020-21227420 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-838
Cow position: chrX:41733649-41733248 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 281
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 86, 39

Conread position: 436-839
Cow position: chrX:24975490-24975886 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 80

Conread position: 436-851
Cow position: chrX:2274463-2274880 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-851
Cow position: chrX:4622408-4621991 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-851
Cow position: chrX:5406605-5407018 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 32

Conread position: 436-851
Cow position: chrX:8591088-8591508 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 32

Conread position: 436-851
Cow position: chrX:18656259-18655842 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 0

Conread position: 436-851
Cow position: chrX:19473614-19473197 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 71

Conread position: 436-851
Cow position: chrX:27594634-27594219 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-851
Cow position: chrX:42120849-42121266 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-852
Cow position: chrX:37133988-37133570 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 384

Conread position: 436-853
Cow position: chrX:3649262-3648854 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 201

Conread position: 436-853
Cow position: chrX:27977285-27976866 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 258

Conread position: 436-853
Cow position: chrX:34532077-34532481 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 236

Conread position: 436-853
Cow position: chrX:40121457-40121054 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 68

Conread position: 436-853
Cow position: chrX:45413103-45412699 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 371, 52

Conread position: 436-854
Cow position: chrX:5353757-5353336 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 256

Conread position: 436-854
Cow position: chrX:10866321-10865906 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 246

Conread position: 436-854
Cow position: chrX:14162737-14163157 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 257

Conread position: 436-854
Cow position: chrX:14598392-14598811 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 91

Conread position: 436-854
Cow position: chrX:16711501-16711920 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 32

Conread position: 436-854
Cow position: chrX:18078365-18077944 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 105

Conread position: 436-854
Cow position: chrX:22493553-22493973 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 384

Conread position: 436-854
Cow position: chrX:23386993-23386581 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 245

Conread position: 436-854
Cow position: chrX:23396152-23396564 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 245

Conread position: 436-854
Cow position: chrX:24441704-24441281 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 112

Conread position: 436-854
Cow position: chrX:31202386-31202806 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 384

Conread position: 436-854
Cow position: chrX:35240410-35240828 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 245

Conread position: 436-854
Cow position: chrX:41103334-41103752 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 256

Conread position: 436-854
Cow position: chrX:41156857-41157277 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 256

Conread position: 436-854
Cow position: chrX:45786676-45787092 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 256

Conread position: 436-855
Cow position: chrX:30163693-30163273 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 286

Conread position: 436-857
Cow position: chrX:46297206-46297629 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-858
Cow position: chrX:7119098-7118674 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-860
Cow position: chrX:3361367-3361790 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 87

Conread position: 436-860
Cow position: chrX:3417592-3417168 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 32

Conread position: 436-860
Cow position: chrX:4343295-4343721 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-860
Cow position: chrX:4869104-4869515 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 133

Conread position: 436-860
Cow position: chrX:5123813-5123389 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 106

Conread position: 436-860
Cow position: chrX:6372727-6373152 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 323

Conread position: 436-860
Cow position: chrX:6870017-6869590 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-860
Cow position: chrX:8434658-8434235 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 99

Conread position: 436-860
Cow position: chrX:10932219-10932644 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 32

Conread position: 436-860
Cow position: chrX:11145791-11145366 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 32

Conread position: 436-860
Cow position: chrX:14122205-14121780 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-860
Cow position: chrX:14134021-14134447 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-860
Cow position: chrX:14462855-14463285 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 105

Conread position: 436-860
Cow position: chrX:15120341-15119917 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 32

Conread position: 436-860
Cow position: chrX:21785315-21785735 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 32

Conread position: 436-860
Cow position: chrX:22772201-22772627 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-860
Cow position: chrX:23299501-23299926 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 105

Conread position: 436-860
Cow position: chrX:25459091-25458665 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 384

Conread position: 436-860
Cow position: chrX:26275685-26276111 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-860
Cow position: chrX:27305473-27305898 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-860
Cow position: chrX:29841623-29841197 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 256

Conread position: 436-860
Cow position: chrX:31814343-31813917 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-860
Cow position: chrX:31978295-31977874 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 30

Conread position: 436-860
Cow position: chrX:35533397-35533823 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-860
Cow position: chrX:35680891-35681308 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 32

Conread position: 436-860
Cow position: chrX:38230721-38230295 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-860
Cow position: chrX:39560106-39559680 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-860
Cow position: chrX:40481324-40480901 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 44

Conread position: 436-860
Cow position: chrX:42994166-42994580 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 38

Conread position: 436-860
Cow position: chrX:45237012-45237438 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 104

Conread position: 436-860
Cow position: chrX:45903723-45904150 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 102

Conread position: 436-860
Cow position: chrX:47873787-47873369 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 117

Conread position: 436-861
Cow position: chrX:323461-323870 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 212

Conread position: 436-862
Cow position: chrX:42462203-42461776 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 326

Conread position: 436-864
Cow position: chrX:6493278-6493706 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 224

Conread position: 436-864
Cow position: chrX:27095665-27096089 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 226

Conread position: 436-866
Cow position: chrX:9018757-9018324 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-866
Cow position: chrX:27404399-27403967 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-867
Cow position: chrX:1576717-1576283 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-867
Cow position: chrX:2151386-2150956 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-867
Cow position: chrX:3372307-3371878 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-867
Cow position: chrX:6566620-6567054 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-867
Cow position: chrX:8641334-8641767 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-867
Cow position: chrX:9169068-9168634 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-867
Cow position: chrX:11663724-11664158 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-867
Cow position: chrX:15172981-15172553 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-867
Cow position: chrX:18462429-18461996 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-867
Cow position: chrX:24969270-24968836 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-867
Cow position: chrX:25276953-25276519 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 385

Conread position: 436-867
Cow position: chrX:25289133-25288699 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-867
Cow position: chrX:26760022-26759589 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 116

Conread position: 436-867
Cow position: chrX:27626901-27627335 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-867
Cow position: chrX:30752320-30752754 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-867
Cow position: chrX:34285518-34285083 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-867
Cow position: chrX:38014640-38015074 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-867
Cow position: chrX:42591271-42591707 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 101

Conread position: 436-868
Cow position: chrX:14458621-14458192 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-868
Cow position: chrX:28024809-28025243 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-868
Cow position: chrX:29226024-29226456 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 23

Conread position: 436-868
Cow position: chrX:42459718-42460163 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-869
Cow position: chrX:8530086-8530520 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 101

Conread position: 436-870
Cow position: chrX:20032285-20031853 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-871
Cow position: chrX:37764651-37764211 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-873
Cow position: chrX:5320173-5319728 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 49

Conread position: 436-873
Cow position: chrX:16285757-16286197 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 101

Conread position: 436-875
Cow position: chrX:2559414-2558974 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 101

Conread position: 436-877
Cow position: chrX:5289141-5288696 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 106

Conread position: 436-877
Cow position: chrX:22612932-22613376 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-878
Cow position: chrX:3464530-3464085 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-887
Cow position: chrX:15091223-15090768 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 98

Conread position: 436-898
Cow position: chrX:2103951-2104413 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-908
Cow position: chrX:26531505-26531980 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 67

Conread position: 436-922
Cow position: chrX:12145641-12146128 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 436-932
Cow position: chrX:7486410-7486907 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 201

Conread position: 436-932
Cow position: chrX:30981622-30981122 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 84

Conread position: 437-560
Cow position: chrX:1691144-1691268 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 36, 101

Conread position: 437-622
Cow position: chrX:18712079-18712270 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 88, 0

Conread position: 437-644
Cow position: chrX:38705108-38705322 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 81, 181

Conread position: 437-647
Cow position: chrX:39352108-39351891 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 79, 207

Conread position: 437-648
Cow position: chrX:33589681-33589897 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 170
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 103, 75

Conread position: 437-649
Cow position: chrX:21815710-21815928 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 164
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 98, 0

Conread position: 437-649
Cow position: chrX:39939207-39938991 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 166
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 91, 180

Conread position: 437-660
Cow position: chrX:12724314-12724537 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 81, 63

Conread position: 437-660
Cow position: chrX:33815693-33815918 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 168
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 90, 187

Conread position: 437-661
Cow position: chrX:35847763-35847986 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 171
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 35, 0

Conread position: 437-674
Cow position: chrX:23038450-23038212 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 0

Conread position: 437-688
Cow position: chrX:34222298-34222548 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 67

Conread position: 437-727
Cow position: chrX:3223501-3223213 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 202
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 100, 215

Conread position: 437-754
Cow position: chrX:22600866-22600552 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 5

Conread position: 437-754
Cow position: chrX:39288628-39288303 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 223
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 51, 0

Conread position: 437-758
Cow position: chrX:43800500-43800181 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 205
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 89, 82

Conread position: 437-767
Cow position: chrX:22330030-22329691 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 236
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 35, 179

Conread position: 437-799
Cow position: chrX:3396227-3395859 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 252
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 98, 257

Conread position: 437-807
Cow position: chrX:25205251-25205636 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 361

Conread position: 437-807
Cow position: chrX:27760888-27761259 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 48

Conread position: 437-807
Cow position: chrX:43648211-43647829 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 308

Conread position: 437-808
Cow position: chrX:29010277-29010650 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 250
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 13, 46

Conread position: 437-810
Cow position: chrX:10444868-10444492 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 100

Conread position: 437-817
Cow position: chrX:17743617-17743989 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 87

Conread position: 437-836
Cow position: chrX:27590486-27590092 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 200

Conread position: 437-836
Cow position: chrX:32039295-32038895 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 61

Conread position: 437-836
Cow position: chrX:37852686-37853079 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 100

Conread position: 437-837
Cow position: chrX:15596599-15596988 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 36

Conread position: 437-838
Cow position: chrX:34238267-34238666 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 102

Conread position: 437-838
Cow position: chrX:44086851-44087255 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 0

Conread position: 437-845
Cow position: chrX:42585515-42585119 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 279
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 86, 17

Conread position: 437-851
Cow position: chrX:5334272-5333858 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 186

Conread position: 437-851
Cow position: chrX:42733413-42733820 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 100

Conread position: 437-853
Cow position: chrX:20878215-20877798 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 114

Conread position: 437-853
Cow position: chrX:45113181-45113579 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 202

Conread position: 437-854
Cow position: chrX:30455075-30454656 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 103

Conread position: 437-860
Cow position: chrX:7444631-7445055 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 100

Conread position: 437-860
Cow position: chrX:11455520-11455080 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 296
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 208, 83

Conread position: 437-860
Cow position: chrX:16359462-16359043 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 366, 216

Conread position: 437-860
Cow position: chrX:43408546-43408973 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 284
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 92, 39

Conread position: 437-860
Cow position: chrX:48287884-48287482 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 101

Conread position: 437-863
Cow position: chrX:39558819-39558381 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 31

Conread position: 437-867
Cow position: chrX:13071057-13070622 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 103

Conread position: 437-867
Cow position: chrX:13091617-13091182 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 103

Conread position: 437-867
Cow position: chrX:24769313-24768884 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 100

Conread position: 437-867
Cow position: chrX:30199445-30199012 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 0

Conread position: 437-869
Cow position: chrX:19019556-19019127 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 221

Conread position: 437-869
Cow position: chrX:24288366-24287949 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 206

Conread position: 437-871
Cow position: chrX:12347424-12347860 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 101

Conread position: 438-611
Cow position: chrX:30729950-30729775 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 97, 13

Conread position: 438-654
Cow position: chrX:45566156-45566372 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 438-670
Cow position: chrX:40717488-40717718 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 159
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 203, 83

Conread position: 438-754
Cow position: chrX:25738609-25738923 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 207
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 131, 96

Conread position: 438-758
Cow position: chrX:7108461-7108786 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 212
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 84, 229

Conread position: 438-758
Cow position: chrX:33837134-33837453 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 205
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 85, 69

Conread position: 438-770
Cow position: chrX:38330930-38331261 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 99

Conread position: 438-798
Cow position: chrX:34435484-34435143 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 236
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 223, 76

Conread position: 438-805
Cow position: chrX:17964968-17964607 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 69

Conread position: 438-807
Cow position: chrX:2146862-2147252 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 263
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 103, 24

Conread position: 438-807
Cow position: chrX:26755081-26754714 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 102

Conread position: 438-807
Cow position: chrX:30228562-30228192 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 157

Conread position: 438-808
Cow position: chrX:30085704-30085348 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 250
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 277, 81

Conread position: 438-810
Cow position: chrX:14407902-14407530 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 255

Conread position: 438-828
Cow position: chrX:26974458-26974850 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 99

Conread position: 438-836
Cow position: chrX:13405749-13405368 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 274
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 174, 206

Conread position: 438-851
Cow position: chrX:34413324-34413739 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 99

Conread position: 438-853
Cow position: chrX:23572252-23571835 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 0

Conread position: 438-854
Cow position: chrX:29942698-29943117 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 35

Conread position: 438-860
Cow position: chrX:7551247-7550824 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 102

Conread position: 438-860
Cow position: chrX:8899573-8899997 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 106

Conread position: 438-860
Cow position: chrX:12249349-12249769 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 299

Conread position: 438-862
Cow position: chrX:24424848-24424420 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 183

Conread position: 438-867
Cow position: chrX:34519274-34519706 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 0

Conread position: 438-872
Cow position: chrX:4996163-4996578 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 42

Conread position: 438-922
Cow position: chrX:30172160-30171676 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 40

Conread position: 439-655
Cow position: chrX:27070318-27070104 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 93, 37

Conread position: 439-661
Cow position: chrX:32430886-32431104 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 153
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 205, 15

Conread position: 439-694
Cow position: chrX:27117512-27117768 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 185

Conread position: 439-752
Cow position: chrX:11373451-11373145 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 202
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 70, 95

Conread position: 439-754
Cow position: chrX:8926263-8926583 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 201
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 87, 176

Conread position: 439-754
Cow position: chrX:16354801-16354483 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 210
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 19, 24

Conread position: 439-758
Cow position: chrX:17082863-17082538 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 215
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 93, 135

Conread position: 439-758
Cow position: chrX:23218623-23218946 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 221
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 63, 126

Conread position: 439-758
Cow position: chrX:42084551-42084876 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 216
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 88, 20

Conread position: 439-759
Cow position: chrX:19741963-19741633 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 220
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 24, 305

Conread position: 439-759
Cow position: chrX:20590529-20590849 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 214
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 88, 29

Conread position: 439-759
Cow position: chrX:39952793-39952480 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 217
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 22, 15

Conread position: 439-773
Cow position: chrX:7809460-7809118 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 184

Conread position: 439-805
Cow position: chrX:12852957-12852594 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 247
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 24, 13

Conread position: 439-813
Cow position: chrX:40517135-40517500 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 242
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 87, 160

Conread position: 439-830
Cow position: chrX:28632928-28632546 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 98

Conread position: 439-837
Cow position: chrX:35268444-35268826 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 10

Conread position: 439-851
Cow position: chrX:28752791-28752376 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 307

Conread position: 439-860
Cow position: chrX:38094976-38094554 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 243

Conread position: 440-611
Cow position: chrX:13122648-13122823 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 89, 105

Conread position: 440-807
Cow position: chrX:160490-160119 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 34

Conread position: 440-861
Cow position: chrX:45043108-45043529 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 237

Conread position: 441-933
Cow position: chrX:13686269-13686763 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 16

Conread position: 442-660
Cow position: chrX:41884884-41884666 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 169
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 207, 40

Conread position: 442-671
Cow position: chrX:35678769-35679005 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 163
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 16, 21

Conread position: 442-730
Cow position: chrX:42222016-42221732 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 239

Conread position: 442-743
Cow position: chrX:20976515-20976211 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 221
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 84, 210

Conread position: 442-797
Cow position: chrX:19022979-19023344 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 153

Conread position: 442-805
Cow position: chrX:19210843-19210480 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 252
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 84, 26

Conread position: 442-807
Cow position: chrX:44930193-44930553 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 42

Conread position: 442-810
Cow position: chrX:23280559-23280925 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 106

Conread position: 442-836
Cow position: chrX:6655715-6655319 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 118

Conread position: 442-853
Cow position: chrX:16078221-16078624 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 47

Conread position: 442-854
Cow position: chrX:1947169-1946750 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 250

Conread position: 442-860
Cow position: chrX:2945318-2944896 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 380

Conread position: 442-860
Cow position: chrX:14781794-14781373 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 96

Conread position: 442-860
Cow position: chrX:46532968-46532534 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 250

Conread position: 442-861
Cow position: chrX:40827193-40826784 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 78

Conread position: 442-862
Cow position: chrX:47989312-47989730 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 272
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 40, 49

Conread position: 442-867
Cow position: chrX:26229952-26229534 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 95

Conread position: 442-931
Cow position: chrX:11672333-11672823 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 95

Conread position: 443-599
Cow position: chrX:20709586-20709747 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 82, 25

Conread position: 443-869
Cow position: chrX:22812615-22813046 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 219

Conread position: 444-751
Cow position: chrX:34554289-34554590 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 162

Conread position: 444-758
Cow position: chrX:36720139-36719825 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 204
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 83, 13

Conread position: 444-810
Cow position: chrX:27318770-27319138 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 93

Conread position: 444-860
Cow position: chrX:21666037-21665625 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 181

Conread position: 444-861
Cow position: chrX:23564243-23563823 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 414

Conread position: 445-661
Cow position: chrX:1729020-1728796 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 75, 29

Conread position: 445-729
Cow position: chrX:5808586-5808307 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 194
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 151, 84

Conread position: 445-746
Cow position: chrX:23382628-23382315 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 203
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 16, 215

Conread position: 445-754
Cow position: chrX:15988280-15987970 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 206
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 68, 28

Conread position: 445-773
Cow position: chrX:37575865-37576199 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 222
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 81, 321

Conread position: 445-817
Cow position: chrX:36692794-36693159 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 252
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 127, 89

Conread position: 445-860
Cow position: chrX:38936247-38936664 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 23

Conread position: 446-758
Cow position: chrX:8703421-8703107 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 208
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 81, 62

Conread position: 446-775
Cow position: chrX:19320141-19320474 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 215
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 83, 22

Conread position: 446-810
Cow position: chrX:17980151-17980517 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 91

Conread position: 446-820
Cow position: chrX:37906500-37906894 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 264
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 76, 388

Conread position: 446-858
Cow position: chrX:4044302-4043889 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 250

Conread position: 447-648
Cow position: chrX:40035912-40035713 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 156
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 62, 0

Conread position: 447-654
Cow position: chrX:3130123-3130328 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 447-661
Cow position: chrX:2383017-2383222 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 72

Conread position: 447-751
Cow position: chrX:16790260-16789976 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 88

Conread position: 447-827
Cow position: chrX:24105184-24105562 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 111

Conread position: 447-836
Cow position: chrX:13396694-13396304 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 42

Conread position: 447-847
Cow position: chrX:45967718-45968114 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 307

Conread position: 447-854
Cow position: chrX:34754635-34754228 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 373

Conread position: 448-853
Cow position: chrX:10438093-10437699 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 190

Conread position: 448-860
Cow position: chrX:28847324-28846914 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 195

Conread position: 449-626
Cow position: chrX:43049681-43049855 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 31, 0

Conread position: 449-629
Cow position: chrX:40475282-40475102 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 141
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 449-860
Cow position: chrX:15439090-15438681 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 91

Conread position: 449-860
Cow position: chrX:28133908-28134313 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 298, 195

Conread position: 449-860
Cow position: chrX:38439035-38439445 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 86

Conread position: 450-625
Cow position: chrX:33799453-33799629 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 138
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 10, 87

Conread position: 450-746
Cow position: chrX:35832966-35833266 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 196
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 76, 5

Conread position: 450-766
Cow position: chrX:8103076-8102763 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 205
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 73, 101

Conread position: 450-806
Cow position: chrX:23139873-23140228 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 87

Conread position: 450-828
Cow position: chrX:47607973-47608354 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 88

Conread position: 450-851
Cow position: chrX:13384967-13385370 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 87

Conread position: 451-861
Cow position: chrX:37231972-37232381 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 187

Conread position: 452-640
Cow position: chrX:41682917-41683111 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 83, 0

Conread position: 452-807
Cow position: chrX:40515467-40515808 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 253
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 83, 45

Conread position: 452-860
Cow position: chrX:5017842-5017447 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 453-689
Cow position: chrX:43730631-43730392 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 71

Conread position: 454-751
Cow position: chrX:12096682-12096386 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 105

Conread position: 454-794
Cow position: chrX:2649483-2649837 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 224
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 12, 0

Conread position: 454-810
Cow position: chrX:24809406-24809049 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 86

Conread position: 454-823
Cow position: chrX:13447834-13448205 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 83

Conread position: 455-811
Cow position: chrX:5375934-5376292 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 237

Conread position: 459-860
Cow position: chrX:20321198-20320796 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 78

Conread position: 459-860
Cow position: chrX:26441211-26440811 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 317

Conread position: 459-867
Cow position: chrX:46579286-46578875 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 78

Conread position: 462-653
Cow position: chrX:31338511-31338707 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 68, 0

Conread position: 462-758
Cow position: chrX:5111845-5111549 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 196
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 74, 6

Conread position: 463-660
Cow position: chrX:16284407-16284203 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 83, 0

Conread position: 463-688
Cow position: chrX:25966622-25966854 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 171
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 61, 189

Conread position: 463-804
Cow position: chrX:41377184-41377523 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 217
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 199, 60

Conread position: 463-858
Cow position: chrX:36840434-36840841 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 230

Conread position: 464-766
Cow position: chrX:37544516-37544824 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 210
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 66, 185

Conread position: 465-743
Cow position: chrX:43217964-43218249 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 204
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 17, 0

Conread position: 465-762
Cow position: chrX:24886913-24886628 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 197
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 246, 64

Conread position: 465-861
Cow position: chrX:15486050-15485657 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 172

Conread position: 466-762
Cow position: chrX:39556239-39555943 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 27

Conread position: 466-774
Cow position: chrX:24102556-24102864 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 23

Conread position: 466-861
Cow position: chrX:3653341-3653726 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 118

Conread position: 468-610
Cow position: chrX:11590044-11589904 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 86, 0

Conread position: 468-642
Cow position: chrX:45448234-45448408 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 79, 68

Conread position: 468-661
Cow position: chrX:20167731-20167925 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 160
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 468-664
Cow position: chrX:44206863-44207054 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 194, 16

Conread position: 468-707
Cow position: chrX:30134910-30134670 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 180
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 189, 216

Conread position: 468-748
Cow position: chrX:24292093-24291823 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 205
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 193, 70

Conread position: 468-751
Cow position: chrX:6654739-6654440 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 216
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 72, 156

Conread position: 468-751
Cow position: chrX:10916326-10916615 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 275

Conread position: 468-758
Cow position: chrX:12810692-12810987 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 213
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 20, 13

Conread position: 468-758
Cow position: chrX:48247259-48246968 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 217
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 64, 148

Conread position: 468-770
Cow position: chrX:11975909-11975614 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 72

Conread position: 468-778
Cow position: chrX:47219677-47219366 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 0

Conread position: 468-806
Cow position: chrX:6906244-6905902 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 241
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 72, 48

Conread position: 468-811
Cow position: chrX:3079009-3078666 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 69

Conread position: 468-817
Cow position: chrX:33827460-33827093 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 242
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 8, 98

Conread position: 468-831
Cow position: chrX:21626382-21626007 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 256
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 60, 362

Conread position: 468-836
Cow position: chrX:23047358-23047726 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 69

Conread position: 468-837
Cow position: chrX:19674226-19674596 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 69

Conread position: 468-851
Cow position: chrX:48370673-48371055 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 309

Conread position: 468-854
Cow position: chrX:21415666-21416059 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 357

Conread position: 468-854
Cow position: chrX:40545032-40544642 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 226

Conread position: 468-854
Cow position: chrX:42171721-42171335 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 172

Conread position: 468-860
Cow position: chrX:14599114-14599500 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 117

Conread position: 468-860
Cow position: chrX:27442974-27442588 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 169

Conread position: 468-860
Cow position: chrX:38967229-38967615 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 158

Conread position: 469-609
Cow position: chrX:48014070-48014214 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 469-629
Cow position: chrX:16689110-16689270 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 469-669
Cow position: chrX:19842303-19842106 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 121
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 192, 164

Conread position: 469-799
Cow position: chrX:14134760-14135091 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 68

Conread position: 469-807
Cow position: chrX:30919817-30919474 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 238
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 64, 23

Conread position: 469-810
Cow position: chrX:19495381-19495038 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 68

Conread position: 469-860
Cow position: chrX:18695347-18694957 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 293

Conread position: 470-587
Cow position: chrX:22564037-22563922 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 470-661
Cow position: chrX:32419770-32419957 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 154
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 94, 9

Conread position: 470-688
Cow position: chrX:22284088-22284316 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 59, 0

Conread position: 470-747
Cow position: chrX:42142053-42141780 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 190
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 57, 173

Conread position: 470-817
Cow position: chrX:40581566-40581915 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 248
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 10, 25

Conread position: 470-860
Cow position: chrX:1616477-1616077 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 358

Conread position: 471-746
Cow position: chrX:23034471-23034753 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 184
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 61, 0

Conread position: 471-751
Cow position: chrX:19772038-19771765 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 168

Conread position: 471-764
Cow position: chrX:21063879-21064158 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 14

Conread position: 471-836
Cow position: chrX:15093947-15094314 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 148
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 190, 0

Conread position: 471-851
Cow position: chrX:38442543-38442925 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 66

Conread position: 472-654
Cow position: chrX:38641783-38641959 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 472-684
Cow position: chrX:36351455-36351668 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 123
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 7, 135

Conread position: 472-859
Cow position: chrX:13868279-13868669 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 165

Conread position: 473-754
Cow position: chrX:15341449-15341173 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 206
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 67, 42

Conread position: 473-780
Cow position: chrX:41433835-41433533 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 215
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 189, 34

Conread position: 474-635
Cow position: chrX:28878671-28878509 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 116, 61

Conread position: 474-660
Cow position: chrX:16416046-16416244 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 152
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 68, 38

Conread position: 474-752
Cow position: chrX:19540771-19540485 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 184
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 474-807
Cow position: chrX:14262252-14261908 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 221
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 63, 99

Conread position: 474-836
Cow position: chrX:31450036-31449674 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 49

Conread position: 474-852
Cow position: chrX:11581521-11581904 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 92

Conread position: 475-727
Cow position: chrX:2079668-2079398 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 183
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 475-799
Cow position: chrX:45467635-45467309 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 62

Conread position: 475-828
Cow position: chrX:2362083-2362437 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 63

Conread position: 475-862
Cow position: chrX:34663275-34662879 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 252
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 73, 63

Conread position: 476-686
Cow position: chrX:34006899-34007110 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 61

Conread position: 476-759
Cow position: chrX:38577118-38577402 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 476-860
Cow position: chrX:32010617-32011003 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 360

Conread position: 477-748
Cow position: chrX:21495345-21495617 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 204

Conread position: 477-851
Cow position: chrX:47211265-47210885 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 347

Conread position: 477-860
Cow position: chrX:28097718-28098079 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 265
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 30, 60

Conread position: 478-595
Cow position: chrX:4963655-4963538 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 69, 59

Conread position: 478-657
Cow position: chrX:6277873-6277689 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 48, 91

Conread position: 478-686
Cow position: chrX:5856929-5856716 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 52, 20

Conread position: 479-608
Cow position: chrX:48021002-48020872 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 82, 0

Conread position: 479-665
Cow position: chrX:14050395-14050583 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 149
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 68, 58

Conread position: 479-770
Cow position: chrX:10992207-10992499 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 58

Conread position: 479-860
Cow position: chrX:44737402-44737018 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 197

Conread position: 480-600
Cow position: chrX:42242883-42242764 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 80, 0

Conread position: 480-658
Cow position: chrX:4943417-4943236 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 59, 0

Conread position: 480-661
Cow position: chrX:25568789-25568609 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 143
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 148, 167

Conread position: 480-751
Cow position: chrX:40106101-40105829 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 182
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 213

Conread position: 480-801
Cow position: chrX:20888054-20887738 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 201

Conread position: 480-806
Cow position: chrX:17282405-17282072 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 218
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 43, 272

Conread position: 480-823
Cow position: chrX:48224598-48224254 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 281

Conread position: 480-860
Cow position: chrX:8796841-8797220 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 120

Conread position: 480-860
Cow position: chrX:13971637-13971255 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 57

Conread position: 481-686
Cow position: chrX:43199021-43199232 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 16, 39

Conread position: 482-754
Cow position: chrX:2499747-2499475 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 25

Conread position: 482-828
Cow position: chrX:39174621-39174278 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 200

Conread position: 482-831
Cow position: chrX:16529597-16529948 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 201

Conread position: 482-854
Cow position: chrX:34376546-34376907 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 56

Conread position: 482-860
Cow position: chrX:828472-828859 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 55

Conread position: 483-758
Cow position: chrX:29723044-29723317 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 57

Conread position: 484-632
Cow position: chrX:4177651-4177798 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 39, 0

Conread position: 484-808
Cow position: chrX:7341398-7341732 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 225
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 42, 23

Conread position: 484-823
Cow position: chrX:15504885-15505226 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 53

Conread position: 484-827
Cow position: chrX:44851686-44852033 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 20

Conread position: 484-831
Cow position: chrX:25452144-25452485 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 109

Conread position: 486-807
Cow position: chrX:39700810-39701144 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 223
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 49, 17

Conread position: 487-801
Cow position: chrX:47984755-47985067 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 200
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 41, 148

Conread position: 487-807
Cow position: chrX:37377662-37377348 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 220
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 175, 55

Conread position: 487-836
Cow position: chrX:10495830-10496181 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 50

Conread position: 487-836
Cow position: chrX:15590275-15589927 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 205

Conread position: 487-851
Cow position: chrX:44557676-44558042 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 50

Conread position: 487-852
Cow position: chrX:6413643-6414007 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 239

Conread position: 487-860
Cow position: chrX:29066049-29066409 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 50

Conread position: 487-862
Cow position: chrX:42587832-42587460 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 249

Conread position: 487-867
Cow position: chrX:12776389-12776007 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 296

Conread position: 488-650
Cow position: chrX:45599301-45599139 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 45, 37

Conread position: 488-660
Cow position: chrX:33519177-33519349 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 488-746
Cow position: chrX:117632-117376 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 180
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 40, 89

Conread position: 488-790
Cow position: chrX:5455102-5454809 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 201
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 174, 39

Conread position: 488-853
Cow position: chrX:30543689-30543328 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 19

Conread position: 488-853
Cow position: chrX:45674442-45674808 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 251
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 60, 116

Conread position: 488-854
Cow position: chrX:7054134-7053769 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 52

Conread position: 488-862
Cow position: chrX:10831914-10831525 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 344

Conread position: 489-640
Cow position: chrX:44839781-44839932 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 489-781
Cow position: chrX:9593536-9593243 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 48

Conread position: 489-781
Cow position: chrX:36678074-36677776 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 210
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 44, 143

Conread position: 489-806
Cow position: chrX:8661354-8661675 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 212
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 50, 202

Conread position: 489-832
Cow position: chrX:22821013-22821358 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 192

Conread position: 489-860
Cow position: chrX:19196919-19196546 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 48

Conread position: 489-869
Cow position: chrX:15147582-15147209 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 49

Conread position: 490-758
Cow position: chrX:31275800-31275526 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 187
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 42, 68

Conread position: 490-838
Cow position: chrX:24125462-24125123 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 80

Conread position: 490-851
Cow position: chrX:48248419-48248786 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 252
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 58, 278

Conread position: 491-820
Cow position: chrX:44907917-44908245 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 239
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 171, 120

Conread position: 492-648
Cow position: chrX:48221320-48221164 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 492-665
Cow position: chrX:17010700-17010527 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 139
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 55, 45

Conread position: 492-673
Cow position: chrX:17933729-17933916 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 16, 132

Conread position: 492-733
Cow position: chrX:37205315-37205573 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 183
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 50, 241

Conread position: 492-791
Cow position: chrX:47991199-47991493 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 196
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 7, 119

Conread position: 492-807
Cow position: chrX:38668038-38667704 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 226
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 44, 318

Conread position: 492-808
Cow position: chrX:37299195-37299515 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 222
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 50, 22

Conread position: 492-815
Cow position: chrX:126387-126713 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 276

Conread position: 492-854
Cow position: chrX:23024305-23024667 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 200

Conread position: 492-860
Cow position: chrX:36373146-36373532 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 0

Conread position: 492-869
Cow position: chrX:21749856-21749489 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 99

Conread position: 493-807
Cow position: chrX:46448231-46447914 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 224
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 56, 140

Conread position: 493-837
Cow position: chrX:23583161-23583506 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 298

Conread position: 493-851
Cow position: chrX:14409784-14409424 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 44

Conread position: 494-808
Cow position: chrX:40155850-40155517 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 225
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 9, 0

Conread position: 494-811
Cow position: chrX:21795099-21795413 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 44

Conread position: 495-648
Cow position: chrX:41083508-41083663 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 27, 0

Conread position: 496-661
Cow position: chrX:46721184-46721013 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 81, 0

Conread position: 496-667
Cow position: chrX:12671881-12671709 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 137
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 165, 0

Conread position: 496-688
Cow position: chrX:28542276-28542083 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 44

Conread position: 496-748
Cow position: chrX:40602570-40602821 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 41

Conread position: 496-754
Cow position: chrX:13363879-13363613 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 183
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 27, 186

Conread position: 496-754
Cow position: chrX:19847382-19847118 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 177
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 52

Conread position: 496-810
Cow position: chrX:15561209-15560892 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 41

Conread position: 496-829
Cow position: chrX:5112950-5112615 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 41

Conread position: 496-854
Cow position: chrX:32584205-32583847 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 44

Conread position: 496-860
Cow position: chrX:20617191-20616825 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 41

Conread position: 497-805
Cow position: chrX:32978650-32978341 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 236

Conread position: 497-860
Cow position: chrX:25741507-25741142 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 40

Conread position: 497-863
Cow position: chrX:32309701-32310075 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 263
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 35, 196

Conread position: 498-743
Cow position: chrX:7695372-7695613 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 186
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 163, 101

Conread position: 498-756
Cow position: chrX:22325680-22325943 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 193
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 34, 77

Conread position: 498-819
Cow position: chrX:42508035-42507720 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 18

Conread position: 499-660
Cow position: chrX:27288139-27287971 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 499-854
Cow position: chrX:34401607-34401959 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 112

Conread position: 499-860
Cow position: chrX:42247566-42247219 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 500-608
Cow position: chrX:2962519-2962411 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 48, 37

Conread position: 500-853
Cow position: chrX:25946232-25945872 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 145

Conread position: 500-868
Cow position: chrX:38218328-38218685 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 0

Conread position: 501-853
Cow position: chrX:21062828-21063181 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 99

Conread position: 501-854
Cow position: chrX:25419553-25419196 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 242
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 16, 164

Conread position: 501-860
Cow position: chrX:5739602-5739241 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 36

Conread position: 502-621
Cow position: chrX:10399607-10399726 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 45, 35

Conread position: 502-820
Cow position: chrX:2300537-2300854 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 229
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 39, 260

Conread position: 502-860
Cow position: chrX:43979230-43979592 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 35

Conread position: 503-810
Cow position: chrX:34095174-34095483 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 34

Conread position: 503-836
Cow position: chrX:32188746-32188415 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 239

Conread position: 504-810
Cow position: chrX:23235444-23235752 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 33

Conread position: 505-836
Cow position: chrX:37497832-37497499 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 32

Conread position: 505-854
Cow position: chrX:34192296-34192632 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 119

Conread position: 506-719
Cow position: chrX:8325876-8326088 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 154, 164

Conread position: 506-831
Cow position: chrX:16722201-16721866 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 271

Conread position: 507-646
Cow position: chrX:41198703-41198842 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 116
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 36, 31

Conread position: 507-743
Cow position: chrX:31373195-31373427 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 112

Conread position: 507-863
Cow position: chrX:7718469-7718827 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 134

Conread position: 507-868
Cow position: chrX:47386314-47385952 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 247
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 42, 30

Conread position: 508-854
Cow position: chrX:40648283-40648612 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 253
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 9, 130

Conread position: 510-810
Cow position: chrX:7509757-7510057 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 27

Conread position: 510-860
Cow position: chrX:47054891-47054560 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 234
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 177, 31

Conread position: 510-861
Cow position: chrX:7178528-7178866 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 256
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 24, 131

Conread position: 511-648
Cow position: chrX:45228438-45228303 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 511-860
Cow position: chrX:25035765-25035412 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 124

Conread position: 512-752
Cow position: chrX:17691883-17692123 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 177
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 149, 51

Conread position: 512-851
Cow position: chrX:41743535-41743870 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 169

Conread position: 512-869
Cow position: chrX:33855618-33855257 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 95

Conread position: 513-826
Cow position: chrX:19290395-19290700 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 179

Conread position: 513-854
Cow position: chrX:16289939-16289596 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 307

Conread position: 514-640
Cow position: chrX:6262806-6262681 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 514-836
Cow position: chrX:46606874-46606565 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 229
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 147, 45

Conread position: 514-854
Cow position: chrX:9096291-9096631 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 26

Conread position: 514-855
Cow position: chrX:22578536-22578197 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 238
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 34, 23

Conread position: 514-862
Cow position: chrX:5292267-5291918 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 221
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 154, 162

Conread position: 515-851
Cow position: chrX:45399875-45399533 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 239
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 9, 252

Conread position: 516-656
Cow position: chrX:11412161-11412022 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 125, 0

Conread position: 516-754
Cow position: chrX:12179594-12179832 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 178
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 145, 162

Conread position: 516-830
Cow position: chrX:30141699-30141376 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 224
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 146, 311

Conread position: 516-860
Cow position: chrX:11718152-11717821 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 49

Conread position: 516-861
Cow position: chrX:11844612-11844281 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 121

Conread position: 517-751
Cow position: chrX:27616465-27616696 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 174
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 141, 0

Conread position: 517-852
Cow position: chrX:47343919-47344253 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 265

Conread position: 517-860
Cow position: chrX:28105553-28105887 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 0

Conread position: 517-869
Cow position: chrX:17271663-17271307 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 236
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 19, 44

Conread position: 520-640
Cow position: chrX:16542076-16541956 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 520-660
Cow position: chrX:46044650-46044788 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 18, 0

Conread position: 520-668
Cow position: chrX:41167398-41167250 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 128, 17

Conread position: 520-810
Cow position: chrX:47362256-47361964 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 17

Conread position: 520-836
Cow position: chrX:47170471-47170788 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 212
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 141, 33

Conread position: 520-859
Cow position: chrX:5118853-5118536 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 241
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 94, 118

Conread position: 520-862
Cow position: chrX:31250022-31250356 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 71

Conread position: 521-642
Cow position: chrX:40184004-40183882 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 103
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 117, 0

Conread position: 521-770
Cow position: chrX:10718141-10718390 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 190
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 26, 16

Conread position: 521-811
Cow position: chrX:48205286-48204990 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 175

Conread position: 521-861
Cow position: chrX:30950159-30950501 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 16

Conread position: 523-691
Cow position: chrX:11583510-11583344 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 134
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 29, 0

Conread position: 523-752
Cow position: chrX:45945263-45945490 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 175
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 15, 123

Conread position: 523-759
Cow position: chrX:5640986-5640763 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 179
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 133, 0

Conread position: 523-805
Cow position: chrX:30863566-30863282 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 14

Conread position: 523-815
Cow position: chrX:48490251-48489956 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 212
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 138, 113

Conread position: 524-857
Cow position: chrX:11806383-11806049 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 82

Conread position: 525-640
Cow position: chrX:22866885-22866770 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 525-748
Cow position: chrX:30338284-30338065 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 156
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 70, 63

Conread position: 526-649
Cow position: chrX:41673511-41673634 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 32, 118

Conread position: 526-669
Cow position: chrX:1823698-1823842 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 18, 11

Conread position: 526-770
Cow position: chrX:6828771-6829017 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 182
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 21, 11

Conread position: 526-773
Cow position: chrX:27982509-27982262 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 179
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 135, 152

Conread position: 526-801
Cow position: chrX:39386629-39386354 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 200
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 136, 123

Conread position: 526-810
Cow position: chrX:30538516-30538230 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 11

Conread position: 526-810
Cow position: chrX:36240031-36240317 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 11

Conread position: 526-810
Cow position: chrX:39548966-39549252 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 11

Conread position: 526-810
Cow position: chrX:48328751-48328465 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 11

Conread position: 526-823
Cow position: chrX:36479568-36479867 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 0

Conread position: 526-827
Cow position: chrX:39071319-39071629 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 211
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 116, 215

Conread position: 526-836
Cow position: chrX:30899752-30899439 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 11

Conread position: 526-836
Cow position: chrX:48165159-48165471 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 11

Conread position: 526-860
Cow position: chrX:15578005-15577669 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 11

Conread position: 526-860
Cow position: chrX:44980401-44980065 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 234
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 21, 11

Conread position: 526-867
Cow position: chrX:29508419-29508757 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 11

Conread position: 526-869
Cow position: chrX:34502559-34502901 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 111

Conread position: 527-808
Cow position: chrX:25283503-25283235 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 0

Conread position: 527-810
Cow position: chrX:43767899-43767615 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 10

Conread position: 527-860
Cow position: chrX:18999538-18999856 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 239
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 134, 15

Conread position: 528-722
Cow position: chrX:11614359-11614554 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 152
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 133, 0

Conread position: 528-807
Cow position: chrX:630655-630392 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 191
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 218, 42

Conread position: 528-807
Cow position: chrX:25848553-25848834 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 197
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 122, 158

Conread position: 528-808
Cow position: chrX:6659013-6659294 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 205
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 60, 72

Conread position: 528-851
Cow position: chrX:2786908-2786600 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 223
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 130, 146

Conread position: 529-688
Cow position: chrX:40321266-40321428 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 131
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 121, 0

Conread position: 529-754
Cow position: chrX:27450391-27450156 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 161
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 83, 110

Conread position: 529-762
Cow position: chrX:27677991-27678226 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 165
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 25, 8

Conread position: 529-794
Cow position: chrX:15304682-15304419 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 182
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 132, 40

Conread position: 529-851
Cow position: chrX:11561781-11562114 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 218
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 8, 183

Conread position: 529-862
Cow position: chrX:45932644-45932977 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 223
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 131, 7

Conread position: 530-758
Cow position: chrX:23192731-23192508 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 157
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 131, 18

Conread position: 530-808
Cow position: chrX:7381964-7382238 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 77

Conread position: 530-816
Cow position: chrX:29877541-29877252 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 208
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 17, 7

Conread position: 530-836
Cow position: chrX:39731153-39731461 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 7

Conread position: 530-836
Cow position: chrX:45263428-45263121 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 215
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 131, 206

Conread position: 530-877
Cow position: chrX:20038579-20038228 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 242
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 17, 163

Conread position: 531-860
Cow position: chrX:35612903-35612573 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 231
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 16, 6

Conread position: 531-861
Cow position: chrX:14009012-14008680 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 172
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 16, 6

Conread position: 531-868
Cow position: chrX:37843361-37843698 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 131

Conread position: 532-661
Cow position: chrX:1514785-1514655 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 20, 0

Conread position: 533-805
Cow position: chrX:21255680-21255953 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 200
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 128, 158

Conread position: 533-861
Cow position: chrX:44096197-44096525 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 217
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 125, 7

Conread position: 534-854
Cow position: chrX:45089081-45089410 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 226
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 15, 6

Conread position: 535-754
Cow position: chrX:39954893-39954673 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 166
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 126, 0

Conread position: 537-851
Cow position: chrX:34333554-34333237 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 537-860
Cow position: chrX:44387636-44387957 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 223
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 10, 100

Conread position: 538-707
Cow position: chrX:47177947-47177777 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 116, 99

Conread position: 538-831
Cow position: chrX:20029894-20030195 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 222
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 13, 224

Conread position: 539-773
Cow position: chrX:26754136-26753901 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 165
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 122, 0

Conread position: 539-829
Cow position: chrX:22567181-22567473 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 198
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 122, 0

Conread position: 540-660
Cow position: chrX:40693110-40692990 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 540-663
Cow position: chrX:32012406-32012283 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 540-678
Cow position: chrX:18455793-18455933 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 126, 0

Conread position: 540-808
Cow position: chrX:46771322-46771053 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 216

Conread position: 540-860
Cow position: chrX:14846425-14846102 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 153

Conread position: 541-686
Cow position: chrX:20954255-20954401 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 118
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 120, 0

Conread position: 543-672
Cow position: chrX:23091459-23091586 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 105, 0

Conread position: 543-751
Cow position: chrX:30784516-30784726 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 146
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 12, 95

Conread position: 543-852
Cow position: chrX:41403614-41403938 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 229
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 120, 0

Conread position: 543-852
Cow position: chrX:41410162-41410486 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 229
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 120, 0

Conread position: 544-649
Cow position: chrX:22821667-22821772 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 544-658
Cow position: chrX:47715432-47715546 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 544-687
Cow position: chrX:44983635-44983491 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 108, 117

Conread position: 544-763
Cow position: chrX:39187712-39187492 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 152
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 118, 21

Conread position: 544-775
Cow position: chrX:32747312-32747546 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 0

Conread position: 544-808
Cow position: chrX:19689869-19690136 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 43

Conread position: 544-808
Cow position: chrX:22873051-22873317 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 187
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 105, 0

Conread position: 544-812
Cow position: chrX:47743732-47743996 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 180
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 166, 15

Conread position: 544-820
Cow position: chrX:9227330-9227050 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 203
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 117, 142

Conread position: 544-837
Cow position: chrX:29048687-29048965 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 203
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 117, 19

Conread position: 544-851
Cow position: chrX:31436134-31436436 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 212

Conread position: 544-851
Cow position: chrX:47967254-47967559 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 117

Conread position: 544-854
Cow position: chrX:20945222-20945526 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 148

Conread position: 544-860
Cow position: chrX:25232240-25232558 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 215
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 100, 222

Conread position: 544-860
Cow position: chrX:42492876-42492550 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 241
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 116, 233

Conread position: 544-861
Cow position: chrX:32171228-32170920 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 229
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 117, 195

Conread position: 544-867
Cow position: chrX:35803466-35803794 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 290

Conread position: 545-661
Cow position: chrX:9417098-9416982 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 545-689
Cow position: chrX:45851586-45851732 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 122
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 71, 0

Conread position: 545-754
Cow position: chrX:21844289-21844502 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 163
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 116, 137

Conread position: 545-836
Cow position: chrX:24577910-24577617 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 168
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 117, 0

Conread position: 545-854
Cow position: chrX:7508782-7509103 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 220
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 104, 35

Conread position: 545-854
Cow position: chrX:44731255-44731559 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 204
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 101, 0

Conread position: 546-754
Cow position: chrX:9346801-9347005 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 114, 80

Conread position: 546-754
Cow position: chrX:37079883-37079674 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 0

Conread position: 546-773
Cow position: chrX:31839165-31839393 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 153
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 116, 0

Conread position: 546-810
Cow position: chrX:11725611-11725341 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 192
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 107, 150

Conread position: 546-810
Cow position: chrX:36820576-36820310 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 191
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 115, 0

Conread position: 546-811
Cow position: chrX:11860586-11860320 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 0

Conread position: 546-860
Cow position: chrX:47481456-47481769 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 220
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 111, 58

Conread position: 546-867
Cow position: chrX:24758041-24757717 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 225
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 115, 274

Conread position: 547-838
Cow position: chrX:31443163-31442876 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 62

Conread position: 547-860
Cow position: chrX:23215764-23216079 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 216
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 114, 0

Conread position: 548-836
Cow position: chrX:48310082-48309796 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 195
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 153, 23

Conread position: 549-837
Cow position: chrX:26492660-26492951 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 205
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 16, 0

Conread position: 549-860
Cow position: chrX:30686937-30686621 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 216
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 112, 0

Conread position: 549-861
Cow position: chrX:36778064-36778380 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 0

Conread position: 549-864
Cow position: chrX:7645917-7646227 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 113

Conread position: 550-810
Cow position: chrX:24966929-24967191 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 187
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 111, 0

Conread position: 550-861
Cow position: chrX:48227958-48227640 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 209
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 54, 251

Conread position: 551-746
Cow position: chrX:43114833-43115027 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 147
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 38, 109

Conread position: 551-854
Cow position: chrX:2425461-2425156 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 141

Conread position: 552-854
Cow position: chrX:40558014-40557720 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 194

Conread position: 552-862
Cow position: chrX:43527164-43527478 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 211

Conread position: 553-722
Cow position: chrX:34006479-34006308 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 108, 0

Conread position: 553-758
Cow position: chrX:11904663-11904456 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 144
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 11, 0

Conread position: 553-837
Cow position: chrX:42855073-42855359 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 90

Conread position: 553-867
Cow position: chrX:13196308-13195991 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 218
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 109, 0

Conread position: 554-810
Cow position: chrX:23452934-23452676 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 186
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 107, 0

Conread position: 554-836
Cow position: chrX:2812745-2812464 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 195
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 108, 9

Conread position: 555-746
Cow position: chrX:12021939-12022128 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 134
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 106, 177

Conread position: 555-867
Cow position: chrX:17605896-17605581 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 176
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 107, 0

Conread position: 556-847
Cow position: chrX:26619695-26619407 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 193
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 106, 34

Conread position: 556-864
Cow position: chrX:6234768-6234478 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 222
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 259, 34

Conread position: 556-869
Cow position: chrX:38007102-38006788 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 248

Conread position: 558-694
Cow position: chrX:30337227-30337365 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 559-852
Cow position: chrX:10306342-10306634 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 216
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 153, 85

Conread position: 560-746
Cow position: chrX:8103423-8103236 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 102, 0

Conread position: 560-777
Cow position: chrX:30060861-30060643 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 101, 0

Conread position: 560-836
Cow position: chrX:29083795-29084068 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 192
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 101, 77

Conread position: 560-860
Cow position: chrX:5638498-5638201 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 73

Conread position: 560-861
Cow position: chrX:34454344-34454632 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 218
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 101, 36

Conread position: 561-766
Cow position: chrX:27419311-27419105 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 142
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 84, 112

Conread position: 561-836
Cow position: chrX:29844805-29844528 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 192
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 100, 0

Conread position: 562-746
Cow position: chrX:32214799-32214614 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 143
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 100, 0

Conread position: 562-766
Cow position: chrX:26289011-26288804 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 142
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 100, 0

Conread position: 562-805
Cow position: chrX:21217915-21217678 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 163
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 100, 19

Conread position: 562-867
Cow position: chrX:12850804-12851112 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 210
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 99, 211

Conread position: 563-762
Cow position: chrX:33205319-33205119 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 0

Conread position: 563-792
Cow position: chrX:23080966-23081192 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 161
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 98, 117

Conread position: 564-836
Cow position: chrX:15008758-15008486 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 197
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 97, 257

Conread position: 564-847
Cow position: chrX:15545571-15545848 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 122

Conread position: 564-867
Cow position: chrX:29356261-29356567 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 210
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 97, 0

Conread position: 565-807
Cow position: chrX:27458930-27459175 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 182
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 95, 133

Conread position: 570-689
Cow position: chrX:14018807-14018926 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 90, 15

Conread position: 570-727
Cow position: chrX:36311279-36311433 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 91, 102

Conread position: 570-836
Cow position: chrX:43101208-43101475 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 186
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 91, 5

Conread position: 570-860
Cow position: chrX:20580072-20579779 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 165
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 92, 151

Conread position: 571-748
Cow position: chrX:616722-616547 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 148
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 91, 65

Conread position: 572-801
Cow position: chrX:36364901-36365131 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 163
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 15, 90

Conread position: 572-806
Cow position: chrX:20376652-20376878 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 166
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 90, 71

Conread position: 572-836
Cow position: chrX:39667511-39667245 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 185
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 89, 0

Conread position: 573-688
Cow position: chrX:10348151-10348035 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 100
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 88, 0

Conread position: 573-727
Cow position: chrX:9044173-9044020 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 113
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 89, 54

Conread position: 573-748
Cow position: chrX:45420992-45420814 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 87, 0

Conread position: 573-785
Cow position: chrX:12826430-12826643 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 149
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 87, 0

Conread position: 573-810
Cow position: chrX:3658371-3658132 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 172
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 88, 0

Conread position: 573-831
Cow position: chrX:16783177-16783430 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 189
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 87, 116

Conread position: 573-836
Cow position: chrX:27469971-27469706 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 189
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 88, 0

Conread position: 573-854
Cow position: chrX:9161271-9161546 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 186
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 88, 108

Conread position: 573-860
Cow position: chrX:28157170-28157465 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 217
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 88, 15

Conread position: 574-860
Cow position: chrX:28845528-28845798 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 209
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 75, 109

Conread position: 575-806
Cow position: chrX:25713494-25713710 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 162
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 575-829
Cow position: chrX:42779441-42779185 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 183
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 86, 0

Conread position: 575-836
Cow position: chrX:39704390-39704642 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 189
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 87, 35

Conread position: 575-860
Cow position: chrX:33639653-33639940 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 208
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 75, 32

Conread position: 575-877
Cow position: chrX:14152530-14152231 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 211
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 86, 200

Conread position: 576-859
Cow position: chrX:19188622-19188904 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 204

Conread position: 576-867
Cow position: chrX:42165761-42166055 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 199
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 85, 0

Conread position: 577-733
Cow position: chrX:37129010-37129163 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 84, 60

Conread position: 577-860
Cow position: chrX:3895289-3895004 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 194
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 83, 0

Conread position: 577-860
Cow position: chrX:4404222-4404504 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 198
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 84, 239

Conread position: 578-746
Cow position: chrX:45973992-45973823 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 120
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 84, 0

Conread position: 580-695
Cow position: chrX:170259-170143 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 82, 0

Conread position: 580-747
Cow position: chrX:45465924-45466101 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 83, 134

Conread position: 580-754
Cow position: chrX:47930094-47930271 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 71, 0

Conread position: 580-801
Cow position: chrX:5507364-5507586 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 156
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 19, 71

Conread position: 580-860
Cow position: chrX:7350992-7351267 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 57

Conread position: 581-805
Cow position: chrX:25618227-25617996 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 160
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 80, 0

Conread position: 581-845
Cow position: chrX:23061145-23061398 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 196
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 81, 100

Conread position: 581-861
Cow position: chrX:14924691-14924968 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 117

Conread position: 581-867
Cow position: chrX:30021407-30021118 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 197
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 81, 0

Conread position: 582-836
Cow position: chrX:12032663-12032919 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 177
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 80, 0

Conread position: 582-860
Cow position: chrX:20709767-20710042 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 197
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 227, 60

Conread position: 582-871
Cow position: chrX:6038230-6037936 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 196
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 79, 110

Conread position: 583-751
Cow position: chrX:45410350-45410180 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 134
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 46, 0

Conread position: 583-766
Cow position: chrX:48135187-48135007 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 73, 0

Conread position: 583-818
Cow position: chrX:38794418-38794653 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 163
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 15, 183

Conread position: 583-871
Cow position: chrX:21011629-21011335 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 199
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 59, 54

Conread position: 584-860
Cow position: chrX:33466311-33466577 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 199
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 77, 88

Conread position: 585-735
Cow position: chrX:47854684-47854537 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 77, 52

Conread position: 585-764
Cow position: chrX:5919165-5919345 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 43, 87

Conread position: 585-851
Cow position: chrX:45414605-45414342 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 194
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 76, 115

Conread position: 586-808
Cow position: chrX:5047201-5046989 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 74, 111

Conread position: 590-862
Cow position: chrX:33020186-33020452 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 91

Conread position: 591-802
Cow position: chrX:48456644-48456432 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 145
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 71, 0

Conread position: 591-851
Cow position: chrX:14221784-14222042 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 189
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 70, 81

Conread position: 591-853
Cow position: chrX:35273045-35273315 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 193
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 70, 250

Conread position: 592-773
Cow position: chrX:41238661-41238482 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 70, 89

Conread position: 592-806
Cow position: chrX:20561898-20562105 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 151
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 182, 70

Conread position: 592-852
Cow position: chrX:19015144-19015397 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 196
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 70, 152

Conread position: 593-810
Cow position: chrX:35497789-35498008 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 69, 0

Conread position: 594-770
Cow position: chrX:41886091-41885914 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 67, 0

Conread position: 594-851
Cow position: chrX:754662-754921 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 185
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 67, 226

Conread position: 594-862
Cow position: chrX:43983874-43984146 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 191
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 17, 230

Conread position: 595-831
Cow position: chrX:23451466-23451226 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 171
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 66, 0

Conread position: 595-836
Cow position: chrX:23264732-23264489 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 179
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 66, 97

Conread position: 595-854
Cow position: chrX:18194618-18194877 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 183
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 65, 156

Conread position: 597-851
Cow position: chrX:158063-157816 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 175
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 7, 81

Conread position: 597-852
Cow position: chrX:22482982-22482727 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 185
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 65, 172

Conread position: 597-866
Cow position: chrX:25237885-25238150 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 83

Conread position: 599-813
Cow position: chrX:48675785-48675996 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 41, 100

Conread position: 599-860
Cow position: chrX:35041931-35042192 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 192
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 63, 38

Conread position: 600-808
Cow position: chrX:4269357-4269152 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 156
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 62, 32

Conread position: 600-815
Cow position: chrX:39347076-39346860 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 62, 82

Conread position: 600-836
Cow position: chrX:24903794-24904032 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 161
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 62, 0

Conread position: 600-852
Cow position: chrX:44835106-44834850 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 173
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 62, 191

Conread position: 601-742
Cow position: chrX:42928071-42927933 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 80, 60

Conread position: 601-822
Cow position: chrX:31556787-31556564 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 152
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 61, 219

Conread position: 602-744
Cow position: chrX:31294828-31294690 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 116
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 58, 0

Conread position: 603-861
Cow position: chrX:48195328-48195070 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 183
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 61, 165

Conread position: 604-852
Cow position: chrX:46723027-46722775 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 186
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 58, 0

Conread position: 604-854
Cow position: chrX:46033004-46032759 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 183
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 57, 77

Conread position: 604-868
Cow position: chrX:16808042-16807775 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 180
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 35, 236

Conread position: 606-854
Cow position: chrX:38102728-38102481 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 177
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 56, 74

Conread position: 607-823
Cow position: chrX:10293445-10293227 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 149
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 54, 0

Conread position: 607-869
Cow position: chrX:2467597-2467861 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 54

Conread position: 608-860
Cow position: chrX:16762490-16762736 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 188
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 41, 53

Conread position: 609-754
Cow position: chrX:25587155-25587300 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 53, 83

Conread position: 609-823
Cow position: chrX:29907510-29907295 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 145
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 53, 28

Conread position: 609-836
Cow position: chrX:1749790-1749561 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 156
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 53, 0

Conread position: 609-854
Cow position: chrX:42874697-42874945 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 184
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 52, 72

Conread position: 609-860
Cow position: chrX:37836308-37836556 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 179
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 53, 28

Conread position: 610-823
Cow position: chrX:22915185-22915401 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 145
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 6, 0

Conread position: 610-850
Cow position: chrX:8730799-8731044 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 173
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 51, 0

Conread position: 610-854
Cow position: chrX:9997611-9997374 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 186
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 52, 25

Conread position: 610-860
Cow position: chrX:40647698-40647953 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 185
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 40, 52

Conread position: 612-762
Cow position: chrX:47247189-47247036 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 612-810
Cow position: chrX:33983884-33983684 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 136
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 612-823
Cow position: chrX:23703043-23702830 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 148
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 33, 25

Conread position: 612-836
Cow position: chrX:34175476-34175250 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 153
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 612-851
Cow position: chrX:36931040-36931278 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 158
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 50, 77

Conread position: 612-860
Cow position: chrX:26709326-26709576 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 169
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 612-862
Cow position: chrX:8925428-8925669 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 179
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 88, 37

Conread position: 613-769
Cow position: chrX:35413353-35413512 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 128
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 49, 0

Conread position: 613-860
Cow position: chrX:12017998-12018259 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 187
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 49, 135

Conread position: 613-868
Cow position: chrX:27751512-27751258 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 173
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 49, 79

Conread position: 614-754
Cow position: chrX:12314078-12314219 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 614-808
Cow position: chrX:16531723-16531912 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 148
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 48, 68

Conread position: 614-837
Cow position: chrX:48800261-48800483 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 148
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 203, 189

Conread position: 615-851
Cow position: chrX:22549029-22549267 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 156
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 615-854
Cow position: chrX:7496974-7497201 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 166
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 615-860
Cow position: chrX:2963775-2964021 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 167
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 47, 66

Conread position: 617-792
Cow position: chrX:5856596-5856424 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 45, 60

Conread position: 617-836
Cow position: chrX:37416348-37416129 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 45, 137

Conread position: 617-873
Cow position: chrX:16835204-16835460 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 168
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 45, 205

Conread position: 618-860
Cow position: chrX:488218-488459 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 162
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 41, 62

Conread position: 620-851
Cow position: chrX:17725708-17725932 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 169
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 40, 75

Conread position: 621-748
Cow position: chrX:45955912-45956039 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 40

Conread position: 622-863
Cow position: chrX:17541696-17541934 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 39, 59

Conread position: 622-869
Cow position: chrX:45404102-45403848 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 174
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 40, 145

Conread position: 623-836
Cow position: chrX:19333436-19333221 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 149
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 39, 0

Conread position: 623-860
Cow position: chrX:2580132-2580371 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 154
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 623-861
Cow position: chrX:40183617-40183376 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 171
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 39, 235

Conread position: 623-866
Cow position: chrX:41414051-41413805 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 162
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 623-868
Cow position: chrX:22815674-22815923 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 168
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 39, 0

Conread position: 623-932
Cow position: chrX:5300625-5300935 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 198
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 40, 284

Conread position: 625-811
Cow position: chrX:46680190-46680004 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 134
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 36, 68

Conread position: 628-808
Cow position: chrX:45787393-45787566 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 33, 8

Conread position: 628-810
Cow position: chrX:27704515-27704331 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 631-860
Cow position: chrX:20151591-20151817 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 166
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 31, 123

Conread position: 631-860
Cow position: chrX:27509279-27509056 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 165
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 31, 131

Conread position: 632-862
Cow position: chrX:32020380-32020151 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 171
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 30, 135

Conread position: 634-860
Cow position: chrX:46425009-46424782 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 158
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 9, 60

Conread position: 637-751
Cow position: chrX:25816149-25816034 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 637-827
Cow position: chrX:48536919-48536728 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 20, 65

Conread position: 637-860
Cow position: chrX:41673850-41674077 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 155
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 27, 6

Conread position: 638-851
Cow position: chrX:678820-678608 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 148
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 24, 152

Conread position: 638-860
Cow position: chrX:23497915-23497701 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 167
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 24, 44

Conread position: 640-823
Cow position: chrX:27325035-27324850 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 129
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 640-851
Cow position: chrX:5288407-5288194 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 141
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 640-867
Cow position: chrX:2576194-2575969 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 153
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 163, 142

Conread position: 640-867
Cow position: chrX:22856782-22857012 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 153
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 641-860
Cow position: chrX:45425074-45424853 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 145
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 643-860
Cow position: chrX:9572276-9572495 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 144
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 643-860
Cow position: chrX:9976189-9976408 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 144
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 643-860
Cow position: chrX:27432166-27431947 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 19, 162

Conread position: 644-860
Cow position: chrX:41167208-41166997 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 169, 16

Conread position: 649-801
Cow position: chrX:20167963-20168115 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 12, 135

Conread position: 649-815
Cow position: chrX:6639885-6640047 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 38, 11

Conread position: 649-838
Cow position: chrX:21663070-21663256 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 130
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 649-858
Cow position: chrX:39938758-39938558 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 150
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 12, 29

Conread position: 649-860
Cow position: chrX:9416934-9416726 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 154
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 13, 113

Conread position: 649-860
Cow position: chrX:9635422-9635218 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 148
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 13, 113

Conread position: 650-794
Cow position: chrX:33519377-33519522 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 12, 0

Conread position: 650-821
Cow position: chrX:42499269-42499098 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 12, 119

Conread position: 650-851
Cow position: chrX:9855062-9855263 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 141
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 165, 12

Conread position: 650-851
Cow position: chrX:9953901-9954104 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 140
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 650-851
Cow position: chrX:21672311-21672514 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 12, 0

Conread position: 650-851
Cow position: chrX:34543547-34543746 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 12, 74

Conread position: 650-854
Cow position: chrX:619246-619043 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 168, 12

Conread position: 650-854
Cow position: chrX:23514258-23514054 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 161
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 12, 47

Conread position: 650-854
Cow position: chrX:33493535-33493738 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 141
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 12, 32

Conread position: 650-858
Cow position: chrX:23970151-23970347 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 165, 12

Conread position: 650-859
Cow position: chrX:16416270-16416475 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 153, 12

Conread position: 650-860
Cow position: chrX:11856189-11856395 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 160
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 13, 50

Conread position: 650-860
Cow position: chrX:41884658-41884447 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 149
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 13, 154

Conread position: 650-860
Cow position: chrX:42011040-42011246 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 146
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 12, 32

Conread position: 650-860
Cow position: chrX:43049104-43049316 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 148
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 34, 14

Conread position: 650-860
Cow position: chrX:44961507-44961716 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 148
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 12, 42

Conread position: 650-864
Cow position: chrX:2206784-2206579 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 159
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 12, 112

Conread position: 650-869
Cow position: chrX:26876121-26875907 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 162
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 12, 37

Conread position: 650-869
Cow position: chrX:27394252-27394043 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 210, 11

Conread position: 651-847
Cow position: chrX:4942988-4942800 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 155, 90

Conread position: 652-851
Cow position: chrX:11939160-11938969 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 142
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 155, 8

Conread position: 653-860
Cow position: chrX:7721748-7721956 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 122, 151

Conread position: 654-860
Cow position: chrX:2383253-2383456 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 8, 28

Conread position: 654-860
Cow position: chrX:38549212-38549414 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 155
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 8, 157

Conread position: 658-860
Cow position: chrX:46073053-46072853 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 143
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 29, 124

Conread position: 660-847
Cow position: chrX:22821818-22822005 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 132
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 117, 126

Conread position: 660-854
Cow position: chrX:42381329-42381141 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 146, 98

Conread position: 660-860
Cow position: chrX:6278735-6278533 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 146, 0

Conread position: 660-860
Cow position: chrX:17662826-17662626 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 155, 143

Conread position: 660-860
Cow position: chrX:37048810-37048610 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 139
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 31, 40

Conread position: 660-860
Cow position: chrX:40116196-40116388 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 155, 27

Conread position: 660-861
Cow position: chrX:48010365-48010568 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 142
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 37

Conread position: 660-863
Cow position: chrX:7513287-7513483 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 151, 35

Conread position: 660-864
Cow position: chrX:42339165-42338972 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 101, 0

Conread position: 660-869
Cow position: chrX:35542662-35542871 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 146
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 155, 143

Conread position: 661-838
Cow position: chrX:14900949-14900778 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 663-847
Cow position: chrX:22074574-22074754 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 98, 0

Conread position: 663-860
Cow position: chrX:13382098-13382297 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 140
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 37, 27

Conread position: 664-862
Cow position: chrX:29509669-29509473 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 144, 97

Conread position: 665-856
Cow position: chrX:16324187-16324001 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 138, 13

Conread position: 668-805
Cow position: chrX:23091660-23091793 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 93, 0

Conread position: 668-860
Cow position: chrX:11633457-11633647 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 132, 93

Conread position: 669-860
Cow position: chrX:29602053-29601863 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 18, 32

Conread position: 678-863
Cow position: chrX:29542430-29542250 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 132
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 137, 83

Conread position: 700-862
Cow position: chrX:23785464-23785631 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 117, 0

Show alignments to all cow chromosomes.